TCONS_00054838 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054838
Unique NameTCONS_00054838
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1904

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054838 ID=TCONS_00054838|Name=TCONS_00054838|organism=Clytia hemisphaerica|type=transcript|length=1904bp
CTTTGTTTCTCGTGAAGGGAGTCAGGCTCTCAATCATTTTATAAGTTTGA
GGAAGAAACATCTATTTGgaaactgaaaatttcaatttgaaaaagttttg
taaTTTGCTCTCTATTCAGCCTAAGCGCAATGGCCTTTCAGCCTTACGAA
GGTCTCCTTGAAGATTCAACTATGGTAAGCCAACAGCCGAATGATGCTAA
AAGTAAATCTGAAATGCGCCGTACTCGAATCAAAATGTTGTTTGAAGATT
TTCAGCATAATTTCAAATTCCGCGAAGATACGAAAATCCACGTGGGGCAA
AATGCCTGAAGATAAATTAAAGTTTTCTCTACTACCATTCCAGGGTGAGA
TCGAATATTTGGAGTCAAGAAATGACGATTTGATTAACGAAAACAACAAA
ATCCGGAGTGAAAATGACGAACTTCACGAGCAGATCAAAGATTTAGAGTC
ACGTTATTTGCATTCCTTGAAGCGATCAGCAAGTGAATTGGAAAGAGGAg
gttttcaaaatggtagcagtAGCAATGGTGCAGATAATTTGAACGGTGAT
ATTCACACTATCTTGAAGTTGTCAAGTAAATTACAAGAAGTAATGAGTAT
CAATGAAACAATGGCACAAACTAATTGCAATTTGAAAAACGACATCAAGT
GTCTGCGTCAAGAGAAGCAACAAAACttagatgaaatcaaaattctgAAG
GAACAACAAAAATTGATCGACTCTCCTCAAAGGTACAACAAATACACTGT
GGTAGCTCTCCAAACCAAAGCAGATGGCTATGAACGTGAAatcaaacatt
tgaaaaaagctttaaaacgatcAGACGAATATATTGAAAAACTAACCACT
GAAATTGAGACGTACAAACGAAGCAGCAGTACACAAAAATCACCAaatta
cccagcctctaaagtgtCTGACGATAGAAATGTGTTCGGGACACAAGCTA
ATGATATGAATAATAGACTAAAGTTGTATGGTGGTGTTACAAACAGTTTT
AGTAAGACCATGTCGAGTGCAAGTGCAACTTTACAGAGTCTTGTAAGACA
CAATGAACAAGGGATGAATGATGATCAGTCAATGTCAAAAATCTGGAATC
CAACTCAACCGTCACCGAAAAACTCTTTAATtacagaaaatattgaaaac
tcaaagaaatttgaaatgctAGAGACCAACCCCAAACAAGATCAAGCTCT
TATATCCAACCCGTCTCGTTTTCCAGCATGTGCGAAATTATTGGAGCTTT
CCAAACAACATGACATTACACCTGATAAAAATGGAACACCATCTCCTTCC
TCTAGAAGTGACCCTGAACAGAAAAATCAGCCAACCAGCACAGTAGGAAA
TTCAAGTAGACATTCTTCAACACCTGTTTCACCTAGTCGTAGCCCAGTAG
TCAACTATTCTTCGTCTGGCAGAACAGAAAACTTCTCTTCACCTCATAAC
AATGGATCACCGAATCAACAAATTTATCAACGCGAAAACGAGGCTGACGA
AATAACCATAGTGATGCCATCAACAGAGAGCGCGTCGCATTGGTTACAAT
CTACAAATCAACATGGTGGACGGAGCAGCGCAGAAAGACATGTGAATAGT
GAAGAAAGATCGTCTTCACCCGCTTGGCATCAACCTTCTAGATACAATAA
TAAGACTAATGGAAGTCGAATAGGTTTTGATGCAAGTATGCTTTCTTCCA
AAGAAAGAGGACTGTTTTCACCagcaaagaaaatcaaaactgaaGTATGT
TACGAATGATATCAAAAAATTGGAATTtcatgaaaacttttttttgaccc
CGTGTATATCAGAACCTTGTTAATACTTTATCGACTTTGAAATGTATAAA
CTTTCCAATTTTCACAAAATCTCTTTATATGATAGTTAGATAGTAATATA
GAAG
Run BLAST on NCBI

transcript from alignment at scaffold_245:748470..759799-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054838 ID=TCONS_00054838|Name=TCONS_00054838|organism=Clytia hemisphaerica|type=transcript|length=11330bp|location=Sequence derived from alignment at scaffold_245:748470..759799- (Clytia hemisphaerica)
CTTTGTTTCTCGTGAAGGGAGTCAGGCTCTCAATCATTTTATAAGTTTGA
GGAAGAAACATCTATTTGGAAACTGAAAATTTCAATTTGAAAAAGTTTTG
TAATTTGCTCTCTATTCAGCCTAAGCGCAATGGCCTTTCAGCCTTACGAA
GGTAAACAAAAGACTACGTTTTCAAGGTTTTTAACTTTTCGGAATACCAT
TTTAGGGAGCTAAGATACTTATAATACAGCACAATACGAATCTGCTCAAC
GGTCTGCTTTATTTCTTCTTTTTGTTAGGTTTAAAACCCAACGCTGGTTA
CAAAAGGCGATTTCAAACTTTTGATAAAGAGTGTGATTTTTGATTATTTT
GTTATGACAGGTAACTCTCGCGCTAATTGGAACTCGAACGGAGGAGGGGG
GTCTAAGAGATTCGAATTATAGAAAGCAACTTACGGAAGTATCCCCTCGA
CAGCGGCTGAAATCAGTTTGAATTATTGCTAGATATGAATAATAGAAGTT
CGAATTAGTTAGAACGTTACACGAATGCTTAAACAACGTATACTAATTAG
CTAATCACATTTGTTACAATTATCAATTTTCAGGTCTCCTTGAAGATTCA
ACTATGGTAAGCCAACAGCCGAATGATGCTAAAAGTAAATCTGAAATGCG
CCGTACTCGAATCAAAATGTTGTTTGAAGATTTTCAGGTAAGTTTTTTCA
CGTTTCTTTCAGGATCTCCAATATATCTAATATAATAGTTCAGTATTAAC
TGACACTGGTATAACTTATAAAGCACAATAAAAAGGTCCGCAGCGCGGAT
GCAGAAGTGACAGTGGAGTTTGTACCCTTTTGAGCAAAATAGACTCTTTC
TCTCTTTCTGGAAATTTACCAGCAGGCTGATCTAAATTTTTGATCCATTC
CCCATTCACACTTTTTACAATCATCTCAGCCAGCAATACACCTTTTCTTA
GACTTAAACTACATATTTTGGCGTCGATTAGATACCGTATGATAGAAGTT
CGTCGGGAAATATCTCGTCAATTTTTACCGACGAATAGTGTTGGCCGACG
AATTTTTTACCGATAGGCTACCGTAAACGATAACGAATAAACATCGACAG
CGTTAACGATAAGGTTTGCTGGATTTTTTACAGCATAATTTCAAATTCCG
CGAAGATACGAAAATCCACGTGGGGCAAAATGCCTGAAGATAAATTAAAG
TTTTCTCTACTACCATTCCAGGGTGAGATCGAATATTTGGAGTCAAGAAA
TGACGATTTGATTAACGAAAACAACAAAATCCGGAGTGAAAATGACGAAC
TTCACGAGCAGATCAAAGATTTAGAGTCACGTTATTTGCATTCCTTGAAG
CGATCAGCAAGTGAATTGGAAAGAGGAGGTTTTCAAAATGGTAGCAGTAG
CAATGGTGCAGATAATTTGAACGGTGATATTCACACTATCTTGAAGTTGT
CAAGTAAATTACAAGAAGTAATGAGTATCAATGAAACAATGGCACAAACT
AATTGCAATTTGAAAAACGTAAGTAACCATTCATAAAATCTCCATATCAA
ATAGTAAGGTCCTGTTTTTAGGGGGTTCAAGCGATTATTCCACGATTTAG
CAAATTTAGTCTACTATTAATATTCAAAATATAATTATATGATTCATCTT
TTGAGCTTAAGTGAGGCTCTTATCAAATGCGATATCAAAATACTTCGAAA
AATTTAGAAATTATTTGGAAAAATTAGCCATTATGGATGAAAGAATGCAA
TAAATTTGTGACCGGCCAATGAAAAACTTCCGTTATGCGAATATAGATAT
ATTGTAGCACGTAAACAAACTATGCACGTACAAAATCAAAGTATTTACTT
GATCAGGAAATCTTTGTCCGTTGGTTGAAATATTTATGTGTAAAACGATA
TTAAAAAGCACGTTTGAGGAGACAAAATCTTTCAATTAACCCAGACTGCG
CAGGAAACACATTTGCCGGTAGAGTAGTACAGTATATTTCTTGCGAGAAT
TCTCGGCTAAAAATATTGAAAAGTAAATTAATCAAAATATACCGATTGTT
CAATGAATCCCTCTAGGTAGAAAGGCTAACTGTAAAAATGTGCGTTTACT
AGAAATATAGAGCATTATTAGGTACAATCCAAAGATTCCACTCCCCGGAC
TTAGATTCGAGCACTGAGCTTTGTTTCCCTTGGACCAGGTTTCTGAATTC
CGTCAAAGCAAAACCTCTGATCGGAGTGGAAGCACTATTCAATAGCAGTG
TAAATGCATCGAGAGCGCTAGATCTTCTTTTTCTTGAATACTTTTGAAGA
TGTAGCGTCGTTAGACGTTAAATTTGAACAACATAACGGTTTTTTTTTGC
GGTTACCACTTTCAAAGAAATCCCGACCGAAGATCGTAGATATAGCTTGA
ACCAGGGTATTTAAAGATCAGTGGACTCAACTGACTTTTTCGAAATATGA
CCGCTGATTTTTCCGGGATACTCGGTATAACATTGCAAAGAGTTTTTTAA
AGGTACGGTTAACCTTGTGTTGTGTTTCCGAAGCACATTTCTTAAACTTC
TTTCGAACTTTTTTTCGGGAAGTTGAATTTTAAAAAACAGTGGGAAGGGA
ACACTACATCAGGAGAAGGATGGCCTCGTCTAGGTTGAAATAAGGTGAAT
TTTCCAATAGCCTCCCAGTATGATTATGGGGAAAGTATTTTAAGAACACG
TGAGACACACGGACAAAAGGAAGCCTCTAAGATGACGTCCCCATTGTCTG
ATCAACAAAAGCTTTCTATTTCTTGAGGCCTTCTACTTTTTTTAACCAAT
AAAGAAAAACAAAACCCTTGACCTTCTAACACTGACTTTTCACGCAATTT
TCGACTGTATTTGTCACAGAAAAGTTGAAACGAAGTGTCACTTGACTCTT
AGGGGATCGTGTTTTTTCTTAAACTTTTTTTATAAAACGTCGGTTATCTC
TTTATTGATCTGCACTTTTGACCCTTTTTGTCGAGGCATTGAATTTTGAA
ATCGTACGTGTGTCTGTCAATAGCCTTGATGCCACCAGATGTGGAAAAAG
TAAACTCTTCCCAGGCTTTATAACGTTTTAATCTTTCCACGTCAGACGGC
ATCAAGGCTATCGACATGTACGATTTCAAAATTCAATTCCGAGTAGCCTT
TCATAAAACTTTGATACACCAATCAATCTCTGAATCTTTAAAGCTAAATG
GGAAGGTGGTTACCCCGGCCGACCACTGCCCTTTAAATCTTTGATCGGAT
TATTTTTTTAAAGTGGTAACCACAAAGAAGTGACTGCAGTATTAAAATTT
TGTCTAACGTCCAACTGCGCTGCATCAAAAAGAATGAAGGAAAAGTAGAG
CTAGCACTCTCGATGTATTGAGTAAGGCTACCATTAGGTAACACTTTCAA
AAAAACTCCAATCAAAATATTTTGTTTAGCAGGAATGAGAAATTGATGTC
TCCATAGTTTATATAAAGCTCAGTGGAGGGGGTTGGGTTCGAGTTCATAA
TGGTTGAATAGCGTTAAATAGTTATGAAAATTCCACCCTTGAATATCCAA
AACATTTGAAGTCATTTGATGGAATACAATTCTCTTGTGGTGTAATGGCG
GACGTTAGGTTTGAAGGTGTTTGGCAAACAACATGAATATATGAAAATCA
AGAATGAGTTTCTTATACTAAAAAAATACTTAAAATTCTACTAAAAGATC
TGATTTTTATTTGTCACTTGCATCATCTAAAGGTCAATGACAAGTTACGT
GGGGTGGCAGAAACTTCACTATGTTGATTTAAAAAGAATTCACGTGGTGA
GAAAGTCTCAGTCCAATAAATAAATGAACACCAAAAGTTTACATTAAAGA
AAAATTAAATCAAACTGAACTACTAAATTGAATTAAACTCCGCTTCCTTG
GCCGCCCTTAAAGGTACCCTTTTTGGATTTCCAAAGTCCCGCCGTTAAGG
GTCGGAAAAATCAGAAAATCAAATTTCAGTTCCACTAAGGGTCGGAGAAA
TTAGAAAATTTAAACTTTTCGAAATTTGGTCGAAATTGGTCAAGTTTGTC
CCAATAAGATTCACAAGATTTGCTTTTGTTTTCTCCTTTTTAGTCTCGGT
AAGGGTCCAAGGGTTGAAAGTCGGGCGGCACCCCGCCGTCAGCTCGCAAC
CCTAGTACCTCCCCCTGGGGTTAAATCATACTTCATTTTCAACTAACATC
TTATTTAGTGGTTTAAATACTCTAGAGTTTTGATAAAGATTTTAAAATCT
TTGCACGTAAAGTGTCTACTAAAACTTTTTAAGTCTATAGTTAATTGTAA
GTCTACATATCTTTAGGCTGTTAAAACACCTCCTCCCTCCCACTGGGAAA
ATATACTCCAATTTTAGCCCCCGTTAAAAAAATCCTCACTGCTTAATATT
GTGTAATTTTCCATCCCCACTGAATTTTCAGACTTGAAAACAATTGAACT
CAAATTCCCAGTCACGAAATTATGAAAATTTCAACCCCCATCGAGTTTAA
GTTCGTTATTTTTATCCCCCCATGCAGTGGCGTGGTGGGAAAATTTCTCT
GGGGTGNTAAAGTTTTGGTGGACACAAAGTGACGTAACATCATACATTTG
CTTTTGAAAACCAATGCGTAAATCGAGTATTATAAAATGTAAATCGGTAA
CACTCTGAGATTGGAGACAATAGAAAAGGTCATCTCACGATAAAACACGA
AACGATACCTTAAACGTTTGAAATTAACATTGAATTCTTATCCAAATTTA
GATCCTATGTGTATAACATTTTGACCTTGATTTGTCAAAGGAGAAAAAAG
CCAGTTACTTTGTGCAAATAAATTGTATTGATAAATAAGTCCCTTTCTTC
GAATATTTCTGACGTAAACTTAACTGCTCTTTCGCTAAATTTGGAACTCC
TACCTAGTCAATTGGTCCACTTTTTTACGATATCTGCCACGTAACATTAA
GAAAGTACAGGCAAAATCAAAAAGTAATGAGATTGCTTTGGGGACAAGAT
TAGCAAAAATGTAAAAGTAATTTATTCGGAAAATTTATAGAAATCTTTTT
TTTTCGGTTTTTTATTAGGACATCAAGTGTCTGCGTCAAGAGAAGCAACA
AAACTTAGATGAAATCAAAATTCTGAAGGAACAACAAAAATTGATCGACT
CTCCTCAAAGGTAAGGACCAATGAAAGATAGCGATAGCGATTACTATCCA
TAACCTTAAATTTATACTGAAAAGGAAATATATTGTTAAAACCACTAGTT
GTCAAATCAGGTATATGTAATAGCGAAGCTGGATGATGGACGACAATTCC
TTAGCGGATTGCTTCTTTGTACACATAATAGAAATCCATCTCTGTACCCT
TGAGTGTTCTGTTTTTATAAGAAAAATGAAGCAGACAAAGTATTCACGCA
GACGTTTTTTCGCCAAAGATTATTTTGAAATCCACTGATTTTCTTTTACC
CCTCCCCAGGTACAACAAATACACTGTGGTAGCTCTCCAAACCAAAGCAG
ATGGCTATGAACGTGAAATCAAACATTTGAAAAAAGCTTTAAAACGATCA
GACGAATATATTGAAAAACTAACCACTGAAATTGAGACGTACAAACGAAG
CAGCAGTACACAAAAATCACCAAATTACCCAGCCTCTAAAGTGTCTGACG
ATAGAAATGTGTTCGGGACACAAGCTAATGATATGAATAATAGACTAAAG
TTGTATGGTGGTGTTACAAACAGTTTTAGTAAGACCATGTCGAGTGCAAG
TGCAACTTTACAGAGTCTTGTAAGACACAATGAACAAGGGATGAATGATG
ATCAGTCAATGTCAAAAATCTGGAATCCAACTCAACCGTCACCGAAAAAC
TCTTTAATTACAGAAAATATTGAAAACTCAAAGAAATTTGAAATGCTAGA
GACCAACCCCAAACAAGATCAAGCTCTTATATCCAACCCGTCTCGTTTTC
CAGCATGTGCGAAATTATTGGAGCTTTCCAAACAACATGACATTACACCT
GATAAAAATGGAACACCATCTCCTTCCTCTAGAAGTGACCCTGAACAGAA
AAATCAGCCAACCAGCACAGTAGGAAATTCAAGTAGACATTCTTCAACAC
CTGTTTCACCTAGTCGTAGCCCAGTAGTCAACTATTCTTCGTCTGGCAGA
ACAGAAAACTTCTCTTCACCTCATAACAATGGATCACCGAATCAACAAAT
TTATCAACGCGAAAACGAGGCTGACGAAATAACCATAGTGATGCCATCAA
CAGAGAGCCCGTCGCATTGGTTACAATCTACAAATCAACATGGTGGACGG
AGCAGTGCAGAGAGACATATGAATAGTGAAGAAAGATCATCTTCATCCGC
TTGGCATCAACCTTCTAGATACAATAATAAGACTAATGGAAGTCGAATAG
GTTTTGATGCAAGTATGATTTCTTCCAAAGAAAGAGGACTTTTTTCACCA
GCAAAGAAAATCAAAACTGAAGTATGCTACGAATGATATCAAAAAATTGG
AATTTCATGGNGCTTTAAAACGATCAGACGAATATATTGAAAAACTAACC
ACTGAAATTGAGACGTACAAACGAAGCAGCAGTACACAAAAATCACCAAA
TTATCCGGCCTCTAAAGTGTCTGACGATAGAAATGTGTTCGGGACACAAG
CTAATGATATGAATAATAGACTAAAGTTGTATGGTGGTGTTACAAACAGT
TTTGGTAAGACCATGTCGAGTGCAAGTGCAACTTTACAGAGTCTTGTAAG
ACACAATGAACAAGGGATGAATGACGATCAATCAATGTCAAAAATCTGGA
ATCCAACTCAACCGTCACCGAAAAACTCTTTAATTACAGAAAATATTGAA
AACTCAAAGAAATTTGAAATGCTAGAGACCAACCCCAAACAAGATCAAGC
TCTTATATCCAACCCGTCTCGTTTTCCAGCATGTGCGAAATTATTGGAGC
TTTCCAAACAACATGACATTACACCTGATAAAAATGGAACACCATCTCCT
TCCTCTAGAAGTGACCCTGAACAGAAAAATCAGCCAACCAGCACAGTAGG
AAATTCAAGTAGACATTCTTCAACACCTGTTTCACCTAGTCGTAGCCCAG
TAGTCAACTATCCTTCGTCTGGCAGAACAGAAAACTTCTCTTCACCTCAT
AACAATGGATCACCGAATCAACAAATTTATCAACGCGAAAACGAGGCTGA
CGAAATAACCATAGTGATGCCATCAACAGAGAGCCCGTCGCATTGGTTAC
AATCTACAAATCAACATGGTGGACGGAGCAGTGCAGAGAGACATATGAAT
AGTGAAGAAAGATCATCTTCATCCGCTTGGCATCAACCTTCTAGATACAA
TAATAAGACTAATGGAAGTCGAATAGGTTTTGATGCAAGTATGATTTCTT
CCAAAGAAAGAGGACTTTTTTCACCAGCAAAGAAAATCAAAACTGAAGTA
TGCTACGAATGATATCAAAAAATTGGAATTTCATGGAAACTTTTTTTTGA
CCCCGTGTATATCAGAACCTTGTTAATACTTTATCGACTTTGAAATGTAT
AAACTTTCCAATTTTCACAAAATCTCTTTATATGATAGTTAGATAGTAAT
ATAGAAGATAATGTAATGTATAAAATAAGTGAACGTGAGAAATTTTAACC
TATCAAGGGCACAAAAATCTAGACTTTAAAAAATCAACCTCTTAGCTGTA
TAAGAAAAACATTTGCAATGTTTGATTTGGTTTACAATGTTTTTAGTAGT
TAATGCCATTAATGAGAATAAAATTGGTCAAAATTAAAAACAACCTGCAA
AATACCTGTAAAATAAACAAAGCTTCTTGTTTGGAAACTCTAAAAATAAC
CAAACGCAGTCATTATAAAAATTAAACATGAACAACCTGAATTTTCGAAT
TCNTCCTTCCTCTAGAAGTGACCCTGAACAGAAAAATCAGCCAACCAGCA
CAGTAGGAAATTCAAGTAGACATTCTTCAACACCTGTTTCACCTATTCGT
AGCCCAGTAGTCAACTATCCTTCGTCTGGCAGAACAGAAAACTTCTCTTC
ACCTCATAACAATGGATCACCGAATCAACAAATTTATCAACGCGAAAACG
AGGCTGACGAAATAACCATAGTGATGCCATCAACAGAGAGCCCGTCGCAT
TGGTTACAATCTACAAATCAACATGGTGGACGGAGCAGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTAAAGTTTTGGTGGACACAAAGTGACGTAACATCATACATTTGC
TTTTGAAAACCAATGCGTAAATCGAGTATTATAAAATGTAAATCGGTAAC
ACTCTGAGATTGGAGACAATAGAAAAGGTCATCTCACGATAAAACACGAA
ACGATACCTTAAACGTTTGAAATTAACATTGAATTCTTATCCAAATTTAG
ATCCTATGTGTATAACATTTTGACCTTGATTTGTCAAAGGAGAAAAAAGC
CAGTTACTTTGTGCAAATAAATTGTATTGATAAATAAGTCCCTTTCTTCG
AATATTTCTGACGTAAACTTAACTGCTCTTTCGCTAAATTTGGAACTCCT
ACCTAGTCAATTGGTCCACTTTTTTACGATATCTGCCACGTAACATTAAG
AAAGTACAGGCAAAATCAAAAAGTAATGAGATTGCTTTGGGGACAAGATT
AGCAAAAATGTAAAAGTAATTTATTCGGAAAATTTATAGAAATCTTTTTT
TTTCGGTTTTTTATTAGGACATCAAGTGTCTGCGTCAAGAGAAGCAACAA
AACTTAGATGAAATCAAAATTCTGAAGGAACAACAAAAATTGATCGACTC
TCCTCAAAGGTAAGGACCAATGAAAGATAGCGATAGCGATTACTATCCAT
AACCTTAAATTTATACTGAAAAGGAAATATATTGTTAAAACCACTAGTTG
TCAAATCAGGTATATGTAATAGCGAAGCTGGATGATGGACGACAATTCCT
TAGCGGATTGCTTCTTTGTACACATAATAGAAATCCATCTCTGTACCCTT
GAGTGTTCTGTTTTTATAAGAAAAATGAAGCAGACAAAGTATTCACGCAG
ACGTTTTTTCGCCAAAGATTATTTTGAAATCCACTGATTTTCTTTCACCC
CTCCCCAGGTACAACAAATACACTGTGGTAGCTCTCCAAACCAAAGCAGA
TGGCTATGAACGTGAAATCAAACATTTGAAAAAAGCTTTAAAACGATCAG
ACGAATATATTGAAAAACTAACCACTGAAATTGAGACGTACAAACGAAGC
AGCAGTACACAAAAATCACCAAATTACCCAGCCTCTAAAGTGTCTGACGA
TAGAAATGTGTTCGGGACACAAGCTAATGATATGAATAATAGACTAAAGT
TGTATGGTGGTGTTACAAACAGTTTTAGTAAGACCATGTCGAGTGCAAGT
GCAACTTTACAGAGTCTTGTAAGACACAATGAACAAGGGATGAATGATGA
TCAGTCAATGTCAAAAATCTGGAATCCAACTCAACCGTCACCGAAAAACT
CTTTAATTACAGAAAATATTGAAAACTCAAAGAAATTTGAAATGCTAGAG
ACCAACCCCAAACAAGATCAAGCTCTTATATCCAACCCGTCTCGTTTTCC
AGCATGTGCGAAATTATTGGAGCTTTCCAAACAACATGACATTACACCTG
ATAAAAATGGAACACCATCTCCTTCCTCTAGAAGTGACCCTGAACAGAAA
AATCAGCCAACCAGCACAGTAGGAAATTCAAGTAGACATTCTTCAACACC
TGTTTCACCTAGTCGTAGCCCAGTAGTCAACTATTCTTCGTCTGGCAGAA
CAGAAAACTTCTCTTCACCTCATAACAATGGATCACCGAATCAACAAATT
TATCAACGCGAAAACGAGGCTGACGAAATAACCATAGTGATGCCATCAAC
AGAGAGCGCGTCGCATTGGTTACAATCTACAAATCAACATGGTGGACGGA
GCAGCGCAGAAAGACATGTGAATAGTGAAGAAAGATCGTCTTCACCCGCT
TGGCATCAACCTTCTAGATACAATAATAAGACTAATGGAAGTCGAATAGG
TTTTGATGCAAGTATGCTTTCTTCCAAAGAAAGAGGACTGTTTTCACCAG
CAAAGAAAATCAAAACTGAAGTATGTTACGAATGATATCAAAAAATTGGA
ATTTCATGAAAACTTTTTTTTGACCCCGTGTATATCAGAACCTTGTTAAT
ACTTTATCGACTTTGAAATGTATAAACTTTCCAATTTTCACAAAATCTCT
TTATATGATAGTTAGATAGTAATATAGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034544XLOC_034544Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054838-exon-scaffold_245-1575043694:759649..759799TCONS_00054838-exon-scaffold_245-1575043694:759649..759799Clytia hemisphaericaexon
TCONS_00054838-exon-scaffold_245-1575043694:759113..759216TCONS_00054838-exon-scaffold_245-1575043694:759113..759216Clytia hemisphaericaexon
TCONS_00054838-exon-scaffold_245-1575043694:758282..758666TCONS_00054838-exon-scaffold_245-1575043694:758282..758666Clytia hemisphaericaexon
TCONS_00054838-exon-scaffold_245-1575043694:749941..750032TCONS_00054838-exon-scaffold_245-1575043694:749941..750032Clytia hemisphaericaexon
TCONS_00054838-exon-scaffold_245-1575043694:748470..749641TCONS_00054838-exon-scaffold_245-1575043694:748470..749641Clytia hemisphaericaexon
TCONS_00054838-exon-scaffold_245-1510915933:759649..759799TCONS_00054838-exon-scaffold_245-1510915933:759649..759799Clytia hemisphaericaexon
TCONS_00054838-exon-scaffold_245-1510915933:759113..759216TCONS_00054838-exon-scaffold_245-1510915933:759113..759216Clytia hemisphaericaexon
TCONS_00054838-exon-scaffold_245-1510915933:758282..758666TCONS_00054838-exon-scaffold_245-1510915933:758282..758666Clytia hemisphaericaexon
TCONS_00054838-exon-scaffold_245-1510915933:749941..750032TCONS_00054838-exon-scaffold_245-1510915933:749941..750032Clytia hemisphaericaexon
TCONS_00054838-exon-scaffold_245-1510915933:748470..749641TCONS_00054838-exon-scaffold_245-1510915933:748470..749641Clytia hemisphaericaexon
TCONS_00054838-exon-scaffold_245-1491911889:759649..759799TCONS_00054838-exon-scaffold_245-1491911889:759649..759799Clytia hemisphaericaexon
TCONS_00054838-exon-scaffold_245-1491911889:759113..759216TCONS_00054838-exon-scaffold_245-1491911889:759113..759216Clytia hemisphaericaexon
TCONS_00054838-exon-scaffold_245-1491911889:758282..758666TCONS_00054838-exon-scaffold_245-1491911889:758282..758666Clytia hemisphaericaexon
TCONS_00054838-exon-scaffold_245-1491911889:749941..750032TCONS_00054838-exon-scaffold_245-1491911889:749941..750032Clytia hemisphaericaexon
TCONS_00054838-exon-scaffold_245-1491911889:748470..749641TCONS_00054838-exon-scaffold_245-1491911889:748470..749641Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_245supercontigscaffold_245:748470..759799 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0.123466	0	0	0	1.37515	0	0	0	0	2.18817	0	0	2.40446	2.69573	1.24488	0.896665	3.18434	4.18377	0.247245	0	0.0111757	1.72941
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054838 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top