TCONS_00054707 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054707
Unique NameTCONS_00054707
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3000

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054707 ID=TCONS_00054707|Name=TCONS_00054707|organism=Clytia hemisphaerica|type=transcript|length=3000bp
GAAATATTAGTATAGAAATTGCactttttatcagatttaataAGTTTTTT
AtaaaatgtCCCTTGAAAAGATCTACCGAGGTAATTCTTTACATTGTAAT
TTTTAGGTTGATCAGACTGGTGTTGCTCAGGTGTGGAAGTCATGCTATGA
GTTGATGACAAGAACGTAGATGTTGACGGTCCAGCATCTTCAACAAGACT
GTTAGACTCAAGGTTTTGTTTTGGTGAAAGTTGACGTGGTGGTGACGACA
AATCAGCATCCTCATCATCAAgcgaaataaaaacatcaaaatcaacaGCA
GTCGCATCAGCATCAGCATCATGACATTCAGAATTTGATGTAGTAGCAGG
TTGGTCAATAGGTTGTTGTGAGCAATTTGCTGTTGTTTTCTCGTCGTCAG
CTTTTCCCTTTACAAGGTTTTGTTTTGGtgaaagttttgataaaaaagtc
atcaattgAGTTTGTTGTTTACTGTTGTTGGTTTTTGGAGTTTTCAATTC
AGGATCAGGTTGATGTTTTTCTGATAAATCAAgagatgattttcttcttt
ttgtacaAGTGGGTAGTAGAGATGATGAAGATGATGGCAGAGACTCACTG
TTAAATCTTTTGCTCCTCTTTTCAAAGTCATACCCCATGTTCTTCGTTGG
ATAAGGATGCTGCTCTGTGGGCCTTCCGTCAACAAAATGTTCACTGCAAA
CCCTTGCATCCTTACTTGGGTCCAGAAGTTTATTCTTTGATCCTGGAGCC
AAACGATTAATGTTTCTCCTCCAGATTGACCTTTTCTCTGGGTGCTTTTT
GAGGGTTGGGACCGGAAAAAGTTGGAAAGGTGGCTCTTCGACATGATTGA
TGTTCACTTTCTTCCACTTCTTCAGCTTGTAAGATCCATTTTGGCAACCA
ATAACAATACAATGATAAGACATTTTGAGCTTTCCAGTGAAACACAGCCT
GCTTCGCTTGACTAAAACCaccattatgaaaattttgatcgaaattttca
tgatattttcaCACGGAACCGTAACCGTAGCAACAAGCTACTTATGAAAT
CTGTGTATTAGTTTATTTAAAGAATATTTCACGGTGTTTCCGTATGTTTA
ATTCTCCAAGTTCTCTGGAAGCTAATGGAGGGAGAGGTACTGTTAATGAC
GGCTAGATCTTTGAACTGCAACCAGGGTACCAAATAATGGCAGACATCCT
GTCCTACAGGAAACTACTGGCTAAATTGGAGGCTTATGAAATTGAGCGTG
CTGTTATCACATTTTTCTTCCATTATTATTTGATGGATTTGAATTATCCC
CTGTGTTGGTCAGCGGTGCTCACATTTTGGCAATTTGCAGTCCTGGGAGA
GGAAGATATGGAAAATGTTCAGGAAGAACTGAAAGAAATTTGGAAGAAAA
ATTGGGGAGATTTTTGTGCATTTNGGAAGAACTGAAAGAAATTTGGAAGA
AAAATTGGGGAGATTTTTGTGCATCTTTGGACAGCATGGAAGATGAATAA
TGTGAAATTGTCCTGGACTATTGAAAcggtttcttttgtttggatatttt
cttcgtATCTTGTGTCAGttaattgaaattttctgttttgtgTTTCTGCT
AGACGGTTAAATTCTGTTGTTTCTGAGTCGGattaaaatggtaaaaaaat
ttcccaGAGTAAGTAATGTTCTTGCGAGCTTCTTATCAACATTATGCCTT
GTACCTTGCCTTTTTACTAGATGGGATTCTCCTAAACTCGAACTTGTAGT
TTTTGCGAGTTAAAAAACAACAATTATTGACCACATTTCTTCTTCATTCA
ATCTCCATTTTTTTAGGAATCCACGTTAGAATATTATTTCGCAATTGCAA
AAATGGATGAAAAGATTGTCGAAAACGTCATCAATATCATGACGGTTTAC
AACAACACCAACAAGTTTGAGTGTAAAATGAGCCAGTTTAAAGAGCTTCG
TAATCTTCCGTCAGAAGAAGTAAGAGCAATTCTGGAGGACTGCTTCTCAG
AGCCGAAGCAAATCAACAAGAAGGCAAAAGCGCGAAAAGAGATTCAAGAT
GTTAAACTCGCAATTTCGGACAGCGTTGGAATAGAGGATTGGGATGTTAT
CACAGAAAGCTACCCTATATTCGCAGAAGAAGAATCTTACGCCCATTTCT
CAGGACGAGTAAAACGCGGGAAACCTATTCCAGACTCGTTTAAGACATTC
ATTCGAGGTGTTTTAAAGGACACAGAAAAAGAAGAACGTAATATTGAGCT
TTTGGAGATAGACTTGAACTCGCCAAGACCTTGCTTCGATAAAATTCGTT
CCTTGGAGCAACCGATCAAAAAGTTGATTGTGAACACCAAGACAGATCAC
CCAGAACATTTTTATGACGATTTGGTTCGACAATACATTTCGGTCAATGT
GCTTTCGGGTGAAATCGGTGACCATCAAATCACTTTTATAGTGAACCCTG
ATACAGAGGAATGGATGTCATTGACTTTGAAACTAAAGGCTATTCTTACA
AGTGCAAAACTAAACTACAGAGAAGTCCTGGTTACCGAAGAAAATGGAAA
GTCCGTCTTGATGGTTGTTGGAAGCACTACAAAACCAAGCAAACGGTTTA
CAGCAACCAATGGACACTATTTGGAAGAGATCAATAAACTTGATGGTTGT
GTTAATGGCTTATTCGTTCATATATTTAATAACAATGGTAACACAATCTC
TGAAATTCTAAACAATGTAAATAACAGCATAGTGCTCATCGATAACGACC
TGAAAGAGTTGGAAATTGCGTACAGTCTCTCCACCGACGATGTTAATTTC
GAGCAAGATGTACTTGAGAGTCTCGAGAGCAACGAAACGGTGAACGAAAC
TACCTGATTATATAtaatgattaatttttttctcaggttttattttaata
tattttttgttagAAGCCTTTCAAAATGAGAAATGAATTAGATTAAAATT
TTGTAGAAAGATTTTAGTGGTGCGAAACCGTTCCAAATTTTTATGCCTTC
Run BLAST on NCBI

protein sequence of TCONS_00054707-protein

>TCONS_00054707-protein ID=TCONS_00054707-protein|Name=TCONS_00054707-protein|organism=Clytia hemisphaerica|type=polypeptide|length=334bp
MDEKIVENVINIMTVYNNTNKFECKMSQFKELRNLPSEEVRAILEDCFSE
PKQINKKAKARKEIQDVKLAISDSVGIEDWDVITESYPIFAEEESYAHFS
GRVKRGKPIPDSFKTFIRGVLKDTEKEERNIELLEIDLNSPRPCFDKIRS
LEQPIKKLIVNTKTDHPEHFYDDLVRQYISVNVLSGEIGDHQITFIVNPD
TEEWMSLTLKLKAILTSAKLNYREVLVTEENGKSVLMVVGSTTKPSKRFT
ATNGHYLEEINKLDGCVNGLFVHIFNNNGNTISEILNNVNNSIVLIDNDL
KELEIAYSLSTDDVNFEQDVLESLESNETVNETT
Run BLAST on NCBI

transcript from alignment at scaffold_244:8442..12631+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054707 ID=TCONS_00054707|Name=TCONS_00054707|organism=Clytia hemisphaerica|type=transcript|length=4190bp|location=Sequence derived from alignment at scaffold_244:8442..12631+ (Clytia hemisphaerica)
GAAATATTAGTATAGAAATTGCactttttatcagatttaataAGTTTTTT
AtaaaatgtCCCTTGAAAAGATCTACCGAGGTAATTCTTTACATTGTAAT
TTTTAGGTTGATCAGACTGGTGTTGCTCAGGTGTGGAAGTCATGCTATGA
GTTGATGACAAGAACGTAGATGTTGACGGTCCAGCATCTTCAACAAGACT
GTTAGACTCAAGGTTTTGTTTTGGTGAAAGTTGACGTGGTGGTGACGACA
AATCAGCATCCTCATCATCAAgcgaaataaaaacatcaaaatcaacaGCA
GTCGCATCAGCATCAGCATCATGACATTCAGAATTTGATGTAGTAGCAGG
TTGGTCAATAGGTTGTTGTGAGCAATTTGCTGTTGTTTTCTCGTCGTCAG
CTTTTCCCTTTACAAGGTTTTGTTTTGGtgaaagttttgataaaaaagtc
atcaattgAGTTTGTTGTTTACTGTTGTTGGTTTTTGGAGTTTTCAATTC
AGGATCAGGTTGATGTTTTTCTGATAAATCAAgagatgattttcttcttt
ttgtacaAGTGGGTAGTAGAGATGATGAAGATGATGGCAGAGACTCACTG
TTAAATCTTTTGCTCCTCTTTTCAAAGTCATACCCCATGTTCTTCGTTGG
ATAAGGATGCTGCTCTGTGGGCCTTCCGTCAACAAAATGTTCACTGCAAA
CCCTTGCATCCTTACTTGGGTCCAGAAGTTTATTCTTTGATCCTGGAGCC
AAACGATTAATGTTTCTCCTCCAGATTGACCTTTTCTCTGGGTGCTTTTT
GAGGGTTGGGACCGGAAAAAGTTGGAAAGGTGGCTCTTCGACATGATTGA
TGTTCACTTTCTTCCACTTCTTCAGCTTGTAAGATCCATTTTGGCAACCA
ATAACAATACAATGATAAGACATTTTGAGCTTTCCAGTGAAACACAGCCT
GCTTCGCTTGACTAAAACCaccattatgaaaattttgatcgaaattttca
tgatattttcaCACGGAACCGTAACCGTAGCAACAAGCTACTTATGAAAT
CTGTGTATTAGTTTATTTAAAGAATATTTCACGGTGTTTCCGTATGTTTA
ATTCTCCAAGTTCTCTGGAAGCTAATGGAGGGAGAGGTACTGTTAATGAC
GGCTAGATCTTTGAACTGCAACCAGGGTACCAAATAATGGCAGACATCCT
GTCCTACAGGAAACTACTGGCTAAATTGGAGGCTTATGAAATTGAGCGTG
CTGTTATCACATTTTTCTTCCATTATTATTTGATGGATTTGAATTATCCC
CTGTGTTGGTCAGCGGTGCTCACATTTTGGCAATTTGCAGTCCTGGGAGA
GGAAGATATGGAAAATGTTCAGGAAGAACTGAAAGAAATTTGGAAGAAAA
ATTGGGGAGATTTTTGTGCATTTNGGAAGAACTGAAAGAAATTTGGAAGA
AAAATTGGGGAGATTTTTGTGCATCTTTGGACAGCATGGAAGATGAATAA
TGTGAAATTGTCCTGGACTATTGAAAcggtttcttttgtttggatatttt
cttcgtATCTTGTGTCAGttaattgaaattttctgttttgtgTTTCTGCT
AGACGGTTAAATTCTGTTGTTTCTGAGTCGGattaaaatggtaaaaaaat
ttcccaGAGTAAGTAATGTTCTTGCGAGCTTCTTATCAACATTATGCCTT
GTACCTTGCCTTTTTACTAGATGGGATTCTCCTAAACTCGAACTTGTAGT
TTTTGCGAGTTAAAAAACAACAATTATTGACCACATTTCTTCTTCATTCA
ATCTCCATTTTTTTAGGAATCCACGTTAGAATATTATTTCGCAATTGCAA
AAATGGATGAAAAGATTGTCGAAAACGTCATCAATATCATGACGGTTTAC
AACAACACCAACAAGTTTGAGTGTAAAATGAGCCAGTTTAAAGAGCTTCG
TAATCTTCCGTCAGAAGAAGTAAGAGCAATTCTGGAGGACTGCTTCTCAG
AGCCGAAGCAAATCAACAAGAAGGCAAAAGCGCGAAAAGAGATTCAAGAT
GTTAAACTCGCAATTTCGGACAGCGTTGGAATAGAGGATTGGGATGTTAT
CACAGAAAGGTATAAGATTTTATTTAAGCCAAAAACATGCTTTTGTAATT
TAATATACAGCTTAAAATGCTCTTTTTTAATATGCCAAATTCAACTCTCT
CTATTGACTATGCTTAGGTCATTTGAACTCATCTGATTCCAAAAATATAA
TTTTTCCAAGCTTTACTGGGTCGAAAAGGTACTGCCTCTAGAAGGTGAAT
CCCAGCAAAATAGGTGGTTTTCAGCTCCATCTCCTATTGTTGACTGGGGA
GGAATCATTATACTGTTGGAATCAGTATAATTCCAAAGTATTTCTGTCCC
AAAAATGAGGCTTTGTCAACTAAAAAAATATGTGAAGTAACTTTATTTTC
TCTATTTTAGCTACCCTATATTCGCAGAAGAAGAATCTTACGCCCATTTC
TCAGGACGAGTAAAACGCGGGAAACCTATTCCAGACTCGTTTAAGACATT
CATTCGAGGTGTTTTAAAGGACACAGAAAAAGAAGAACGTAATATTGAGC
TTTTGGAGATAGACTTGAACTCGCCAAGACCTTGCTTCGATAAAATTCGT
TCCTTGGAGCAACCGATCAAAAAGTTGATTGTGAACACCAAGACAGTAAG
CATCTATGTTTTTTCTTATGTAAAAAAGATAAACTTCCTTCAATATCTTT
GATCTTTTAACTTAATTATTCATTGTCTCGGTGCTATTTACCATTTTCCT
CTACGTACAAACAAAGATTCCCTTATAGTTTTAGAATTCAAATCCAAGCA
AAGTTTGCAGAATGCACAATTTTAGTGCTAAGAATCCTACATGTGCAAAA
GGGCGTTTTTCAACAACCTCGACTatacattttttaactttactTTTAGG
ATCACCCAGAACATTTTTATGACGATTTGGTTCGACAATACATTTCGGTC
AATGTGCTTTCGGGTGAAATCGGTGACCATCAAATCACTTTTATAGTGAA
CCCTGATACAGAGGAATGGATGTCATTGACTTTGAAACTAAAGGCTATTC
TTACAAGTGCAAAACTAAACTACAGAGAAGTCCTGGTTACCGAAGAAAAT
GGTTAGTACATAGCTACACATACTGTACTTACATACTTATAGTCCTTCCt
tccattttcatttggataatGCCTTTTTACAGACTTCGATTAAATAGTGC
TACCACTACTCTCAAAACACTTAAAAATGTCGATCGTTTTTTGCCTTGAG
TAGAGTAAGAAAAGAAACTGCGGCTTTCGAACAAGCGCTCTATTTCATTA
CTTTGACGCAATCGCTAACAATTCAGACAattatccaaataaaaatagat
CGACTATAATCGAATTCATTCACCGACTGTAAGGAAGGTTGCACCTATTT
TTCATCTTACAGAGGCTGTATCAGGTATTTTTCTGTGACCTTTTTAGGAA
AGTCCGTCTTGATGGTTGTTGGAAGCACTACAAAACCAAGCAAACGGTTT
ACAGCAACCAATGGACACTATTTGGAAGAGATCAATAAACTTGATGGTTG
TGTTAATGGCTTATTCGTTCATATATTTAATAACAATGGTAAATTTTTAT
TCTATTAGTTTTCATTTGGCGAACATCCTGAGAAAGAATCTATAAAGGGC
CTCCTATAAAGGGactataaaattcaaaatagaaaGTCTAGATATATCAT
ATGTATTCTTTTTCGTACTGGAagaaaattgagttttgataatATGGGGA
TCTACACTTGATGCTAAAATAATACTTCAAATACCTTAGAATGAATGATC
AACCACTTTTTTATCTGTTTGTTATAGGTAACACAATCTCTGAAATTCTA
AACAATGTAAATAACAGCATAGTGCTCATCGATAACGACCTGAAAGAGTT
GGAAATTGCGTACAGTCTCTCCACCGACGATGTTAATTTCGAGCAAGATG
TACTTGAGAGTCTCGAGAGCAACGAAACGGTGAACGAAACTACCTGATTA
TATAtaatgattaatttttttctcaggttttattttaatatattttttgt
tagAAGCCTTTCAAAATGAGAAATGAATTAGATTAAAATTTTGTAGAAAG
ATTTTAGTGGTGCGAAACCGTTCCAAATTTTTATGCCTTC

Coding sequence (CDS) from alignment at scaffold_244:8442..12631+

>TCONS_00054707 ID=TCONS_00054707|Name=TCONS_00054707|organism=Clytia hemisphaerica|type=CDS|length=5025bp|location=Sequence derived from alignment at scaffold_244:8442..12631+ (Clytia hemisphaerica)
ATGGATGAAAAGATTGTCGAAAACGTCATCAATATCATGACGGTTTACAA
CAACACCAACAAGTTTGAGTGTAAAATGAGCCAGTTTAAAGAGCTTCGTA
ATCTTCCGTCAGAAGAAGTAAGAGCAATTCTGGAGGACTGCTTCTCAGAG
CCGAAGCAAATCAACAAGAAGGCAAAAGCGCGAAAAGAGATTCAAGATGT
TAAACTCGCAATTTCGGACAGCGTTGGAATAGAGGATTGGGATGTTATCA
CAGAAAGCTACCCTATATTCGCAGAAGAAGAATCTTACGCCCATTTCTCA
GGACGAGTAAAACGCGGGAAACCTATTCCAGACTCGTTTAAGACATTCAT
TCGAGGTGTTTTAAAGGACACAGAAAAAGAAGAACGTAATATTGAGCTTT
TGGAGATAGACTTGAACTCGCCAAGACCTTGCTTCGATAAAATTCGTTCC
TTGGAGCAACCGATCAAAAAGTTGATTGTGAACACCAAGACAGATCACCC
AGAACATTTTTATGACGATTTGGTTCGACAATACATTTCGGTCAATGTGC
TTTCGGGTGAAATCGGTGACCATCAAATCACTTTTATAGTGAACCCTGAT
ACAGAGGAATGGATGTCATTGACTTTGAAACTAAAGGCTATTCTTACAAG
TGCAAAACTAAACTACAGAGAAGTCCTGGTTACCGAAGAAAATGGAAAGT
CCGTCTTGATGGTTGTTGGAAGCACTACAAAACCAAGCAAACGGTTTACA
GCAACCAATGGACACTATTTGGAAGAGATCAATAAACTTGATGGTTGTGT
TAATGGCTTATTCGTTCATATATTTAATAACAATGGTAACACAATCTCTG
AAATTCTAAACAATGTAAATAACAGCATAGTGCTCATCGATAACGACCTG
AAAGAGTTGGAAATTGCGTACAGTCTCTCCACCGACGATGTTAATTTCGA
GCAAGATGTACTTGAGAGTCTCGAGAGCAACGAAACGGTGAACGAAACTA
CCTGAATGGATGAAAAGATTGTCGAAAACGTCATCAATATCATGACGGTT
TACAACAACACCAACAAGTTTGAGTGTAAAATGAGCCAGTTTAAAGAGCT
TCGTAATCTTCCGTCAGAAGAAGTAAGAGCAATTCTGGAGGACTGCTTCT
CAGAGCCGAAGCAAATCAACAAGAAGGCAAAAGCGCGAAAAGAGATTCAA
GATGTTAAACTCGCAATTTCGGACAGCGTTGGAATAGAGGATTGGGATGT
TATCACAGAAAGCTACCCTATATTCGCAGAAGAAGAATCTTACGCCCATT
TCTCAGGACGAGTAAAACGCGGGAAACCTATTCCAGACTCGTTTAAGACA
TTCATTCGAGGTGTTTTAAAGGACACAGAAAAAGAAGAACGTAATATTGA
GCTTTTGGAGATAGACTTGAACTCGCCAAGACCTTGCTTCGATAAAATTC
GTTCCTTGGAGCAACCGATCAAAAAGTTGATTGTGAACACCAAGACAGAT
CACCCAGAACATTTTTATGACGATTTGGTTCGACAATACATTTCGGTCAA
TGTGCTTTCGGGTGAAATCGGTGACCATCAAATCACTTTTATAGTGAACC
CTGATACAGAGGAATGGATGTCATTGACTTTGAAACTAAAGGCTATTCTT
ACAAGTGCAAAACTAAACTACAGAGAAGTCCTGGTTACCGAAGAAAATGG
AAAGTCCGTCTTGATGGTTGTTGGAAGCACTACAAAACCAAGCAAACGGT
TTACAGCAACCAATGGACACTATTTGGAAGAGATCAATAAACTTGATGGT
TGTGTTAATGGCTTATTCGTTCATATATTTAATAACAATGGTAACACAAT
CTCTGAAATTCTAAACAATGTAAATAACAGCATAGTGCTCATCGATAACG
ACCTGAAAGAGTTGGAAATTGCGTACAGTCTCTCCACCGACGATGTTAAT
TTCGAGCAAGATGTACTTGAGAGTCTCGAGAGCAACGAAACGGTGAACGA
AACTACCTGAATGGATGAAAAGATTGTCGAAAACGTCATCAATATCATGA
CGGTTTACAACAACACCAACAAGTTTGAGTGTAAAATGAGCCAGTTTAAA
GAGCTTCGTAATCTTCCGTCAGAAGAAGTAAGAGCAATTCTGGAGGACTG
CTTCTCAGAGCCGAAGCAAATCAACAAGAAGGCAAAAGCGCGAAAAGAGA
TTCAAGATGTTAAACTCGCAATTTCGGACAGCGTTGGAATAGAGGATTGG
GATGTTATCACAGAAAGCTACCCTATATTCGCAGAAGAAGAATCTTACGC
CCATTTCTCAGGACGAGTAAAACGCGGGAAACCTATTCCAGACTCGTTTA
AGACATTCATTCGAGGTGTTTTAAAGGACACAGAAAAAGAAGAACGTAAT
ATTGAGCTTTTGGAGATAGACTTGAACTCGCCAAGACCTTGCTTCGATAA
AATTCGTTCCTTGGAGCAACCGATCAAAAAGTTGATTGTGAACACCAAGA
CAGATCACCCAGAACATTTTTATGACGATTTGGTTCGACAATACATTTCG
GTCAATGTGCTTTCGGGTGAAATCGGTGACCATCAAATCACTTTTATAGT
GAACCCTGATACAGAGGAATGGATGTCATTGACTTTGAAACTAAAGGCTA
TTCTTACAAGTGCAAAACTAAACTACAGAGAAGTCCTGGTTACCGAAGAA
AATGGAAAGTCCGTCTTGATGGTTGTTGGAAGCACTACAAAACCAAGCAA
ACGGTTTACAGCAACCAATGGACACTATTTGGAAGAGATCAATAAACTTG
ATGGTTGTGTTAATGGCTTATTCGTTCATATATTTAATAACAATGGTAAC
ACAATCTCTGAAATTCTAAACAATGTAAATAACAGCATAGTGCTCATCGA
TAACGACCTGAAAGAGTTGGAAATTGCGTACAGTCTCTCCACCGACGATG
TTAATTTCGAGCAAGATGTACTTGAGAGTCTCGAGAGCAACGAAACGGTG
AACGAAACTACCTGAATGGATGAAAAGATTGTCGAAAACGTCATCAATAT
CATGACGGTTTACAACAACACCAACAAGTTTGAGTGTAAAATGAGCCAGT
TTAAAGAGCTTCGTAATCTTCCGTCAGAAGAAGTAAGAGCAATTCTGGAG
GACTGCTTCTCAGAGCCGAAGCAAATCAACAAGAAGGCAAAAGCGCGAAA
AGAGATTCAAGATGTTAAACTCGCAATTTCGGACAGCGTTGGAATAGAGG
ATTGGGATGTTATCACAGAAAGCTACCCTATATTCGCAGAAGAAGAATCT
TACGCCCATTTCTCAGGACGAGTAAAACGCGGGAAACCTATTCCAGACTC
GTTTAAGACATTCATTCGAGGTGTTTTAAAGGACACAGAAAAAGAAGAAC
GTAATATTGAGCTTTTGGAGATAGACTTGAACTCGCCAAGACCTTGCTTC
GATAAAATTCGTTCCTTGGAGCAACCGATCAAAAAGTTGATTGTGAACAC
CAAGACAGATCACCCAGAACATTTTTATGACGATTTGGTTCGACAATACA
TTTCGGTCAATGTGCTTTCGGGTGAAATCGGTGACCATCAAATCACTTTT
ATAGTGAACCCTGATACAGAGGAATGGATGTCATTGACTTTGAAACTAAA
GGCTATTCTTACAAGTGCAAAACTAAACTACAGAGAAGTCCTGGTTACCG
AAGAAAATGGAAAGTCCGTCTTGATGGTTGTTGGAAGCACTACAAAACCA
AGCAAACGGTTTACAGCAACCAATGGACACTATTTGGAAGAGATCAATAA
ACTTGATGGTTGTGTTAATGGCTTATTCGTTCATATATTTAATAACAATG
GTAACACAATCTCTGAAATTCTAAACAATGTAAATAACAGCATAGTGCTC
ATCGATAACGACCTGAAAGAGTTGGAAATTGCGTACAGTCTCTCCACCGA
CGATGTTAATTTCGAGCAAGATGTACTTGAGAGTCTCGAGAGCAACGAAA
CGGTGAACGAAACTACCTGAATGGATGAAAAGATTGTCGAAAACGTCATC
AATATCATGACGGTTTACAACAACACCAACAAGTTTGAGTGTAAAATGAG
CCAGTTTAAAGAGCTTCGTAATCTTCCGTCAGAAGAAGTAAGAGCAATTC
TGGAGGACTGCTTCTCAGAGCCGAAGCAAATCAACAAGAAGGCAAAAGCG
CGAAAAGAGATTCAAGATGTTAAACTCGCAATTTCGGACAGCGTTGGAAT
AGAGGATTGGGATGTTATCACAGAAAGCTACCCTATATTCGCAGAAGAAG
AATCTTACGCCCATTTCTCAGGACGAGTAAAACGCGGGAAACCTATTCCA
GACTCGTTTAAGACATTCATTCGAGGTGTTTTAAAGGACACAGAAAAAGA
AGAACGTAATATTGAGCTTTTGGAGATAGACTTGAACTCGCCAAGACCTT
GCTTCGATAAAATTCGTTCCTTGGAGCAACCGATCAAAAAGTTGATTGTG
AACACCAAGACAGATCACCCAGAACATTTTTATGACGATTTGGTTCGACA
ATACATTTCGGTCAATGTGCTTTCGGGTGAAATCGGTGACCATCAAATCA
CTTTTATAGTGAACCCTGATACAGAGGAATGGATGTCATTGACTTTGAAA
CTAAAGGCTATTCTTACAAGTGCAAAACTAAACTACAGAGAAGTCCTGGT
TACCGAAGAAAATGGAAAGTCCGTCTTGATGGTTGTTGGAAGCACTACAA
AACCAAGCAAACGGTTTACAGCAACCAATGGACACTATTTGGAAGAGATC
AATAAACTTGATGGTTGTGTTAATGGCTTATTCGTTCATATATTTAATAA
CAATGGTAACACAATCTCTGAAATTCTAAACAATGTAAATAACAGCATAG
TGCTCATCGATAACGACCTGAAAGAGTTGGAAATTGCGTACAGTCTCTCC
ACCGACGATGTTAATTTCGAGCAAGATGTACTTGAGAGTCTCGAGAGCAA
CGAAACGGTGAACGAAACTACCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034468XLOC_034468Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054707-exon-scaffold_244-1491911889:8442..10550TCONS_00054707-exon-scaffold_244-1491911889:8442..10550Clytia hemisphaericaexon
TCONS_00054707-exon-scaffold_244-1510915933:8442..10550TCONS_00054707-exon-scaffold_244-1510915933:8442..10550Clytia hemisphaericaexon
TCONS_00054707-exon-scaffold_244-1575043694:8442..10550TCONS_00054707-exon-scaffold_244-1575043694:8442..10550Clytia hemisphaericaexon
TCONS_00054707-exon-scaffold_244-1491911889:10902..11136TCONS_00054707-exon-scaffold_244-1491911889:10902..11136Clytia hemisphaericaexon
TCONS_00054707-exon-scaffold_244-1510915933:10902..11136TCONS_00054707-exon-scaffold_244-1510915933:10902..11136Clytia hemisphaericaexon
TCONS_00054707-exon-scaffold_244-1575043694:10902..11136TCONS_00054707-exon-scaffold_244-1575043694:10902..11136Clytia hemisphaericaexon
TCONS_00054707-exon-scaffold_244-1491911889:11391..11592TCONS_00054707-exon-scaffold_244-1491911889:11391..11592Clytia hemisphaericaexon
TCONS_00054707-exon-scaffold_244-1510915933:11391..11592TCONS_00054707-exon-scaffold_244-1510915933:11391..11592Clytia hemisphaericaexon
TCONS_00054707-exon-scaffold_244-1575043694:11391..11592TCONS_00054707-exon-scaffold_244-1575043694:11391..11592Clytia hemisphaericaexon
TCONS_00054707-exon-scaffold_244-1491911889:11939..12079TCONS_00054707-exon-scaffold_244-1491911889:11939..12079Clytia hemisphaericaexon
TCONS_00054707-exon-scaffold_244-1510915933:11939..12079TCONS_00054707-exon-scaffold_244-1510915933:11939..12079Clytia hemisphaericaexon
TCONS_00054707-exon-scaffold_244-1575043694:11939..12079TCONS_00054707-exon-scaffold_244-1575043694:11939..12079Clytia hemisphaericaexon
TCONS_00054707-exon-scaffold_244-1491911889:12319..12631TCONS_00054707-exon-scaffold_244-1491911889:12319..12631Clytia hemisphaericaexon
TCONS_00054707-exon-scaffold_244-1510915933:12319..12631TCONS_00054707-exon-scaffold_244-1510915933:12319..12631Clytia hemisphaericaexon
TCONS_00054707-exon-scaffold_244-1575043694:12319..12631TCONS_00054707-exon-scaffold_244-1575043694:12319..12631Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054707-proteinTCONS_00054707-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_244supercontigscaffold_244:8442..12631 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.158726	0.0930008	0.285144	0.385888	1.79499	1.30346	0.99583	1.19781	0.546995	0.801582	0.795117	0.875331	0.332984	0.28188	0.211387	0.138909	0.620515	0.7424	0.145839	0.235731	0.1965	0.13175	0.052294	0.0971089	1.36822	1.04593	0.2726	0.218942	0.117899	0.100989
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054707 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top