TCONS_00054641 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054641
Unique NameTCONS_00054641
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2439

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054641 ID=TCONS_00054641|Name=TCONS_00054641|organism=Clytia hemisphaerica|type=transcript|length=2439bp
CTAAATTGTTGAAGGGTATGATATTATTAATCATTCTGCTGCATTCAAAC
taggtaaaaaatttttttctcacaaatcTGAAGTAGAATTATATTCAAAG
TTGAAGGAAAAAGTGATAAAATGAGAAAAACTACAATCATAGAACCAATT
TTGTTTGGATTTATGTTCTGTCGTTATATGTTATTGGATACTGAAGATCA
GCTCATTTACATGAAAACTTGTTTGAGAGCCTTCAACACATCGTTTTGTG
ATGCAATTTACCAGAATGGTACTGCCTTTAAGGCTGAACAGAGTGAACTC
CAGAATGAGTCAGCCAAATGGAAAGTGTATTTGAGTATTGTCCGGACTAT
ACCGCCTGTTATAATGACAATCATCTACTCATCTTGGTCAGATTATGTTG
GTCGGAAAAATGTTATTGTACTGCCTGTAATCGGATCCTCTATATCAGCA
ATGAGTTTTATATTAAATTCACAATACATTCAATCACCTGTTTACTATAT
ATTGGTTGGTGAATTATTTGCTGCTCCTTTTGGAAACTTTGTTGCAATGA
TTTCAGCTACTTTTTGTTATGCAGCTGATATTACACCGATATCTTTCCGT
ACGCAAAGGACTGTTATTTTGGAATCAATGATATACATTGCAGGTGCAAT
TGGACATTTTAGTGGTGGACAGATATTGTATAACTTCGGTTTTCAATATG
TTTATGGATTAACTTTATTCATTGATATCCTTCAAATCATTTACTGGATG
TTTATTGAAGAATCTTATGAATCAACCGTGCagcaaaagaagaaaagctT
ACTGGAAATGTTTACTTTAGAAACTTTCACTAAAGTcttcaaatttttga
gcaaaagtCGAGATGGTAATAGAAGAAGCATAATTTGGACCTTGTTTGTT
TGCTTCTCGTTCAGTTCTCTCTATTTCATGACTTTGAACAGTGCAACAAT
ACTTTATTTGTTGCACACACCATTTCAATTCCTTCCAACACAAATTGGAT
ACTTTCTTGGTGGAACTCTGCTGTTGAAATTTCTTGGCTCGCTGTTCATC
AATCTCGTGTTTGTTCATTGTTTGAAGATGAGAGATTTTTATGTCATGCT
GATTTCATTTANTGTGTTTGTTCATTGTTTGAAGATGAGAGATTTTTATG
TCATGCTGATTTCATTTACAACTTACACAGGATTGTTCATATCTATGGCA
GCTGCAAAGAATGACTGGCAGATATACTCAGctgGAGCATGGTCTTTTGG
AGTCGGAGTTGCAATAGCTGTTATCCGTGGAAAACTATCCAAAATTGCTG
CATTTGATGAGCAAGGGAGATTATTTTCACTGATCTCATCTGTTGAAGTT
TTGGTATCATTGTTCTCTGGGGTTACCATCACAAGTATTTATAAAACTAC
GGTGGACATTGAGCCTGCATTTGTCTTTTATCTCGTTGgtgcttcttcaa
ttttgccATTTTGTTTGACTTTATATTTGATCAAACTTGAAAATGAGGAT
AGGAAGCGAGAAGATTGTTGCCCTGCTGCTTTTGAAGGAACACCTTTGTT
GAAAAGTCAAACCTTCAACAAAGAAAGCAATGATGACTATTCATCGACTG
ACAATCTCTGATTTCTCTTGGTATATTACAATTACAACATACAAGGTATA
GACTAAGGCATTTTACAGGTTTAGATAGACACAGCAGCATTATATTGCTG
GAAAGTCTGTCTCATCAGACAGAGATTGAACACACGATGTAACTAATGAC
ATGGTATGACCCCacttgacatttttttaaatcctaTGTAAATATTGTTg
ttgttaaacatttttatatagttttctatttttagcctttttttatttaa
tcaaATTGTTTGATTAGCTTTGATTGCTAATCGGTCCATATAAAATCATT
TGAATTGCAATCAAATTTACGGTTCTTCATAGATTGGATTTGTGTTTCTG
CTCGTTTGATGTGACTAAATCGATTGACTTTGATTCAGCCTAGGTTTGCC
ACAAAAATGTTTCTCTCTTTcagtgtattttttaatttcgaaTCTCAAAA
GAAGCGTTGGAAATAACCAGGGAAAACTAAACTTTTGATGGTTGATCCTA
CAATTTGATCTACTATAGTATCGATTTTTACCGGTATTTTATAAAACACT
GCAATCTTGAAATTAAAACATCTTAGTAGCAATCAAAGTTACTTTTTATC
CATTTTAAGCATGATGACTTAGATCCAATCGACGAAATGGACTATCAAAA
TTCTTTTTCCCTTGTGGCGCACCTAGTTTGGTGCACAGTTACTTTTTAGG
ACTCACTCAGAAAAGAATaatctttatttcaaaatttttttaatcgaagt
TTACGGAATGCCTTGATTACATCAGTGTCATCTAATACCAATGTAATACC
GATTCACTTTGCTCAAAtgtcaatcaaacaaaaactGGG
Run BLAST on NCBI

protein sequence of TCONS_00054641-protein

>TCONS_00054641-protein ID=TCONS_00054641-protein|Name=TCONS_00054641-protein|organism=Clytia hemisphaerica|type=polypeptide|length=496bp
MRKTTIIEPILFGFMFCRYMLLDTEDQLIYMKTCLRAFNTSFCDAIYQNG
TAFKAEQSELQNESAKWKVYLSIVRTIPPVIMTIIYSSWSDYVGRKNVIV
LPVIGSSISAMSFILNSQYIQSPVYYILVGELFAAPFGNFVAMISATFCY
AADITPISFRTQRTVILESMIYIAGAIGHFSGGQILYNFGFQYVYGLTLF
IDILQIIYWMFIEESYESTVQQKKKSLLEMFTLETFTKVFKFLSKSRDGN
RRSIIWTLFVCFSFSSLYFMTLNSATILYLLHTPFQFLPTQIGYFLGGTL
LLKFLGSLFINLVFVHCLKMRDFYVMLISFXVFVHCLKMRDFYVMLISFT
TYTGLFISMAAAKNDWQIYSAGAWSFGVGVAIAVIRGKLSKIAAFDEQGR
LFSLISSVEVLVSLFSGVTITSIYKTTVDIEPAFVFYLVGASSILPFCLT
LYLIKLENEDRKREDCCPAAFEGTPLLKSQTFNKESNDDYSSTDNL
Run BLAST on NCBI

transcript from alignment at scaffold_243:448641..453218-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054641 ID=TCONS_00054641|Name=TCONS_00054641|organism=Clytia hemisphaerica|type=transcript|length=4578bp|location=Sequence derived from alignment at scaffold_243:448641..453218- (Clytia hemisphaerica)
CTAAATTGTTGAAGGGTATGATATTATTAATCATTCTGCTGCATTCAAAC TAGGTAAAAAATTTTTTTCTCACAAATCTGAAGTAGAATTATATTCAAAG TTGAAGGAAAAAGTGATAAAATGAGAAAAACTACAATCATAGAACCAATT TTGTTTGGATTTATGTTCTGTCGTTATATGTTATTGGATACTGAAGATCA GCTCATTTACATGAAAACTTGTTTGAGAGCCTTCAACACATCGTTTTGTG ATGCAATTTACCAGAATGGTACTGCCTTTAAGGCTGAACAGAGTGAACTC CAGAATGAGTCAGCCAAATGGAAAGTGTATTTGAGTATTGTCCGGACTAT ACCGCCTGTTATAATGACAATCATCTACTCATCTTGGTCAGATTATGTTG GTCGGAAAAATGTTATTGTACTGCCTGTAATCGGATCCTCTATATCAGCA ATGAGTTTTATATTAAATTCACAATACATTCAATCACCTGTTTACTATAT ATTGGTTGGTGAATTATTTGCTGCTCCTTTTGGAAACTTTGTTGCAATGA TTTCAGCTACTTTTTGTTATGCAGCTGATATTACACCGATATCTTTCCGT ACGCAAAGGACTGTTATTTTGGAATCAATGATATACATTGCAGGTGCAAT TGGACATTTTAGTGGTGGACAGATATTGTATAACTTCGGTTTTCAATATG TTTATGGATTAACTTTATTCATTGATATCCTTCAAATCATTTACTGGATG TTTATTGAAGAATCTTATGAATCAACCGTGCAGCAAAAGAAGAAAAGCTT ACTGGAAATGTTTACTTTAGAAACTTTCACTAAAGTCTTCAAATTTTTGA GCAAAAGTCGAGATGGTAATAGAAGAAGCATAATTTGGACCTTGTTTGTT TGCTTCTCGTTCAGTTCTCTCTGTAAGTATAGATTCATGTTGATTTTCAT TGTTAATCTGACCCCTCTCATAGATAATTGTGATGTCCAATTTGCTGACG GATTTTTACTTCTATAAGGATTGTCTTTGTTGGCTGAATGGGGGAGGGGG GTAAATTAACTGTAATTTTAATTGAATTTGAATTGCATCTTATTGAAAAT ATGGAAAATTAGAATTCAATTGGGGGCTGTTCATTTTAAATTTGGTAGAG CCTTGATCCGATTAGAACTAGCCCTTCAAAATGGCTTAATAACTGTTTGT AATATTTTATATTTTTTCGTCCAGATTTCATGACTTTGAACAGTGCAACA ATACTTTATTTGTTGCACACACCATTTCAATTCCTTCCAACACAAATTGG ATACTTTCTTGGTGGAACTCTGCTGTTGAAATTTCTTGGCTCGCTGTTCA TCAATCTCGTGTTTGTTCATTGTTTGAAGATGAGAGATTTTTATGTCATG CTGATTTCATTTANTGTGTTTGTTCATTGTTTGAAGATGAGAGATTTTTA TGTCATGCTGATTTCATTTACAACTTACACAGGATTGTTCATATCTATGG CAGCTGCAAAGAATGACTGGCAGATATACTCAGGTGTGTATAATTGAATT GTAAGACTGGTTGATATTTTAATCATTATGAATTCGAAGTTTTAAATCTC CGAGATGCAAAAATGGTTTGTAATGGTTATAAGGAAATTTTGACAAGAAA CTTCAAAGAAACTGAATGTCATTTTGCAACTTCAGAAAATTGCTTAGTAA TTGCATGCGTGCATGTGTCTAACACGTGCCTTATATGTTATCATAAAATG ACCCGTAGAAACTCATTAATTTTAAGTGGACATTTTGATTATGATCCCTA CAAATAACTCTACAATGGTTTTTTTTATTTTAAGCTGGAGCATGGTCTTT TGGAGTCGGAGTTGCAATAGCTGTTATCCGTGGAAAACTATCCAAAATTG CTGCATTTGATGAGCAAGGTAAAACAAATTATATCAAACTTTGCATTGCA AAGACTAGTCAGTAAAGCTATAAAACCTCTTGATATGATTGAAAACATAA GGAAAAGGCAATGGAAAAAGAGGGATTGTATTTAGAATTATACTTGACGG CTCCCGTCGTCGCAAACGTCTATTTAGCTTGCGCATCAATCAAAAGCCCT TAAGATTGTATTGTCGATGCTCTCTAAATCTATCTTATTAAGGCAATTTG CATTAGTTTGCATCAACGATGGAAGTACATCGAGCAGTGGGAAGATTTCT CGTTATATCTCCGAAGTTCCAATGTTTTTTTCAGGGAGATTATTTTCACT GATCTCATCTGTTGAAGTTTTGGTATCATTGTTCTCTGGGGTTACCATCA CAAGTATTTATAAAACTACGGTGGACATTGAGCCTGCATTTGTCTTTTAT CTCGTTGGTGCTTCTTCAATTTTGCCATTTTGTTTGACTTTGTAAGTACT TTAAACCTTGAAAACTTCTTCGTTTGCTCATTGCAATTGCATTGTTTTTA CTGTTATAAAGTTTTTGTTACCCGTTTTTTATAGGAACATCCAAAACTTT TGAAGCCTTCGTAACTTTTTTAGTTTCAACCCTAAGAATGTTTTTGAAAT GCTTTTATTTTCACCATTTTGAGAGTATTTTCGTGCATTTTTCTAATTAA TTGGATGTTTTAGAGTAGAAAAAGCCTTGAAATGTTGTTAAATATTTCTT AATATCGAGGCCTTATGGTTATGCTCTTTTATACCGGGTGTGCCACAAAA AGGTTTCGCTCTTTGAAACTAATTTTCTAGAAATCTAAAAATTTTAAAGG AACCATTCCTATTTCATTGGAAGGAAGAAAAATAAACTTAAATTTTGATG GGTCATTTATTAAATTCGATTCATTAGTTCAAAAGTGATGCTCTTAATTG AATAAAAAAGTTATTTTCGGAAAGTGCTCAAGAACGTTAAAAAATCTATC AAATTAAACAGAAGCATAATTACACGATGAAAAAAATGAAAATTGGCTGT CTAAATGAGCTTTTGTTATATAAAGGAAGGTTGAATTTCAATGAAAGGAA GAAAATTCGTCGAAAGAGGCCAAAAAATCTGGTAAAATTCATAAAAATAC ATCAAATATGGGTTTCGAGGTAGATCCAGCCTTACATAGACTATCCAGTC TAGAACCAAAAATCTGAGGAAAATTTCGGTAAAAAGTAAATTAAATGGAT TTTGATGAAGATTTTAAACCCTTGCAGCTCTTCAGTTTGAAAATTTATGT GTTTGATTGTTGAAACATGCTCTTAATCATGTAAAGGCTATTGCGATGGC CAAATTTAAAATAAAAATTTGATAGGTCGATTTTTAACGTTTTCAAGCAC TTTCTGGAAGTAACTTTTTTATTTAATTGAGCATAACTTTTGATCTAAAG AATCGAATTTAATGAACGACCCATCAAAATTTAAGTCTCTCTTTCTTCTT TCCAATGAAATAGGAATGGCTCTTTGAAAATTTTTAGATTTCGAGAAAAT TAGTTTTAAAGAGGGAAACTTTTCTATGGTACACCCGGTAGTTTGTTCTT ATAAAATAGCAGTTGTAGATATTTTTGAAACATAACCCTTTCAATCACAA TGACATATTTTTCAGAAAAGTTATATCTAAATAATGGTTTCAATTTCTTT TCAAACTTTAGATATTTGATCAAACTTGAAAATGAGGATAGGAAGCGAGA AGATTGTTGCCCTGCTGCTTTTGAAGGAACACCTTTGTTGAAAAGTCAAA CCTTCAACAAAGAAAGCAATGATGACTATTCATCGACTGACAATCTCTGA TTTCTCTTGGTATATTACAATTACAACATACAAGGTATAGACTAAGGCAT TTTACAGGTTTAGATAGACACAGCAGCATTATATTGCTGGAAAGTCTGTC TCATCAGACAGAGATTGAACACACGATGTAACTAATGACATGGTATGACC CCACTTGACATTTTTTTAAATCCTATGTAAATATTGTTGTTGTTAAACAT TTTTATATAGTTTTCTATTTTTAGCCTTTTTTTATTTAATCAAATTGTTT GATTAGCTTTGATTGCTAATCGGTCCATATAAAATCATTTGAATTGCAAT CAAATTTACGGTTCTTCATAGATTGGATTTGTGTTTCTGCTCGTTTGATG TGACTAAATCGATTGACTTTGATTCAGCCTAGGTTTGCCACAAAAATGTT TCTCTCTTTCAGTGTATTTTTTAATTTCGAATCTCAAAAGAAGCGTTGGA AATAACCAGGGAAAACTAAACTTTTGATGGTTGATCCTACAATTTGATCT ACTATAGTATCGATTTTTACCGGTATTTTATAAAACACTGCAATCTTGAA ATTAAAACATCTTAGTAGCAATCAAAGTTACTTTTTATCCATTTTAAGCA TGATGACTTAGATCCAATCGACGAAATGGACTATCAAAATTCTTTTTCCC TTGTGGCGCACCTAGTTTGGTGCACAGTTACTTTTTAGGACTCACTCAGA AAAGAATAATCTTTATTTCAAAATTTTTTTAATCGAAGTTTACGGAATGC CTTGATTACATCAGTGTCATCTAATACCAATGTAATACCGATTCACTTTG CTCAAATGTCAATCAAACAAAAACTGGG

Coding sequence (CDS) from alignment at scaffold_243:448641..453218-

>TCONS_00054641 ID=TCONS_00054641|Name=TCONS_00054641|organism=Clytia hemisphaerica|type=CDS|length=7455bp|location=Sequence derived from alignment at scaffold_243:448641..453218- (Clytia hemisphaerica)
ATATTTGATCAAACTTGAAAATGAGGATAGGAAGCGAGAAGATTGTTGCC
CTGCTGCTTTTGAAGGAACACCTTTGTTGAAAAGTCAAACCTTCAACAAA
GAAAGCAATGATGACTATTCATCGACTGACAATCTCTGAGGAGATTATTT
TCACTGATCTCATCTGTTGAAGTTTTGGTATCATTGTTCTCTGGGGTTAC
CATCACAAGTATTTATAAAACTACGGTGGACATTGAGCCTGCATTTGTCT
TTTATCTCGTTGGTGCTTCTTCAATTTTGCCATTTTGTTTGACTTTCTGG
AGCATGGTCTTTTGGAGTCGGAGTTGCAATAGCTGTTATCCGTGGAAAAC
TATCCAAAATTGCTGCATTTGATGAGCAAGATTTCATGACTTTGAACAGT
GCAACAATACTTTATTTGTTGCACACACCATTTCAATTCCTTCCAACACA
AATTGGATACTTTCTTGGTGGAACTCTGCTGTTGAAATTTCTTGGCTCGC
TGTTCATCAATCTCGTGTTTGTTCATTGTTTGAAGATGAGAGATTTTTAT
GTCATGCTGATTTCATTTANTGTGTTTGTTCATTGTTTGAAGATGAGAGA
TTTTTATGTCATGCTGATTTCATTTACAACTTACACAGGATTGTTCATAT
CTATGGCAGCTGCAAAGAATGACTGGCAGATATACTCAGATGAGAAAAAC
TACAATCATAGAACCAATTTTGTTTGGATTTATGTTCTGTCGTTATATGT
TATTGGATACTGAAGATCAGCTCATTTACATGAAAACTTGTTTGAGAGCC
TTCAACACATCGTTTTGTGATGCAATTTACCAGAATGGTACTGCCTTTAA
GGCTGAACAGAGTGAACTCCAGAATGAGTCAGCCAAATGGAAAGTGTATT
TGAGTATTGTCCGGACTATACCGCCTGTTATAATGACAATCATCTACTCA
TCTTGGTCAGATTATGTTGGTCGGAAAAATGTTATTGTACTGCCTGTAAT
CGGATCCTCTATATCAGCAATGAGTTTTATATTAAATTCACAATACATTC
AATCACCTGTTTACTATATATTGGTTGGTGAATTATTTGCTGCTCCTTTT
GGAAACTTTGTTGCAATGATTTCAGCTACTTTTTGTTATGCAGCTGATAT
TACACCGATATCTTTCCGTACGCAAAGGACTGTTATTTTGGAATCAATGA
TATACATTGCAGGTGCAATTGGACATTTTAGTGGTGGACAGATATTGTAT
AACTTCGGTTTTCAATATGTTTATGGATTAACTTTATTCATTGATATCCT
TCAAATCATTTACTGGATGTTTATTGAAGAATCTTATGAATCAACCGTGC
AGCAAAAGAAGAAAAGCTTACTGGAAATGTTTACTTTAGAAACTTTCACT
AAAGTCTTCAAATTTTTGAGCAAAAGTCGAGATGGTAATAGAAGAAGCAT
AATTTGGACCTTGTTTGTTTGCTTCTCGTTCAGTTCTCTCTATATTTGAT
CAAACTTGAAAATGAGGATAGGAAGCGAGAAGATTGTTGCCCTGCTGCTT
TTGAAGGAACACCTTTGTTGAAAAGTCAAACCTTCAACAAAGAAAGCAAT
GATGACTATTCATCGACTGACAATCTCTGAGGAGATTATTTTCACTGATC
TCATCTGTTGAAGTTTTGGTATCATTGTTCTCTGGGGTTACCATCACAAG
TATTTATAAAACTACGGTGGACATTGAGCCTGCATTTGTCTTTTATCTCG
TTGGTGCTTCTTCAATTTTGCCATTTTGTTTGACTTTCTGGAGCATGGTC
TTTTGGAGTCGGAGTTGCAATAGCTGTTATCCGTGGAAAACTATCCAAAA
TTGCTGCATTTGATGAGCAAGATTTCATGACTTTGAACAGTGCAACAATA
CTTTATTTGTTGCACACACCATTTCAATTCCTTCCAACACAAATTGGATA
CTTTCTTGGTGGAACTCTGCTGTTGAAATTTCTTGGCTCGCTGTTCATCA
ATCTCGTGTTTGTTCATTGTTTGAAGATGAGAGATTTTTATGTCATGCTG
ATTTCATTTANTGTGTTTGTTCATTGTTTGAAGATGAGAGATTTTTATGT
CATGCTGATTTCATTTACAACTTACACAGGATTGTTCATATCTATGGCAG
CTGCAAAGAATGACTGGCAGATATACTCAGATGAGAAAAACTACAATCAT
AGAACCAATTTTGTTTGGATTTATGTTCTGTCGTTATATGTTATTGGATA
CTGAAGATCAGCTCATTTACATGAAAACTTGTTTGAGAGCCTTCAACACA
TCGTTTTGTGATGCAATTTACCAGAATGGTACTGCCTTTAAGGCTGAACA
GAGTGAACTCCAGAATGAGTCAGCCAAATGGAAAGTGTATTTGAGTATTG
TCCGGACTATACCGCCTGTTATAATGACAATCATCTACTCATCTTGGTCA
GATTATGTTGGTCGGAAAAATGTTATTGTACTGCCTGTAATCGGATCCTC
TATATCAGCAATGAGTTTTATATTAAATTCACAATACATTCAATCACCTG
TTTACTATATATTGGTTGGTGAATTATTTGCTGCTCCTTTTGGAAACTTT
GTTGCAATGATTTCAGCTACTTTTTGTTATGCAGCTGATATTACACCGAT
ATCTTTCCGTACGCAAAGGACTGTTATTTTGGAATCAATGATATACATTG
CAGGTGCAATTGGACATTTTAGTGGTGGACAGATATTGTATAACTTCGGT
TTTCAATATGTTTATGGATTAACTTTATTCATTGATATCCTTCAAATCAT
TTACTGGATGTTTATTGAAGAATCTTATGAATCAACCGTGCAGCAAAAGA
AGAAAAGCTTACTGGAAATGTTTACTTTAGAAACTTTCACTAAAGTCTTC
AAATTTTTGAGCAAAAGTCGAGATGGTAATAGAAGAAGCATAATTTGGAC
CTTGTTTGTTTGCTTCTCGTTCAGTTCTCTCTATATTTGATCAAACTTGA
AAATGAGGATAGGAAGCGAGAAGATTGTTGCCCTGCTGCTTTTGAAGGAA
CACCTTTGTTGAAAAGTCAAACCTTCAACAAAGAAAGCAATGATGACTAT
TCATCGACTGACAATCTCTGAGGAGATTATTTTCACTGATCTCATCTGTT
GAAGTTTTGGTATCATTGTTCTCTGGGGTTACCATCACAAGTATTTATAA
AACTACGGTGGACATTGAGCCTGCATTTGTCTTTTATCTCGTTGGTGCTT
CTTCAATTTTGCCATTTTGTTTGACTTTCTGGAGCATGGTCTTTTGGAGT
CGGAGTTGCAATAGCTGTTATCCGTGGAAAACTATCCAAAATTGCTGCAT
TTGATGAGCAAGATTTCATGACTTTGAACAGTGCAACAATACTTTATTTG
TTGCACACACCATTTCAATTCCTTCCAACACAAATTGGATACTTTCTTGG
TGGAACTCTGCTGTTGAAATTTCTTGGCTCGCTGTTCATCAATCTCGTGT
TTGTTCATTGTTTGAAGATGAGAGATTTTTATGTCATGCTGATTTCATTT
ANTGTGTTTGTTCATTGTTTGAAGATGAGAGATTTTTATGTCATGCTGAT
TTCATTTACAACTTACACAGGATTGTTCATATCTATGGCAGCTGCAAAGA
ATGACTGGCAGATATACTCAGATGAGAAAAACTACAATCATAGAACCAAT
TTTGTTTGGATTTATGTTCTGTCGTTATATGTTATTGGATACTGAAGATC
AGCTCATTTACATGAAAACTTGTTTGAGAGCCTTCAACACATCGTTTTGT
GATGCAATTTACCAGAATGGTACTGCCTTTAAGGCTGAACAGAGTGAACT
CCAGAATGAGTCAGCCAAATGGAAAGTGTATTTGAGTATTGTCCGGACTA
TACCGCCTGTTATAATGACAATCATCTACTCATCTTGGTCAGATTATGTT
GGTCGGAAAAATGTTATTGTACTGCCTGTAATCGGATCCTCTATATCAGC
AATGAGTTTTATATTAAATTCACAATACATTCAATCACCTGTTTACTATA
TATTGGTTGGTGAATTATTTGCTGCTCCTTTTGGAAACTTTGTTGCAATG
ATTTCAGCTACTTTTTGTTATGCAGCTGATATTACACCGATATCTTTCCG
TACGCAAAGGACTGTTATTTTGGAATCAATGATATACATTGCAGGTGCAA
TTGGACATTTTAGTGGTGGACAGATATTGTATAACTTCGGTTTTCAATAT
GTTTATGGATTAACTTTATTCATTGATATCCTTCAAATCATTTACTGGAT
GTTTATTGAAGAATCTTATGAATCAACCGTGCAGCAAAAGAAGAAAAGCT
TACTGGAAATGTTTACTTTAGAAACTTTCACTAAAGTCTTCAAATTTTTG
AGCAAAAGTCGAGATGGTAATAGAAGAAGCATAATTTGGACCTTGTTTGT
TTGCTTCTCGTTCAGTTCTCTCTATATTTGATCAAACTTGAAAATGAGGA
TAGGAAGCGAGAAGATTGTTGCCCTGCTGCTTTTGAAGGAACACCTTTGT
TGAAAAGTCAAACCTTCAACAAAGAAAGCAATGATGACTATTCATCGACT
GACAATCTCTGAGGAGATTATTTTCACTGATCTCATCTGTTGAAGTTTTG
GTATCATTGTTCTCTGGGGTTACCATCACAAGTATTTATAAAACTACGGT
GGACATTGAGCCTGCATTTGTCTTTTATCTCGTTGGTGCTTCTTCAATTT
TGCCATTTTGTTTGACTTTCTGGAGCATGGTCTTTTGGAGTCGGAGTTGC
AATAGCTGTTATCCGTGGAAAACTATCCAAAATTGCTGCATTTGATGAGC
AAGATTTCATGACTTTGAACAGTGCAACAATACTTTATTTGTTGCACACA
CCATTTCAATTCCTTCCAACACAAATTGGATACTTTCTTGGTGGAACTCT
GCTGTTGAAATTTCTTGGCTCGCTGTTCATCAATCTCGTGTTTGTTCATT
GTTTGAAGATGAGAGATTTTTATGTCATGCTGATTTCATTTANTGTGTTT
GTTCATTGTTTGAAGATGAGAGATTTTTATGTCATGCTGATTTCATTTAC
AACTTACACAGGATTGTTCATATCTATGGCAGCTGCAAAGAATGACTGGC
AGATATACTCAGATGAGAAAAACTACAATCATAGAACCAATTTTGTTTGG
ATTTATGTTCTGTCGTTATATGTTATTGGATACTGAAGATCAGCTCATTT
ACATGAAAACTTGTTTGAGAGCCTTCAACACATCGTTTTGTGATGCAATT
TACCAGAATGGTACTGCCTTTAAGGCTGAACAGAGTGAACTCCAGAATGA
GTCAGCCAAATGGAAAGTGTATTTGAGTATTGTCCGGACTATACCGCCTG
TTATAATGACAATCATCTACTCATCTTGGTCAGATTATGTTGGTCGGAAA
AATGTTATTGTACTGCCTGTAATCGGATCCTCTATATCAGCAATGAGTTT
TATATTAAATTCACAATACATTCAATCACCTGTTTACTATATATTGGTTG
GTGAATTATTTGCTGCTCCTTTTGGAAACTTTGTTGCAATGATTTCAGCT
ACTTTTTGTTATGCAGCTGATATTACACCGATATCTTTCCGTACGCAAAG
GACTGTTATTTTGGAATCAATGATATACATTGCAGGTGCAATTGGACATT
TTAGTGGTGGACAGATATTGTATAACTTCGGTTTTCAATATGTTTATGGA
TTAACTTTATTCATTGATATCCTTCAAATCATTTACTGGATGTTTATTGA
AGAATCTTATGAATCAACCGTGCAGCAAAAGAAGAAAAGCTTACTGGAAA
TGTTTACTTTAGAAACTTTCACTAAAGTCTTCAAATTTTTGAGCAAAAGT
CGAGATGGTAATAGAAGAAGCATAATTTGGACCTTGTTTGTTTGCTTCTC
GTTCAGTTCTCTCTATATTTGATCAAACTTGAAAATGAGGATAGGAAGCG
AGAAGATTGTTGCCCTGCTGCTTTTGAAGGAACACCTTTGTTGAAAAGTC
AAACCTTCAACAAAGAAAGCAATGATGACTATTCATCGACTGACAATCTC
TGAGGAGATTATTTTCACTGATCTCATCTGTTGAAGTTTTGGTATCATTG
TTCTCTGGGGTTACCATCACAAGTATTTATAAAACTACGGTGGACATTGA
GCCTGCATTTGTCTTTTATCTCGTTGGTGCTTCTTCAATTTTGCCATTTT
GTTTGACTTTCTGGAGCATGGTCTTTTGGAGTCGGAGTTGCAATAGCTGT
TATCCGTGGAAAACTATCCAAAATTGCTGCATTTGATGAGCAAGATTTCA
TGACTTTGAACAGTGCAACAATACTTTATTTGTTGCACACACCATTTCAA
TTCCTTCCAACACAAATTGGATACTTTCTTGGTGGAACTCTGCTGTTGAA
ATTTCTTGGCTCGCTGTTCATCAATCTCGTGTTTGTTCATTGTTTGAAGA
TGAGAGATTTTTATGTCATGCTGATTTCATTTANTGTGTTTGTTCATTGT
TTGAAGATGAGAGATTTTTATGTCATGCTGATTTCATTTACAACTTACAC
AGGATTGTTCATATCTATGGCAGCTGCAAAGAATGACTGGCAGATATACT
CAGATGAGAAAAACTACAATCATAGAACCAATTTTGTTTGGATTTATGTT
CTGTCGTTATATGTTATTGGATACTGAAGATCAGCTCATTTACATGAAAA
CTTGTTTGAGAGCCTTCAACACATCGTTTTGTGATGCAATTTACCAGAAT
GGTACTGCCTTTAAGGCTGAACAGAGTGAACTCCAGAATGAGTCAGCCAA
ATGGAAAGTGTATTTGAGTATTGTCCGGACTATACCGCCTGTTATAATGA
CAATCATCTACTCATCTTGGTCAGATTATGTTGGTCGGAAAAATGTTATT
GTACTGCCTGTAATCGGATCCTCTATATCAGCAATGAGTTTTATATTAAA
TTCACAATACATTCAATCACCTGTTTACTATATATTGGTTGGTGAATTAT
TTGCTGCTCCTTTTGGAAACTTTGTTGCAATGATTTCAGCTACTTTTTGT
TATGCAGCTGATATTACACCGATATCTTTCCGTACGCAAAGGACTGTTAT
TTTGGAATCAATGATATACATTGCAGGTGCAATTGGACATTTTAGTGGTG
GACAGATATTGTATAACTTCGGTTTTCAATATGTTTATGGATTAACTTTA
TTCATTGATATCCTTCAAATCATTTACTGGATGTTTATTGAAGAATCTTA
TGAATCAACCGTGCAGCAAAAGAAGAAAAGCTTACTGGAAATGTTTACTT
TAGAAACTTTCACTAAAGTCTTCAAATTTTTGAGCAAAAGTCGAGATGGT
AATAGAAGAAGCATAATTTGGACCTTGTTTGTTTGCTTCTCGTTCAGTTC
TCTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034421XLOC_034421Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054641-exon-scaffold_243-1575043694:452297..453218TCONS_00054641-exon-scaffold_243-1575043694:452297..453218Clytia hemisphaericaexon
TCONS_00054641-exon-scaffold_243-1575043694:451686..451994TCONS_00054641-exon-scaffold_243-1575043694:451686..451994Clytia hemisphaericaexon
TCONS_00054641-exon-scaffold_243-1575043694:451301..451384TCONS_00054641-exon-scaffold_243-1575043694:451301..451384Clytia hemisphaericaexon
TCONS_00054641-exon-scaffold_243-1575043694:450828..450984TCONS_00054641-exon-scaffold_243-1575043694:450828..450984Clytia hemisphaericaexon
TCONS_00054641-exon-scaffold_243-1575043694:448641..449607TCONS_00054641-exon-scaffold_243-1575043694:448641..449607Clytia hemisphaericaexon
TCONS_00054641-exon-scaffold_243-1510915933:452297..453218TCONS_00054641-exon-scaffold_243-1510915933:452297..453218Clytia hemisphaericaexon
TCONS_00054641-exon-scaffold_243-1510915933:451686..451994TCONS_00054641-exon-scaffold_243-1510915933:451686..451994Clytia hemisphaericaexon
TCONS_00054641-exon-scaffold_243-1510915933:451301..451384TCONS_00054641-exon-scaffold_243-1510915933:451301..451384Clytia hemisphaericaexon
TCONS_00054641-exon-scaffold_243-1510915933:450828..450984TCONS_00054641-exon-scaffold_243-1510915933:450828..450984Clytia hemisphaericaexon
TCONS_00054641-exon-scaffold_243-1510915933:448641..449607TCONS_00054641-exon-scaffold_243-1510915933:448641..449607Clytia hemisphaericaexon
TCONS_00054641-exon-scaffold_243-1491911889:452297..453218TCONS_00054641-exon-scaffold_243-1491911889:452297..453218Clytia hemisphaericaexon
TCONS_00054641-exon-scaffold_243-1491911889:451686..451994TCONS_00054641-exon-scaffold_243-1491911889:451686..451994Clytia hemisphaericaexon
TCONS_00054641-exon-scaffold_243-1491911889:451301..451384TCONS_00054641-exon-scaffold_243-1491911889:451301..451384Clytia hemisphaericaexon
TCONS_00054641-exon-scaffold_243-1491911889:450828..450984TCONS_00054641-exon-scaffold_243-1491911889:450828..450984Clytia hemisphaericaexon
TCONS_00054641-exon-scaffold_243-1491911889:448641..449607TCONS_00054641-exon-scaffold_243-1491911889:448641..449607Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054641-proteinTCONS_00054641-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_243supercontigscaffold_243:448641..453218 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.0523 1.93369 3.80199 4.34953 17.0564 11.5455 8.24293 7.96784 4.19753 5.29734 4.43836 2.29086 3.91489 3.94468 3.12329 4.35038 4.88428 3.90761 2.8114 3.28485 4.72228 4.25409 10.5435 11.9073 2.4426 3.5977 6.31846 4.84373 10.2947 11.676
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054641 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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