TCONS_00054835 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054835
Unique NameTCONS_00054835
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length901

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054835 ID=TCONS_00054835|Name=TCONS_00054835|organism=Clytia hemisphaerica|type=transcript|length=901bp
gagagagataaAAAGCCAGAAGAAGTTACACAAGCGTTGATTAATTTCGT
TTCTTCAGAAAAGTGGACGCAGAAACTTTTTGGCCAACTTTCAAGAGAAA
GATTTCCGTGTTTGCTTCATCAAAATCAATTATGGCTTTTTATTGGACAT
TCTTTCTGGCAATTATTGGAGCAAGTGCTTATGTTTACCCAAGGAGTAAA
TCAACGGACAATTTATGCAGCCAGCAATATTTCATGAGCAATTTCGTTAA
AGACAGTTCAAATCTCAACGACACACACTACAACCGCTTGAAAAACTGTT
CCAATCCATTGAAGCAGTGCACCAGTTATGCTGGAAATTTCTCAATCACC
TATGCAGAGGATAGAAAGAAAAGATATTTGATCATGTTGAAAGTGGAAAA
TATTCTCAATCAAGGTTGCTGGGGATATGCAATGAGAATCAACGACTCTC
TTCGCACAGAAACTGAATATTTCAACACAGATGGCTCAACCAAAGATTTC
CAAGCATATTATTACATCAAGCTCGGCTTCACTTACGAATTCCTTTTGAC
TCCACTACCGACAGGAAAACCTTTGAGGATACAAACCACATCCCCAAGTC
TGTGTGAAATGGGAGTGTTGGAGATTATAACTACACGTTTGACGAATGGA
GGATTGTTCAACAACTGTAAACATCTACCAGgattcCTTGAGCGACAAGA
AGTAGCGAAACAGATTTGCAATAAATATCCAAATGACATCATCAAACGTA
CCCAAGCTGCAAGAAGAAATTTGGTGGAACACAACTGCAAATTCGAACTC
aatttcaaaagtattttttctttgaagtaaTTTTTACCTtggcttttttc
taatttttaaaatttttctgtgaatcttttgtatttatttttgtaatgaa
c
Run BLAST on NCBI

protein sequence of TCONS_00054835-protein

>TCONS_00054835-protein ID=TCONS_00054835-protein|Name=TCONS_00054835-protein|organism=Clytia hemisphaerica|type=polypeptide|length=232bp
MAFYWTFFLAIIGASAYVYPRSKSTDNLCSQQYFMSNFVKDSSNLNDTHY
NRLKNCSNPLKQCTSYAGNFSITYAEDRKKRYLIMLKVENILNQGCWGYA
MRINDSLRTETEYFNTDGSTKDFQAYYYIKLGFTYEFLLTPLPTGKPLRI
QTTSPSLCEMGVLEIITTRLTNGGLFNNCKHLPGFLERQEVAKQICNKYP
NDIIKRTQAARRNLVEHNCKFELNFKSIFSLK
Run BLAST on NCBI

transcript from alignment at scaffold_245:716304..728481-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054835 ID=TCONS_00054835|Name=TCONS_00054835|organism=Clytia hemisphaerica|type=transcript|length=12178bp|location=Sequence derived from alignment at scaffold_245:716304..728481- (Clytia hemisphaerica)
GAGAGAGATAAAAAGCCAGAAGAAGTTACACAAGCGTTGATTAATTTCGT
TTCTTCAGAAAAGTGGACGCAGAAACTTTTTGGCCAACTTTCAAGAGAAA
GATTTCCGTGTTTGCTTCATCAAAATCAGTAAGTTTAATTGTGATATATT
TTTCGATGAATTACCTGTAAAGAGAACCTTAGTCAAGTCGCATTGACGCA
ATTCCAGGAAATCTTAAGAGTAACTGATGGTCACAATACTGTCTCAAAGT
GAAATTATTCGTTATCAAAATATGCCTATCAAATATGTAGATGGGGAAAT
TTTTCAAGGGGAGCATGTTCCTTGTGGTAAATTTCACGTCGTTATCTACA
TGATCTTAGTTTTCATGTCTTATTATTTCATCCTTAAGCTTTGGCTCGTT
GTCCCAATTCAAATCTGATAAAAAACGGTCCTGACTCGATGACGGTGTAA
AGTTAATCAACTACAGATTTGCATCGTTTTTTATGAAGGAAAAATCTTTA
GTTGATTAACTTCATACTATCATCGAGTCAGGACCGTTCTAACGAAAAAT
AATCCGTCCTAATTATATGTCTACGGGTCAATTTTCTTAAAGTAATTTTT
TGAGTGGTGCATTAATGCATGGCCTAGTGTCCTGGAATGGATTTTTGAAA
AAAGACCAAGTATGGGCGAAGAAACTTTTTTGGAGCCATGGGTGGGACAA
ATTTAGGGAGCGGAAAAGGACTTTGCAGATCATCTAGAAAAAACAACTTT
TTCTAGATAAACAACTTTTTCTAGGTAAAGACCCTTTTTCTTGCTTTCAA
ATGTGAAAATTAGTAGTAAAAGGAATCAAAATGAGAAATTTTTAAGTAAA
ATCCAAAATTGAAGGCATTTTTAGACCATTGCAATTCTTTTTAGACATTT
TTTGGCACTAAAATTTTTGACTGGAAGTTGATCTGAGGGGGGACTCGAAC
AGGGGAATTGAAAATTTTCACTTTAGGTATGGGGGGGATAGACCCTGAAG
GACACTATGCATGGTGGTCTCTGATCGACTTTAAGGTTCAAGATAACTGA
CAACCAAAAACTTTACAATACGTTTCTTAGCAACTAGTTTTAGCGAGTTC
ATTGACTACGAAGTGTTTGTTTGTGTGTTTGTTTTCGGTACTTATATTGT
AATCGTCCTCATTGTAAACGATATTGATTAATTGATAATTAATAAGTTGT
TCTACGTAGCTCCCCCCCCACTTCAGCGTGGAGGATCACGATACTAAATT
TGTATATGGAGATAGACGATATAACATTTTTCAGTGATTTACTCCGGAAA
AGAATCCGCGTCAAGCAAAGTTACTTAACAAGAACTAGCTTAGCTAAGTG
GGTGTGATTTTTTATAATAATTTTCATTTTATAGCAAAGCAAATCTGAGG
AATGCTGACAGGCTCTACTGACCCCCAAAGTATCATAATTTTAATATGAT
GTCACTCCCACCCAATGAAGTAGAAGCTCGAAGGGCTAGAAGTAAATCTC
CTAGGTAGCTGGATTTGAAGCCATTAAACCCTACCAGGTTGCGCGGCCTA
GCGCTGTCCGCGTGGGTTTCATACAAATGCCAAATTGAAAGTAAAATTTA
CCGCCAGATTTTCAAAAATGTACAACTCGAAAACAAAGAAATCGTTAGAT
CCGTCATCAAAAATACGGAGCACATTTTAAAGGCTTCACTTTTTCTTCAC
TTTTTCTTGAGAAAGGTTGAAGATTCGCTTCTAGCTTCGTTTCGGGCTTA
TATTTCATCGCTCCCTCCCCTACAGTGTATCTTTCTCAAAAATCTATGAA
ATCTCAGTATTTTTTACTAAAATAAGCTCACCAAAACCAACTCAATCACA
TCATCAACCTCAAAATAACCAAAATGGAAGAGGACACGCCGANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTTGGTTCAGAAAAAGAAAAGTTGTCCC
TCCTTCACAGCCTATCAGCCCTCAAAGGAAATGACGACTATAAAGGAATA
AGCATTACGGAAGACCTAACTCGAACCGAAAGAGCAGTTCTAAAGGAATG
GCTGGACAAAGCAAATAATCTGAACCTAGACGATACTGAATGGGTACATC
GCGTTCGGGGAAACTCAAAAAACGGTTACGGCCTCAGGAAGTTTCGTCGA
AGAGAAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNGATATTGATTAGCCTCGAGCTAAGTACACATTGTACTACTTTGC
ATCAACTTTAAAGAAAAGAAACATAAACATAAACATAAACATAAACATAT
CTTTCAACCGGGCTGTAAGATCATTTTCTGAAAGAAACCGATCAACTGTA
CACCCCTGTCTCAGTGCCCCGGTAGAACTTTTTCCCTCAGTGGGGATGAA
AATTTCTATCAAAATGCCAATGGGGATAGAAAATCTATTGTTTCCAGCTC
GAAAATTCCAGTGAGGATGGTTTTTACATTCAGTTTTCAATAGGGATGAA
ATCATAGAGCAATTTCGCAGTGGGGTTGAAATTTTAGGATATTTTTCTAC
CGGGGACGATTTTTTGGACTATTTTTCCACCAGGGTGGGGGGTCCACCGG
GTCTGTGACACAGGGGTGTAACTGTAATAAATGTAATAAAGTCCATATAC
TATAGGGCTTATTTATGAACAATATCAGTGAAACCATAGATCATATATCA
GATTATTCTTAAAGACTTTGTGGTTAGCTTTTATTGGCATAGTTTGGTAT
CTTGTTGTTGTTATGTTTGATATTATAAGAAATATTGTTTATTTGTTGTT
GGGAAAACAAGTTGTTTATTTTATGATTCCTTAAATCGGAAAAATTCGGT
CTTCTTTGAGTTACATTACTTTATATCCGGTATTTCAGTTTTTTGGGCCG
ACTTTTCATTGGTACTTCAGGTGAATCATCCTCAGATGAGATGGGGGTCA
TGAAAGGTGTTTAAAAAATTTACTAAAGATTATTCCCATAAAAAGCATAT
AGTGGTATAACGGTAATCGCCCTTATATTTTGTGCAGGAGGCCCTAGTTT
GATTCCCACTGTGATACTACGGTTCACTTGGCCTGGGTCAACGCATACCA
TGTGAGGGGAATCGGGTAAAATTATTCTGATACAAGAGTGTAAGTAATGG
AAATTGTGGTGTATGGTGACACGCATCCCGTTCTACGTTCGCCAACGAGC
ACTACACTCTCCCACTTGGTTCGAGTGTCTTCACTGAGCATCATCATATC
TGTGTGTCATGTGCACAGAATTAGCAGTGTATAGACAGTGCTAAGCATTC
CAACCTGAAAAAGGAGGAATTGCCTTTTATAACCGCTGTTGATTAATCAA
TCCCAATTCATTTTTGAAAGAGTGTTGAAAAATAGTTGGCAAAACGAGAT
CATTACCACGAGGGGAATCATATCCGACATGACAACCCTTTATGATTCCT
TGCACAGAAATATTTAGAACTGATTCTATTCTCTAGCCCGGACAAAATAC
GTCAAAAGCACATCTTATTCTTCCAAATCGGTCATCCTCTCGAAATTCTT
TCTTATTTGATCATTATTTTGATCTTTGAAAAAATCAAAGGAAAATGCCA
AAATAAATCTACTTTAAATTCTCGCATCGCATCCCTTCTGGCGGAAGAAT
GTGTTAGATCTTTGGGAAAATACCACTTAATTATAAGGATATAAAGGAAG
TCGTTTGATTGGATTGAAAGCAACTGCAATTAGAAAGCCCTAGTTGTAAT
ATTCGTGATGAAGCAATGACGTCACCATTGAGATGAGTTTCATTCATCAA
CTACAGACTAAATTCCAAAAATCCGATTTAAAACAAGCTTAGTTGCGTAT
TTCGAGCGCATTCTTGGCACTATCTTCATTAATCGTATATGCGCAATACA
TTTGTAAAAGCTATTATTTCGCAATCTATTAAGATATTAGCATTATCATT
CATTCAGATACAAAGTGGGGAAATTGGTGTAAAAATAACGCTTGTCGAAT
GTTTTTCGATGATTTCACTTTTTCAGGGCTGATAACTGCTTGAAATGTAT
AAAAATTGTAAAATGGAGTCCTTAATTACTATTTTGAACATTACTATGGC
ATTTCCTCTATATCTCTCAGAGACACCACTTTTTGAGGGGTACACAATAA
TACCCAGAAATGATGACAGGAGTAAAGTTAACAACACTTCATGGTCCTGC
AAAGGGGACAATCCGAGTCATAAACAAAGTGAGACCAGGATCATTATTTA
AGAAGACTTCAAGCAGGAAGGAAAATTCACCAACGGTTTTTTCTGCTAAA
GTGAGTTTTCGGTAGGGTTGGAAGTTTTCGAAACTCGACAGCGGTAATAT
TTTTAAACTACTGCCCTTATCGGTTGTAACCTATGCGCATACATTTTTAT
ATATTTTGATATCAGTAATAATAAATTTTTCTAACTGTACCTCCGGGAAA
CATAGACCCACTTAGTAAGCGCTAGGTTCCAAATAATTCCCACAGGCAGT
AGCGTAGACAGGAGGGACGCAAAATTTGTGTAGGCTACGCTACTGCACAG
GGTCACTGAGGCAGGGGTTTTAGAATCATTGAGCAAGCTACCATCCATAG
TTAGGTTTTCTGAAAGTTGTTTTGATTTGAATAGTTGAATTTGAAAATAG
ATATTTGCTGGAAATTCATTTCCTTTTCTCATCAGCATTTAAAGTTGTGC
AACTAATTATTTTAGTACAAACATTAAATCAAAGTAACTCATTAAACAAG
CATGGTGAACCAATTATTGCGTGATAGAAAGCATTTATCATGATATTTTG
GACGCTTCATATAAGCACTCTAATCATCCATCACCACAAAATTACCTCAA
AATTAAGCCGCCTTCGATGCAATCCAAAATTGATATTTTCGGTCACGGAT
TTAGATAAAAACTAAAAGTTTTAGAAACAAAAGTATTTTTTTAAGCCAGC
CCTCTCTATACTCATAATCGCTTTGGAGACTTTCAATTATCAAATGATAC
CTAAATGAGATTACCAAGAATATCTGAAAAAAATGCTGACGATGTTCTTT
CAACCGTAACAGGAAGCTCTTTATGATTTTCCTCTCACGTTGAAGATGTC
GTCATAAATGAGATGACTCGACTCCAGTCTCTTTGATTATTTGTGCCCTT
TTCCTCTATAAAAGGGGACCACTTTATTGAGTTACTTGACAAAAATCATT
TGCGAAGAATCAATGACTAAGAAAAGTTCTTTAAAAAGTTGACTTATTTT
GCTTTCAGATTATGGCTTTTTATTGGACATTCTTTCTGGCAATTATTGGA
GCAAGTGCTTATGTTTACCCAAGGAGTAAATCAACGGTAAGTGATAATTA
CTGACTGTACGTGATGGGTGACTGACGCACTACTCTTGGGTATCTATTAG
CCAGGGTAGGGTTGGAATAAGTGGGAGAGTTGAAAAAATTTGAAAACTTA
ATAAGCATGGGGGTTGGAATAAATATGTCCTGGGTGGAAATTTTTTTAAA
AATTAACTAGCAGGGGGACGGCTATTAGGTACCCGAGAGTAACAGGCTAT
CGGTGTGAATAAAACCTGATGTTCATATGCCAAAGTACTCTTTACCGGAG
TGTATGTCACATTTATCGCTTCGTAGTACACTCTGTGCGCATTCTCTGTT
TGATAAAAAAATTCCCTTACGAGACCATGATTTATAAATGGCATCAACAC
TTCTCTCATCGTCTCCCCTCTCTCAACAACACTCAATCACAGCGGTCAGT
TTGAAGAATCTCAAATGACAACAGACCCTATACGGCAATGAATTTTGATT
TTACTTATTTGCCGATGAAGACGAGCTTCTTGTATAATTTTTTATGAAGC
TGCAACTTGAAGGTTGGATTCCGTTTTAGAACTAATGTTAAATGATATCA
ACGATGACGCATGATTGATAAATCTTTTTCATCTTTTTTGCAGGACAATT
TATGCAGCCAGCAATATTTCATGAGCAATTTCGTTAAAGACAGTAAGTAA
AATATTATATGCTATTTAAATCCTACTTCAAAAATATAAAAATTTCCTGT
TTAGCCCTGTCAACTTTTTCAATATTTTGATATTATCTCGTTTCAGGTTC
AAATCTCAACGACACACACTACAACCGCTTGAAAAACTGTTCCAATCCAT
TGAAGCAGTGCACCAGTTATGCTGGAAATTTCTCAATCACCTATGCAGAG
GATAGAAAGAAAAGATATTTGATCATGTTGAAAGTGGAAAATATTCTCAA
TCAAGGTAAAAACTCGAAAGACTAGACTCGAAAAAAATACCCTTGGTTGA
CACTTCATGTTATAATCAGGTGGCTACCTTTGGGGTACTAGGTTTGCGAG
ATGTCCAAGCCAAAGTTTGAAATCGACCCTTAGAGAGACTTAATTCCAGA
GATATTTTTGCCACACTTATTTTCCCAAAATTTCAGCCAAAATTTTATTC
CAATTTTTAAGAATTTATGACCCTTTGAGGGGGTCGATTTTTTATTTTCG
TAATTTTGGAAAAGAGACTTAATTTCGAGGGTGTGAAATAGAGACCCTTA
CCGCTCGCACATACCCGGCACCCATTTTGCCTAAGTACCCCCTACCCCCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTAAGTCCCCCCCCCCCCCC
CCCCCTCGAGCTGGCTACAACGCTGTTTTAATGAGGCCTGGTCGAACTAA
TTGTTTCTTTGTACTGCTGATCGAGCTTGAGACCAATTCGCCTGGTTTCC
CATCTAAATCAATTCATCCATGCAATACTTGGCCATAATCATTAAACAGA
AAATTCCTGACCCTCTATACATTATGCAACCTAATAATGTTGCATGTGTG
GTCTTCGAATTGTAACAAAAGAGACTCTGATTCAGGTTCTAATTAAATTT
CAATTAATTATTAATTTGGTTACTTTTCCAATGCTGTGTGGTCCCTGTGT
GGTCTTGAGCTAAAATAAACAATTATCACTAAAGCCAATATTATAATCAA
AACACATGTAAGCAAAGGTGTGGTCTAAATATCAACTTTCTTACTTTCCA
TAACAACACTATTGAGTTTATTGGGTATTCAGTAGTTCGTTTATGTCATA
TCTAGGTTGCTGGGGATATGCAATGAGAATCAACGACTCTCTTCGCACAG
AAACTGAATATTTCAACACAGATGGCTCAACCAAAGATTTCCAAGCATAT
TATTACATCAAGCTCGGCTTCACTTACGAATTCCTTTTGACTCCACTACC
GACAGGAAAACCTTTGAGGATACAAACCACATCCCCAAGTAAGATACTAA
ACAACCCTTCCCTGTTTCACATCCCCAAATAAGATACTAGACAACCTACC
CCTGTTTCACAACTTTAAGTAAGATACTAAACCACCCATCCCTGTTTCAC
ATTCCCAAATAAGATACTAGACAACCTACCCCTGTTTCTCAGCTCTCAAT
GGAATCAACTCAAATAAGGAATACCCCAAGTTTCGTCGAACTATCAAAAA
CTTCTTTCTTTGAGAGGTTTTTCATGTCTTGTTAAGTTACGTAACTTCCG
CCATTATGGAAGCAAACGTTCGAATCTGTAGAGGCGATCTCATAGGCCAT
TTCACGGTCGAAATGGATCATGGGTAATCAGGACTGATTGCGCCTCCATT
ACGGCTTCCCGTTGGCTAGACGCAAAAATCTTCGATTTTTTTCAAAACTT
TGGACCAATAGTAAGTCGTTATTAGCGCGCAGTGGTCCTGATTACCCATT
ACGCTTTGCGACTGTGAAATGGCCTATACGCAAATCGAACGTTTACTTCC
ATAATGACGGAAATTACGTAACTTAACAAAAAATGAAAAGCTTGTATAGA
CAATAGCAACCTTTACTCCACCAAATTTTTGAGCCCGAACTTACCACGTT
GAATATTTATATACAGAGCTGAAGGGTGTAAGTTTTTTCTCTTAATTTGA
AATCTGGAATATGTTTTTCCGTTATTAATTTCCCCTTCTTTTACAATATT
CACACAAGTCTTAGAACTTGACAGTGTATGGTTATATTTGTTTTTTCTTT
GTAAATTTTGCACTGTTTCTGTAAATTTACAGGTCTGTGTGAAATGGGAG
TGTTGGAGATTATAACTACACGTAAGTGCAGAGTATTTGTTTTTATTGTT
GTTAATTATTGTTGTTGATTGTCCAAAACATCTTAAAGGTCCTTGTGCTA
AAAGCTTGGTCAAAAAAAGTTTTTCACGTTAAAAAAATTGCCCTTAAATT
TAAAAACAACATTGAGAATATCTAAAACAACTACCTCTTTTGGGACTGTC
CCAAAAACAACGTCTATTTGCTTTAAGTGAGAGTGCACACTTTTTCTACT
ATGTGAAACCCATGCCAGTGTTATTAGAGTAATGGAGACATTCGACTTTT
TGTTATGAAAATGTGTAATAACTTCTTTAAAGTGGGGGGGGGCGCACGGG
GTTTGCGATTTCCGAAATTCCGTAAAAAAATACTTGCAATTCTGATACCG
ATTTTTTAGGTATTTTTCCTCGTTTTGACTAATTTTTCATCAAATTTGAT
TTTTCATGTAAGTATGAATTCCGAAAAAAGGGGGAAAAAATCAATAATAA
GGAAATTTTGAAGCAAAAATTCATGGATTTCCGATACCGTAACAATACCG
AAATACCGAAGGAATCTTGCCCGATTTCCGAATTTCCGAAGAAGAAAGGA
TATCAAAATACTTATCAAATGCAACAATTTTTAGGTTTGACGAATGGAGG
ATTGTTCAACAACTGTAAACATCTACCAGGTAACGATTTCTTCAATAGAT
GATGCTTCATATAAAAAAATATATCACTGTTAGTCCGAAGATATCGAATG
ATGAGAGCAGTATGACGCATCCCTTTAGCTTCCGGTCACTTTTCAACATC
TTCAGATTGTTGGTTTTCTCTCACAAGTTTTTTATAAGAACAAACTATAT
AAGATATATAACAGCATAAGGCTCGATCGCCATAATATTAAGAACAAGCT
AAGAACATTTTAAGGCTCTGAAGACTCTAAGACACATGATTTCTTAGGAA
AATGGACCAAAATACTCAAAAATTGTGAAAATAAGAACATGTGAAGAACA
TTTTTTAGACTTAAAACTCAAAAAGCTAAGAACATCTGAAGGCTTCAAAA
CATTTTGGATATTCTTATAAAAAATGGACAAGTAAATGAACATGTTTTCA
TTTTTCAGGATTCCTTGAGCGACAAGAAGTAGCGAAACAGATTTGCAATA
AATATCCAAATGACATCATCAAACGTACCCAAGCTGCAAGAAGAAATTTG
GTGGAACACAACTGCAAATTCGAACTCAATTTCAAAAGTATTTTTTCTTT
GAAGTAATTTTTACCTTGGCTTTTTTCTAATTTTTAAAATTTTTCTGTGA
ATCTTTTGTATTTATTTTTGTAATGAAC

Coding sequence (CDS) from alignment at scaffold_245:716304..728481-

>TCONS_00054835 ID=TCONS_00054835|Name=TCONS_00054835|organism=Clytia hemisphaerica|type=CDS|length=4893bp|location=Sequence derived from alignment at scaffold_245:716304..728481- (Clytia hemisphaerica)
GATTCCTTGAGCGACAAGAAGTAGCGAAACAGATTTGCAATAAATATCCA
AATGACATCATCAAACGTACCCAAGCTGCAAGAAGAAATTTGGTGGAACA
CAACTGCAAATTCGAACTCAATTTCAAAAGTATTTTTTCTTTGAAGTAAG
TTTGACGAATGGAGGATTGTTCAACAACTGTAAACATCTACCAGGTCTGT
GTGAAATGGGAGTGTTGGAGATTATAACTACACGTTGCTGGGGATATGCA
ATGAGAATCAACGACTCTCTTCGCACAGAAACTGAATATTTCAACACAGA
TGGCTCAACCAAAGATTTCCAAGCATATTATTACATCAAGCTCGGCTTCA
CTTACGAATTCCTTTTGACTCCACTACCGACAGGAAAACCTTTGAGGATA
CAAACCACATCCCCAAGTTCAAATCTCAACGACACACACTACAACCGCTT
GAAAAACTGTTCCAATCCATTGAAGCAGTGCACCAGTTATGCTGGAAATT
TCTCAATCACCTATGCAGAGGATAGAAAGAAAAGATATTTGATCATGTTG
AAAGTGGAAAATATTCTCAATCAAGGACAATTTATGCAGCCAGCAATATT
TCATGAGCAATTTCGTTAAAGACAATGGCTTTTTATTGGACATTCTTTCT
GGCAATTATTGGAGCAAGTGCTTATGTTTACCCAAGGAGTAAATCAACGG
ATTCCTTGAGCGACAAGAAGTAGCGAAACAGATTTGCAATAAATATCCAA
ATGACATCATCAAACGTACCCAAGCTGCAAGAAGAAATTTGGTGGAACAC
AACTGCAAATTCGAACTCAATTTCAAAAGTATTTTTTCTTTGAAGTAAGT
TTGACGAATGGAGGATTGTTCAACAACTGTAAACATCTACCAGGTCTGTG
TGAAATGGGAGTGTTGGAGATTATAACTACACGTTGCTGGGGATATGCAA
TGAGAATCAACGACTCTCTTCGCACAGAAACTGAATATTTCAACACAGAT
GGCTCAACCAAAGATTTCCAAGCATATTATTACATCAAGCTCGGCTTCAC
TTACGAATTCCTTTTGACTCCACTACCGACAGGAAAACCTTTGAGGATAC
AAACCACATCCCCAAGTTCAAATCTCAACGACACACACTACAACCGCTTG
AAAAACTGTTCCAATCCATTGAAGCAGTGCACCAGTTATGCTGGAAATTT
CTCAATCACCTATGCAGAGGATAGAAAGAAAAGATATTTGATCATGTTGA
AAGTGGAAAATATTCTCAATCAAGGACAATTTATGCAGCCAGCAATATTT
CATGAGCAATTTCGTTAAAGACAATGGCTTTTTATTGGACATTCTTTCTG
GCAATTATTGGAGCAAGTGCTTATGTTTACCCAAGGAGTAAATCAACGGA
TTCCTTGAGCGACAAGAAGTAGCGAAACAGATTTGCAATAAATATCCAAA
TGACATCATCAAACGTACCCAAGCTGCAAGAAGAAATTTGGTGGAACACA
ACTGCAAATTCGAACTCAATTTCAAAAGTATTTTTTCTTTGAAGTAAGTT
TGACGAATGGAGGATTGTTCAACAACTGTAAACATCTACCAGGTCTGTGT
GAAATGGGAGTGTTGGAGATTATAACTACACGTTGCTGGGGATATGCAAT
GAGAATCAACGACTCTCTTCGCACAGAAACTGAATATTTCAACACAGATG
GCTCAACCAAAGATTTCCAAGCATATTATTACATCAAGCTCGGCTTCACT
TACGAATTCCTTTTGACTCCACTACCGACAGGAAAACCTTTGAGGATACA
AACCACATCCCCAAGTTCAAATCTCAACGACACACACTACAACCGCTTGA
AAAACTGTTCCAATCCATTGAAGCAGTGCACCAGTTATGCTGGAAATTTC
TCAATCACCTATGCAGAGGATAGAAAGAAAAGATATTTGATCATGTTGAA
AGTGGAAAATATTCTCAATCAAGGACAATTTATGCAGCCAGCAATATTTC
ATGAGCAATTTCGTTAAAGACAATGGCTTTTTATTGGACATTCTTTCTGG
CAATTATTGGAGCAAGTGCTTATGTTTACCCAAGGAGTAAATCAACGGAT
TCCTTGAGCGACAAGAAGTAGCGAAACAGATTTGCAATAAATATCCAAAT
GACATCATCAAACGTACCCAAGCTGCAAGAAGAAATTTGGTGGAACACAA
CTGCAAATTCGAACTCAATTTCAAAAGTATTTTTTCTTTGAAGTAAGTTT
GACGAATGGAGGATTGTTCAACAACTGTAAACATCTACCAGGTCTGTGTG
AAATGGGAGTGTTGGAGATTATAACTACACGTTGCTGGGGATATGCAATG
AGAATCAACGACTCTCTTCGCACAGAAACTGAATATTTCAACACAGATGG
CTCAACCAAAGATTTCCAAGCATATTATTACATCAAGCTCGGCTTCACTT
ACGAATTCCTTTTGACTCCACTACCGACAGGAAAACCTTTGAGGATACAA
ACCACATCCCCAAGTTCAAATCTCAACGACACACACTACAACCGCTTGAA
AAACTGTTCCAATCCATTGAAGCAGTGCACCAGTTATGCTGGAAATTTCT
CAATCACCTATGCAGAGGATAGAAAGAAAAGATATTTGATCATGTTGAAA
GTGGAAAATATTCTCAATCAAGGACAATTTATGCAGCCAGCAATATTTCA
TGAGCAATTTCGTTAAAGACAATGGCTTTTTATTGGACATTCTTTCTGGC
AATTATTGGAGCAAGTGCTTATGTTTACCCAAGGAGTAAATCAACGGATT
CCTTGAGCGACAAGAAGTAGCGAAACAGATTTGCAATAAATATCCAAATG
ACATCATCAAACGTACCCAAGCTGCAAGAAGAAATTTGGTGGAACACAAC
TGCAAATTCGAACTCAATTTCAAAAGTATTTTTTCTTTGAAGTAAGTTTG
ACGAATGGAGGATTGTTCAACAACTGTAAACATCTACCAGGTCTGTGTGA
AATGGGAGTGTTGGAGATTATAACTACACGTTGCTGGGGATATGCAATGA
GAATCAACGACTCTCTTCGCACAGAAACTGAATATTTCAACACAGATGGC
TCAACCAAAGATTTCCAAGCATATTATTACATCAAGCTCGGCTTCACTTA
CGAATTCCTTTTGACTCCACTACCGACAGGAAAACCTTTGAGGATACAAA
CCACATCCCCAAGTTCAAATCTCAACGACACACACTACAACCGCTTGAAA
AACTGTTCCAATCCATTGAAGCAGTGCACCAGTTATGCTGGAAATTTCTC
AATCACCTATGCAGAGGATAGAAAGAAAAGATATTTGATCATGTTGAAAG
TGGAAAATATTCTCAATCAAGGACAATTTATGCAGCCAGCAATATTTCAT
GAGCAATTTCGTTAAAGACAATGGCTTTTTATTGGACATTCTTTCTGGCA
ATTATTGGAGCAAGTGCTTATGTTTACCCAAGGAGTAAATCAACGGATTC
CTTGAGCGACAAGAAGTAGCGAAACAGATTTGCAATAAATATCCAAATGA
CATCATCAAACGTACCCAAGCTGCAAGAAGAAATTTGGTGGAACACAACT
GCAAATTCGAACTCAATTTCAAAAGTATTTTTTCTTTGAAGTAAGTTTGA
CGAATGGAGGATTGTTCAACAACTGTAAACATCTACCAGGTCTGTGTGAA
ATGGGAGTGTTGGAGATTATAACTACACGTTGCTGGGGATATGCAATGAG
AATCAACGACTCTCTTCGCACAGAAACTGAATATTTCAACACAGATGGCT
CAACCAAAGATTTCCAAGCATATTATTACATCAAGCTCGGCTTCACTTAC
GAATTCCTTTTGACTCCACTACCGACAGGAAAACCTTTGAGGATACAAAC
CACATCCCCAAGTTCAAATCTCAACGACACACACTACAACCGCTTGAAAA
ACTGTTCCAATCCATTGAAGCAGTGCACCAGTTATGCTGGAAATTTCTCA
ATCACCTATGCAGAGGATAGAAAGAAAAGATATTTGATCATGTTGAAAGT
GGAAAATATTCTCAATCAAGGACAATTTATGCAGCCAGCAATATTTCATG
AGCAATTTCGTTAAAGACAATGGCTTTTTATTGGACATTCTTTCTGGCAA
TTATTGGAGCAAGTGCTTATGTTTACCCAAGGAGTAAATCAACGGATTCC
TTGAGCGACAAGAAGTAGCGAAACAGATTTGCAATAAATATCCAAATGAC
ATCATCAAACGTACCCAAGCTGCAAGAAGAAATTTGGTGGAACACAACTG
CAAATTCGAACTCAATTTCAAAAGTATTTTTTCTTTGAAGTAAGTTTGAC
GAATGGAGGATTGTTCAACAACTGTAAACATCTACCAGGTCTGTGTGAAA
TGGGAGTGTTGGAGATTATAACTACACGTTGCTGGGGATATGCAATGAGA
ATCAACGACTCTCTTCGCACAGAAACTGAATATTTCAACACAGATGGCTC
AACCAAAGATTTCCAAGCATATTATTACATCAAGCTCGGCTTCACTTACG
AATTCCTTTTGACTCCACTACCGACAGGAAAACCTTTGAGGATACAAACC
ACATCCCCAAGTTCAAATCTCAACGACACACACTACAACCGCTTGAAAAA
CTGTTCCAATCCATTGAAGCAGTGCACCAGTTATGCTGGAAATTTCTCAA
TCACCTATGCAGAGGATAGAAAGAAAAGATATTTGATCATGTTGAAAGTG
GAAAATATTCTCAATCAAGGACAATTTATGCAGCCAGCAATATTTCATGA
GCAATTTCGTTAAAGACAATGGCTTTTTATTGGACATTCTTTCTGGCAAT
TATTGGAGCAAGTGCTTATGTTTACCCAAGGAGTAAATCAACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034542XLOC_034542Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054835-proteinTCONS_00054835-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054835-exon-scaffold_245-1575043694:728354..728481TCONS_00054835-exon-scaffold_245-1575043694:728354..728481Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1575043694:720446..720523TCONS_00054835-exon-scaffold_245-1575043694:720446..720523Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1575043694:719790..719838TCONS_00054835-exon-scaffold_245-1575043694:719790..719838Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1575043694:719527..719685TCONS_00054835-exon-scaffold_245-1575043694:719527..719685Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1575043694:718444..718626TCONS_00054835-exon-scaffold_245-1575043694:718444..718626Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1575043694:717611..717649TCONS_00054835-exon-scaffold_245-1575043694:717611..717649Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1575043694:716953..716997TCONS_00054835-exon-scaffold_245-1575043694:716953..716997Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1575043694:716304..716523TCONS_00054835-exon-scaffold_245-1575043694:716304..716523Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1510915933:728354..728481TCONS_00054835-exon-scaffold_245-1510915933:728354..728481Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1510915933:720446..720523TCONS_00054835-exon-scaffold_245-1510915933:720446..720523Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1510915933:719790..719838TCONS_00054835-exon-scaffold_245-1510915933:719790..719838Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1510915933:719527..719685TCONS_00054835-exon-scaffold_245-1510915933:719527..719685Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1510915933:718444..718626TCONS_00054835-exon-scaffold_245-1510915933:718444..718626Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1510915933:717611..717649TCONS_00054835-exon-scaffold_245-1510915933:717611..717649Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1510915933:716953..716997TCONS_00054835-exon-scaffold_245-1510915933:716953..716997Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1510915933:716304..716523TCONS_00054835-exon-scaffold_245-1510915933:716304..716523Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1491911889:728354..728481TCONS_00054835-exon-scaffold_245-1491911889:728354..728481Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1491911889:720446..720523TCONS_00054835-exon-scaffold_245-1491911889:720446..720523Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1491911889:719790..719838TCONS_00054835-exon-scaffold_245-1491911889:719790..719838Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1491911889:719527..719685TCONS_00054835-exon-scaffold_245-1491911889:719527..719685Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1491911889:718444..718626TCONS_00054835-exon-scaffold_245-1491911889:718444..718626Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1491911889:717611..717649TCONS_00054835-exon-scaffold_245-1491911889:717611..717649Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1491911889:716953..716997TCONS_00054835-exon-scaffold_245-1491911889:716953..716997Clytia hemisphaericaexon
TCONS_00054835-exon-scaffold_245-1491911889:716304..716523TCONS_00054835-exon-scaffold_245-1491911889:716304..716523Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_245supercontigscaffold_245:716304..728481 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0512684	0.149984	0	0.0567916	1.76797	0.824714	1.02637	3.52027	0.000563483	0	0.521891	0.00505662	2.15199	1.68451	2.40459	3.39694	1.15461	5.12522	1.37925	7.37314	2.15744	2.4489	0.542858	1.60328	1.83744	0.463179	3.85205	1.87563	0.855399	0.753689
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054835 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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