TCONS_00054633 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00054633
Unique Name	TCONS_00054633
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2045

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_243:379606..388683-

transcript sequence

>TCONS_00054633 ID=TCONS_00054633|Name=TCONS_00054633|organism=Clytia hemisphaerica|type=transcript|length=2045bp
atttcaggagcaaaataaaaatgaatttaaaatttgaagcaCCTACCTTC
TTGCAATTTGCTATTATCATGTCATGTGTAAAACTGTTACTTCTAAATTC
CTACAAATCAACTGATTTTGAAGTTCATCGTAATTGGCTGGCTATCACTT
ACACCTTACCTGTTTCTGAATGGTATTTTGAGGAGACTTCAGAATGGACA
CTTGATTATCCGCCATTTTTCGCATGGTTTGAGTATGCTTTATCACAAGT
TGCAGTATATTTTGATGATCAAATGTTAGATCTTGACAATCTTGGTTATG
ACAGTGTAAAAACTGTTCTCTTTCAGAGGCTATCTGTTATTGCGATGGAC
CTTGTATTGTTATATTCACTTCACAAATTTTATGATCAACTGTTTCAAGG
CAAAGACGATGACAACACCAAGATGTTTTTACTTGTCTCGATATTTGCAA
ATTCAGGATTGCTTTTAGTTGATCATATACATTTTCAATATAATGGCTTC
CTATTTTCGTTTCTCCTGCTATCAATAACTGACATGTTGCAGGACAAGTT
TTTACCAAGTGCCTTTTGGTTCACAGTGCTACTAAACTTCAAACACATCT
TTCTGTACATTGCCCCGTGCTACTTTGTGTACCTATTGAGGAATTATTGC
TTCCGCAGACCTATACAAAAAAGTTGGTTCACCATATTTGGCGTGGATAT
TCTTCAATTGAGCATTTTCAATGTATTGAAACTTGCTTTTGTTGTTATTG
GAGTATTCATGATCTCTTTTGGACCTTTCATATACTTGGAACAAATCCCT
CAAGTTGTGTCACGTTTATTCCCTGTGAAAAGAGGCTTGTGTCATGCGTA
TTGGGCGGCAAACTTTTGGGCGGTTTACGCTACAACTGATAAAGTGTTAA
CGATTGCTGGACCCAAACTCGGACTTCCAATATCGAAACAAAGTGATGTT
GCTTCTATGACAGGGGGTCTAGTAGCACAACAGAATTTCTCTGTTCTACC
AAACATCCCTGCAATTGTAACTGGGATCGTAACTATTTTATTCATGTTGc
cAGCGTTACTGAGAGTGTGGTATCGACCGTATTCAGTGAAAACGTTCTTA
CCATGTCTTACACTTTGTGCATACGCCTCATTCCTATTTGGTTATCACGT
TCATGAGAAAGCTATTCTGCTGGTTGTTATACCGTTAACGTTGCTGGCTT
TGTTATCGTCCAAATACGCACGTGTATACATAGTTTTATCAATAACAGGA
CATTATGCCCTGTTTCCACTCCTTTATCAACCCGCAGAAACACCGCTGAA
GATTCTAATTTTATTGCTTCCAAAATTGATCACACTGGCGCTACTAAAAA
AAATACACAAgGTAGAGAACGGTTTCTTTGGACTTCCTTTTGTCACGTGG
TATGAATCTTTATATTTATACGGACTCGCACCTCTATACCTTTACACAGA
GTTCGGACACCAAATATTGGGTTTCCAAGAGATACTACCCTTTGTTCCtc
taatgatgacgtcattttattgTTCTATCGGAGTCATTTGGAGTTGGTTG
TTGTTATATTCTGACTTTTTACTTGAAGTGGAGAAAGAGGAACCGAAAAA
GAAGCAAGATGCTTCTTCTAATACGAAGCgtaaaactaaaaagaaaattc
aatagTTCCGAATAAAACGCACTGTATTTACAATAAACTCGGAGATATTT
GACTTTGTTCTTAGACGTTTTCAAGgctatttataattttttttcactcg
aACTTCGCCATATTCACAATTTGCTATCAATTATCAGAAGGTAGCAATCC
ATGAAAGACTGCTTTTAACCAGTTTTAACGGAGTTTATCCATCTTATTAA
TTTTATATCATTCTGATTAAGCTGTAGTTATGTAGGTCGCTTTTCATCGG
CCATTATTTATGGAGaattttttatagaatttttaaatgattcggttgca
aattttgtattttagggTCAATTTTTATTGACATtgattatagaaagatt
tttcaaattctttaacAACAACCTTTTAAAactcttttgattttt

Run BLAST on NCBI

transcript from alignment at scaffold_243:379606..388683-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00054633 ID=TCONS_00054633|Name=TCONS_00054633|organism=Clytia hemisphaerica|type=transcript|length=9078bp|location=Sequence derived from alignment at scaffold_243:379606..388683- (Clytia hemisphaerica)
ATTTCAGGAGCAAAATAAAAATGAATTTAAAATTTGAAGCACCTACCTTC
TTGCAATTTGCTATTATCATGTCATGTGTAAAACTGTTACTTCTAAATTC
CTAGTAAGTAACCTTTATATATGCTTATACTTTTGCATCAGGCTTTGCGG
TTTCGAAATGTTTTATATTATATGCTTAGCCTTTTTTGCACAACTTTCGT
GTAAGTTACTTTACTTTTGCTTACCTTTATTTTTCTAAGGGAATGAAGTG
TATTCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGGGATAAAAACTTTATAATACCGAAA
TTTCGAGGCAAAAATTCACGGGTTTCCGATACCGAAACAATTTCAGAATT
CCGAAATACCGAAAGAATTTTGCCGGATTTACGAAATTCCGAAGAAAAAA
GGGTCGATTTCCGCAATTCCGTAAAACCGTACGCCCCCCACTTATATTAA
TTAAATTGATGAAGGTGAATGTTTTAACAAACTTCTTTTTATTTCAGGAG
CAAAATAAAAATGAATTTAAAATTTGAAGCACCTACCTTCTTGCAATTTG
CTATTATCATGTCATGTGTAAAACTGTTACTTCTAAATTCCTAGTAAGTA
ACCTTTATATATGCTTATACTTTTGCATCAGGCTTTGCGGTTTCGAAATG
TTTTATATTATATGCTTAGCCTTTTTTGCACAACTTTCGTGTAAGTTTCT
TTACTTTTGCTTACCTTTATTTTTCTAAGGGAATGAAGTGTATTCAAAGA
GTTATAATGATTTTTTTTTGTTGTTGACTTCTGATTTATAAATTTTCTTC
CTGTTTTAGCAAATCAACTGATTTTGAAGTTCATCGTAATTGGCTGGCTA
TCACTTACACCTTACCTGTTTCTGAATGGTATTTTGAGGTAATTACAATT
TTCTTCAATCACATTCTCAAAAACTATAGCATAATCCCCCAAATAAGTTC
TTGCCAACCCAAAATTTATTATTTTGCAGGAAGTTAATTTTTGGGATGGC
GTAAAAATGAATTTATTACATGCTTTTTTCTAGCTCGTGCTGTTTCAGGG
AGTGTCAGACTATTTTTATAATAAATTCTGGCCAAAAATGTTCTGAAACG
GTCCAATTAATTTTTTTTCAATACATTAGCCATATTAAATTCAAGTTGAA
ATTTCTTCCTTTTAAGTATAACTATAAGATTTATATTACATTATAATTAT
TTAGTCAATTAATTTTATCCAATTGACAATGGTTTCAAAAATTAAAAACT
TTCAAGAAATGTATCTTTGGTAAAAGATGTACAACTAAAATAGTACTTTT
GTCAAAAAGAAGATTGTAATTGGGCAACAATTGCTGCCTTATAAATTGAC
TCTAATATTGCCAATTTAATTCGTCACAGGAGACTTCAGAATGGACACTT
GATTATCCGCCATTTTTCGCATGGTTTGAGTATGCTTTATCACAAGTTGC
AGTATATTTTGATGATCAAATGTTAGATCTTGACAATCTTGGTTATGACA
GTGTAAAAACTGTTCTCTTTCAGAGGCTATCTGTTATTGCGATGGACCTT
GTATTGTTATATTCACTTCACAAGTAAGTCAAGTTCTCAACATTATTAGC
TTCATAACTTCCTATCATATTATTACTAGACTAGTAAACTAGTCGGTTAT
TACTTATACTTATAATAAAACTGTCAATCAAATAATGTAAACACTAATTA
AATATTCAGCGCGCATGAGAGAAAAGGAAAATAATCGACTAGAAGCTTCT
TCCAACGCCTTTTTTTCTTCACCTAAATTCGTACGGAGAGACATACAGAT
TTCTGTATGTCTGACCCGTGTGGGATTGCATTTATTTTTCTTTCTGTTTA
TTGCATTTTTGGAAATGCTCATTTATTTATATGTTCCCATGTTTGATGTT
ACTATGAAATATCATTTAGTCAAAAAAGTTGGATGTAGTCTCAAAAAACT
AAAAAAGGTTGTAAAATTAAACAACGTTTTTTGACGGCAGAAGCTTCTAG
TCGTTGAAATTCAGAAAAGACACGCAACCTCACCTCTTCGATTCTTTTTA
TTTGGAGCTTGAATTTTTTGTATATGGGTCTGTTTTCAACGACTAGTTTA
CTAGTCTATATTATTACTGATTGAAACATCAGCCTTCAATTATCTTTTCA
CTGAAACGATAACTTTAACTTAATCTGGAATGTTGAAATTTTCTAGATAG
ATATCAATGAGCCATTTCTGCTTAATAAATTAATTTTGCTACCGTTCGCT
TCAATGAAGAATAAAAAAACATTTACCATTCTATGGCTTTTAGTTCTCTA
CCGTGCCACTAGTAGCCATAATTTCCTTTTCATATATTTCTTTGATTTCG
AAACTGGTCATTTCCTTGATCAACCCACTCAATATGTTGTTCAAGGGAAA
TTTAAGTGCCAAACTTGAAGTCTACCATCTACCTGTAGATTCTAGATTTT
TTGTGTGTGATTATTAGTTTCCCTCTACAATAGATTTTATGATCAACTGT
TTCAAGGCAAAGACGATGACAACACCAAGATGTTTTTACTTGTCTCGATA
TTTGCAAATTCAGGATTGCTTTTAGTTGATCGTATCCTTTTCAGTAAAAA
AACAACCACGATAGGTACAGATGATATAGCTAGCCTTCTACCAGTCTGGC
CTATATCAGATGAAACATTAGGGGCTCGCATCCTGAAATGGTTTGTATAT
TGCTTTATTCTAAGAATGGAATACATCAGAATCAAGTTACAAACCAAAAT
GATTAGAATGATAAGAATTTAGACTTTTTTCCATGGCGGTAAAAATGGCC
TTTTTTCTCCCACTTGCTCAGCAACCTGAGTAGGTTTTGTTGTTTTTTGG
ACAAGCATATTGAGTATATACTCACAATTTTTGTTTCATCAAGATAAGAA
TTTAGACTTTTTGATTTGAAATGAATTTATTGATCTTGTGAAATATTAGC
TTGATAATATAATTGTTAGTATATGTTTTTGATTTCCTTAATAATCAGTG
TAATCATTAGATATACATTTTCAATATAATGGCTTCCTATTTTCGTTTCT
CCTGCTATCAATAACTGACATGTTGCAGGTTAGACTTATAATTCCTTTTC
TGATAAAAATGGGGCACTCGATTTCTATAAAACAGTGTACGTGCTCCAAT
TAGTCTTTCAACGGACCCATGCAGCACAGCCCTTAATCTTTAAAGGTTTC
TAATATTGAAATTAATTACCAATGGCATAATTTATAATGTCTTATAACAT
TTTTTTCCTAAAAAATCAATAAAAGATCAATAAGTATAATCTGTTAGTTA
AAAGTTTTTGAATGAATTAATTGAACAAAATTTTTAACTTTAGATCTTTC
TATGTTTGTGTAACTCAAGCACAAAATATTTTCTTATTTCTCCCAGGACA
AGTTTTTACCAAGTGCCTTTTGGTTCACAGTGCTACTAAACTTCAAACAC
ATCTTTCTGTACATTGCCCCGTGCTACTTTGTGTACCTATTGAGGAATTA
TTGCTTCCGCAGACCTATACAAAAAAGTAAGTATCTTTTACCTATCCAAT
TTTTCTTTTTAGTAACCTACTGTTTGTAAAAGACTTTACTTTATGCTATA
AATATTCAAATAAACTGTTCCTTCTTATGGATCCAGGACCCGGGTATTCC
CTCACCTGATATTCCAATGGTGGATTGGCGGCCACCCGAACCGAAGCTCT
AAAGGAGCGGAAAGGAATGATGGTCGTTTTCGAAGTGCCACATCCCAGCC
TTGCGCGTAAACCTAAAAATATTCTGGTTGATCCCGTCAATCCCCGAAAA
CGAAGGCTGGGTTACCAGGCCTCCCGCTGCAAGATCCTTCACTTCCAGAT
GTTGAAAATTTTCCCGACCTTCAGAGTTTTAGCGTGTCGGATGAAATCTC
TGCATCTGGGAGCCAGATAAGGTATACCCAGATGTCAAAAGGCAAAGTTT
CTATTTTCCTGCGAATAAAGTGTAGAATTTGATGCCCTATTTGAGTTTCT
ATCAACGGAATTTTTTATAGGTTGGTTCACCATATTTGGCGTGGATATTC
TTCAATTGAGCATTTTCAATGTATTGAAACTTGCTTTTGTTGTTATTGGA
GTATTCATGATCTCTTTTGGACCTTTCATATACTTGGTATGATAATACAT
TCAAGTTTTTCTTAGCAGACAAGAACATCATACTACTGATACACCCCCTT
CTCACAGACCCATTGGGAACCCTTCCCACTGGAAAATTTGTCCAAAGTAT
CGTCCCCGATGTTAAATTATCTTCCAATTTTTGTCCCCGCTGATAATAAT
CAAATAAACCAATCCTCACTGCAAAATATTATGCTATTTTCCCATCACTT
TTTGTCCTCTGTTATGTCCTCCTTTTTGATGGATGGATGTATTCTTTGTA
CATTTTTCCATAACGTACTTTTCTCAACTTCAGTTGAACTAAAATCTGAG
AATGTTTGTGTGTGTTTGCCTGTGTGTCCGCCAAAAACTTCGAGGCAGCC
TAGAGGCTTCAAGAATGGTCGGATTTGGCTGAAATTTGGCACACTTGTTC
CTTGGGTGGGGGTGTTTTTCCATTTTTTCCAAATTTTTGTTCATCGGGGC
CTGGGTATTAACCTTTTGGTTTGTTTTGCTACAATCGGGCTACTGAGGTT
AGCCCAGTGCCTTGGGCACGTTCGACTATTTTTTATTAAATGGAAAATTT
CATCAGATCTATAACATTTTTAGGCTTTTTCTTTTCTTTCGTGCAGGTAA
ACTGAACATAATAATCTCTTCTCTTTTTAGGAACAAATCCCTCAAGTTGT
GTCACGTTTATTCCCTGTGAAAAGAGGCTTGTGTCATGCGTATTGGGCGG
CAAACTTTTGGGCGGTTTACGCTACAACTGATAAAGTGTTAACGATTGCT
GGTGAGTTGAGATTTATTCAAATGAGGGTTTTGCATAATTCGTCTTGTTA
ATTAATAAATGGTAAGCTGGGAGCAAACCGTCAAACATGGCTCTTCAAAC
ATTTGAGCTTTTTATGTTTGATAGTTTGCGCGGACTCTTCAAACATTTTT
TTAGCAATGTGACGTCTTCTTTTATAACGTCAGTTTTGGTTTGGAATGGA
AAACGTCAATAGAACGACTTCATATGTTTGAAGAAATTATGAACTTGCAC
AAACATTGTTTCAAACATTTTTGGAGATTTTTTTGTTGAAATGATACGAA
TTTTGACCCCGCAAACCATCCAACATCGATTTCAAACATGAAACGTCACG
ATGTTTGAAGAACAATGTTTGACGGTTTGCTCCCAGCTTTACAACAGGCT
AGACAGGAAAAACTATCACCATTTTTAGGATCCTTTCCGATAAGAAAAAA
ACACTACATTAGTTTCTTAAGAAACTACAACTTCTTGACTTAAGTTGGCT
GACCTTTCCTTCACCTTGTTATACTATATCAATATTATTAATTTCACAAC
TTGGTTGTGGAAAATTTAATTTCCCTAATTCAAGCATTTATTCTTGTCCA
CCTTTTTGGTAAACTGATCAACATTTCAATTATTTCACTCATTTATAGGA
CCCAAACTCGGACTTCCAATATCGAAACAAAGTGATGTTGCTTCTATGAC
AGGGGGTCTAGTAGCACAACAGAATTTCTCTGTTCTACCAAACATCCCTG
CAATTGTAACTGGGATCGTAACTATTTTATTCATGTTGGTAAGAAACTTA
TATTCTTGTCTTTGTCAGCCATATAGACTTCTTGCTATCAATTTGTAGGT
TTTTTCGTTTTGAGTGTATTGCTATTAGATGCAGCTGACTCTCGCTTATT
CGAACTCGGACGGGGAATCTTATTTTGTTCGAATTACAGAGAGATTCTAA
TTAAAGAAAGTATTTCTCCTCGAATTGAAATTGGAAATTAGTTCAAATAA
TAGAAATTCGAGTGTTGTATCCGCGAATAATGGCCATTTTCGCGAAATTT
AGTCCCTAAATCCCTGGTAAAAGTTAAGATTCAATTATTGTCGAAAACCC
CTTAGGGAAATGAAAGTGTCCAAAAGTGGCTGATCGGTGAAATTTATTCA
TTTAAAAGCTCTTTATATTTTTCTTCTTCAGCCAGCGTTACTGAGAGTGT
GGTATCGACCGTATTCAGTGAAAACGTTCTTACCATGTCTTACACTTTGT
GCATACGCCTCATTCCTATTTGGTTATCACGTTCATGAGAAAGCTATTCT
GCTGGTTGTTATACCGTTAACGTAAGTGACAGGTCCTCATTTTATCATTC
TATCAATTTTCTTTCATTTGAAATCTGATTAAGATTATATTTTTATCAGT
TCTTTGGCCCCCGAAACACAGAAAGTGTTGATTTCAGAGCTTCCATTTAA
AATTTATTTTTATAATGCTAAGCAGAAATCTAGTTGTTATTTTTTAGGGA
TCCTATATATATAATTCTTTAAAAAAATTAAAGGCAGCCTCCATCACATT
CTCCTTGCCATCTTTCTTTATAGGTTGCTGGCTTTGTTATCGTCCAAATA
CGCACGTGTATACATAGTTTTATCAATAACAGGACATTATGCCCTGTTTC
CACTCCTTTATCAACCCGCAGGTAATTCTTTTTAGGTGTAAGATCGTGCT
TTAGTAAAACCTTCAGTGTAACTCAAGGATGGATTTTACAATCTTTATTT
TCGGCCAAAATGTGTTATTCTTTTATAACTATTGAAAGTGGTTTAAAAAA
CATTTAAGTTTAGAAAGACTGCTTCTACTAAAATCTTTTTTTCTGAAATT
TCTGATGCTAAGATTTATAGAATAATTGATTCATTTATGTATTTCATCTT
TCAAACATATAGAAACACCGCTGAAGATTCTAATTTTATTGCTTCCAAAA
TTGATCACACTGGCGCTACTAAAAAAAATACACAAGTAAGTGTACATGGG
GCTTTATAAAGCTAGATTTCCCACAAATTTCAATGTCGATATTTATTTCA
TTCAATAATGCTAAAAAATATTGTCATTTAAGATATTTGGTTGGGGTTTA
GAATATTATTCCACATAGGTTTTATCACTTTAGAGGTCTTGGCTAAGACT
TCTAACTGGGTGTGAATTTCTGTAATTTTTAGATGGATGGAATGTAAACA
AAGTGTTACTGAAGATATAGTAGAAAATCTATCTTTCGTGTCTTTCATGA
TATTCCATTGTTTTCCTTATCTATATTTTTCGATAATTCAATCCAAATGA
TCAATCTGTGATGATACAGCCTTGCCCAGCTATTGCATATTTTATTTTTG
CAATTTATTTTTTCCCTTGGTTTTACAGTGAATTGAACCATTCTTGTTTG
TATTCTCTTGTGGTCAATGAACAGTGGATAAAGTCTATCGTCTCTTCCCA
ATATTCATGATTTTTTCACTGATTTAAACCTTCCCTTTTTCCGCATTTAC
GTAGTTGGCTTCCACAAGTTTTGATTCTCTACCCATAATTATCTCGTTGC
CATGGTTTCAGTCCTTTTTTTAGAAACGAGGATGCGTCACTTCTTTACTT
ATAGTTGACCTTTTCGCTTTTATATTATTGACCCTCAAAAAGAATTTGTC
TGAAAATCCTTTTGTCTGGAAGATGAGGAAAACCCAATCTTAATTCTCAA
TAATCCAAATTCAAGCTAAATATTTTGCAGAATTTACCCACTTTTTATCT
CTATAACCTTTTACGAACATATCCATCCATCTTTAGTTCACTCTGTGAGC
ATTTTATTTCATTGATAAAAGTTCTTCCCTTTCAGCGAGGTATAAAAAGA
GGATTTTTTATTCTTCAGAAATCTGCATAATTCGCAAAGAATAAGCGCTT
ATTTGCTTGTAAAATTCATTTTCCGTCTCATTACTAACCCACTCGTCTTT
AAAATCTTAAAGTCGGGAGTTTTTGGTATCTTGCAGGCTGATTCTCAACT
TCAATTGAACTAGATTCAGAGAAAGACTGCCTGTCTGACTATGTATCCCA
AAAGTTTTGGCCAGCCTAAACATGGTTGTTCCTTGGAATACCTGGGAATG
AGCTGCAGTTTTTATAAGATATTTCCACTAATTGCAGAAGCTACTATGTT
ACGACCTTCAATCTTTTATACAATTATTGTGTTCTGATATCTGGACAAAT
AGTTAGATGTTTGAGTATTTATCCCTTCTTTTCTTTGTTTTAGGGTAGAG
AACGGTTTCTTTGGACTTCCTTTTGTCACGTGGTATGAATCTTTATATTT
ATACGGACTCGCACCTCTATACCTTTACACAGAGTTCGGACACCAAATAT
TGGGTTTCCAAGAGATACTACCCTTTGTTCCTCTAATGATGACGTCATTT
TATTGTTCTATCGGAGTCATTTGGAGTTGGTTGTTGTTATATTCTGACTT
TTTACTTGAAGTGGAGAAAGAGGAACCGAAAAAGAAGCAAGATGCTTCTT
CTAATACGAAGCGTAAAACTAAAAAGAAAATTCAATAGTTCCGAATAAAA
CGCACTGTATTTACAATAAACTCGGAGATATTTGACTTTGTTCTTAGACG
TTTTCAAGGCTATTTATAATTTTTTTTCACTCGAACTTCGCCATATTCAC
AATTTGCTATCAATTATCAGAAGGTAGCAATCCATGAAAGACTGCTTTTA
ACCAGTTTTAACGGAGTTTATCCATCTTATTAATTTTATATCATTCTGAT
TAAGCTGTAGTTATGTAGGTCGCTTTTCATCGGCCATTATTTATGGAGAA
TTTTTTATAGAATTTTTAAATGATTCGGTTGCAAATTTTGTATTTTAGGG
TCAATTTTTATTGACATTGATTATAGAAAGATTTTTCAAATTCTTTAACA
ACAACCTTTTAAAACTCTTTTGATTTTT

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_034417	XLOC_034417	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_243	supercontig	scaffold_243:379606..388683 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
50.6699	44.8738	13.7031	8.27168	6.97882	4.64035	8.49807	8.02255	6.95761	6.37667	9.50836	0.719895	0.665251	0.387652	8.35888	10.6216	14.3535	12.4138	0.425373	4.80859	10.6485	11.4084	40.4092	34.7387	7.7016	9.49458	5.61482	0.666899	30.6254	32.3679

Blast

[Close]

BLAST of TCONS_00054633 vs. Swiss-Prot (Human)
Match: ALG8 (Probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase OS=Homo sapiens GN=ALG8 PE=1 SV=2)

HSP 1 Score: 425.246 bits (1092), Expect = 2.252e-140
Identity = 248/513 (48.34%), Postives = 341/513 (66.47%), Query Frame = 3

Query:   48 FLQFAIIMSCVKLLLLNSYKSTDFEVHRNWLAITYTLPVSEWYFEETSEWTLDYPPFFAWFEYALSQVAVYFDDQMLDLDNLGYDSVKTVLFQRLSVIAMDLVLLYSLH---KFYDQLFQGKD-DDNTKMFLLVSIFANSGLLLVDHIHFQYNGFLFSFLLLSITDMLQDKFLPSAFWFTVLLNFKHIFLYIAPCYFVYLLRNYCFRRPIQKSWFTIFGVDILQLSIFNVLKLAFVVIGVFMISFGPFIYLEQIPQVVSRLFPVKRGLCHAYWAANFWAVYATTDKVLTIAGPKLGLPISKQSDVASMTGGLVAQQNFSVLPNIPAIVTGIVTILFMLPALLRVWYRPYSVKTFLPCLTLCAYASFLFGYHVHEKXXXXXXXXXXXXXXXSSKYARVYIVLSITGHYALFPLLYQPAEXXXXXXXXXXXXXXXXXXXXXXHKVENGFFGLPFVTWYESXXXXXXXXXXXXTEFGHQILGFQEILPFVPLMMTSFYCSIGVIWSWLLLYSDFLL 1574
            F   A+ ++ +K LL+ +Y STDFEVHRNWLAIT++LP+S+WY+E TSEWTLDYPPFFAWFEY LS VA YFD +ML++ NL Y S +T+LFQR SVI MD++ +Y++    K  D    GK+  +  K  L V +  N GLL+VDHIHFQYNGFLF  +LLSI  + Q + +  AF F VLL+FKHI+LY+AP Y VYLLR+YCF             +     S   V+ L  VV  V  +S GPF+ L Q+PQV SRLFP KRGLCHAYWA NFWA+Y   DKVL++ G KL          ASMT GLV Q   +VLP++  + T I T++ +LP++  +W++P   + FL CLTLCA +SF+FG+HVHEKAILL ++P++LL++  +  A ++++L+ TGHY+LFPLL+   E P+KIL++LL  + +++ LK + + E      P   W E+ YL GL PL +  EF      ++   PF+PL++TS YC++G+ ++W  LY   L+
Sbjct:   14 FSALALGVTLLKCLLIPTYHSTDFEVHRNWLAITHSLPISQWYYEATSEWTLDYPPFFAWFEYILSHVAKYFDQEMLNVHNLNYSSSRTLLFQRFSVIFMDVLFVYAVRECCKCIDGKKVGKELTEKPKFILSVLLLWNFGLLIVDHIHFQYNGFLFGLMLLSIARLFQKRHMEGAFLFAVLLHFKHIYLYVAPAYGVYLLRSYCFTANKPDG-----SIRWKSFSFVRVISLGLVVFLVSALSLGPFLALNQLPQVFSRLFPFKRGLCHAYWAPNFWALYNALDKVLSVIGLKLKFLDPNNIPKASMTSGLVQQFQHTVLPSVTPLATLICTLIAILPSIFCLWFKPQGPRGFLRCLTLCALSSFMFGWHVHEKAILLAILPMSLLSVGKAGDASIFLILTTTGHYSLFPLLFTAPELPIKILLMLLFTIYSISSLKTLFRKEK-----PLFNWMETFYLLGLGPLEVCCEFVFPFTSWKVKYPFIPLLLTSVYCAVGITYAWFKLYVSVLI 516

The following BLAST results are available for this feature:

BLAST of TCONS_00054633 vs. Swiss-Prot (Human)

BLAST of TCONS_00054633 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ALG8	2.252e-140	48.34	Probable dolichyl pyrophosphate Glc1Man9GlcNAc2 al...	[more]

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TCONS_00054633 (transcript) - C. hemisphaerica