TCONS_00054717 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054717
Unique NameTCONS_00054717
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1587

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054717 ID=TCONS_00054717|Name=TCONS_00054717|organism=Clytia hemisphaerica|type=transcript|length=1587bp
TTTTGTAAGCTCAGCGTATTATTCATTCTGTCAATTTGGTTTCAGTTTTA
TCAGTCATTGTAAGCAACTCAATTGTCTTAATTAATCTTTTCTAGTATAC
AAATCTATATAACTGATGACtaaagaaaaatgttgaaacaaaTAATATAC
ATTCTCCTAATAATGCTATTACTGCATAATCTGCGGTTAAAAGTAACTGG
ACTTATCCTTTCAAAGAGTAAAATTCAAATGTGTGAAGATCGTGGCCAAA
GTGCTGCTAAAGAAGGTATAGCTGGTGCATCTGATCCACATAATGTGGTC
GATGGTAAAGCATGTAAAAAGAAAATGGTTGTTTTGATGTCTGTAAAAAA
TGGTCAGaaagaaGGAACAGAGAAGTTGATGGCAACCGTATCACGTGTTC
GTGACGAAACAGAAGGCGAATTTGCAAAAATGTATAATCCTTTTGTGATC
CTGCTCTCCATGTCAGCTATCACTATTAATTATCCCTTCATTTACACCGG
TgatggagCTAATCATAGGCCTACTTGTGGCTATGTGTACAACGAAAAAA
AGAAGCGCATTCCAAACAGTCAGggCTTTTGCTGTATCTGTTCATTAGCA
GATAAACTGGACTATACGTTATCACAAGCTAGGCATCGCCAAAGGGGAGG
TGTGGCTTGCCAGTTTTTAACTAATAACCCTCAATCCTCTGCCCATTGTA
TGCGTCACGATGATTTGTGgtatTCTATCCACTATTTTAGACCATCTTAT
AAAGATTTCACAATTCACATAAGAGCTAAAGATCAAGAAACAACAGTCGA
AAATAATAAGACTGTAGTAAAGTGGGTCAATGGAGGTGAAATCGTTTTAA
GTCCCAGAAGAAAGGCCGGTGTTGGAAAAAATGGTAGGATCATTGCTCAT
TATGTCGGTACTTTTCAAACAAATACAGCGCTCCCAgttcttcaaagttt
ttatCTACTTGTACCATTTTTGTCGAAGAAGGCCACCACCGGTCCGACTG
ACCATGATCAAATGAAGtttAGCTTACTTCTTTTGGAGATATTGAGCCTA
ACCCAGGGCCGAGAGAGAAAGACAACATCTTAAATGTGTCTAGCCATCTA
CAAATCCTGCCTCATCTTGGCCATGGTGGTATCATAAATTATCGTCCAGG
AAACTCCACCTTCGTATTGAAGCTTGAATCCATGCAATATTACGCCTGTT
TGACTATCACAGGCTGCTTGTATGGAACTTCTCAGGAAAGAATATATTCT
GAACTTGGCTCTGCGAGCCTTACCGTcagttgttttgaaaagaatgatTT
ACAATCATGGCCGGaatatattgacattttagtgcattttaacgttcttc
agaatttaaagttcgggcgagaataattattttagcacttccactttctt
tcattgaataattcgattttagaggggttcggtggcttctatattccaag
ccttattcgagaaaattttaaatcctgagatcctaggGTCttaactctac
tttccaactgtagtttaaggcgcttaaaatcatttgtggtgtttaaaatt
tcgccgggaaatcccctttgtctaaaataaaagtaac
Run BLAST on NCBI

transcript from alignment at scaffold_244:127914..149074+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054717 ID=TCONS_00054717|Name=TCONS_00054717|organism=Clytia hemisphaerica|type=transcript|length=21161bp|location=Sequence derived from alignment at scaffold_244:127914..149074+ (Clytia hemisphaerica)
TTTTGTAAGCTCAGCGTATTATTCATTCTGTCAATTTGGTTTCAGTTTTA
TCAGTCATTGTAAGCAACTCAATTGTCTTAATTAATCTTTTCTAGTATAC
AAATCTATATAACTGATGACtaaagaaaaatgttgaaacaaaTAATATAC
ATTCTCCTAATAATGCTATTACTGCATAATCTGCGGTTAAAAGTAACTGG
ACTTATCCTTTCAAAGAGTAAAATTCAAATGTGTGAAGATCGTGGCCAAA
GTGCTGCTAAAGAAGGTATAGCTGGTGCATCTGATCCACATAATGTGGTC
GATGGTAAAGCATGTAAAAAGAAAATGGTTGTTTTGATGTCTGTAAAAAA
TGGTCAGGTATGTCTACTGTAAggtttttctattttataaCAAATAATTG
ACCCCATtacaaatctcaaaatttattttgtataaTTNAGGTTTTTCTAC
TTTATAACAAACAATTGACCCCATtacaaatctcaaaatttattttgcat
AATTTTCCATTCACTCAGCAGTGAATTGTTATTGAAATTCTTTAGATGAT
TTATCCTCGATCTTATAATATGACCTTTAGATTTCATAAAGAATTGTCTA
GAAAGTCAATAAAAGTCCGAAATTCTTTTGGTATAAACATTGAATTATTA
TTGagtttggataaccatcaaATATGAAAGTAGAGTTGAGAGTATTGTTT
CTCAATTGGTTCATAAAACTACCGGGtgtaaaggaaggttgaattccAAT
AAAAGGAAGAGTATTCattgaaaaattccaaaaaatctggtaaaattcat
aaaaatacacaaaataTTGGTTTTGAGGTAAATCTAGCtatacatagact
ttatccagtctagaaccaaaaatctgagggaaattttggtaaaaagaaat
ttgatgacatttttaaacccattcgacccttcagtttcaaaatgtaTATG
CTTAATTActaaaaaatgctcttaatcatgtgaACGCTATTGTAATTGCC
AGTTTTAGAATAAACATTTGATAGGTTCATTTACATCGTTTTTGTGAGCA
CTTTCTaaatgtaacttttttattcaactgaacataacttttgatctaat
caatcgaatttaataaaatgacacattatctttcttctttctcatGGAAA
AGaattggttcttttaaaattttggagttttgacaaaattaaacttaaag
agagaaatttttttgtggcgcacccggtatcaaTATGCCATGGCGGCTCG
AAgctctctgattttgaaaaatgattagtACTCTTCTGTTGATAAAAGTT
CATATTATTGTTAAGTTCAACAAAGAAAAGAACCTGTGATTTTGctgaga
aaaaggaaaaaccagTTTATTTTAGCTAGCTTTTTCCCACCTGCTGCTAT
CTCTGGTTATTTTGATAGCATAATTGATAACACCAAACAAGTATAACAGA
CTAATTGCCAGCTAAAACAAGATTAGCTTGTTGTGGATTTTATGTCCCCT
GGATGGCTAGTGAGGTTATGAATGAGAAGTAAAATAAGAATTAGTGCACA
CTTTAGAAGTTCAAGTTTTTATAATCAAGCAATTCCTTTGTGGGATCAGC
CTGTTAGCTATAGGAATGTACCTTGGATTGTAATATTATAATCAAAGAGC
AATGAATTNTATAATCAAGCAATTCCTTTGTGGGATCAGCCTGGTAGCTA
TAGGAATGTACCTTGGATTGTAATATTATAATCAAAGAGCAATGAATTAG
ATCccatttttccctttttttttgtagaaagaaGGAACAGAGAAGTTGAT
GGCAACCGTATCACGTGTTCGTGACGAAACAGAAGGCGAATTTGCAAAAA
TGTATAATCCTTTTGTGATCCTGCTCTCCATGTCAGCTATCACTATTAAT
TATCCCTTCATTTACACCGGTGTAAGGCTCTCTATTTTGCAGATTATCCa
gaaataaaattcaaagtTCTAGTTTTAAGCTTTGATAGCGGCCGTAGCAT
AAAGGTAGAACACCCCAGCAACGGTGTGCACGGTTGTGGGTTCATTCATC
CCCAggtgggtcataccaaagactatGGTACTTGATGGCATCATGTCAAG
TTGACAAGCCTAAACTCACTAGTTTCGCATGATTTTGTGACCAGTTTTTT
ACACCAAAACTGACTTAACTGCTTCTGAAAGTGACTCTAGACGCTTCATT
TTAGTAGTTCAACATGAATTAGTATCAATACCATCCAgttattatcatta
aaatgttttaaatattttaataatgataaaacatccaaaatcaGCGTTTT
CAGGGTTTTAGACCCTATTTGTCAGTTTTTGGTCTGGCAATTCctgaaaa
atgaatgaaatcaaaaagattttcatactattgttatTCAGGTAGAAATG
CATCTAAAAACTCTAGCACAGTAGGTTTTGAAGATAGAGTGCTATTTTAC
CCCTACCCCTACTtacatagtttctagaggggtcaagaccccccccctta
ggaaagAAGACCCCCCCTCAAGTGCTAACCtccccttaggaaattcattt
aaaatttcgaCCCCCCCTTAgaaatcagtataaatgaaatttcgcataat
tcaaggaagatcccCCTTATCTAAGAGACCCCCCTTTACGTAAGAAGACC
CCCTTAACTGGcaaccccccttaggaaagtcgTACTTTTAACACCCATTT
GCTTTcggttcatcaaaacccaatACCCCCTAAATGTGGGGGGGGGGGAG
AAACTATGACTTATGGGTTAACAGCTAAAGAAAAGGGAGCATTCGTGACG
CCATGTGACTTTAGTCACAAACTTACTTTACAAACTTACTTTACAACTTT
TTTGATTTTGAAGACTCATCTCTTTTTGGACCTACCCCGGTGGAGGTCCT
ATAAATTAATCGTTGTCTGTTTGTTCGTTCGTTCGTCCGTTCGTTATGGG
CTTTTCTCGAGATCAGCTCATTCAGTTTTTCTGATATTTTGCACAAAGAA
TCAAAATGGTAAACCTTTGAATGTGACGGAGCCCGATTTCCGAGGAAATT
TTTTTTGGGTCAATTTGGGCCAAAATATGCCCAAAAATGAGGTTTTTTGA
GATTTCCTGGAGTTTGAATCATTGAATGTTTCTGATTTCTTGCATAAAAA
CAGAGCACCATCATAGGGAAGAGATGATCGAATTTTGAGTTGCTAAAATT
GTTTTTATAAGAACTGGGCCAAATTCTTAATTTGTTTATAAGCAAATTGG
AAAAAAGTATTTTTACTGGCATGAAGAGCTTAAAAATTGTCAAATTCCGC
TGAAATACAGTGTACTTTTTGATTGGATGAATTTCTACTACAGGTCTACC
TTTCATTATTTTGAAATATTGTTTTTTTCAACTTTTTTATAAGCACATGT
TTGGAAATTTGGCCAAAATATGCCCAATAATGTCTGTTTCTTTTAAGGTT
TCATCATTATCATTCAAAAAATGAATTTCTAGCTATGAAAGAATCACTAT
TTACAAGTATAGATCAATATTCTTCTATTTTATAAATAAATGAATTACCT
TTTTACCTAAACAAACCTTATTATTTTTTATTTTGACCAGTTATGTCTTA
TGTGTTTCATTGTTTTAATGTTCATTGATTAGTTTTGATAACCAGCAGGT
AGGTCCATAAAAGTATCACTTGTCTTTACATTTGTGTTGCCTTGACACTA
CCTTGTTTAGACAACACGGCCTGGCCAGTTTCTACCTAAATCTACTTAAA
ATGACTGCATAATCAATGCCGTAAATCAATGTATACTACCTTGAATGAAT
AAATTTTAGAAGCAGATAATTTTTTTCAAAAAAGATTTAAGTTTCGCAGG
ACGAAAAGATTACTTTACCCTTAGTTTAAGATTTAACACTTTTCATTTCA
ATTTCCCAAATTAGCACACCGTCAATAATGAGCCATGGGAAGAAATCATA
TTGGGAAAAAGTAGTTGGTGGAAAGCTATCAGCAGATACACATGTTATGA
CGCATGGCAAGCAAGGGTGAATACTAGTTTTTATTTAAATTTAAAGAAGA
ACAACAATGTTTTAAAATTGAGCAAAAGCTTTTCGATTAAAAATCATCTT
CAGTGCTACAAATGATGTTAAAATTTGGAAATCAAAAAAAGTTACAATTT
ATGTGTTTAAAAGCAATTAAATGTAGTAAAAAACTGGATAAAAGAAACAT
CATAAAATACAAAAGGCAATGCATGTTAAGAGAATatgtaaaaagtaatt
aaaataattgaCTAAGTTACTCCATTTCGGAAAAGAATTAACCAGTTTGA
GTCAAGTCGGTCATTTAAAGACGGTCTCTTGAGGGCTATGATAGATGCCT
CTAAATTCTTTCGTAAACCAGTTTTCTCAGGGGCACTAAAGATAACCTTC
CAATGATGGTTTTGGTTAATCTGCTGATggatttgatggttctggtgaat
ctacGGATGgtttgatggttctggtgattcTGCTAGTGAAGATGATGGTT
CCAGTGAATATACTGGTGGAGTTAATGGTTCATTTAAATCTGCTGATgga
tttgatggttctggtgattcTGCTGATGGATTTAATGGTTCTGGTGATTc
tgctggtggagttgatggttctcgTGAATCTGCTGGTGGATTTGATGGTT
CTCGTGAATCTACTGGTggatttgatggttctggtgattctgctggtgga
tttgatggttctggtgaatctgccggtggatttgatgtttcttgTTCAAT
CTGCTGAGTGCTTGCTCTTTCAAATGACAATTACCTGCCATTTGCTgtgc
aaagaaatatttttttatcccTGCCCAAAAAAACTTCAACTCGTCAAAAg
cttttgtcaattttcatttCCGACTTGGTGTttgttatttacggccctat
tTGGCGCAGCCAAAATTGCGTAGTGGCATGAGAAAGGCACGAATCTAttg
agaatgaaaaaaatgGCCTCTAAGGTAAATATTTATGGTATTCACGATGC
AATATTTTATACGGACCAAAGTAACCTGGAACTAAttgcaaaataacaaa
agacttgTGGCAAAATTTGCCGAGTTCAGGGCTTactcgggtgcttccgt
ataaaggATGAAGTCATGAATATCATGGATTGGTTGCATGAAGTAGTTTG
ATGTTATTCCGTTTTTTATCCGACTACTTCATCCAATGATTTCCATCCAT
CTTCATCCATTCCGTTTCTGCAGACTACTTCATCCAATGATACAACCATC
AAACCATTTTTNATTCCGTTTCTGCAGACTACTTCATCCAATGATACAAC
CATCAAACCATTTTTTGAGAACCTAATTCATCTCGATAACATAATTCGAT
AAACAATTTCTGATACCACGACGAAGCAAAATCTCAAATAAAAGATACCA
CAAAAAAATCCTCTTCCCTTTTTTAGTATGTACCATTTTTCGTGAGGGTA
AATGTGTATTTTCCCTCCCAgagaacattttattttttgttacattgtAA
TAAATGGCGCCTGTTGAGGACGTGTTTTTGGCCGATGTGGTTAACCTAAA
TTTTCAAGATAATCGTTCTTCAGACACCCGACAATTGGAGTTCATGTTAC
GTTTTCAGCCGAAATGTCTTTTTTGTTTGAAGAAGCTAAGACCAAGAGCC
TCTCAAAGGTGcatcaactccaccagcagAATCACCAGAACGATCAACTC
CACCAGCAGATTCACTAAAACCATCAACCCCAGcagcatattcaccagaa
ccatcaaatccACCAGCAGATTCTtcagaaccatcaactcaacCAGCAGA
TTCAaaagaaccatcaactccactagCAGATTCAAAAGAACCATCAACCC
CGGCAGCAGATTCGCGAGAACCATCAACCCCGGCAGcagattcaccaaaa
ccattaACTCCAGCAGCATATTTAGCAAAACCTGCCAAAACCATTAACTC
CACCAGCAGATTCAcgagaaccatcaactccaccagcagATTTACCAAAA
CCTATAATTCACCAGTGCTTTTTTCtggggtcacatcttggggcagCTTT
TTGGGGTCACATCTTGGGACAGCTTTTtggggtcacatcttggggcagCT
TTTCGGGTCATATCTTGGGGCAGCTTTTCGGGTCACATCTTAAGGCAGGT
TTCACATCTTGGGGCAACCAGTTCACATCTTGGGGCAGGTTTCACGTCTT
AGGGCAGGGGTGACATTTTTGGGGCTGTACAGGAACAGTCGGGAAAATTT
CTCAATAAGTTGAATATTCATTAGGGAAAACTTACTTTTGTGAAAAGAAA
ATGTTTCGAAAACTTTGTTGCTTTCTCTGGACTAAattaattaaaggttt
tatttttacaaaagtgttcccatttcatatcagaatATCAGacgacacat
gtttcatatcaggccaTATAGAAATTTGTTATATCTGTAGTTATATTGTG
CGGATATATTAAGCAAAAAGTGTCTcacttttcctctttctgaccatcTT
GCTCCACaaccgtgtcaattcaatatcgaaaagcttgtaaattaaatttg
atgagtaagcaaacgatatcactcttatttttcTCTGGCCTCAATGCTGT
TATAATTATGCTTATTAccacttttcttcttttcttctctataggatgga
gCTAATCATAGGCCTACTTGTGGCTATGTGTACAACGAAAAAAAGAAGCG
CATTCCAAACAGTCAGGTATTTCATTTCCAGGAAAACTTAAACCATAGTC
CGCCGTGTGAAAAACCTTTGTTCCTTTCGATTGTTTCCTACTTAAACTTG
CGTCGAGAcattagtttttttgttttgctccCGATAATTTTTTGGGATAT
TTTTCTATCTATCTCTTGATGTCCGACCTCaaaagttgtttattttttgt
ttacctGCGAAACAAGATACTCGtaatttatgtttattttttatttacta
caaaatgattttctcggcctttgaaaaaaaattaaaactgcTTTCCCCAA
AGTAGGGTGTATATGAtgaaatgactttttttctggaaatgtaATTTGGA
CAACTTTTTCTGGTAATTTAATCTATTTGAAgactttctgcaaaaaaatt
aattcaaaatcttcaaaattgaccGTTTGCCCCAGGGTTTTGTAAAATTG
ATATTTCTGAAAATTTGCGAGAAAcagggtttttgcctgaaaaaaaatcc
taaaaccaGCTGTGTTGGTGCTAAAGCCCTGAAATTGGGCCAAAAATGTt
acttggaaaaaagtaggattagaatgtaacaatgatATAGCTATATCATA
cattaaaattattaaaagtaGGTTTATAGgccaaaaatgaccgaaaacgc
aaaaaaatggggttttgcctgaaaaaatcctaaaacctgctgtgttGGTA
CTACAAGCCTCAAATTGGGCCCATAATGTTCCTTGagaaaaagtaggatt
agaatataacaataatatagctctatcatatataaaaattacaaaataat
agGTTTTTAGGTCAAAATTGACCGAAAAAGGCATATTGAATCAATTTCTG
ACACtcttaagtgctttaaagtaatAAAATAGATGTTTCATTATGTaatt
aaataaatttatttgggcaatcAGCTTAATAATAAATATGTAACTTAGAA
GCTTCATTTTGtaataatatttcattttatttaatatttaaataaaataa
aatattattacaaaaTGAAGCTTCTAAGTTACATATTTATTATGTTTCAT
TATATATAATTTGGTACAATAAGCTATCCTAATGgcaaaattgagcaaaa
atttgggtttttaagggattttttataaaaaaaatacccccaaaaTAGCG
GAAAATAGCGATTTTTAAGCTTTCATAACTTTTAAAGGCTGAAATACAAG
ACTTTGAAACTTGGCATAACTGAACATTGGAactgaaagaactaaaaaac
ttagcaaaaagaaaaaaaaaattcataaattttccACTAAATCAACATTT
TGTCATCTCAAAAATTATAAGTCTGTTTGTGCTGAACTTGCTTATTTCTA
AGCAAGGCTTGATGGGCACTACAGAGTTTCTATGTACGGTTACATTGTCA
GAGTTCGAAGGCCATTTCCAAAGACTTTTCATTTGGTCATTTACACTAAC
AGGTGTCATGAAATTGCAGTTCACATCTTCTGTACCAANNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATCTAAT
CACTATAgagagaatcaaagatgaagagcaaatattgccgtattaatgtc
tagcagattgTATCAGTATACATGCTTACTATTGACGAATTCCCCAAGAA
ACCTCcaagtttatttttttgaaatgtgtttctttcaaaagaaatcctcT
ACATCattccaaatgtataacagtaattgcactaaactattaattatacT
TTAATGGAATCGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGATG
ATATTTTTGAGATATGCTTTCCACGACGTGAGTAAAAGTATCAACTTTaa
acttaatccaagatcttagATTTTCGTCATGCTTACTTTTCACAGCGTTG
gatgcgcgctgaatagaattgaTATTCGCTGTCACAGGTCGGAATATGAT
TTCGACATGTGATTTTCACGGTAGTCATGTTATGATTGAGGTGATGTTTT
GGTGTCAGTATTCCCTCTACCGGTAAGTAGGTACCTCCAACATTGAACAt
attatctgttttttttttctcacgttCGCTAATTTCGTTGTCTGGTCATT
TATTTTCAACAATTCTTTCTTAATGATATAAAGATCTAGGTTATTTTTTA
ATGACCTGCACGAGTTCAACACAATGTTTgtcgaattgaaaaaaaatgtg
tcaTCATGGTAATCTCTTACAAGaatatgatttatttatttgttacgATA
TGCACTTGTATTAATAGACCATGGCTGCATTCGAATGCGACCCGAAAGCT
TGGCTATCAACCCAGAGGTGGAGGaaggtgccactctttctccctggact
ACTCCACTTACCCTTTATCTTTTTCTCTAATACTGAGCATTAAGCAGTGA
GTATCAAGTACAAATGGCCCGACCAGGGATTGAACCTACGACCTCGCGAC
CTCCCACCTTTCTTATAACGgactttttttgctttaatgCTTAGTTCGTA
AAGTGTTGTTTTACCTTGCTCCTCATTACTAAGTCTTAGCGATTGTGGCG
GTCAAAGCTGTTTCGAATGACGAATGACGATGCGCGCTCTCGAACTAAGT
TAAGTGAACAAAATAGGAGAAATATAggtaaaaatagcatttttaccACC
TGAAACGTTAAAAAGTGCCAATAATGACAACGTAANNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNTCTTTTGAGTATATTTACCAAGTTTCA
AGACATTCCCATGGCTAAGATAAAAAGATATGGACTGATGTTACTGACAT
AAAACGGCTTCTCAATAGTAATTTCTTACCCAAGCTCTTTTAAGACCCCC
TAATTCAAAAGTCCCCTTATAACGCTATTTTACTCTTCATTCCATAAACT
GGATGTTGAGCAGCACGAAAATCGTATATAAAGTTACTACCCCTCTAGGT
TGGCAGCACTCAGCACCCAGCACTCAGGAGCTGGTCTAAGAACACTTGGC
TTGAAGCTGTAAGGAGATTTGCTGCCATTGAGAATAGGGAATACTActac
ataattcaaaaataattggaCAGTAGGGTTTTTTCTGATACTCATAACTC
TTTCTGTGTTTATTTCCATGACTTCTTGTAAACAAATTTTTTGTTCgtct
tgaaattatctttcttttgatatataatacttgtatatttgaacaacttt
ttttcGGACATATTTTCCGGACATGTCCGGTTTTAAACTGTCCGGAAAAG
TGGTCTCCCCTGTCCGGATTgatggggctttttttttggtaactcagtat
accctaaagaacatctgtgccaattttcagcttgatggcaattttgtccg
ggttgtggtgaaatttcaactaattctacctgactattcTAACTTATATA
TTGAAGAAAATGATACATAAACTTTGAAATCTAGAGCATATTGAAATGAT
AACCTAAGTGCTTGTTTCTCCTCTGATTGGCAAATCAATTCATTTATCCT
GAAAAACACAAAGGTTCATGGAATAGGTAGATTTAAGATTTACAGttact
tcttttcctctagaatTTTCTTGTTCATCGTGTTGAGTAATACCATCCAT
CAATTGATCTTGCTCTCCTTCCACCTCTGCTTCATTGTCAGTTGTGCTTG
CATTATTATTGATTGCATTCTCAAGATCCATCATGTCAGCTAAAACTCTA
CATTCCAGTTGAGATGTGATTAGAGTCGTCAAATTCTTCACCTTCTGCTC
AACTGTTAAGCCACATTGTTTAAACAAGGGACACGCCGTCTTCACTTTAT
AAAAGGTGAACTTTCTGAACCTGATCTCCAAATCCAATGCTTTTTGAAGC
CCTTTTTCTGTACCATTCCAGTCTTGAACCAGGGTGTCAAGCTCTTCAAT
TGTAGTGATTTGCCCTTGGTGGGAATTTTTGCAAGCAGATACACATCTGA
TAACTTTGTTGCTGGTTGCTAGCTTGGCTGCATCTTCTTCATCAACATTG
CTGGCTATCagcatagtgtgcacccccccccaGAATAGTGGGGGGGTTTT
GCTGatttgggtcgaaaattttcaggtgggatttggggttttccaggttt
taggtgggagaaacaagttaaggtgggagttaatttctttaggNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNtagctgggatctgggagtctgggctgaa
ggtgggaattttaggataaggtgggacctgaattttcaggtgggacctgg
aacccccttgcacactatgtatcaattctttttgtttttgatccaATAGC
AGTTCCAATAGCTTTCtttaattttgccaaatttcaaagtctTGAATTGA
GCCTTTAAagttatgaaagctcaaaaatCGTTATTTTGGgagtatttttg
ataaaaaatcccttaaaaacccaaatttttgcttaattttgcCATTAGGA
TAGCTTATTGTACTAAATTATATATAATGAAACATCTATTTTATTACTTT
AAATCACTTAAAGAGTTTCAGAAATTGATTCAATATGCTTTAAAGCACTG
AAAATCCccattttgagtaattttcgcCTTTTTCGGTCAATTTAAAAACC
TATTATTGTGTAATTTTTATATATGATAGAGCTATATTATTGTTatattc
taatcctactttttccAAAGGAACATTATGGGCCCAATTTGAGGGCTGTA
GTACCaacacagcaggttttaggattttttctcaGGCAAAACCCgatttt
ttcgcgtttttggtcatttttggcctaaaacctacatttttgtaattttt
atatatgatagagctatatcattgttacattctaatcctacttttttcca
aggaacattttggACCCAATTTCAGAGCTTtagcaccaacacagcaggat
ttaggatttttttcagccaaaaccccattttttcgcgttttcggtcattt
ttggcctaaaaacctacttttaataattttcatgtatgatagagctatat
cattgttacattctaatcctacttttttccaaggaacattttaggcccaa
tttcagggctgtagcaccaacacagctggctttaggattttttttcaggc
aaaaaccctgttttttgcaaatttttgaaaatatcgatTTTACAAAACCC
TGGGCAAACggtcaattttgaagattttgaattaatttttccaCGGAAAG
TCTTAGAATAGATTAAATTACCAGAAAGATTTGTCCAAAGTGCAATTCTG
AAAAAAGTCATTTCATCATATACACCCTACCCAAAGTTTTTTTCTTGGCT
GCTGCAGCATGTGGAGTCGATGTCTTCCTCTTTCCCATGACTTCGAAGGG
TTCAAATGAAACAAGCGCTAGACTTCCCACTGCTTTCTCTACACTCTAAA
GGCGTTTCATACCGAAAGGTGTTCACATGGATGGGCTAACATGGTCTAAA
TGCCGGGAtttaaataaattcatcattaaCAATTATAAAACGATCCCTCC
AGactaattgcccccgcaggagcgtagcgacgaggaggcactcatagctt
cacgcgtAGATATTGGACTGGCATCTCGAATTCTTGCGACTTTGTTGTCG
CACTCTTCTGTTCGGTACTTGACCTCTTCCGTAATTACTCGGTTTTTTTT
CCAGGACGgagtttgatcgccatcaaacatttcattcaacatttgcggcg
agatcaaagaagctctcccattgaattgtgtaatttttcgtgttggattg
gtttggtggtacttttttctttatttttttgaattttcatttttttcaaa
gtcatGCCgaatgaaatgttggatcggtttgccccggccttgatttttgc
ttcatccaacgcaagtttttccatcaaacatttcatccaacattgaaaaa
tcatgttggatgaaatgttggactggtttgccctggccctaacagtgtac
atgtttttttataagtatatGTTTTTGGGGAAACAAGCTCAGTTATGCTT
AGAgatattttagatattttttccgaaaaatagGATAGGAAAAATATCta
ttagaaaaacaaaatttcactaACACACCTCAAAAGCAAGATCAGTAATA
TGCTTGTAACATGCTTATTTGATCTCGCCgaaatgtttgatggaaaaact
tgcgttgGATGAAGCAAAAACAAGGCcggggcaaaccgatccaacatttc
atccgacatgactttgaaaaaaatgaaaattcaaaaaaataaagaaaaaa
gtaccaccaaaccaatccaacacgaaaaattacacaattcaatgagagag
cttctttgatctcgccgcaaatgtagacaaattcaggtctcggtatgctt
ataaatgttaggcttataaaaaacatgtatttcaccataacacgaattac
aatacgCCATTTCGGAGTTCGCGACGCCATTTTGTAGGCGGAGCAAATTT
TGCGTGATATGCGGGGCAAAGTCCAGACGGGGATTCCTTCGATACAAAAT
GTCAATTAAATGTAAacataacaaaaacaaaataataaaataattcaaCT
CTGTGGTGGAATCAAGATGGGGAAAAATGATCATTGTTGTGTCTCAGGCT
GCAAGAACGATAAAAGATGCATGAAtaacttgtgcaaatcaaaacaaaca
aaaaggcagactggttatgatgatgagctgattcattgactaaATACCGT
AAATCCTGGGATAAGTTTccgggcgcttatttaattttccAGGCTCTAat
gggggcgcttattcaagcagGGCgattattcgagcggggcgcttattttt
ttatttcagaaattcgcatatcaacaaattcggaatctgcttaaaccTAT
CTGtttcaaagggttgatttttcaaaaaaggatgaataaaagaaagattg
gaaaaatccaattgacaatttctatcattttattcttaatgactttcttt
ctttttaagacacaagtatctactcaatatcttattcaatcaataacaat
attcgAATAAGTGCCCCTCCCAATGCTTAATAACATGACTTTGCAACatt
gatttcattttctttattttcagggCTTTTGCTGTATCTGTTCATTAGCA
GATAAACTGGACTATACGTTATCACAAGCTAGGCATCGCCAAAGGGGAGG
TGTGGCTTGCCAGTTTTTAACTAATAACCCTCAATCCTCTGCCCATTGTA
TGCGTCACGATGATTTGTGGTATGaataatttgatttattttactAACAT
TTTCCTCATAAAATTCTTggtccaatgaggggtcaatgaCCTCCAAACTC
CCTTTCGAACTCGAGATATcgtattttaaagtttttccaaaatctatGAC
GTCagtgggtccctttacccctttCAATAGTCGATtcacaaattttggat
ttttgtgtattttttccACGGGAAAGCGGGTTTTAGTTTTTGCGAAAGAT
TGATAATACAACGAGCTCTTCTCCAAAAAACCTGAATCTGAATTTATTTT
ACCGTTTTGATTTCGATGAGCGCGGCCTTGACGATCGGGGATGTCGTCAA
ACGCTGGGTTATAGcgtgataaaatattttgtaagATATTGTACTGCCGG
CTATTGTGACGGCCTATCAAACGAATAAGACCCAGTGGGTGAGTGAGACC
GGACTACAAAAGGGACGAGCTTAGAACCTAGGGGGGCAGAACCTAATCTT
ATCTACAGACAGTGATGTGAGACTATGTAGTTACAATACATTTAGATTAT
TTAACAATAACAACGCTCTGCAATACTAACTATAAATATAAGGATACTTT
TACAACCCTGATGGTCCGCTGCCGATCACTGCCGAAATAACACTAAAGTT
CAAGAGGGCTGGACAGCAATTGTTAAGTTGCTGTTCAGTGGAGCGTGGAA
GGCGCTATTGGGCGTTAAGAGGGCGCTTGGTGGTTGCTATAGAGGTGCGG
CCGAAGGAACTTTATCTGTCCAAATGTGTGTGAATCTGATACCTGGAACG
TAAAAATGCTCGATTCCGCTTCATTCTCGTAGAATTTCACAACTAAACAT
TAACTAGtatttttatgttatttttttcaggtatTCTATCCACTATTTTA
GACCATCTTATAAAGATTTCACAATTCACATAAGAGCTAAAGATCAAGAA
ACAACAGTCGAAAATAATAAGACTGTAGTAAAGTGGGTCAATGGAGGTGA
AATCGTTTTAAGTCCCAGAAGAAAGGCCGGTGTTGGAAAAAATGGTAGGG
TAAGCATCCATATAAAGAAGGATTCTTCCTCAGTCAAATTACAAATGAAG
ATTTTCAGTCTATTTTAGGTGTAATTTGTGGACTGTTCTGTAGAATATCA
ACCTTCAGGGTGTCTATTATATCATATATATTTTCTGGTTGAAATCTTGA
GAGCCTTGATAATAATTTTGTTgactgaaaaatacaaattcttGTCTACT
TGCTGGACAGagataatgaataagaaaaAACCCTGGCTAGAATCAATCAT
TAGATTTTTTTGATAACTATTTTCTATTTAGATCATTGCTCATTATGTCG
GTACTTTTCAAACAAATACAGCGCTCCCAgttcttcaaagtttttatCTA
CTTGTACCATTTTTGTCGAAGAAGGCCACCACCGGTCCGACTGACCATGA
TCAAATGAAGgtacaaaatatttctttcaccAATCAAAAAAGTTCTCTCT
TGCTGCAACCAATGCCCTTACTAAAATGTTTTCCCTTAATGTTGTTAGGC
TTACTACTTACATGTATCCCGAATgtgaaaagtttaaaagtcaattataa
aaaaactcTATTAAATAGTCTAGTTGAGTCTAGTAGAGGAACTTTCAGGG
TTATAAAAGGCTCAGTAAgatttaaaactttattttttcagtttAGCTTA
CTTCTTTTGGAGATATTGAGCCTAACCCAGGGCCGAGAGAGAAAGACAAC
ATCTTAAATGTGTCTAGCCATCTACAAATCCTGCCTCATCTTGGCCATGG
TGGTATCATAAATTATCGTCCAGGAAACTCCACCTTCGTATTGAAGCTTG
AATCCATGCAATATTACGCCTGTTTGACTATCACAGGCTGCTTGTATGGA
ACTTCTCAGGAAAGAATATATTCTGAACTTGGCTCTGCGAGCCTTACCGT
cagttgttttgaaaagaatgatTTACAATCATGGCCGGaatatattgaca
ttttagtgcattttaacgttcttcagaatttaaagttcgggcgagaataa
ttattttagcacttccactttctttcattgaataattcgattttagaggg
gttcggtggcttctatattccaagccttattcgagaaaattttaaatcct
gagatcctaggGTCttaactctactttccaactgtagtttaaggcgctta
aaatcatttgtggtgtttaaaatttcgccgggaaatcccctttgtctaaa
ataaaagtaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034474XLOC_034474Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054717-exon-scaffold_244-1491911889:127914..128270TCONS_00054717-exon-scaffold_244-1491911889:127914..128270Clytia hemisphaericaexon
TCONS_00054717-exon-scaffold_244-1510915933:127914..128270TCONS_00054717-exon-scaffold_244-1510915933:127914..128270Clytia hemisphaericaexon
TCONS_00054717-exon-scaffold_244-1575043694:127914..128270TCONS_00054717-exon-scaffold_244-1575043694:127914..128270Clytia hemisphaericaexon
TCONS_00054717-exon-scaffold_244-1491911889:129691..129834TCONS_00054717-exon-scaffold_244-1491911889:129691..129834Clytia hemisphaericaexon
TCONS_00054717-exon-scaffold_244-1510915933:129691..129834TCONS_00054717-exon-scaffold_244-1510915933:129691..129834Clytia hemisphaericaexon
TCONS_00054717-exon-scaffold_244-1575043694:129691..129834TCONS_00054717-exon-scaffold_244-1575043694:129691..129834Clytia hemisphaericaexon
TCONS_00054717-exon-scaffold_244-1491911889:134558..134629TCONS_00054717-exon-scaffold_244-1491911889:134558..134629Clytia hemisphaericaexon
TCONS_00054717-exon-scaffold_244-1510915933:134558..134629TCONS_00054717-exon-scaffold_244-1510915933:134558..134629Clytia hemisphaericaexon
TCONS_00054717-exon-scaffold_244-1575043694:134558..134629TCONS_00054717-exon-scaffold_244-1575043694:134558..134629Clytia hemisphaericaexon
TCONS_00054717-exon-scaffold_244-1491911889:146687..146832TCONS_00054717-exon-scaffold_244-1491911889:146687..146832Clytia hemisphaericaexon
TCONS_00054717-exon-scaffold_244-1510915933:146687..146832TCONS_00054717-exon-scaffold_244-1510915933:146687..146832Clytia hemisphaericaexon
TCONS_00054717-exon-scaffold_244-1575043694:146687..146832TCONS_00054717-exon-scaffold_244-1575043694:146687..146832Clytia hemisphaericaexon
TCONS_00054717-exon-scaffold_244-1491911889:147694..147862TCONS_00054717-exon-scaffold_244-1491911889:147694..147862Clytia hemisphaericaexon
TCONS_00054717-exon-scaffold_244-1510915933:147694..147862TCONS_00054717-exon-scaffold_244-1510915933:147694..147862Clytia hemisphaericaexon
TCONS_00054717-exon-scaffold_244-1575043694:147694..147862TCONS_00054717-exon-scaffold_244-1575043694:147694..147862Clytia hemisphaericaexon
TCONS_00054717-exon-scaffold_244-1491911889:148145..148273TCONS_00054717-exon-scaffold_244-1491911889:148145..148273Clytia hemisphaericaexon
TCONS_00054717-exon-scaffold_244-1510915933:148145..148273TCONS_00054717-exon-scaffold_244-1510915933:148145..148273Clytia hemisphaericaexon
TCONS_00054717-exon-scaffold_244-1575043694:148145..148273TCONS_00054717-exon-scaffold_244-1575043694:148145..148273Clytia hemisphaericaexon
TCONS_00054717-exon-scaffold_244-1491911889:148505..149074TCONS_00054717-exon-scaffold_244-1491911889:148505..149074Clytia hemisphaericaexon
TCONS_00054717-exon-scaffold_244-1510915933:148505..149074TCONS_00054717-exon-scaffold_244-1510915933:148505..149074Clytia hemisphaericaexon
TCONS_00054717-exon-scaffold_244-1575043694:148505..149074TCONS_00054717-exon-scaffold_244-1575043694:148505..149074Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_244supercontigscaffold_244:127914..149074 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.300696	0.47252	0.587299	0.588461	0.435938	0	0	0	0	0.111442	0	0	0	1.38367e-06	1.9943e-10	0.15742	0.193556	0	0.378141	0	0.176885	0	0.181332	0.0426097	0.0482323	0.0870586	0.430465	2.30822e-08	0.141384	0.000199373
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054717 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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