TCONS_00055180 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055180
Unique NameTCONS_00055180
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1244

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055180 ID=TCONS_00055180|Name=TCONS_00055180|organism=Clytia hemisphaerica|type=transcript|length=1244bp
tttcagtgataaaatatttttcaaaacaaatataaCTTATTTATATTGAA
AGAAGTGTAAATCATGGCAGTCCGTGCACGGTATGAAAACAGTAATGAAA
TTGGTGTTTATTCCAAACTGACAAACACATATTGTATGGTTGGGGTTGGC
GCATCACAGAATTTCTACAGTGTTTTTGAAGGGGAATTGGATGATGTCAT
TCCAGTCTTTCAAGCTTCTGTATCAGACTCTGCTATCGTAGGGCGCCTGA
CAGCTGgCAATCGTCATGGTCTCCTTGTACCAAGTACTACAACAGATCAA
gaaCTTCAACATATTCGAAACTCTCTACCTGACGGTGTGAAACTACAACG
CGTGGAGGAACGTCTTTCAGCGTTGGGGAATGTTGTTGCATGTAATGACT
ACGTCGCACTCGTTCATCCCGACCTCGACAGGGAAACTGAAGAGATTTTA
GCAGACACACTAAAAGTAGAAGTATTCCGTCAAACGATAGCAGAAAATTC
ACTGGTTGGAACTTATTGTAGTATTAGCAATCAAGGTGGCCTGGTACATC
CAAAAACGTCCATCGAAAATCAAGATGAAATATCTTCATTATTACAAATT
CCTTTAgttGCGGGTACAGTGAACCGAGGTAGTGAGGTGATCGGAGCCGG
TATGATAGTCAACGATTGGTGTTCGTTCTGTGGTTTGGATACAACTAGTA
CTGAGTTATCTGTCATCGAAAGTATCTTCAAGTTAGGCGATGCTCAACAA
TCGGCCATCACAACAACTATGAGAGCTGCCCTTATTGAGTCcaTGACGTA
AACGGCGTGGACGAACAATGCGAAGGTTCGGTTGGGAATGGATGTATATA
AAGAAAGGTGATTTGGGTATACAAACGTATAAAAATATATACTCTTAACA
CTCATAGTTATTCCAACCACCCCTTGTTTAACGACCAGAGTGTACCCTTC
AAAATCTAAATCCAATTCCCGATTTTAATCGATATATGATCCATAGCTAA
GcgattttctttagattttgtATTCATTTTAGCCTAATTGTACCAGGGAA
GTCAAATTATTTCTAATAACCGGGAAGGTCGGACTTTACAGGAACACCCA
AATCACAAAGTTGATGTATAAATTTGCTGAGCGGCAGAGAGAATTTTTCT
CGTGAGTTTTATAGGTTTAATTTGGTGAGGTGACATtttgttattgattt
ttttacGAAATTATTGTAGCTTTTTTGCAAACAATAAACGAGAT
Run BLAST on NCBI

transcript from alignment at scaffold_251:581490..592051+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055180 ID=TCONS_00055180|Name=TCONS_00055180|organism=Clytia hemisphaerica|type=transcript|length=10562bp|location=Sequence derived from alignment at scaffold_251:581490..592051+ (Clytia hemisphaerica)
tttcagtgataaaatatttttcaaaacaaatataaCTTATTTATATTGAA AGAAGTGTAAATCATGGCAGTCCGTGCACGGTATGAAAACAGTAATGAAA TTGGTGTTTATTCCAAACTGACAAACACATATTGTATGGTTGGGGTTGGC GCATCACAGAATTTCTACAGGTGAGTAGTGTTTTTCACCTGTATTTTATA TCTTTTAATGTGGGAACTAATGTTTGCGAAAACCTATTTCATGAGACtag tttttttgttcattcagGTATAGCTCAAAGATAGTTAAAAATTTCTCAGT ATCCAATTTTGATATATGCAAAGTTTAAATgcctaaagtctgtccagata taattggcagtggaaacaagaatgcctgtaacttttgatagtcaaatata attatggaaattttttttgcttgttttagagaaNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtt tgccttgaaatttaacaaacttcttaacctaaggttgaactaccactggt gtaaaaatgaatgtaatagcataagtagaaaaaaagctcaatttttacac tcgcaaattaaaccgctaaaaatcgcgaatttttcaaccaaaaatacatt caaatatagcgcttttgattctctaaaacaagcaaaaaaaatttccataa ttatatttgactaccaaaagttacaggcattcttgtttccactgccaatt atatctggacagactttagttattCTGTTTGTTTGaacattaaaatttaa aaagtttcatctttcattcttaaaatttaaaaagtttcatcTTTCATTCT ATAGTGTTTTTGAAGGGGAATTGGATGATGTCATTCCAGTCTTTCAAGCT TCTGTATCAGACTCTGCTATCGTAGGGCGCCTGACAGCTGGTTAGTGATT TACTAacttatttttttagttttctgcATACAGTATATTATTCACGTTTG GATAAAGGAACTTCCATGTACTGAAGATTTTGAACAAAATACTTTGATCA ACCAGGGACGTGGGTGCTACcacagggtactaacccatagggtaaCCCTG AATTTCAGCAGGAATATTTGTCTTATATAATCACCACCTCTTTTTTCAAT ACCCGGTACTAGCTTTTTTGAGAACAAAAAGGATTCATCTTTAGTGCCAG GTAATCTCTACTTTTGGGACCCCCGCAAATTTTTTTCGTTCGCGGACGCA AACCTGATTTAGCGGTCAAAGACCTAAATTAACGGTCaaagacctgaatt aacggtcaaagacctgaattaacggtcaaagacctgaattaacggtCAAA GACCTGAATTACTGGTCAaagacctgatttagcggccAAAGACCTTAatc aacggccgaagacctgatttagcggccgAAGATCTGAATTAACGGTCAAA GACCTGAATCAACGGCTGAAAACCTGATTTAACGAccgaagacctgattt agcgATTCACCGGCCGAATACCTGATAGATAAGTTAGGGTCAGTTAAACT AGCTTGAACCATTCGGCAAGGCATCAGGTGCTATGGTCCAGTGGTTAGTG CAGTGGTATTGGAGACGAAAGATGAGTAGTTCGAGACCAGTTATTGGcat taattttcattatttttagtttaaaatcttttaacttaatttgttttcaa tactATTTCCCATTGaaacgtcataaaaaaatcttgaatgaatttataaa aaagctttataaCAAATTTCCACAATTCATTTTCTCCGGGTCTTTGgccg ttaaaaaaaaattccaccacTGCATCAAGTCTTCGGTTTTCAATTCATGT CTTcggccgctaaatcaggtctgcggccgctaaatcaggtctgcgACCGC TAATTCAGGTCTGCGGCCGCTAATTCACGTCTGCGTCTGCtgacagaaaa aaaatctgcggGACCCCCATCCCCTATTAAGAAGCCGGTTATCAAGAATA ATAAGGGTACAGTACATAATACCTATTAATATTTTGAGACCCAAATTAGA CACCACTTCCTGGCTATGGGTAAGTACCCAGCAGCTTTGTACCCTTTATC GACTGGTGATTCCAGGATTTAGATCGGCAATTCATATTCCTTGATTAGGT AATTCAAGATTTTCTACCTtattgaaaacttaaaaaatattcttcttgat ttttttgcaggCAATCGTCATGGTCTCCTTGTACCAAGTACTACAACAGA TCAAGTATGAaacttttatctttatttttcaacaacTTCTACGTTTATTC TGCGTGCTCTAAGTTCTCATTAGAGAcaaatggtttgttttaaaTATCTA TACTAACTCTAGTTAATaataagggctacatacactacacaatatattgc tgaatgcgggcaatatattgaaaaggtgtccgcaatatattgtcagctag atttgcaatattccaacaatatagggggattgtttacaaaatgaaaattc ctttttataataacccgttacggtccgaaaactaaattgtcgaatattgc tcaccaatatattgtgtacatgtttttttttataagcaagtgtatgcccc ttggtcaggctcgtgtatgcttaagttctcaaagtatccaggcatagttt atgcttattatatgcttNNNNNNNNNNNNNNNNagtttatgcttattata tgcttaagaatcatgcttatgattcaccccaagccaagtttttaatgaaa tttcagaaattttgtaaaaatttgttcagattttaggagcagtggaatgt agctaaccgtggaatgtcttatttttacttgacctctaccaaaccttttt aaacagataaaaacgaccacttgaaaaatatttcaggctgacataaTATG CTCATgtgaattctgcaaatctgagccttcatatgcttattagcgttttg cttataaaaaaaacatgtagtctaagtagccctatACTAATTGCAGTGTC AAGATGAACTACAATAAATTTTCATGCAATTCTCTTTAAACTGCATTCAG CCCAACTTTCAACTGTAATCGACAGACTGATACTTTCCATTTTTAAGGAG TTAAAATGGACTCCACTTCTTTCAGATATCTTGCCATTATGacttatttt cagatttttgataACTTCGAAAAACCCCTGTAAACGAACATTGTATCGTA GAACGCGTATTTTACGGTCACTTTTTTGACCTACcaggaggtcctatgaa ttcaCCTTTATTCGGTTCGTTCGTTCGTCACCAGCGACAATTTccctgaa aaagatttttagggattttctcgagctctcattagtttttctgacgtttt gtttattttaaatttaatgttttctgtTGATCagccaggtaggtccatca aagtattactttttttctttttcaggaaCTTCAACATATTCGAAACTCTC TACCTGACGGTGTGAAACTACAACGCGTGGAGGAACGTCTTTCAGCGTTG GGGAATGTTGTTGCATGTAATGACTACGTCGCACTCGTTCATCCCGACCT CGACAGGGTAAGGATCAAATTCGTATGCTAGAAAAAATGCGTGTTTCTGC TGTTATAGCTATATAGGAACAGATGAAGTTGagtttttcgaagtttttaC TCAATTTTATTGATATATTCTTATTGTTTTTTGATGAATatgttttgtta aaaaaactttaaattattGCTTTTTGTACAGGACACTGAAGAGAATTTAg gtttcgcgaaaataagtacccgcaaaattttgtaacacgcgaaatttaat accattAAGGTATTAGGCACTTGAGAGTAACATTTTAAATCATCCATCGG CTATTGTTTTTAAACAGGAAACTGAAGAGATTTTAGCAGACACACTAAAA GTAGAAGTATTCCGTCAAACGATAGCAGAAAATTCACTGGTTGGAACTTA TTGTAGTATTAGCAATCAAGGTGGCCTGGTAGGTTGAATATATGTCGTGT TTTTGCAAGCGAATTTTCAAAGATGAATACAGAAACCAATTGTTTCATCT TCTCCACAactcatagtgtgcagaggggtctgaacccccccattaatatt tcatccccccctataaaggtatcccccctatttttaaaattttttgatcc cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccctataaagcctt ccttgaaaaTTCGGatcccccccttaaaaaaggggggggttcATACTATG CAACTGTTTCATGGTTTCTCCCAAGTTTCCTAAACACCCCAAGTTTCTGA GACTAAATTAGTTTATTGTTCTACGGGTCTGATGGACCTAAAATCAAAac ccaaaatcgaaaaaataataatattgactTGACAAAGCTGAAGGGGAGTG ACTTTATAAGTTTATCTCCAGATATTGTTTCTAACTGAACAAGCTGAAAA AGTGTAAATTCATTCCATAACTTAGATCGCTtagatgaatttaaaacatC ACAAGGGAAATGACACGAAAGTGGCTCATCGATAAAGAGTGAAAAGTCTA CTGCTTCAAAACGTCACAACTTTTTTAGATCTTATGACCTTCCGAcccta aatttgaaaaaattatttttaccaaCCGAccaacaatatttttctgaaag tctTCCCGTAGAACGATGAATTAAATTTGTCTCGCCTAAACATACCAAAA CTACTTTGAGCTATAAACTAGGAAGAACTTTAGAGAAAAACCAGCATAAA CgaaattgtttcaaaatacTTCCATTTTAAAGAACCGTAACTAATTGACT TCCAGCTGATTAGTGGTCATTCTTAACCTCCACCCATccacggaaatacc ccggttttagccaggagtggcaaatttaaactagacaaaagttgtataaa atttgtcactactggcaaaaaccggggtctttccgtagaaagcattacgt catgaatatcataaatACTATCCGTTACTTTAGCAGTTGTTTGTTTTAAA ATGCTCACTAAAACCCTTCTCATTTCTATACACTTCAGGTACATCCAAAA ACGTCCATCGAAAATCAAGATGAAATATCTTCATTATTACAAATTCCTTT AgttgtgagttttttttttgttttttttttttgctttaattgCTACTATT TCACTAGTTTCGCTGGAAAGATCgctgtctgtacacaaacccagtatcta cggcttatttcaaaattcattgccgtagagggtctgttgtcattgtcttt tctcatttgagatttttcaaaccgaccgctgcgatggagtgttggtgaga gaggggagacgatgagagaaacgttgctatttataaatcatacttcatcg cagaggtctccgtacgggaattctTTTAttaaacagacaatgcgcacaga gtgtactacaaagcgataaacgtgatatacactctggtacagagtagaaA GATCGTCGACTCGTTTAATTTTAATTCCAttggtaaaaaataaataattt ttgtagACCAAtacaatagatcttatcggagtttttgattttttttttta aagcgatgcattgtgggattgtttcgggtgTATTACAATAATAGAGTTCC CTCGAAGAATTCCtgagagatttctattgtaatacccccgaaacaatccc acaatgcatcgctttaaaaaaaaatcaaaaaccgataagatctattaaaA AAGGTCAGTACAATTAGGTTCATTTTCatttaacaatattttgaatgttC CTTCAACCTTTTTTCTTCATAGGCGGGTACAGTGAACCGAGGTAGTGAGG TGATCGGAGCCGGTATGATAGTCAACGATTGGTGTTCGTTCTGTGGTTTG GATACAACTAGTACTGAGTTATCTGTCATCGAAAGTATCTTCAAGTTAGG CGATGCTCAACAATCGGCCATCACAACAACTATGAGAGCTGCCCTTATTG AGTCGtaagtattattattattgtatgATTTTCCTAAACCCTTACAGAGC ATTCTATGGGAAGTGTCAACCTCGAGGGAAACCAGTAGGTAAATTAAGAC CTAGGGTCAGGTAAATTTTATTTGGTAATTGAACTTAAAAAGAACACGTT GGACTTTGACTTTCTTCCCGGAAGATAAGTCTCAATTTGTCCAAAGCATT CATAGGAAAACCTATGTATGACGTTATGCTTTCTAAAGGAAACACCTCAC ACGTAAATAGTAGCAAAAAACAGGCGGCCGAAAAAAACACGAGAAAAAAA TCCGGGGGGACTAAAAGGTAGAGGAAATTAGAGgaattgttttcaatttt tcagtaGGAGGCCTACAAGGACACTATGGTCAAATTTCCCAGTCTCGTAA TAGTTTCGAGATAACGTAACGGGTAGCATAAGAAGTAACTAAGGAGctta ttattttatttcattatatcattttctttattttagcaTGACGTAAACGG CGTGGACGAACAATGCGAAGGTTCGGTTGGGANTTCTTTTAttaaacaga caatgcgcacagagtgtactacaaagcgataaacgtgagatacactctgg tacagagtagaaAGATCGTCGACTCGTTTAATTTTAATTCCAttggtaaa aaataaataatttttgtagACCAAtacaatagatcttatcggagtttttg atttttttttttaaagcgatgcattgtgggattgtttcgggtgTATTACA ATAATAGAGTTCCCTCGAAGAATTCCtgagagatttctattgtaataccc ccgaaacaatcccacaatgcatcgctttaaaaaaaaatcaaaaaccgata agatctattaaaAAAGGTCAGTACAATTAGGTTCATTTTCatttaacaat attttgaatgttCCTTCAACCTTTTTTCTTCATAGGCGGGTACAGTGAAC CGAGGTAGTGAGGTGATCGGAGCCGGTATGATAGTCAACGATTGGTGTTC GTTCTGTGGTTTGGATACAACTAGTACTGAGTTATCTGTCATCGAAAGTA TCTTCAAGTTAGGCGATGCTCAACAATCGGCCATCACAACAACTATGAGA GCTGCCCTTATTGAGTCGtaagtattattattattgtatgATTTTCCTAA ACCCTTACAGAGCATTCTATGGGAAGTGTCAACCTCGAGGGAAACCAGTA GGTAAATTAAGACCTAGGGTCAGGTAGATTTTATTTGGTAATTGAACTTA AAAAGAACACGTTGGACTTTGACTTTCTTCCCGGAAGATAAGTCTCAATT TGTCCAAAGCATTCGCAGGAAAACCTATTTATGACGTGATGCTTTCTACA TGAAACACCCCACACGTAAGTAATAGCAAACAAACACGAATTTTCAGGGG gaacaaaattcttttttgaaatattaggGGGGACTTTCAGGAGGACGCTA TGGCTATGGCTATGGCCAAACTTCCCAGTCTCGTAATAGTTTCGAGATAA CATAACGGGTTGCGTAAGAAGTAACCAAGGAGcttattattttatttcat tatatcattttctttattttagcaTGACGTAAACGGCGTGGACGAACAAT GCGAAGGTTCGGTTGGGAATGGATGTATATAAAGAAAGGTGATTTGGGTA TACAAACGTATAAAAATATATACTCTTAACACTCATAGTTATTCCAACCA CCCCTTGTTTAACGACCAGAGTGTACCCTTCAAAATCTAAATCCAATTCC CGATTTTAATCGATATATGATCCATAGCTAAGcgattttctttagatttt gtATTCATTTTAGCCTAATTGTACCAGGGAAGTCAAATTATTTCTAATAA CCGGGAAGGTCGGACTTTACAGGAACACCCAAATCACAAAGTTGATGTAT AAATTTGCTGAGCGGCAGAGAGAATTTTTCTCGTGAGTTTTATAGGTTTA ATTTGGTGAGGTGACATtttgttattgatttttttacGAAATTATTGTAG CTTTTTTGCAAACAATAAACGAGATCTATatacaaattataaaaaaaata cttttttctttcttctctaTATCTTGTCAGCATTTTAAAGCAATTAGTAG CCTCGTGTTAGTATTGGTATCTTTTTGGTGACTACACGTTTTTCGTTTTA TTAGAAcacagtttataagaacattgaggctgaaattcgtcgaaaaatta agaacatgcccagcctcagtttgaaaaaaaataagaaactacaatttttt cctattttcaagcagttagggatggattttctaaaatcaagagtcaaata ttggccaaattttacgaattttaagtgctctttattttgcatgatgttGT CTATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNAAGGAGcttattattttatttcattatatcattttct ttattttagcaTGACGTAAACGGCGTGGACGAACAATGCGAAGGTTCGGT TGGGAATGGATGTATATAAAGAAAGGTGATTTGGGTATACAAACGTATAA AAATATATACTCTTAACACTCATAGTTATTCCAACCACCCCTTGTTTAAC GACCAGAGTGTACCCTTCAAAATCTAAATCCAATTCCCGATTTTAATCGA TATATGATCCATAGCTAAGcgattttctttagattttgtATTCATTTTAG CCTAATTGTACCAGGGAAGTCAAATTATTTCTAATAACCGGGAAGGTCGG ACTTTACAGGAACACCCAAATCACAAAGTTGATGTATAAATTTGCTGAGC GGCAGAGAGAATTTTTCTCGTGAGTTTTATAGGTTTAATTTGGTGAGGTG ACATtttgttattgatttttttacGAAATTATTGTAGCTTTTTTGCAAAC AATAAACGAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034756XLOC_034756Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055180-exon-scaffold_251-1491911889:581490..581659TCONS_00055180-exon-scaffold_251-1491911889:581490..581659Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1510915933:581490..581659TCONS_00055180-exon-scaffold_251-1510915933:581490..581659Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1575043694:581490..581659TCONS_00055180-exon-scaffold_251-1575043694:581490..581659Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1491911889:583094..583179TCONS_00055180-exon-scaffold_251-1491911889:583094..583179Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1510915933:583094..583179TCONS_00055180-exon-scaffold_251-1510915933:583094..583179Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1575043694:583094..583179TCONS_00055180-exon-scaffold_251-1575043694:583094..583179Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1491911889:584450..584493TCONS_00055180-exon-scaffold_251-1491911889:584450..584493Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1510915933:584450..584493TCONS_00055180-exon-scaffold_251-1510915933:584450..584493Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1575043694:584450..584493TCONS_00055180-exon-scaffold_251-1575043694:584450..584493Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1491911889:585665..585796TCONS_00055180-exon-scaffold_251-1491911889:585665..585796Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1510915933:585665..585796TCONS_00055180-exon-scaffold_251-1510915933:585665..585796Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1575043694:585665..585796TCONS_00055180-exon-scaffold_251-1575043694:585665..585796Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1491911889:586107..586217TCONS_00055180-exon-scaffold_251-1491911889:586107..586217Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1510915933:586107..586217TCONS_00055180-exon-scaffold_251-1510915933:586107..586217Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1575043694:586107..586217TCONS_00055180-exon-scaffold_251-1575043694:586107..586217Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1491911889:588078..588143TCONS_00055180-exon-scaffold_251-1491911889:588078..588143Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1510915933:588078..588143TCONS_00055180-exon-scaffold_251-1510915933:588078..588143Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1575043694:588078..588143TCONS_00055180-exon-scaffold_251-1575043694:588078..588143Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1491911889:588812..588993TCONS_00055180-exon-scaffold_251-1491911889:588812..588993Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1510915933:588812..588993TCONS_00055180-exon-scaffold_251-1510915933:588812..588993Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1575043694:588812..588993TCONS_00055180-exon-scaffold_251-1575043694:588812..588993Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1491911889:591599..592051TCONS_00055180-exon-scaffold_251-1491911889:591599..592051Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1510915933:591599..592051TCONS_00055180-exon-scaffold_251-1510915933:591599..592051Clytia hemisphaericaexon
TCONS_00055180-exon-scaffold_251-1575043694:591599..592051TCONS_00055180-exon-scaffold_251-1575043694:591599..592051Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_251supercontigscaffold_251:581490..592051 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0.816922 tpm) - - (34.0032 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.6444 14.8746 12.6253 34.0032 8.19854 0.816922 12.1831 10.2068 5.16701 10.7027 6.88505 13.8065 13.879 18.0299 6.27684 13.1141 17.2922 13.1415 1.0467 8.8291 1.8744 12.5731 16.2497 5.85356 11.0368 15.1661 6.93183 6.98401 9.59983 5.82558
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055180 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
100200300400500600700800900100011001200Expect = 1.89e-139 / Id = 75.92SequenceIF6
Match NameE-valueIdentityDescription
IF61.887e-13975.92Eukaryotic translation initiation factor 6 OS=Homo... [more]
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