TCONS_00054632 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054632
Unique NameTCONS_00054632
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2042

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054632 ID=TCONS_00054632|Name=TCONS_00054632|organism=Clytia hemisphaerica|type=transcript|length=2042bp
tcaggagcaaaataaaaatgaatttaaaatttgaagcaCCTACCTTCTTG
CAATTTGCTATTATCATGTCATGTGTAAAACTGTTACTTCTAAATTCCTA
CAAATCAACTGATTTTGAAGTTCATCGTAATTGGCTGGCTATCACTTACA
CCTTACCTGTTTCTGAATGGTATTTTGAGGAGACTTCAGAATGGACACTT
GATTATCCGCCATTTTTCGCATGGTTTGAGTATGCTTTATCACAAGTTGC
AGTATATTTTGATGATCAAATGTTAGATCTTGACAATCTTGGTTATGACA
GTGTAAAAACTGTTCTCTTTCAGAGGCTATCTGTTATTGCGATGGACCTT
GTATTGTTATATTCACTTCACAAATTTTATGATCAACTGTTTCAAGGCAA
AGACGATGACAACACCAAGATGTTTTTACTTGTCTCGATATTTGCAAATT
CAGGATTGCTTTTAGTTGATCATATACATTTTCAATATAATGGCTTCCTA
TTTTCGTTTCTCCTGCTATCAATAACTGACATGTTGCAGGACAAGTTTTT
ACCAAGTGCCTTTTGGTTCACAGTGCTACTAAACTTCAAACACATCTTTC
TGTACATTGCCCCGTGCTACTTTGTGTACCTATTGAGGAATTATTGCTTC
CGCAGACCTATACAAAAAAGTTGGTTCACCATATTTGGCGTGGATATTCT
TCAATTGAGCATTTTCAATGTATTGAAACTTGCTTTTGTTGTTATTGGAG
TATTCATGATCTCTTTTGGACCTTTCATATACTTGGAACAAATCCCTCAA
GTTGTGTCACGTTTATTCCCTGTGAAAAGAGGCTTGTGTCATGCGTATTG
GGCGGCAAACTTTTGGGCGGTTTACGCTACAACTGATAAAGTGTTAACGA
TTGCTGGACCCAAACTCGGACTTCCAATATCGAAACAAAGTGATGTTGCT
TCTATGACAGGGGGTCTAGTAGCACAACAGAATTTCTCTGTTCTACCAAA
CATCCCTGCAATTGTAACTGGGATCGTAACTATTTTATTCATGTTGccAG
CGTTACTGAGAGTGTGGTATCGACCGTATTCAGTGAAAACGTTCTTACCA
TGTCTTACACTTTGTGCATACGCCTCATTCCTATTTGGTTATCACGTTCA
TGAGAAAGCTATTCTGCTGGTTGTTATACCGTTAACGTTGCTGGCTTTGT
TATCGTCCAAATACGCACGTGTATACATAGTTTTATCAATAACAGGACAT
TATGCCCTGTTTCCACTCCTTTATCAACCCGCAGAAACACCGCTGAAGAT
TCTAATTTTATTGCTTCCAAAATTGATCACACTGGCGCTACTAAAAAAAA
TACACAAgGTAGAGAACGGTTTCTTTGGACTTCCTTTTGTCACGTGGTAT
GAATCTTTATATTTATACGGACTCGCACCTCTATACCTTTACACAGAGTT
CGGACACCAAATATTGGGTTTCCAAGAGATACTACCCTTTGTTCCtctaa
tgatgacgtcattttattgTTCTATCGGAGTCATTTGGAGTTGGTTGTTG
TTATATTCTGACTTTTTACTTGAAGTGGAGAAAGAGGAACCGAAAAAGAA
GCAAGATGCTTCTTCTAATACGAAGCgtaaaactaaaaagaaaattcaat
agTTCCGAATAAAACGCACTGTATTTACAATAAACTCGGAGATATTTGAC
TTTGTTCTTAGACGTTTTCAAGgctatttataattttttttcactcgaAC
TTCGCCATATTCACAATTTGCTATCAATTATCAGAAGGTAGCAATCCATG
AAAGACTGCTTTTAACCAGTTTTAACGGAGTTTATCCATCTTATTAATTT
TATATCATTCTGATTAAGCTGTAGTTATGTAGGTCGCTTTTCATCGGCCA
TTATTTATGGAGaattttttatagaatttttaaatgattcggttgcaaat
tttgtattttagggTCAATTTTTATTGACATtgattatagaaagattttt
caaattctttaacAACAACCTTTTAAAactcttttgattttt
Run BLAST on NCBI

transcript from alignment at scaffold_243:379606..387940-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054632 ID=TCONS_00054632|Name=TCONS_00054632|organism=Clytia hemisphaerica|type=transcript|length=8335bp|location=Sequence derived from alignment at scaffold_243:379606..387940- (Clytia hemisphaerica)
TCAGGAGCAAAATAAAAATGAATTTAAAATTTGAAGCACCTACCTTCTTG
CAATTTGCTATTATCATGTCATGTGTAAAACTGTTACTTCTAAATTCCTA
GTAAGTAACCTTTATATATGCTTATACTTTTGCATCAGGCTTTGCGGTTT
CGAAATGTTTTATATTATATGCTTAGCCTTTTTTGCACAACTTTCGTGTA
AGTTTCTTTACTTTTGCTTACCTTTATTTTTCTAAGGGAATGAAGTGTAT
TCAAAGAGTTATAATGATTTTTTTTTGTTGTTGACTTCTGATTTATAAAT
TTTCTTCCTGTTTTAGCAAATCAACTGATTTTGAAGTTCATCGTAATTGG
CTGGCTATCACTTACACCTTACCTGTTTCTGAATGGTATTTTGAGGTAAT
TACAATTTTCTTCAATCACATTCTCAAAAACTATAGCATAATCCCCCAAA
TAAGTTCTTGCCAACCCAAAATTTATTATTTTGCAGGAAGTTAATTTTTG
GGATGGCGTAAAAATGAATTTATTACATGCTTTTTTCTAGCTCGTGCTGT
TTCAGGGAGTGTCAGACTATTTTTATAATAAATTCTGGCCAAAAATGTTC
TGAAACGGTCCAATTAATTTTTTTTCAATACATTAGCCATATTAAATTCA
AGTTGAAATTTCTTCCTTTTAAGTATAACTATAAGATTTATATTACATTA
TAATTATTTAGTCAATTAATTTTATCCAATTGACAATGGTTTCAAAAATT
AAAAACTTTCAAGAAATGTATCTTTGGTAAAAGATGTACAACTAAAATAG
TACTTTTGTCAAAAAGAAGATTGTAATTGGGCAACAATTGCTGCCTTATA
AATTGACTCTAATATTGCCAATTTAATTCGTCACAGGAGACTTCAGAATG
GACACTTGATTATCCGCCATTTTTCGCATGGTTTGAGTATGCTTTATCAC
AAGTTGCAGTATATTTTGATGATCAAATGTTAGATCTTGACAATCTTGGT
TATGACAGTGTAAAAACTGTTCTCTTTCAGAGGCTATCTGTTATTGCGAT
GGACCTTGTATTGTTATATTCACTTCACAAGTAAGTCAAGTTCTCAACAT
TATTAGCTTCATAACTTCCTATCATATTATTACTAGACTAGTAAACTAGT
CGGTTATTACTTATACTTATAATAAAACTGTCAATCAAATAATGTAAACA
CTAATTAAATATTCAGCGCGCATGAGAGAAAAGGAAAATAATCGACTAGA
AGCTTCTTCCAACGCCTTTTTTTCTTCACCTAAATTCGTACGGAGAGACA
TACAGATTTCTGTATGTCTGACCCGTGTGGGATTGCATTTATTTTTCTTT
CTGTTTATTGCATTTTTGGAAATGCTCATTTATTTATATGTTCCCATGTT
TGATGTTACTATGAAATATCATTTAGTCAAAAAAGTTGGATGTAGTCTCA
AAAAACTAAAAAAGGTTGTAAAATTAAACAACGTTTTTTGACGGCAGAAG
CTTCTAGTCGTTGAAATTCAGAAAAGACACGCAACCTCACCTCTTCGATT
CTTTTTATTTGGAGCTTGAATTTTTTGTATATGGGTCTGTTTTCAACGAC
TAGTTTACTAGTCTATATTATTACTGATTGAAACATCAGCCTTCAATTAT
CTTTTCACTGAAACGATAACTTTAACTTAATCTGGAATGTTGAAATTTTC
TAGATAGATATCAATGAGCCATTTCTGCTTAATAAATTAATTTTGCTACC
GTTCGCTTCAATGAAGAATAAAAAAACATTTACCATTCTATGGCTTTTAG
TTCTCTACCGTGCCACTAGTAGCCATAATTTCCTTTTCATATATTTCTTT
GATTTCGAAACTGGTCATTTCCTTGATCAACCCACTCAATATGTTGTTCA
AGGGAAATTTAAGTGCCAAACTTGAAGTCTACCATCTACCTGTAGATTCT
AGATTTTTTGTGTGTGATTATTAGTTTCCCTCTACAATAGATTTTATGAT
CAACTGTTTCAAGGCAAAGACGATGACAACACCAAGATGTTTTTACTTGT
CTCGATATTTGCAAATTCAGGATTGCTTTTAGTTGATCGTATCCTTTTCA
GTAAAAAAACAACCACGATAGGTACAGATGATATAGCTAGCCTTCTACCA
GTCTGGCCTATATCAGATGAAACATTAGGGGCTCGCATCCTGAAATGGTT
TGTATATTGCTTTATTCTAAGAATGGAATACATCAGAATCAAGTTACAAA
CCAAAATGATTAGAATGATAAGAATTTAGACTTTTTTCCATGGCGGTAAA
AATGGCCTTTTTTCTCCCACTTGCTCAGCAACCTGAGTAGGTTTTGTTGT
TTTTTGGACAAGCATATTGAGTATATACTCACAATTTTTGTTTCATCAAG
ATAAGAATTTAGACTTTTTGATTTGAAATGAATTTATTGATCTTGTGAAA
TATTAGCTTGATAATATAATTGTTAGTATATGTTTTTGATTTCCTTAATA
ATCAGTGTAATCATTAGATATACATTTTCAATATAATGGCTTCCTATTTT
CGTTTCTCCTGCTATCAATAACTGACATGTTGCAGGTTAGACTTATAATT
CCTTTTCTGATAAAAATGGGGCACTCGATTTCTATAAAACAGTGTACGTG
CTCCAATTAGTCTTTCAACGGACCCATGCAGCACAGCCCTTAATCTTTAA
AGGTTTCTAATATTGAAATTAATTACCAATGGCATAATTTATAATGTCTT
ATAACATTTTTTTCCTAAAAAATCAATAAAAGATCAATAAGTATAATCTG
TTAGTTAAAAGTTTTTGAATGAATTAATTGAACAAAATTTTTAACTTTAG
ATCTTTCTATGTTTGTGTAACTCAAGCACAAAATATTTTCTTATTTCTCC
CAGGACAAGTTTTTACCAAGTGCCTTTTGGTTCACAGTGCTACTAAACTT
CAAACACATCTTTCTGTACATTGCCCCGTGCTACTTTGTGTACCTATTGA
GGAATTATTGCTTCCGCAGACCTATACAAAAAAGTAAGTATCTTTTACCT
ATCCAATTTTTCTTTTTAGTAACCTACTGTTTGTAAAAGACTTTACTTTA
TGCTATAAATATTCAAATAAACTGTTCCTTCTTATGGATCCAGGACCCGG
GTATTCCCTCACCTGATATTCCAATGGTGGATTGGCGGCCACCCGAACCG
AAGCTCTAAAGGAGCGGAAAGGAATGATGGTCGTTTTCGAAGTGCCACAT
CCCAGCCTTGCGCGTAAACCTAAAAATATTCTGGTTGATCCCGTCAATCC
CCGAAAACGAAGGCTGGGTTACCAGGCCTCCCGCTGCAAGATCCTTCACT
TCCAGATGTTGAAAATTTTCCCGACCTTCAGAGTTTTAGCGTGTCGGATG
AAATCTCTGCATCTGGGAGCCAGATAAGGTATACCCAGATGTCAAAAGGC
AAAGTTTCTATTTTCCTGCGAATAAAGTGTAGAATTTGATGCCCTATTTG
AGTTTCTATCAACGGAATTTTTTATAGGTTGGTTCACCATATTTGGCGTG
GATATTCTTCAATTGAGCATTTTCAATGTATTGAAACTTGCTTTTGTTGT
TATTGGAGTATTCATGATCTCTTTTGGACCTTTCATATACTTGGTATGAT
AATACATTCAAGTTTTTCTTAGCAGACAAGAACATCATACTACTGATACA
CCCCCTTCTCACAGACCCATTGGGAACCCTTCCCACTGGAAAATTTGTCC
AAAGTATCGTCCCCGATGTTAAATTATCTTCCAATTTTTGTCCCCGCTGA
TAATAATCAAATAAACCAATCCTCACTGCAAAATATTATGCTATTTTCCC
ATCACTTTTTGTCCTCTGTTATGTCCTCCTTTTTGATGGATGGATGTATT
CTTTGTACATTTTTCCATAACGTACTTTTCTCAACTTCAGTTGAACTAAA
ATCTGAGAATGTTTGTGTGTGTTTGCCTGTGTGTCCGCCAAAAACTTCGA
GGCAGCCTAGAGGCTTCAAGAATGGTCGGATTTGGCTGAAATTTGGCACA
CTTGTTCCTTGGGTGGGGGTGTTTTTCCATTTTTTCCAAATTTTTGTTCA
TCGGGGCCTGGGTATTAACCTTTTGGTTTGTTTTGCTACAATCGGGCTAC
TGAGGTTAGCCCAGTGCCTTGGGCACGTTCGACTATTTTTTATTAAATGG
AAAATTTCATCAGATCTATAACATTTTTAGGCTTTTTCTTTTCTTTCGTG
CAGGTAAACTGAACATAATAATCTCTTCTCTTTTTAGGAACAAATCCCTC
AAGTTGTGTCACGTTTATTCCCTGTGAAAAGAGGCTTGTGTCATGCGTAT
TGGGCGGCAAACTTTTGGGCGGTTTACGCTACAACTGATAAAGTGTTAAC
GATTGCTGGTGAGTTGAGATTTATTCAAATGAGGGTTTTGCATAATTCGT
CTTGTTAATTAATAAATGGTAAGCTGGGAGCAAACCGTCAAACATGGCTC
TTCAAACATTTGAGCTTTTTATGTTTGATAGTTTGCGCGGACTCTTCAAA
CATTTTTTTAGCAATGTGACGTCTTCTTTTATAACGTCAGTTTTGGTTTG
GAATGGAAAACGTCAATAGAACGACTTCATATGTTTGAAGAAATTATGAA
CTTGCACAAACATTGTTTCAAACATTTTTGGAGATTTTTTTGTTGAAATG
ATACGAATTTTGACCCCGCAAACCATCCAACATCGATTTCAAACATGAAA
CGTCACGATGTTTGAAGAACAATGTTTGACGGTTTGCTCCCAGCTTTACA
ACAGGCTAGACAGGAAAAACTATCACCATTTTTAGGATCCTTTCCGATAA
GAAAAAAACACTACATTAGTTTCTTAAGAAACTACAACTTCTTGACTTAA
GTTGGCTGACCTTTCCTTCACCTTGTTATACTATATCAATATTATTAATT
TCACAACTTGGTTGTGGAAAATTTAATTTCCCTAATTCAAGCATTTATTC
TTGTCCACCTTTTTGGTAAACTGATCAACATTTCAATTATTTCACTCATT
TATAGGACCCAAACTCGGACTTCCAATATCGAAACAAAGTGATGTTGCTT
CTATGACAGGGGGTCTAGTAGCACAACAGAATTTCTCTGTTCTACCAAAC
ATCCCTGCAATTGTAACTGGGATCGTAACTATTTTATTCATGTTGGTAAG
AAACTTATATTCTTGTCTTTGTCAGCCATATAGACTTCTTGCTATCAATT
TGTAGGTTTTTTCGTTTTGAGTGTATTGCTATTAGATGCAGCTGACTCTC
GCTTATTCGAACTCGGACGGGGAATCTTATTTTGTTCGAATTACAGAGAG
ATTCTAATTAAAGAAAGTATTTCTCCTCGAATTGAAATTGGAAATTAGTT
CAAATAATAGAAATTCGAGTGTTGTATCCGCGAATAATGGCCATTTTCGC
GAAATTTAGTCCCTAAATCCCTGGTAAAAGTTAAGATTCAATTATTGTCG
AAAACCCCTTAGGGAAATGAAAGTGTCCAAAAGTGGCTGATCGGTGAAAT
TTATTCATTTAAAAGCTCTTTATATTTTTCTTCTTCAGCCAGCGTTACTG
AGAGTGTGGTATCGACCGTATTCAGTGAAAACGTTCTTACCATGTCTTAC
ACTTTGTGCATACGCCTCATTCCTATTTGGTTATCACGTTCATGAGAAAG
CTATTCTGCTGGTTGTTATACCGTTAACGTAAGTGACAGGTCCTCATTTT
ATCATTCTATCAATTTTCTTTCATTTGAAATCTGATTAAGATTATATTTT
TATCAGTTCTTTGGCCCCCGAAACACAGAAAGTGTTGATTTCAGAGCTTC
CATTTAAAATTTATTTTTATAATGCTAAGCAGAAATCTAGTTGTTATTTT
TTAGGGATCCTATATATATAATTCTTTAAAAAAATTAAAGGCAGCCTCCA
TCACATTCTCCTTGCCATCTTTCTTTATAGGTTGCTGGCTTTGTTATCGT
CCAAATACGCACGTGTATACATAGTTTTATCAATAACAGGACATTATGCC
CTGTTTCCACTCCTTTATCAACCCGCAGGTAATTCTTTTTAGGTGTAAGA
TCGTGCTTTAGTAAAACCTTCAGTGTAACTCAAGGATGGATTTTACAATC
TTTATTTTCGGCCAAAATGTGTTATTCTTTTATAACTATTGAAAGTGGTT
TAAAAAACATTTAAGTTTAGAAAGACTGCTTCTACTAAAATCTTTTTTTC
TGAAATTTCTGATGCTAAGATTTATAGAATAATTGATTCATTTATGTATT
TCATCTTTCAAACATATAGAAACACCGCTGAAGATTCTAATTTTATTGCT
TCCAAAATTGATCACACTGGCGCTACTAAAAAAAATACACAAGTAAGTGT
ACATGGGGCTTTATAAAGCTAGATTTCCCACAAATTTCAATGTCGATATT
TATTTCATTCAATAATGCTAAAAAATATTGTCATTTAAGATATTTGGTTG
GGGTTTAGAATATTATTCCACATAGGTTTTATCACTTTAGAGGTCTTGGC
TAAGACTTCTAACTGGGTGTGAATTTCTGTAATTTTTAGATGGATGGAAT
GTAAACAAAGTGTTACTGAAGATATAGTAGAAAATCTATCTTTCGTGTCT
TTCATGATATTCCATTGTTTTCCTTATCTATATTTTTCGATAATTCAATC
CAAATGATCAATCTGTGATGATACAGCCTTGCCCAGCTATTGCATATTTT
ATTTTTGCAATTTATTTTTTCCCTTGGTTTTACAGTGAATTGAACCATTC
TTGTTTGTATTCTCTTGTGGTCAATGAACAGTGGATAAAGTCTATCGTCT
CTTCCCAATATTCATGATTTTTTCACTGATTTAAACCTTCCCTTTTTCCG
CATTTACGTAGTTGGCTTCCACAAGTTTTGATTCTCTACCCATAATTATC
TCGTTGCCATGGTTTCAGTCCTTTTTTTAGAAACGAGGATGCGTCACTTC
TTTACTTATAGTTGACCTTTTCGCTTTTATATTATTGACCCTCAAAAAGA
ATTTGTCTGAAAATCCTTTTGTCTGGAAGATGAGGAAAACCCAATCTTAA
TTCTCAATAATCCAAATTCAAGCTAAATATTTTGCAGAATTTACCCACTT
TTTATCTCTATAACCTTTTACGAACATATCCATCCATCTTTAGTTCACTC
TGTGAGCATTTTATTTCATTGATAAAAGTTCTTCCCTTTCAGCGAGGTAT
AAAAAGAGGATTTTTTATTCTTCAGAAATCTGCATAATTCGCAAAGAATA
AGCGCTTATTTGCTTGTAAAATTCATTTTCCGTCTCATTACTAACCCACT
CGTCTTTAAAATCTTAAAGTCGGGAGTTTTTGGTATCTTGCAGGCTGATT
CTCAACTTCAATTGAACTAGATTCAGAGAAAGACTGCCTGTCTGACTATG
TATCCCAAAAGTTTTGGCCAGCCTAAACATGGTTGTTCCTTGGAATACCT
GGGAATGAGCTGCAGTTTTTATAAGATATTTCCACTAATTGCAGAAGCTA
CTATGTTACGACCTTCAATCTTTTATACAATTATTGTGTTCTGATATCTG
GACAAATAGTTAGATGTTTGAGTATTTATCCCTTCTTTTCTTTGTTTTAG
GGTAGAGAACGGTTTCTTTGGACTTCCTTTTGTCACGTGGTATGAATCTT
TATATTTATACGGACTCGCACCTCTATACCTTTACACAGAGTTCGGACAC
CAAATATTGGGTTTCCAAGAGATACTACCCTTTGTTCCTCTAATGATGAC
GTCATTTTATTGTTCTATCGGAGTCATTTGGAGTTGGTTGTTGTTATATT
CTGACTTTTTACTTGAAGTGGAGAAAGAGGAACCGAAAAAGAAGCAAGAT
GCTTCTTCTAATACGAAGCGTAAAACTAAAAAGAAAATTCAATAGTTCCG
AATAAAACGCACTGTATTTACAATAAACTCGGAGATATTTGACTTTGTTC
TTAGACGTTTTCAAGGCTATTTATAATTTTTTTTCACTCGAACTTCGCCA
TATTCACAATTTGCTATCAATTATCAGAAGGTAGCAATCCATGAAAGACT
GCTTTTAACCAGTTTTAACGGAGTTTATCCATCTTATTAATTTTATATCA
TTCTGATTAAGCTGTAGTTATGTAGGTCGCTTTTCATCGGCCATTATTTA
TGGAGAATTTTTTATAGAATTTTTAAATGATTCGGTTGCAAATTTTGTAT
TTTAGGGTCAATTTTTATTGACATTGATTATAGAAAGATTTTTCAAATTC
TTTAACAACAACCTTTTAAAACTCTTTTGATTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034417XLOC_034417Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054632-exon-scaffold_243-1575043694:387841..387940TCONS_00054632-exon-scaffold_243-1575043694:387841..387940Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1575043694:387546..387624TCONS_00054632-exon-scaffold_243-1575043694:387546..387624Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1575043694:386861..387054TCONS_00054632-exon-scaffold_243-1575043694:386861..387054Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1575043694:385853..385950TCONS_00054632-exon-scaffold_243-1575043694:385853..385950Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1575043694:385356..385423TCONS_00054632-exon-scaffold_243-1575043694:385356..385423Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1575043694:384908..385037TCONS_00054632-exon-scaffold_243-1575043694:384908..385037Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1575043694:384298..384413TCONS_00054632-exon-scaffold_243-1575043694:384298..384413Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1575043694:383533..383653TCONS_00054632-exon-scaffold_243-1575043694:383533..383653Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1575043694:382746..382885TCONS_00054632-exon-scaffold_243-1575043694:382746..382885Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1575043694:382213..382352TCONS_00054632-exon-scaffold_243-1575043694:382213..382352Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1575043694:381863..381960TCONS_00054632-exon-scaffold_243-1575043694:381863..381960Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1575043694:381549..381621TCONS_00054632-exon-scaffold_243-1575043694:381549..381621Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1575043694:379606..380290TCONS_00054632-exon-scaffold_243-1575043694:379606..380290Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1510915933:387841..387940TCONS_00054632-exon-scaffold_243-1510915933:387841..387940Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1510915933:387546..387624TCONS_00054632-exon-scaffold_243-1510915933:387546..387624Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1510915933:386861..387054TCONS_00054632-exon-scaffold_243-1510915933:386861..387054Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1510915933:385853..385950TCONS_00054632-exon-scaffold_243-1510915933:385853..385950Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1510915933:385356..385423TCONS_00054632-exon-scaffold_243-1510915933:385356..385423Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1510915933:384908..385037TCONS_00054632-exon-scaffold_243-1510915933:384908..385037Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1510915933:384298..384413TCONS_00054632-exon-scaffold_243-1510915933:384298..384413Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1510915933:383533..383653TCONS_00054632-exon-scaffold_243-1510915933:383533..383653Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1510915933:382746..382885TCONS_00054632-exon-scaffold_243-1510915933:382746..382885Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1510915933:382213..382352TCONS_00054632-exon-scaffold_243-1510915933:382213..382352Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1510915933:381863..381960TCONS_00054632-exon-scaffold_243-1510915933:381863..381960Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1510915933:381549..381621TCONS_00054632-exon-scaffold_243-1510915933:381549..381621Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1510915933:379606..380290TCONS_00054632-exon-scaffold_243-1510915933:379606..380290Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1491911889:387841..387940TCONS_00054632-exon-scaffold_243-1491911889:387841..387940Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1491911889:387546..387624TCONS_00054632-exon-scaffold_243-1491911889:387546..387624Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1491911889:386861..387054TCONS_00054632-exon-scaffold_243-1491911889:386861..387054Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1491911889:385853..385950TCONS_00054632-exon-scaffold_243-1491911889:385853..385950Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1491911889:385356..385423TCONS_00054632-exon-scaffold_243-1491911889:385356..385423Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1491911889:384908..385037TCONS_00054632-exon-scaffold_243-1491911889:384908..385037Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1491911889:384298..384413TCONS_00054632-exon-scaffold_243-1491911889:384298..384413Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1491911889:383533..383653TCONS_00054632-exon-scaffold_243-1491911889:383533..383653Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1491911889:382746..382885TCONS_00054632-exon-scaffold_243-1491911889:382746..382885Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1491911889:382213..382352TCONS_00054632-exon-scaffold_243-1491911889:382213..382352Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1491911889:381863..381960TCONS_00054632-exon-scaffold_243-1491911889:381863..381960Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1491911889:381549..381621TCONS_00054632-exon-scaffold_243-1491911889:381549..381621Clytia hemisphaericaexon
TCONS_00054632-exon-scaffold_243-1491911889:379606..380290TCONS_00054632-exon-scaffold_243-1491911889:379606..380290Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_243supercontigscaffold_243:379606..387940 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.131549	0.894304	0.669713	1.74877	0.304066	0.0668624	3.87936e-07	0.859448	1.62342	0.626594	0.0010582	5.66039	6.31301	5.27157	0.912067	0.310071	0.000118191	2.12501	3.18971	1.99729e-07	0.000125363	0.0805622	0.407934	0.000289758	0.000551522	0.196984	5.91652e-08	5.49836	0.636272	1.09856
Blast
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BLAST of TCONS_00054632 vs. Swiss-Prot (Human)
Match: ALG8 (Probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase OS=Homo sapiens GN=ALG8 PE=1 SV=2)

HSP 1 Score: 425.246 bits (1092), Expect = 1.942e-140
Identity = 248/513 (48.34%), Postives = 341/513 (66.47%), Query Frame = 3 
Query:   45 FLQFAIIMSCVKLLLLNSYKSTDFEVHRNWLAITYTLPVSEWYFEETSEWTLDYPPFFAWFEYALSQVAVYFDDQMLDLDNLGYDSVKTVLFQRLSVIAMDLVLLYSLH---KFYDQLFQGKD-DDNTKMFLLVSIFANSGLLLVDHIHFQYNGFLFSFLLLSITDMLQDKFLPSAFWFTVLLNFKHIFLYIAPCYFVYLLRNYCFRRPIQKSWFTIFGVDILQLSIFNVLKLAFVVIGVFMISFGPFIYLEQIPQVVSRLFPVKRGLCHAYWAANFWAVYATTDKVLTIAGPKLGLPISKQSDVASMTGGLVAQQNFSVLPNIPAIVTGIVTILFMLPALLRVWYRPYSVKTFLPCLTLCAYASFLFGYHVHEKXXXXXXXXXXXXXXXSSKYARVYIVLSITGHYALFPLLYQPAEXXXXXXXXXXXXXXXXXXXXXXHKVENGFFGLPFVTWYESXXXXXXXXXXXXTEFGHQILGFQEILPFVPLMMTSFYCSIGVIWSWLLLYSDFLL 1571
            F   A+ ++ +K LL+ +Y STDFEVHRNWLAIT++LP+S+WY+E TSEWTLDYPPFFAWFEY LS VA YFD +ML++ NL Y S +T+LFQR SVI MD++ +Y++    K  D    GK+  +  K  L V +  N GLL+VDHIHFQYNGFLF  +LLSI  + Q + +  AF F VLL+FKHI+LY+AP Y VYLLR+YCF             +     S   V+ L  VV  V  +S GPF+ L Q+PQV SRLFP KRGLCHAYWA NFWA+Y   DKVL++ G KL          ASMT GLV Q   +VLP++  + T I T++ +LP++  +W++P   + FL CLTLCA +SF+FG+HVHEKAILL ++P++LL++  +  A ++++L+ TGHY+LFPLL+   E P+KIL++LL  + +++ LK + + E      P   W E+ YL GL PL +  EF      ++   PF+PL++TS YC++G+ ++W  LY   L+
Sbjct:   14 FSALALGVTLLKCLLIPTYHSTDFEVHRNWLAITHSLPISQWYYEATSEWTLDYPPFFAWFEYILSHVAKYFDQEMLNVHNLNYSSSRTLLFQRFSVIFMDVLFVYAVRECCKCIDGKKVGKELTEKPKFILSVLLLWNFGLLIVDHIHFQYNGFLFGLMLLSIARLFQKRHMEGAFLFAVLLHFKHIYLYVAPAYGVYLLRSYCFTANKPDG-----SIRWKSFSFVRVISLGLVVFLVSALSLGPFLALNQLPQVFSRLFPFKRGLCHAYWAPNFWALYNALDKVLSVIGLKLKFLDPNNIPKASMTSGLVQQFQHTVLPSVTPLATLICTLIAILPSIFCLWFKPQGPRGFLRCLTLCALSSFMFGWHVHEKAILLAILPMSLLSVGKAGDASIFLILTTTGHYSLFPLLFTAPELPIKILLMLLFTIYSISSLKTLFRKEK-----PLFNWMETFYLLGLGPLEVCCEFVFPFTSWKVKYPFIPLLLTSVYCAVGITYAWFKLYVSVLI 516
The following BLAST results are available for this feature:
BLAST of TCONS_00054632 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ALG81.942e-14048.34Probable dolichyl pyrophosphate Glc1Man9GlcNAc2 al... [more]
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