TCONS_00054754 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054754
Unique NameTCONS_00054754
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2812

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054754 ID=TCONS_00054754|Name=TCONS_00054754|organism=Clytia hemisphaerica|type=transcript|length=2812bp
AAAGGGTGTAGTGGGCGGGTAAAGGTGGTTTTAGAATACTTAAGACTGAG
TTGATTACATCTGTCAATGAAATTAAAAGGTGTCAAGTTGTAATGCGTTT
GAAATTCTTTATGACACCTCCGAACAAAAGAATAAAGAGCCCTCCTTATC
ACCCACCGTATTATTTTTGACaactattttttaattttagcattttagga
aaattttcttttctctgTAACACGTAAAGGAGACTGTGTGTATGCGACAT
AAACAGTTCATGCAGTTTAATGCACAGTAGGGGAGACAGTATGCACTTAG
CGGGTTTCCATGTTTTACATATTGATTATCAGCTGTTTTCTGATGTCCTT
GTATCCTCTGGTATTGAAACATTTTGTcgaatattcaaattttaattctc
TATCTTTTCTCTCTACAGAATAACtaataaaaaattgagaaatataAAGA
AAGATAAGAAATATGATTGAGAAGACGGTTTGTTCATATGGTTACATACC
AGAAATGATGCGCCCCCATAATGGCGAATGTAGTGCGTTTCCAGAGGAAC
AGAGATGTAAACAAAACGCCAAAAAGAACGCGAGGCGTCGTGCTGCAGAA
TCACGAAAAGCGATCCGTTGCAGTGATGGAGAATCGGACACCAGTGATGG
CTTCACTGTCAATTCCGGTGGCTCAGGAAGGTCCGGTGATTGGGGACCAC
CGAGAATGCGACAAAAACCAAAGTATTCCCGAAAACGTCACGAGCACCGA
GCTTCATTCACCGATAGTGGAATTTCGTTAACGAAAACCGATTCTGGAGA
CTTATCAGAATTTTCGTATGGAGaacgATATTTCATCAACCGGCCAACAG
ACCCTTACAGTGATAGTTCACATGAAAGACAGTCGCGCATTCTAAAACAA
CAAGTGGTGGTCACAAGAACACAGCGATCGCAATCGAAAATTGAGTCCAA
AACTGACGGATCTTCAGTTTACCAAAAAGAGATCACTTCGCTTAAACGAT
CTAGCTCTTGCTCTGCTTTACCATCCAACATCAAACAAATCAACAGACAA
GACTCATCCCAATCGTCACGCTCAGCGGTCGCACCTCAACAACAGCGTAT
ATCAAAACCATCCGCAAATATTGAAGAGAAAGAAAACGCCATTCTGGAGC
AATGTTACCGCAATGAAGGTTTATCTCCAGAATGTGCTGAAATGGGATGC
ATGTATGATTGCCATCATCAACATTCAACTTCACGATTCCCTCTACCAGA
TCATTTAAACTATCCACTCAACAAATATTACCAATCTGAAACCAATCTTC
ATCGCATTCAACCACTCAAAAAGATTCGATCAAGCTTGCGTAAATTGCGG
AACAAAACCAACAATATTCATCTCTCGACACCAGATCGTTATGACAATTA
CTCCCTCTCAGACAATTATTCCATTACACCGACATTGGAATCTTTAGATA
GTAGTTATTTGAACTcattaaatgactttgaaagCAGTGAAGCCATTATG
GCTCGCTTAGCTAAAAATCCAAACTCTAAAAAAGCATGGgttaagaaaat
ctttaaatgGAATATTGGTAAATCTTACAAcatcaagaataaaaaatcac
cGAAGAAAGATGTCAAGGACAACTCTTCAGAAGTTCAGGAAGAGCCTTCA
TTGAAAAAACGCTCTCACTCCACACGCTCCATTCCAGAGGCTTTAATCAA
CTTCATTTCAAAAACTCAAGATAAATATTCTGCAACAACAACTGCAACCC
ATGAATTCGAATTTATGGTACCGACAACGTTACAACGAGCCAATAGTATG
CCATCTATTGCAACCAATCGTACTCAAACTCCCAAAACACGTGATACTGA
CGTCATCTTTTTTAACGAGGACGGTCCAAAATCTCAACAAAATCAACATA
AAACTCCATCAAAATTCTTTTCCAATAACAACCCTCAttacgaagaagaa
gaagagtttGATTATTACCCTCATGAAAACAACAACCACCCTGTTAACCA
CGCCCCACACCATTTCAAGCAGCCTTGCTACACTTCATGCCAAGACATCC
GAATGGCGCCCCCGCCTCAACCAACGCCCGGACATTGTCATTGCTGTCAG
CATGTTCAGCATGGAGCTTACATGCCACCACAGCAATATGTTCAATATAT
GCACCCTGCTCCAGTTCAATACGGCTATTATATCCCCAATGGAGGTCACC
AACAGCCTCATTATCCAGTCGCAGCCGATTATGAAGAAATGGTTCAACCA
CAACCGATTGCGTACTACCAGACATCCGATAATTCCGATCTCAAACCCGG
GCAACGTAATCCCCCGATTGTCGCCCCGTTAGATATGAAAGTTTCGGTTG
AACGACGTGCCGAGCGTAGAAAGATATGTGATATGGTTTTCGATACCTTT
GTTTGAACTAAAGTACTTTTTTTGATGATTCAAGGCTGGACCTTGATAAA
ATGAACTTCATGaaagattcaaaaaaagaaatatagtatgaaaagacttt
taaaacattttattttgtacATATATGATATAGGTTTGTCCACTTAGAAG
ATTTATTATTGTAAATAAATTCTTGTCAACGTTAGTTTTTACTTCAATTT
TTGTGAAGATTTTTGTTCTCTTGCGGAAAAGCTTCTCTCTGggctttctt
cttttttgctcaaaaattaGTTGGTTGTAATTATCCCAATTTAAATAGTT
AGCCAACATCTTTGACTTATAAAAGTGGATACTTTTTTAGTTGTTGTCCA
ttgtaaaattaatttttatttttatttcgaaaaacacgaaagaaaaatat
aagattcatgaa
Run BLAST on NCBI

protein sequence of TCONS_00054754-protein

>TCONS_00054754-protein ID=TCONS_00054754-protein|Name=TCONS_00054754-protein|organism=Clytia hemisphaerica|type=polypeptide|length=647bp
MIEKTVCSYGYIPEMMRPHNGECSAFPEEQRCKQNAKKNARRRAAESRKA
IRCSDGESDTSDGFTVNSGGSGRSGDWGPPRMRQKPKYSRKRHEHRASFT
DSGISLTKTDSGDLSEFSYGERYFINRPTDPYSDSSHERQSRILKQQVVV
TRTQRSQSKIESKTDGSSVYQKEITSLKRSSSCSALPSNIKQINRQDSSQ
SSRSAVAPQQQRISKPSANIEEKENAILEQCYRNEGLSPECAEMGCMYDC
HHQHSTSRFPLPDHLNYPLNKYYQSETNLHRIQPLKKIRSSLRKLRNKTN
NIHLSTPDRYDNYSLSDNYSITPTLESLDSSYLNSLNDFESSEAIMARLA
KNPNSKKAWVKKIFKWNIGKSYNIKNKKSPKKDVKDNSSEVQEEPSLKKR
SHSTRSIPEALINFISKTQDKYSATTTATHEFEFMVPTTLQRANSMPSIA
TNRTQTPKTRDTDVIFFNEDGPKSQQNQHKTPSKFFSNNNPHYEEEEEFD
YYPHENNNHPVNHAPHHFKQPCYTSCQDIRMAPPPQPTPGHCHCCQHVQH
GAYMPPQQYVQYMHPAPVQYGYYIPNGGHQQPHYPVAADYEEMVQPQPIA
YYQTSDNSDLKPGQRNPPIVAPLDMKVSVERRAERRKICDMVFDTFV
Run BLAST on NCBI

transcript from alignment at scaffold_245:76077..79098+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054754 ID=TCONS_00054754|Name=TCONS_00054754|organism=Clytia hemisphaerica|type=transcript|length=3022bp|location=Sequence derived from alignment at scaffold_245:76077..79098+ (Clytia hemisphaerica)
AAAGGGTGTAGTGGGCGGGTAAAGGTGGTTTTAGAATACTTAAGACTGAG TTGATTACATCTGTCAATGAAATTAAAAGGTGTCAAGTTGTAATGCGTTT GAAATTCTTTATGACACCTCCGAACAAAAGAATAAAGAGCCCTCCTTATC ACCCACCGTATTATTTTTGACaactattttttaattttagcattttagga aaattttcttttctctgTAACACGTAAAGGAGACTGTGTGTATGCGACAT AAACAGTTCATGCAGTTTAATGCACAGTAGGGGAGACAGTATGCACTTAG CGGGTTTCCATGTTTTACATATTGATTATCAGCTGTTTTCTGATGTCCTT GTATCCTCTGGTATTGAAACATTTTGTcgaatattcaaattttaattctc TATCTTTTCTCTCTACAGAATAACtaataaaaaattgagaaatataAAGA AAGATAAGAAATATGATTGAGAAGACGGTTTGTTCATATGGTTACATACC AGAAATGATGCGCCCCCATAATGGCGAATGTAGTGCGTTTCCAGAGGAAC AGAGATGTAAACAAAACGCCAAAAAGAACGCGAGGCGTCGTGCTGCAGAA TCACGAAAAGCGATCCGTTGCAGTGATGGAGAATCGGACACCAGTGATGG CTTCACTGTCAATTCCGGTGGCTCAGGAAGGTCCGGTGATTGGGGACCAC CGAGAATGCGACAAAAACCAAAGTATTCCCGAAAACGTCACGAGCACCGA GCTTCATTCACCGATAGTGGAATTTCGTTAACGAAAACCGATTCTGGAGA CTTATCAGAATTTTCGTATGGAGGTAAGATGATTTAATAATTCatcattt ttatgaaatctTTTTGGTCTGAATGTATAAACGAGAAGCCTGTATTATTC ATCCACCCCTTGATTCAtattcaaatctaaataaattattccgttttttt ttcagaacgATATTTCATCAACCGGCCAACAGACCCTTACAGTGATAGTT CACATGAAAGACAGTCGCGCATTCTAAAACAACAAGTGGTGGTCACAAGA ACACAGCGATCGCAATCGAAAATTGAGTCCAAAACTGACGGATCTTCAGT TTACCAAAAAGAGATCACTTCGCTTAAACGATCTAGCTCTTGCTCTGCTT TACCATCCAACATCAAACAAATCAACAGACAAGACTCATCCCAATCGTCA CGCTCAGCGGTTGCACCTCNTTCTGCTTTACCCTCCAACATCAAACAAAT CAACAGACAAGACTCATCCCAATCGTCACGCTCAGCGGTCGCACCTCAAC AACAGCGTATATCAAAACCATCCGCAAATATTGAAGAGAAAGAAAACGCC ATTCTGGAGCAATGTTACCGCAATGAAGGTTTATCTCCAGAATGTGCTGA AATGGGATGCATGTATGATTGCCATCATCAACATTCAACTTCACGATTCC CTCTACCAGATCATTTAAACTATCCACTCAACAAATATTACCAATCTGAA ACCAATCTTCATCGCATTCAACCACTCAAAAAGATTCGATCAAGCTTGCG TAAATTGCGGAACAAAACCAACAATATTCATCTCTCGACACCAGATCGTT ATGACAATTACTCCCTCTCAGACAATTATTCCATTACACCGACATTGGAA TCTTTAGATAGTAGTTATTTGAACTcattaaatgactttgaaagCAGTGA AGCCATTATGGCTCGCTTAGCTAAAAATCCAAACTCTAAAAAAGCATGGg ttaagaaaatctttaaatgGAATATTGGTAAATCTTACAAcatcaagaat aaaaaatcaccGAAGAAAGATGTCAAGGACAACTCTTCAGAAGTTCAGGA AGAGCCTTCATTGAAAAAACGCTCTCACTCCACACGCTCCATTCCAGAGG CTTTAATCAACTTCATTTCAAAAACTCAAGATAAATATTCTGCAACAACA ACTGCAACCCATGAATTCGAATTTATGGTACCGACAACGTTACAACGAGC CAATAGTATGCCATCTATTGCAACCAATCGTACTCAAACTCCCAAAACAC GTGATACTGACGTCATCTTTTTTAACGAGGACGGTCCAAAATCTCAACAA AATCAACATAAAACTCCATCAAAATTCTTTTCCAATAACAACCCTCAtta cgaagaagaagaagagtttGATTATTACCCTCATGAAAACAACAACCACC CTGTTAACCACGCCCCACACCATTTCAAGCAGCCTTGCTACACTTCATGC CAAGACATCCGAATGGCGCCCCCGCCTCAACCAACGCCCGGACATTGTCA TTGCTGTCAGCATGTTCAGCATGGAGCTTACATGCCACCACAGCAATATG TTCAATATATGCACCCTGCTCCAGTTCAATACGGCTATTATATCCCCAAT GGAGGTCACCAACAGCCTCATTATCCAGTCGCAGCCGATTATGAAGAAAT GGTTCAACCACAACCGATTGCGTACTACCAGACATCCGATAATTCCGATC TCAAACCCGGGCAACGTAATCCCCCGATTGTCGCCCCGTTAGATATGAAA GTTTCGGTTGAACGACGTGCCGAGCGTAGAAAGATATGTGATATGGTTTT CGATACCTTTGTTTGAACTAAAGTACTTTTTTTGATGATTCAAGGCTGGA CCTTGATAAAATGAACTTCATGaaagattcaaaaaaagaaatatagtatg aaaagacttttaaaacattttattttgtacATATATGATATAGGTTTGTC CACTTAGAAGATTTATTATTGTAAATAAATTCTTGTCAACGTTAGTTTTT ACTTCAATTTTTGTGAAGATTTTTGTTCTCTTGCGGAAAAGCTTCTCTCT GggctttcttcttttttgctcaaaaattaGTTGGTTGTAATTATCCCAAT TTAAATAGTTAGCCAACATCTTTGACTTATAAAAGTGGATACTTTTTTAG TTGTTGTCCAttgtaaaattaatttttatttttatttcgaaaaacacgaa agaaaaatataagattcatgaa

Coding sequence (CDS) from alignment at scaffold_245:76077..79098+

>TCONS_00054754 ID=TCONS_00054754|Name=TCONS_00054754|organism=Clytia hemisphaerica|type=CDS|length=5832bp|location=Sequence derived from alignment at scaffold_245:76077..79098+ (Clytia hemisphaerica)
ATGATTGAGAAGACGGTTTGTTCATATGGTTACATACCAGAAATGATGCG
CCCCCATAATGGCGAATGTAGTGCGTTTCCAGAGGAACAGAGATGTAAAC
AAAACGCCAAAAAGAACGCGAGGCGTCGTGCTGCAGAATCACGAAAAGCG
ATCCGTTGCAGTGATGGAGAATCGGACACCAGTGATGGCTTCACTGTCAA
TTCCGGTGGCTCAGGAAGGTCCGGTGATTGGGGACCACCGAGAATGCGAC
AAAAACCAAAGTATTCCCGAAAACGTCACGAGCACCGAGCTTCATTCACC
GATAGTGGAATTTCGTTAACGAAAACCGATTCTGGAGACTTATCAGAATT
TTCGTATGGAGaacgATATTTCATCAACCGGCCAACAGACCCTTACAGTG
ATAGTTCACATGAAAGACAGTCGCGCATTCTAAAACAACAAGTGGTGGTC
ACAAGAACACAGCGATCGCAATCGAAAATTGAGTCCAAAACTGACGGATC
TTCAGTTTACCAAAAAGAGATCACTTCGCTTAAACGATCTAGCTCTTGCT
CTGCTTTACCATCCAACATCAAACAAATCAACAGACAAGACTCATCCCAA
TCGTCACGCTCAGCGGTCGCACCTCAACAACAGCGTATATCAAAACCATC
CGCAAATATTGAAGAGAAAGAAAACGCCATTCTGGAGCAATGTTACCGCA
ATGAAGGTTTATCTCCAGAATGTGCTGAAATGGGATGCATGTATGATTGC
CATCATCAACATTCAACTTCACGATTCCCTCTACCAGATCATTTAAACTA
TCCACTCAACAAATATTACCAATCTGAAACCAATCTTCATCGCATTCAAC
CACTCAAAAAGATTCGATCAAGCTTGCGTAAATTGCGGAACAAAACCAAC
AATATTCATCTCTCGACACCAGATCGTTATGACAATTACTCCCTCTCAGA
CAATTATTCCATTACACCGACATTGGAATCTTTAGATAGTAGTTATTTGA
ACTcattaaatgactttgaaagCAGTGAAGCCATTATGGCTCGCTTAGCT
AAAAATCCAAACTCTAAAAAAGCATGGgttaagaaaatctttaaatgGAA
TATTGGTAAATCTTACAAcatcaagaataaaaaatcaccGAAGAAAGATG
TCAAGGACAACTCTTCAGAAGTTCAGGAAGAGCCTTCATTGAAAAAACGC
TCTCACTCCACACGCTCCATTCCAGAGGCTTTAATCAACTTCATTTCAAA
AACTCAAGATAAATATTCTGCAACAACAACTGCAACCCATGAATTCGAAT
TTATGGTACCGACAACGTTACAACGAGCCAATAGTATGCCATCTATTGCA
ACCAATCGTACTCAAACTCCCAAAACACGTGATACTGACGTCATCTTTTT
TAACGAGGACGGTCCAAAATCTCAACAAAATCAACATAAAACTCCATCAA
AATTCTTTTCCAATAACAACCCTCAttacgaagaagaagaagagtttGAT
TATTACCCTCATGAAAACAACAACCACCCTGTTAACCACGCCCCACACCA
TTTCAAGCAGCCTTGCTACACTTCATGCCAAGACATCCGAATGGCGCCCC
CGCCTCAACCAACGCCCGGACATTGTCATTGCTGTCAGCATGTTCAGCAT
GGAGCTTACATGCCACCACAGCAATATGTTCAATATATGCACCCTGCTCC
AGTTCAATACGGCTATTATATCCCCAATGGAGGTCACCAACAGCCTCATT
ATCCAGTCGCAGCCGATTATGAAGAAATGGTTCAACCACAACCGATTGCG
TACTACCAGACATCCGATAATTCCGATCTCAAACCCGGGCAACGTAATCC
CCCGATTGTCGCCCCGTTAGATATGAAAGTTTCGGTTGAACGACGTGCCG
AGCGTAGAAAGATATGTGATATGGTTTTCGATACCTTTGTTTGAATGATT
GAGAAGACGGTTTGTTCATATGGTTACATACCAGAAATGATGCGCCCCCA
TAATGGCGAATGTAGTGCGTTTCCAGAGGAACAGAGATGTAAACAAAACG
CCAAAAAGAACGCGAGGCGTCGTGCTGCAGAATCACGAAAAGCGATCCGT
TGCAGTGATGGAGAATCGGACACCAGTGATGGCTTCACTGTCAATTCCGG
TGGCTCAGGAAGGTCCGGTGATTGGGGACCACCGAGAATGCGACAAAAAC
CAAAGTATTCCCGAAAACGTCACGAGCACCGAGCTTCATTCACCGATAGT
GGAATTTCGTTAACGAAAACCGATTCTGGAGACTTATCAGAATTTTCGTA
TGGAGaacgATATTTCATCAACCGGCCAACAGACCCTTACAGTGATAGTT
CACATGAAAGACAGTCGCGCATTCTAAAACAACAAGTGGTGGTCACAAGA
ACACAGCGATCGCAATCGAAAATTGAGTCCAAAACTGACGGATCTTCAGT
TTACCAAAAAGAGATCACTTCGCTTAAACGATCTAGCTCTTGCTCTGCTT
TACCATCCAACATCAAACAAATCAACAGACAAGACTCATCCCAATCGTCA
CGCTCAGCGGTCGCACCTCAACAACAGCGTATATCAAAACCATCCGCAAA
TATTGAAGAGAAAGAAAACGCCATTCTGGAGCAATGTTACCGCAATGAAG
GTTTATCTCCAGAATGTGCTGAAATGGGATGCATGTATGATTGCCATCAT
CAACATTCAACTTCACGATTCCCTCTACCAGATCATTTAAACTATCCACT
CAACAAATATTACCAATCTGAAACCAATCTTCATCGCATTCAACCACTCA
AAAAGATTCGATCAAGCTTGCGTAAATTGCGGAACAAAACCAACAATATT
CATCTCTCGACACCAGATCGTTATGACAATTACTCCCTCTCAGACAATTA
TTCCATTACACCGACATTGGAATCTTTAGATAGTAGTTATTTGAACTcat
taaatgactttgaaagCAGTGAAGCCATTATGGCTCGCTTAGCTAAAAAT
CCAAACTCTAAAAAAGCATGGgttaagaaaatctttaaatgGAATATTGG
TAAATCTTACAAcatcaagaataaaaaatcaccGAAGAAAGATGTCAAGG
ACAACTCTTCAGAAGTTCAGGAAGAGCCTTCATTGAAAAAACGCTCTCAC
TCCACACGCTCCATTCCAGAGGCTTTAATCAACTTCATTTCAAAAACTCA
AGATAAATATTCTGCAACAACAACTGCAACCCATGAATTCGAATTTATGG
TACCGACAACGTTACAACGAGCCAATAGTATGCCATCTATTGCAACCAAT
CGTACTCAAACTCCCAAAACACGTGATACTGACGTCATCTTTTTTAACGA
GGACGGTCCAAAATCTCAACAAAATCAACATAAAACTCCATCAAAATTCT
TTTCCAATAACAACCCTCAttacgaagaagaagaagagtttGATTATTAC
CCTCATGAAAACAACAACCACCCTGTTAACCACGCCCCACACCATTTCAA
GCAGCCTTGCTACACTTCATGCCAAGACATCCGAATGGCGCCCCCGCCTC
AACCAACGCCCGGACATTGTCATTGCTGTCAGCATGTTCAGCATGGAGCT
TACATGCCACCACAGCAATATGTTCAATATATGCACCCTGCTCCAGTTCA
ATACGGCTATTATATCCCCAATGGAGGTCACCAACAGCCTCATTATCCAG
TCGCAGCCGATTATGAAGAAATGGTTCAACCACAACCGATTGCGTACTAC
CAGACATCCGATAATTCCGATCTCAAACCCGGGCAACGTAATCCCCCGAT
TGTCGCCCCGTTAGATATGAAAGTTTCGGTTGAACGACGTGCCGAGCGTA
GAAAGATATGTGATATGGTTTTCGATACCTTTGTTTGAATGATTGAGAAG
ACGGTTTGTTCATATGGTTACATACCAGAAATGATGCGCCCCCATAATGG
CGAATGTAGTGCGTTTCCAGAGGAACAGAGATGTAAACAAAACGCCAAAA
AGAACGCGAGGCGTCGTGCTGCAGAATCACGAAAAGCGATCCGTTGCAGT
GATGGAGAATCGGACACCAGTGATGGCTTCACTGTCAATTCCGGTGGCTC
AGGAAGGTCCGGTGATTGGGGACCACCGAGAATGCGACAAAAACCAAAGT
ATTCCCGAAAACGTCACGAGCACCGAGCTTCATTCACCGATAGTGGAATT
TCGTTAACGAAAACCGATTCTGGAGACTTATCAGAATTTTCGTATGGAGa
acgATATTTCATCAACCGGCCAACAGACCCTTACAGTGATAGTTCACATG
AAAGACAGTCGCGCATTCTAAAACAACAAGTGGTGGTCACAAGAACACAG
CGATCGCAATCGAAAATTGAGTCCAAAACTGACGGATCTTCAGTTTACCA
AAAAGAGATCACTTCGCTTAAACGATCTAGCTCTTGCTCTGCTTTACCAT
CCAACATCAAACAAATCAACAGACAAGACTCATCCCAATCGTCACGCTCA
GCGGTCGCACCTCAACAACAGCGTATATCAAAACCATCCGCAAATATTGA
AGAGAAAGAAAACGCCATTCTGGAGCAATGTTACCGCAATGAAGGTTTAT
CTCCAGAATGTGCTGAAATGGGATGCATGTATGATTGCCATCATCAACAT
TCAACTTCACGATTCCCTCTACCAGATCATTTAAACTATCCACTCAACAA
ATATTACCAATCTGAAACCAATCTTCATCGCATTCAACCACTCAAAAAGA
TTCGATCAAGCTTGCGTAAATTGCGGAACAAAACCAACAATATTCATCTC
TCGACACCAGATCGTTATGACAATTACTCCCTCTCAGACAATTATTCCAT
TACACCGACATTGGAATCTTTAGATAGTAGTTATTTGAACTcattaaatg
actttgaaagCAGTGAAGCCATTATGGCTCGCTTAGCTAAAAATCCAAAC
TCTAAAAAAGCATGGgttaagaaaatctttaaatgGAATATTGGTAAATC
TTACAAcatcaagaataaaaaatcaccGAAGAAAGATGTCAAGGACAACT
CTTCAGAAGTTCAGGAAGAGCCTTCATTGAAAAAACGCTCTCACTCCACA
CGCTCCATTCCAGAGGCTTTAATCAACTTCATTTCAAAAACTCAAGATAA
ATATTCTGCAACAACAACTGCAACCCATGAATTCGAATTTATGGTACCGA
CAACGTTACAACGAGCCAATAGTATGCCATCTATTGCAACCAATCGTACT
CAAACTCCCAAAACACGTGATACTGACGTCATCTTTTTTAACGAGGACGG
TCCAAAATCTCAACAAAATCAACATAAAACTCCATCAAAATTCTTTTCCA
ATAACAACCCTCAttacgaagaagaagaagagtttGATTATTACCCTCAT
GAAAACAACAACCACCCTGTTAACCACGCCCCACACCATTTCAAGCAGCC
TTGCTACACTTCATGCCAAGACATCCGAATGGCGCCCCCGCCTCAACCAA
CGCCCGGACATTGTCATTGCTGTCAGCATGTTCAGCATGGAGCTTACATG
CCACCACAGCAATATGTTCAATATATGCACCCTGCTCCAGTTCAATACGG
CTATTATATCCCCAATGGAGGTCACCAACAGCCTCATTATCCAGTCGCAG
CCGATTATGAAGAAATGGTTCAACCACAACCGATTGCGTACTACCAGACA
TCCGATAATTCCGATCTCAAACCCGGGCAACGTAATCCCCCGATTGTCGC
CCCGTTAGATATGAAAGTTTCGGTTGAACGACGTGCCGAGCGTAGAAAGA
TATGTGATATGGTTTTCGATACCTTTGTTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034496XLOC_034496Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054754-proteinTCONS_00054754-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054754-exon-scaffold_245-1491911889:76077..76899TCONS_00054754-exon-scaffold_245-1491911889:76077..76899Clytia hemisphaericaexon
TCONS_00054754-exon-scaffold_245-1510915933:76077..76899TCONS_00054754-exon-scaffold_245-1510915933:76077..76899Clytia hemisphaericaexon
TCONS_00054754-exon-scaffold_245-1575043694:76077..76899TCONS_00054754-exon-scaffold_245-1575043694:76077..76899Clytia hemisphaericaexon
TCONS_00054754-exon-scaffold_245-1491911889:77032..77237TCONS_00054754-exon-scaffold_245-1491911889:77032..77237Clytia hemisphaericaexon
TCONS_00054754-exon-scaffold_245-1510915933:77032..77237TCONS_00054754-exon-scaffold_245-1510915933:77032..77237Clytia hemisphaericaexon
TCONS_00054754-exon-scaffold_245-1575043694:77032..77237TCONS_00054754-exon-scaffold_245-1575043694:77032..77237Clytia hemisphaericaexon
TCONS_00054754-exon-scaffold_245-1491911889:77316..79098TCONS_00054754-exon-scaffold_245-1491911889:77316..79098Clytia hemisphaericaexon
TCONS_00054754-exon-scaffold_245-1510915933:77316..79098TCONS_00054754-exon-scaffold_245-1510915933:77316..79098Clytia hemisphaericaexon
TCONS_00054754-exon-scaffold_245-1575043694:77316..79098TCONS_00054754-exon-scaffold_245-1575043694:77316..79098Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_245supercontigscaffold_245:76077..79098 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.64413 2.52528 0.66358 0.347251 34.8121 28.1481 77.6968 85.354 28.231 39.4643 30.4617 22.5478 17.9388 17.1611 26.8632 21.2039 17.844 23.1136 9.05533 8.08092 11.7019 11.3384 10.4235 9.36278 10.9166 12.8249 3.58826 2.61282 11.9055 11.8216
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054754 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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