|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054671 ID=TCONS_00054671|Name=TCONS_00054671|organism=Clytia hemisphaerica|type=transcript|length=452bp
AGCAGAAGGAtgcttaggcaaaaatagTTTGTATTTTACAAAGTTATCCG
TTATGGATATACTCTCGCCCAACTATTTGTTTAGTTCGTGGAGGACATAT
CGCTCCATCCCAATCAGACTTCGAATTGACGAAAGGGGAAGATGTCATTA
TCAAAGTGAACTTGTATCCTTATATCGATGAACATAGTGATTGGGTAAGT
GTATACTATGCAGATCATGAAAATTCTTCAATAGACGCCATCTGGAATGA
TGATACTGGTGTAACGGAGCACGGAATCAACAAGTTTGGTCAGCGTTTCA
TGGTTACATACACCAAAGATAAAAGTGTGGAGGTGGAGATCAAAGAAATA
TCACGGTCAATGGTTCTCTACGTCTCAACTGTCTTCCTCAACGCAAAAGG
TCAAATCAAAAATGGTCCACTCTATTCTACATTTAGAATCACACTTAGGA
AA Run BLAST on NCBI transcript from alignment at scaffold_243:953165..954204- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054671 ID=TCONS_00054671|Name=TCONS_00054671|organism=Clytia hemisphaerica|type=transcript|length=1040bp|location=Sequence derived from alignment at scaffold_243:953165..954204- (Clytia hemisphaerica)
AGCAGAAGGATGCTTAGGCAAAAATAGGTATGTTGATGATTGTGACAAAT
NCTCTCTTTTTGGCTTCTACATACGAAAAATGGAATGCAGAAAGCAGAAG
GATGCTTAGGCAAAAATAGGTACGTTGATGATTGTGACAAATTCTTTTTT
ATATCCCTTTCTGTGAGTTGACTGAATCTAGGTATGTAAGTTAGGGGATT
TCGCATTTCATGAAATAAGATCCTTATTTGTTGTAATTGGAAACGATATC
GATGGCTTGATTGTTTTGATTTCTACGGAAACATCAATAATGCTTAAAAT
GCATTTTAACGTCGGTAGAGTCTGCACCACTAACACAACTTTCAACAAAC
GAGAAAGTGAAAGATGAATTCTGTTAGATTGTTATCTTTGCTTTCTTTGC
TTGCTCAAAGTTTATGCTCAGGTAAATCTTTTAATCATTCAAAGACCTGA
AATTTCCTGACACTCTTGTTTACTTATTCATACCTTCCAGAAATCATAGC
AACGCCTGGATTGTAATTGTTATTGGCAGATTTTCTGATATTTATTCCAT
TTTTATATCCAAACTGGACAGTATACCTCTAACTCCTTTGAACTTTAATC
TTTCTCTCTTTGTAGTTTGTATTTTACAAAGTTATCCGTTATGGATATAC
TCTCGCCCAACTATTTGTTTAGTTCGTGGAGGACATATCGCTCCATCCCA
ATCAGACTTCGAATTGACGAAAGGGGAAGATGTCATTATCAAAGTGAACT
TGTATCCTTATATCGATGAACATAGTGATTGGGTAAGTGTATACTATGCA
GATCATGAAAATTCTTCAATAGACGCCATCTGGAATGATGATACTGGTGT
AACGGAGCACGGAATCAACAAGTTTGGTCAGCGTTTCATGGTTACATACA
CCAAAGATAAAAGTGTGGAGGTGGAGATCAAAGAAATATCACGGTCAATG
GTTCTCTACGTCTCAACTGTCTTCCTCAACGCAAAAGGTCAAATCAAAAA
TGGTCCACTCTATTCTACATTTAGAATCACACTTAGGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054671-exon-scaffold_243-1575043694:954178..954204 | TCONS_00054671-exon-scaffold_243-1575043694:954178..954204 | Clytia hemisphaerica | exon |
| TCONS_00054671-exon-scaffold_243-1575043694:953165..953589 | TCONS_00054671-exon-scaffold_243-1575043694:953165..953589 | Clytia hemisphaerica | exon |
| TCONS_00054671-exon-scaffold_243-1510915933:954178..954204 | TCONS_00054671-exon-scaffold_243-1510915933:954178..954204 | Clytia hemisphaerica | exon |
| TCONS_00054671-exon-scaffold_243-1510915933:953165..953589 | TCONS_00054671-exon-scaffold_243-1510915933:953165..953589 | Clytia hemisphaerica | exon |
| TCONS_00054671-exon-scaffold_243-1491911889:954178..954204 | TCONS_00054671-exon-scaffold_243-1491911889:954178..954204 | Clytia hemisphaerica | exon |
| TCONS_00054671-exon-scaffold_243-1491911889:953165..953589 | TCONS_00054671-exon-scaffold_243-1491911889:953165..953589 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_243 | supercontig | scaffold_243:953165..954204 - |
Blast
The following BLAST results are available for this feature:
|
