TCONS_00054638 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054638
Unique NameTCONS_00054638
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1735

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054638 ID=TCONS_00054638|Name=TCONS_00054638|organism=Clytia hemisphaerica|type=transcript|length=1735bp
actaATCACTACTAAATCAACTAACAATTAATAAAACTAAGGAGAAGCAG
AAaatgaaatttgcaaaaattatATAACTTAACTTGCAAGATTGATCAAT
AAAATCAAGATAATTTAATGCAGAAGAACTCACCATGGGCGGTCAGACGA
CGATCGTGGAACCCATCTTATTTGCTTACATGTTCAACAATTTCATTCTA
TCACCCGTCGAACAACAACTAGTCTTCAGAAAAACATGCTTTCAAAACTT
CAACAAATCATACTGTCAAATTCTATTCGAATCGAAAAACGAAACTTATA
AGGACGATCAGAATTTTTTACAAGAGAAAACTTCACAATGGGACATTTAC
TCTAATTTGGTTCAAATGTTACCAGCTATTATATCCACGCTTGTTTACAC
CAGTTGGTCAAATAGAATCGGTCGCAAACGGGTTATGATTCTACCCATGA
TTGGAGGGACAATACTAACAATAACACTTATCTTAAACTCATACTTCGAG
GAATGGCCTTTAGAGTTGTTACTGATTGGTTCTTTCTTAGATGGTTGCTT
TGGTCAATTTGTGGCAATCATAGCATCCATTTATTCATACGCTGCAGATG
TGACGTCCATTGAAGGACGTACTAAACGAACAGTTATTCTTGAATCTATG
ATGTTTCTTGGTGGTGTCGTTTCAAGTGCAATCAGTGGTATCTTATTACA
GAAATATGGTTTCATACCAACTTTCCTACTGGTATTAGCAATGTTTGCAT
TTCAAATGATTTATTGGTGTTTTTTACAAGAATCATATCCACCAAGGCCT
GACCAACCGAAGATTTCATTTTGTCAGATCTTGAAAGGTGAAGCATTGAC
AGGTGCCATTCGTGTTGTGTTTAAAAAGAGGAATGGTAACAAACGAAGAA
CCATCCTTCTGTTGTACGTTGTTCTATTGCTCTTCACTTCGGTGTACACT
GGATACGGTGATGTGAGTGTTCTATACATCCTACATCCACCAATCAATTT
CTCTTCTGCCAATATTGGTTACATGTATGCACAGTTCAATGGTCTCAAAT
TTATTGGTGCTTCATTCATCAACTATGTCTTTTTGCACAAATTGGGTATT
CCTGACATTCGAATATTGACCATTTTTCCGTTGGCTTTTATTGGTTTTTG
TTTAACTTTGGCGTTTACAACGACGGCTTGGCAAGTCTTTGCATCTGCAG
CATGGGGACTTGGGCTGGGTGTTGGCCCAGGTGCGATTCGTGGAAGGTTG
TCGAAAATCGTTGGAAGAAGTGAACAAGTGGATTGATCATCAACGGAGAC
GACGAAGAAGATTACGAAGAATTgaatgaagaaaatgaaaatgaagatga
tgaGAATTCAAAACATGACTCGCTCAACAAAACTGTATGAAAATATCCGC
TGACGAGATACTGCACGTCTTTTGAAACATATATCATTTTAATACTATTG
TTTGTCCCcgaaaaataattataaaaaattttatACCTAATTTTTATGAT
CAAgctatttcttttctaaaaaagtgtttaattACTTTGCCTTGTAGCTT
GTAACTAAATATCTATTTAATGTAACAAATAAGTTTCTTCTCATTGTAAA
TAATTTCATACACAGTAAAATTAATGCTTTTACAAGTTTCTATTTCCATG
AATTGTGTCCCGCTTTTCTGTTCGTATTGGCGTACCTTAATTCTTGTTTA
GTACTAGTAGTGGTTCTTCACTTTCACACGTGAGA
Run BLAST on NCBI

transcript from alignment at scaffold_243:425795..438126-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054638 ID=TCONS_00054638|Name=TCONS_00054638|organism=Clytia hemisphaerica|type=transcript|length=12332bp|location=Sequence derived from alignment at scaffold_243:425795..438126- (Clytia hemisphaerica)
ACTAATCACTACTAAATCAACTAACAATTAATAAAACTAAGGAGAAGCAG
AAAATGAAATTTGCAAAAATTATATAACTTAACTTGCAAGATTGATCAAT
AAAATCAAGGTACGTAATTTTAATATCATGTGATTATCCATCACGCCATC
ATAATTTTCAAGTTTATTTTAGGAGTAGAGACATAACTTAAGTCTGCTTC
AAAATTTTGCGTTTTTTATTTACATAGTTACCGCACACTAGTTCTACATC
TCACGATATTCATCACGTGATATTTTATACGGAAGCACCAGGTCCGGGTG
TTTAGTACTTATTTTGAATTTAAAAAATAAAACTAGTGGCAAACGCCCGG
AGCTATTTTCGGGTGCTTCCGTATAGAACGTTCCGTATTGAATGTCATGT
ATAGAGAAACTTGCAGAGTCTATCTTTGCAAATTTTTAACAAGCCTTGTA
ATACGAAGCTGATGAGGACGTAACGATGTTTAAAGCTGGGAAAAGGATCT
TTTAGATATTCGTAAAAATGTGTACGGTCAAATATTTGTAGTATTAGACT
GGAGTCGTTTATAATGCGTGTAATACAGTAGTATAGGCGTTATATGATAA
TACGACTATTGTTACGGGATTTAGTTTGTACAAACTAAAATTTGTTCTCT
CCATTACTTTTTGCTTTATTTCTACTATGTCTGAATTAGTCGTCTAGTTT
GATAGACTATGCTAATATTAATTATACAAAGTATTTGTAAATTTGATTTC
GTCAATTGAGAAATGCGATCCTAAACTTAAAAACCTAAACCTCTGATATA
ATAAGTTTATAGGAGGCTTATGAAAAAAAGGGTTGTGTCAAGTGCTGTGA
ACTTGTAATTCAAATGAAGTGATAAAAGTAAACTTAACGCGTGACTTTTA
AATGTTCAACGTATTTTGTTTGCTATATTTTTTATTGACTTTTTTTAGGT
TTTAGTTGTTTGTTTTTCCAAAATCAATATATGGAGCTACAAATATTCGC
ATTCTCTATAAAAATGATTATTCAATTTTGACATTCTCTGGTTGTTTCTA
ATTGATCAGTTTATACTCATGTCTTGCATGAACTTTGCACATTGATACAT
TGGAGGAACAATACCGTACACGTTTTGTAATTAGAACCCAGCTTATAAGA
AAATTTAGAACTGAAATTAAAAATAAGAACAACGTAAGAACATCGAGAAC
ATGACAAGCCAAATTTGCTCAAAATTATCTGAAACTTAAGTAATTCCAGT
AATTATTTTACTTTCAAACTTGAATTTGAGCAAATTTATTCGGCTTGAGG
GCCATTTTTTATATCTCAAAGGTATTTCTGTATATTCAAGTAAATTAATT
TCAAGAACGCCAATAAAAAGATTTTAGACTCAAAATTGCCTCTTCTTTCA
GATAATTTAATGCAGAAGAACTCACCATGGGCGGTCAGACGACGATCGTG
GAACCCATCTTATTTGCTTACATGTTCAACAATTTCATTCTATCACCCGT
CGAACAACAACTAGTCTTCAGAAAAACATGCTTTCAAAACTTCAACAAAT
CATACTGTCAAATTCTATTCGAATCGAAAAACGAAACTTATAAGGACGAT
CAGAATTTTTTACAAGAGAAAACTTCACAATGGGACATTTACTCTAATTT
GGTTCAAATGTTACCAGCTATTATATCCACGCTTGTTTACACCAGTTGGT
CAAATAGAATCGGTCGCAAACGGGTTATGATTCTACCCATGATTGGAGGG
ACAATACTAACAATAACACTTATCTTAAACTCATACTTCGAGGAATGGCC
TTTAGAGTTGTTACTGATTGGTTCTTTCTTAGATGGTTGCTTTGGTCAAT
TTGTGGCAATCATAGCATCCATTTATTCATACGCTGCAGATGTGACGTCC
ATTGAAGGACGTACTAAACGAACAGTTATTCTTGAATCTATGATGTTTCT
TGGTGGTGTCGTTTCAAGTGCAATCAGTGGTATCTTATTACAGAAATATG
GTTTCATACCAACTTTCCTACTGGTATTAGCAATGTTTGCATTTCAAATG
ATTTATTGGTGTTTTTTACAAGAATCATATCCACCAAGGCCTGACCAACC
GAAGATTTCATTTTGTCAGATCTTGAAAGGTGAAGCATTGACAGGTGCCA
TTCGTGTTGTGTTTAAAAAGAGGAATGGTAACAAACGAAGAACCATCCTT
CTGTTGTACGTTGTTCTATTGCTCTTCACTTCGGGTAAGATTCTTCATTG
TTTCTACCATAGTGATTTGAAAATGAAACTGATAACAGTAATGAGACTCT
CCAGTGGTTTTCTTGTGTGATAGAGTGATCCAAAAAGTTTTTATTGCATG
GTACAAAAATTTGTAGGTACAATGCGTGATTTTGGCTATTTTGGCTATTT
TTAAGCGATAATAAATCTTAACGATTTTCGTAATGTACGGACAAAAAATA
TTGCGTGATAATGAGGGTGCCTCTGGGGCCTCAGTAAACGTCGTTCCGAA
AGAATTTTCGTAAATTCTTTCCAACCAACTACCTATTCTAAAATTTTCAA
ATTTTTTATTTTTCTTGCCTAGTGTACACTGGATACGGTGATGTGAGTGT
TCTATACATCCTACATCCACCAATCAATTTCTCTTCTGCCAATATTGGTT
ACATGTATGCACAGTTCAATGGTCTCAAATTTATTGGTGCTTCATTCATC
AACTATGTCTTTTTGCACAAATTGGGTATTCCTGACATTCGAATATTGAC
CATTTTTCCGTTGGCTTTTATTGGTTTTTGTTTAACTTTGGCGTTTACAA
CGACGGCTTGGCAAGTCTTTGCATGTAAGTGACAGATTTATGAAACTTCT
TATTCCGTGTTCTTAAAACTTATCCTTAAGGCCGGGGCAAACCGATCCAA
CATTTCATCCAACATGCCTTTTTTCTGATGTTGGATGAAATGTTGGACCG
GTTTGGGTCAATTCAAATTTTTGGAAAAAAATGAAAATTCAAAAAAAAAA
AAAAAGTACCACCAAACCAATCCAACACGAAAAATTACACAATTCAATAA
GAGAGCTTCTTTGATCTCGCCGCAAATGTTGGATGAAATGTTTGATGGTG
ATCAAAACTTCATCCAACACCATCCAACACGATTTTTTTCTTCTTTTTTT
GAATTTTCATTTTTTTCCAAAAATTTGAATTGACGTCAACCGGTCCAACA
TTTCATCCAACATCAGAAAAAGGCATGTTGGATGAAGTTGGATCGGCTTG
CCCTGGCCTTGCACCTTATCAGTAGAAAATTGGTCGGCAAAAGGTTTTGT
CACCTTGTCAATAATGTCCACACCTTTTACCGACAATTTTTTTTTGCCAG
AAAAACGTCAATTTTTAATTGGAATTAAAGATTTTATTTTTACATAAGTG
TTCCCGTTTTATATCAGACACATGTTTCGTATCAGGACAGTGTCTGCCTA
TTGTTATAGTTATTTTGCTGATGTAAAATTTCCTCTTTCTGACCAACTTG
CTCCATATCCGTGTCAATTCAATATTAAAAAGCTTGTGAATTAAAATTGA
TGAGTTAGCAAGCATTATCACTCTTATTTAAAAACAAAACCTTTAAAGCC
GAAAAGCACCAGAGAATTCAGCAACTATTACCTTAGGGGAACTTATATTT
TGGCGGAAAAATCCTGAAAATTTTTTATTTTAGCGAGAACTTATTTTGGC
GATTGATGAATTTTTTTAATTTTGGCAGGAACTAATTTTGGCGAATGACA
GTGTAACTCTGTTCTATTTTGCCATATTTGAAGCTTTTTTGTAAACTCAA
GAAGTTATTTAGGCAAAACTAGACGGTTCCCGTCGTCGCAAACGCCGGTT
AACGGTTTTGCTTGCACATCAAAAGCCTTTAAAATATTATAATGTGGGTT
AATTACTGACATCGTTTTGGCTTAAAATGCCGAATACAATAATAAAAATT
ATACTTCTAAACTTTCTACATTAGTCAAAATTTTGTGTCTGTAAGCCTCT
ATGATATGTCTTTTTAAGATAACGGAAGTTTGTGTTCAATGAAATGCCAT
AGTGACCCTGTCAAAATTATCGAGGGTATCCGTCGTTGCAGACGCCCAAA
GGTGTCTGAGTTGGTGAGAGGGTTGTTTCTAGGAAAGAAAAAGGCTTAGT
TGTGAAGGAGAGGCTCGCGCTTTGCGATTGAGCACTGAAGGTTTTCCCGT
TTGTTGGCTTCACATGCGGACAGCTTAAGACCGACGCATATGCAATGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNAGGAGGATAGGTTTTCCAGCCGCGGCGTTCAAATTTT
AGAAACCTTAATATGTTACTGGGCTAGCGTTACAGACATTTTTCATAAAC
TCATTTAGTATATTAAGATAGCAAAAATTTTAATTTTGGTGGGAACTTAT
TTTGGTGAGTGAGCAAAATATTTAATTTTGGCGGAAACTAGTTTTGGCGA
ATTTTGTCTAAATTTGCCGAATTCGCCAAAATTAGTTCCCGCCAAAATAA
TTTCCCTTCAGGTAAATTACCTAGTTTCTGTAGTAATGTTCTGTCGTAAA
TAAAAACATTAACCCAAAATTTTGCGTTAAAGTATTCAATTTCAAACAAA
AAAATGTTTAAAGTCACCAAAAGTTTTCTAATTTTCTACCCATAAGGTAG
TGTCAATGTGACAATAATATGCTTCGAAAGTTTTCAAAGAAAGTCCTTAT
ATAAATTTTACAATTCTTAATTTAGCTGCAGCATGGGGACTTGGGCTGGG
TGTTGGCCCAGGTGCGATTCGTGGAAGGTTGTCGAAAATCGTTGGAAGAA
GTGAACAAGGTATGGTAAAAAAATGCTTTCGGTCTTTTTACATCCCCTTC
TCACAGACCCGGTAGGATTNTGAACAAGGTATGGTAAAAAAATGCTTTCG
GTCTTTTTACATCCCCTTCTCACAGACCCGATAGGATTATTTCAGCCAGT
AGTGTAGAAATAACGGACTGAAACTCGATTGAGATTGGCTTTCCCATGTA
TTTTATGGCTCTACATTGAATTCCATTTGTCAGAAAAATCTTTGGAATGT
TGAAAAATATGACAATATTTTGTGGTGAGGATTCGTTTATTTAATTATTT
TAATCGGGGATAAAAATTGGAATATAATTTTCCACTGGGGACGATTTTTT
GGTCAATTCTTCCAGTGAGAGGGGGTCTTTGAGAGGGAGGGTTTTTACCA
AAACCAGTATCCCACATCGGCACAGAAAGTTAATACGATTACTTATATCC
TTAAGGGCTGACCATAGTCTAAAAATAGATTTTAGTATTTGAACATAAAA
TTTATGTTTTAGGTTCTTTAACACTTTTATCAAAGAATTGCTTTTAGAAA
TTGCTTTTTAATCAAATCCCTTGAGAGTAATTAAGAATTTAACTGCAAAA
ATGACGCTATGAACTTTAAAAAGACGTTAATAATGTGTTGCACCTTCTTT
TATAAAAAGTGCTAAGTTTTAATGGGTAATTAACCTTTTTGTTTCCAAGT
TTTTTCAAACTGGCTGCGTTTAGACCAACTGGCATTTGTAATTTGGCATT
TACTCATGAGGGATTCGATTTTGATAGCTTTTCCATTGTATTTTCTGTCA
TGGCATTTAAGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGGCATCATTAGGCATTTGACAAACCG
AACAATTGCGCGGAACAATAGAATTCAAAAGAATACTGCAAGCAATTACA
AATGCCAGGCTGGTCTAAACGAAGCCACTGTCCTCAAAGAATAGCGCTCC
GCAATGCATACGTCATAATTATTACTTTTCACTTTTTTTGACATTTGTAC
GAGTTGCAATCCCACAATTCAACGCGGCTCAATTAAAGATACGTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTTCAGCGCGGTGCGCTATTGAACTGTTTTAAATTTTTCTAA
ATTGAGGCATCAAAAGTAGAATATATATTTTTTTTCGGTAAAAGATACAC
CACCTACCGCAAAAAGTTTTTCAAAATGTTTTTTCTTCGTTGAAAATAAG
CTCTTCGAAGTTGAAATGCTCTTCTTGGCAAAAGTCTTCAAATTCTTCTT
CATCAATTTTTTTTATTGCGTTTCTTAAATTTTCAGACTCGAGGATAATT
GGCCTAACAGAAAATGTATAACATGCCACCGTTTTGTGGGCTACATCAAG
TAGAGATTTATATTTTGTACGTGGCAATTATTGAAAATTCACTATGGTCA
GAGCCCTTAAAACATAATTTTTGATGATACAATGATATACAAAAGAAGAC
GCGCACGTCTCTGATGCGATGCTGGCAAAGCAAAATTAATTGCTCGCACG
GCTTGGCATAGAAATGGTTTTGATAAAAATGCATGTATTTTACAACTTTT
ACAACATGGGAAGCTTGTTTACTTTTCAGGTCATTTATTTGCATTTATTG
CATCAACGGAAATCGCCATAGCTTTTGTAGTAAGCATTGCGTTTAATGCA
ATTTACAAAGCAACAGTATCCATCTCAACGAAGATTATTTGATACATTTT
ATCAGCGCTGTCACTTGTCTCCTTCATTATTGTTATGTAAGTCTTCAATA
GTTTGGTAGAATTAACTCAATCGAATTAAAACGTTTTAGACCCTTTTTGG
GCCCCATTTTTTGATGATGTTATTTGTCAGTACACGAGTCTCAAAGATGT
GCCAGATACGCTTATGTCTTTAGGGAAAGCCAATGAGAAAGATTAACTAA
AAATCTTGCCCCGTCTGACTGAAAACAGGGATGTGCTTAACCTATACAAA
CCCCTGCAAACAAAGACTGTTTCAAAAATGAATTTCGACACTTGATATCT
AAAGATCATGAAAAGTAGATAAGGAAAATGGGGTCGTTTTTTTTGTAATT
TCGTCAATTAGACCCCTTAAATGGCTCGAAAATCCGTCACTTTCTTGGTG
GCGTCGTTAGCTAATGCTCAGTAAGATGTGCATTTTCAAACCAGACTCAA
AAGACAGGCCTTGAAATGAATTAACCGAAAACGGTATGGTTTTAAAAGTA
TTCGGTAGCTACATCACAAGATATCTAGGTTTTGAAATCAATGTTTTCTG
CTGAGTTAGCACATTTTACATTATTTTAGCTGAGTCAGCAAAATTTTAAA
ACATCAACACACTGAAAGGTTTTTTTGAAACTTCGTCACTTGCCTAAAAG
TTTCAGCACTTTACCCGACTATTTTTTCCCCTTCAAAGCCAATCTATACT
CATATGAAGCTGCTTGCTGATATTGCAGAAGCAATCTTAGAGTCTTTTTA
CTGCCAGATTATTTAGGTTTTAGCGCTTCTTTGATGCTAGTTAACATAAA
GTTTTTTGACATTTTTTTAGTTTTGTTCAAGAAAATTTCGCAGATAAGAC
TTTTCTAAATTTTCATGGAGACTTAATTCGCGGATGACACCCAAATCCGC
GAAAATTTATCCCATTAAGGTAATTTTAAAATNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCCCGACTATTTTTTCCCCTTCAAAGCCAATCTATACTCATATGAAGCT
GCTTGCTGATATTGCAGAAGCAATCTTAGAGTCTTTTTACTGCCAGATTA
TTTAGGTTTTAGCGCTTCTTTGATGCTAGTTAACATAAAGTTTTTTGACA
TTTTTTTAGTTTTGTTCAAGAAAATTTCGCAGATAAGACTTTTCTAAATT
TTCATGGAGACTTAATTCGCGGATGACACCCAAATCCGCGAAAATTTATC
CCATCAAGGTAATTTTAAAATGTACTTTAATGGGATAAACTTTCGCAGGG
ATTAAATTTCGCGGATTTGGGTGTCATCCACGAAATTAAGTCCCAATGGA
AATCTGGAAGGCCCTCATCTGCGAAATATTTCTAAACAAAACTCAAAATA
TGTCAAATAAATACTATTTGAATGGTTAATTGCATCAAAGAGGCGCAAAT
AATGTGTATTTCAACAACCNATAACTAAATAATATAAATACTATTTGAAT
GGTTAAATGCATCAAAGAGGCGCAAATAATGTGTATTTCAACAACCAATA
TGCATGATTTGAAAGATAAAGTCACAAATTCGTGAAAATATTGCCCCTAA
TAGTGCCACCCGCGAAATTAAGTCCCCGCGAATTTTTTTAATTTCGCGGA
TAGGCCCAACCGCGAAATTTAATCCCTGCGAAAGTTTATCCCATTTAAGT
ATCTGATTGGTTTCTTTTTAAACAGTGGATTGATCATCAACGGAGACGAC
GAAGAAGATTACGAAGAATTGAATGAAGAAAATGAAAATGAAGATGATGA
GAATTCAAAACATGACTCGCTCAACAAAACTGTATGAAAATATCCGCTGA
CGAGATACTGCACGTCTTTTGAAACATATATCATTTTAATACTATTGTTT
GTCCCCGAAAAATAATTATAAAAAATTTTATACCTAATTTTTATGATCAA
GCTATTTCTTTTCTAAAAAAGTGTTTAATTACTTTGCCTTGTAGCTTGTA
ACTAAATATCTATTTAATGTAACAAATAAGTTTCTTCTCATTGTAAATAA
TTTCATACACAGTAAAATTAATGCTTTTACAAGTTTCTATTTCCATGAAT
TGTGTCCCGCTTTTCTGTTCGTATTGGCGTACCTTAATTCTTGTTTAGTA
CTAGTAGTGGTTCTTCACTTTCACACGTGAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034419XLOC_034419Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054638-exon-scaffold_243-1575043694:438018..438126TCONS_00054638-exon-scaffold_243-1575043694:438018..438126Clytia hemisphaericaexon
TCONS_00054638-exon-scaffold_243-1575043694:435893..436725TCONS_00054638-exon-scaffold_243-1575043694:435893..436725Clytia hemisphaericaexon
TCONS_00054638-exon-scaffold_243-1575043694:435303..435554TCONS_00054638-exon-scaffold_243-1575043694:435303..435554Clytia hemisphaericaexon
TCONS_00054638-exon-scaffold_243-1575043694:432568..432651TCONS_00054638-exon-scaffold_243-1575043694:432568..432651Clytia hemisphaericaexon
TCONS_00054638-exon-scaffold_243-1575043694:425795..426251TCONS_00054638-exon-scaffold_243-1575043694:425795..426251Clytia hemisphaericaexon
TCONS_00054638-exon-scaffold_243-1510915933:438018..438126TCONS_00054638-exon-scaffold_243-1510915933:438018..438126Clytia hemisphaericaexon
TCONS_00054638-exon-scaffold_243-1510915933:435893..436725TCONS_00054638-exon-scaffold_243-1510915933:435893..436725Clytia hemisphaericaexon
TCONS_00054638-exon-scaffold_243-1510915933:435303..435554TCONS_00054638-exon-scaffold_243-1510915933:435303..435554Clytia hemisphaericaexon
TCONS_00054638-exon-scaffold_243-1510915933:432568..432651TCONS_00054638-exon-scaffold_243-1510915933:432568..432651Clytia hemisphaericaexon
TCONS_00054638-exon-scaffold_243-1510915933:425795..426251TCONS_00054638-exon-scaffold_243-1510915933:425795..426251Clytia hemisphaericaexon
TCONS_00054638-exon-scaffold_243-1491911889:438018..438126TCONS_00054638-exon-scaffold_243-1491911889:438018..438126Clytia hemisphaericaexon
TCONS_00054638-exon-scaffold_243-1491911889:435893..436725TCONS_00054638-exon-scaffold_243-1491911889:435893..436725Clytia hemisphaericaexon
TCONS_00054638-exon-scaffold_243-1491911889:435303..435554TCONS_00054638-exon-scaffold_243-1491911889:435303..435554Clytia hemisphaericaexon
TCONS_00054638-exon-scaffold_243-1491911889:432568..432651TCONS_00054638-exon-scaffold_243-1491911889:432568..432651Clytia hemisphaericaexon
TCONS_00054638-exon-scaffold_243-1491911889:425795..426251TCONS_00054638-exon-scaffold_243-1491911889:425795..426251Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_243supercontigscaffold_243:425795..438126 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	1.19139	0.966228	0.547878	1.05481	0	0	1.21403	0.838285	0.657825	0.706531	0.332916	0.469584	0.890094	0.905018	0.887973	0.805155	0	5.81429e-06	0	0.46273	0.531511	0.575425	0	0	0.000694265	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054638 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top