TCONS_00055233 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055233
Unique NameTCONS_00055233
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length877

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055233 ID=TCONS_00055233|Name=TCONS_00055233|organism=Clytia hemisphaerica|type=transcript|length=877bp
TTTCGGTTAGTCAGATACGGTGCCGAATTACCCCTACTATCCTTACAAaa
tctaaaaacttttttaaaacatgATCACTTTACGTTTGTCAAGCCGTTGA
ATCACATTAGAATATGGACAGCATGTCGATTGAAAAAGAGAGTTTCTTGC
AAGATATCCGACAAGAGGAATTACATGTCGTCGATTTCATGAAGCTTTGG
TTCAAATATGACAAAAACAAAGATGGATATTTGCAGAAAAATGAAATGGA
GgACTTTTTGCGAGAAATGTtagaaaagaaaggaaaagtCGACCGACTTG
AAGAATACTATAAAAGTTGTttgTCAAACTTCGACTTAAACCACGACGGG
TTGATTGAACTGAGGGAGTTTGCACTGATCGTACCGGTTGAGAAGAACTA
TTTGGAGCAATTCTCTGAGAGTGGAGCATTTACTGTCGAGGAGTACACAA
AGGTCTTTCAACACTATGATCGGGATAACAACCAATACATTGAGAAAGAA
GAGTTGGTTTCTTTTCTAAGAGATTTAAGGAAAACACAGGATGAGGAGCC
AACGACGACAGACTTGGAAGTTTACAAAGGCTTCATTCTACAATGTTGTG
ATTCAAATAAAGATGGTCGTATATCATTTACTGAACTCAAACTATTATTG
GTCGGATGAAACTCGAACACTCAAAGACTACACAAGATTGTATTGAAATG
AACTAAATATTGAGAAATATTATCTTGACTCGATCTTGACCtgagatacc
ttatcggggaaaacttcgtcggggaaaagtgacgaaatttcggccaagtg
acgaatatttttccccgatgaaaattttccccggccttaatgcgcttacc
aaaaccagcaagtgacgaatatttttc
Run BLAST on NCBI

transcript from alignment at scaffold_251:531954..543735-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055233 ID=TCONS_00055233|Name=TCONS_00055233|organism=Clytia hemisphaerica|type=transcript|length=11782bp|location=Sequence derived from alignment at scaffold_251:531954..543735- (Clytia hemisphaerica)
TTTCGGTTAGTCAGATACGGTGCCGAATTACCCCTACTATCCTTACAAAA TCTAAAAACTTTTTTAAAACATGATCACTTTACGTTTGTCAAGCCGTTGA ATCACATTAGAATATGGACAGCGTAAGTATAAAAAAAATCCGGCAAATGT TTTACAGCTTTCCAACAACAAAACAACTTTTTTTTGACAGTCATACAGAT AGATTAGTTGTTCTGGCATTTTGTGGACTGGGGAGGAAAGGGGGGGGCAG CCTAGTAAAACTTCAAATCAATTCGCTTTCCGCTAAAGGACAGAATTTAG TAAAACAGACACATTTGGTGGTGTTTTTGTTTATTACACTTGACGAAATT TGCTCAAAAACGGGTCAAAATCTATTAAGATCATTCTTCTAAAATTGTGG CCATTCTTTGACTTTCTTGGTTAAGACTTTCAATTTTTCATTGGAAAAAT GAAGATAAGTTTGAGTTTATCGACCCAGTGTTTGACCCAGTTTTGTCTAC CTGCTGAGACTTATTCCAACTGGAAAAATAAGTCATAATATTGTCTTCAG TGGAAAATATACATAATCTTTTGTCCTTGCTGGTGCTATTTTTTCCAACC CCACTGAATTTTCTGACTTGAAAACAATGGAATTCAAATCCCCATCCATT AAAAACATGGGAATATCAATCCCCATCGAGTTTTAGCCTGTTATCTCTAC CCCAACTGGTTAGAAAAATCTTACCGGGTCTGTGAGAAGGGGATGCGCTA AGGAGGAGCCTTAAGTTCTCTGACTCATATAAAAAAGATTTAAGTGTATA AGTAGCAAGAAACATAGGAGATTGTTTTTTGTGTATAGTAAACTTTTTTG GTCGAATCAAATTTCTATCTTGCAATATTGAACAGTGAGATTTTGAAGTA TCTTTGACAGTATTGCTGGTGATAATCTCGAAAGTACTTGATGAGTACTC GTTCAACTTTCGTTCAACTCGTTCAACTAAATTCGTTTTTATAATAACAT CACCTAGACATTATTTGCACTACCCCATGAGGTTGTTACCACGAGGCATC GAAAAATAACTTCTTTTAGAAAAGCTAGAAAAGTTAGTCAGACTAACTGC AAACCGTGAAATACTTAAGAGAAAAGCAGGCAAGCATGAATCGTTTTCTT ATTTAGATGAAGTTGTAAAATAATAAGGTATTACTCTTATGACGATGGTT GAATGGCCGAAACGATCTGGATATCTGTGCATTGGAATAACACGCAGTTT AGAAACACATTTCTTTTGAATAAGTTTGAGATTATATACCCAGTGATATA ATATGAACGATTTTCATTTAGCTGGTGATTGTCGTCCATACGGGCGGCAT GAAACTTAAAGTTCTAAATAATCAATCAAAGTCTCTTTCTTTTAATTTAA ATTCATACCCTGGAACAAGTCATATTAGAATCGTATCGTGGTTTGGATCA CGGGATTCGCGTTTGGCTACGTTCCGAGAAGTTCGTCTCCAATCATTGGA GATACAAATACATTTCTGTCAATTTCGGGCAAAAAGAAATCAGCGATTTG ATTTTTCTTAATTAAAACTCCCTTATTTTTTTAAGACAACGGAGCTTATG ACTTTTAATTAAGGAAAATCAAATAGAAGTGACAAAGCAATGCGGTTAAC CTTTTGTTACGTGCACGCTTCTATTGTATAACATAAAAGGTTTTATAACT ACAGTTTACAAAGGAAACCTTCCAGTGTGAAAGCCGTGACTGGAATATGT ACCGTGTCATCTTCTCAGTTCTTGCTGTTCAGTTAATCTCTGTCTCCGAG CTTTATAAGAACATCAAGATGCTCAGTTTATTATTGGTAGATAGTTTTTG AAATTTTACTCTTGTTTTTCATCCACAAAAAGTTTTCTTATTGCTAGATA TCTTTGTATCTTTGAATCTGTACCCATTAGTTTTTCGCCAAAATCGAAAT TATAAGAACTATATTCAAGATGACAACTTTCCTGTCAGTCAGTTTGAATG ATAAATTTTGAAGGTACTGGCTTGAAATTTTCACAGTATTATCTTGATGT ACTTTTTCATTGGTTTCTAAAAAAATTTTACTGAAATATTGTGAAGGCAT CATTCGAGGCACTTTGTTTATTTTTGAGTTCTTTCAGCCCAACCATTTTG TGCTTGTTTGAATTTCCTATTGTTGATCTTTCCTTTACAATGATTTTATA ATACAAGTGTATTATCAAGGGTATATCACACTGAGAAGTAAGTATTAGTA ATATTAACGACGAACCAATAAAATTTACCATTAAAGATGGTACTTTACTG ATTTCTTGATTAAAAAAAGTCATCAACAGAGATAGAACAATAGAAATTCA GATGTTATCATTCCAGCCGCGGCTTTCTTATTATGATTTGCACTATTCGT TCTATCTATTTATACTGAGACGATTAATTTGTCTGAGACAAGGAATTTAG AAAATAAGGATTATGGAGGAGTGTACTTTCCATTCATGTTTCAATAAATA GGATCTCCTCCACAGATCACATTTTACAAACTACTCGTCTAAGACGATTT TTCCGTCTCAGTATAAATGGAACTATTATCTAGTTAAGCGAATGTTACTA CGGAGCATAAGGCTGTGGTTACACGTAACCGGGGTGACTTTCACTCCGGT CTATAAAGAAAACACTGTTTCTGTATACACATATTTAGGCGTGGTGAAAT CGCTTTTTGGCGTGCTAATTTCACTGCAAAAATTATAAGAGTGCAGAATT TCAATGGTATTTTATGGGTTTTATTTTCTTTCCAGTAGCAGTTTAAGTCC CCAATACCCTAGCAATTCAGTCCATAGGCGTAGCGAGATACCCTGCAAAA TTTATGGATGAGAGCGGTTTTTACGACACTGTAATACACGTATTTCCTAT TAGCGGATTCATGTAAAAAAGTCACGAAAAACGTAGAAAAAGTCCCTGAT TGGCTGAAATATTGCATATACAAGCATATTTTTCAAAATATCCAGAGTAT GAGGTAATCTTTGCATGCCTCCGCCAATCATAAGTTTGTTTACTCGACGT TTTCTCGTGACTTTTGCACGAATCTGCTAATAGGAAATAGGTGTATTGTC TTTGTTTTATCGAAAGATAATGAATATGTCATAAACGTCTGCACTCCCTC ATAGATTTTGCAGGGTTTCTCGCTACGCCTAGGCTAACGATTCAAAGTAT TTCTGAATTCTATTCTTTTTGCAGATGTCGATTGAAAAAGAGAGTTTCTT GCAAGATATCCGACAAGAGGAATTACATGTCGTCGATTTCATGAAGGTTT GTTAACGACAAGGACAATAACCTTATTAATTCTTGATATACGTAAGTCAA ATATGACGTCATATTTTTTAACGGAAGCACCCGAAAAAAGCCGGATTTTG GGTGTTTCTAAACGTTGACCAGAAATGACGACCACGACCGGCAACCACGA CCAGCGTCCAGATAAATTTGGGTTATTGAGTTTTTCTCATTCTCCAACGT AGAGTCTCCCTTAATTATTTGAATATATATCATATTGAAGAGTAAGCTCG CCCCTGTTTCATCTACCTAAAGCCACGTGTCAAATACGTAAAACAACCAT TGTGACGCTCTTGGAGCTTGATTATGGTGTCAATTTCTATCATTTTGTAT TGTCAGCATCACAATAATTAGTGGCACCAAATTTTTTGAAAATGGTTTGA GAAGCTTTGTATTTCATCATCAGATTGTTATTTCTGTCGAAATTAGTCAT TTTGTCAGCATTAAGACAATAGAATAATTGATTAGATTTACATCTCTAAA ACAGGCCTTCCCATTTTTTTCCTACTGACAAGTTCTATCTATTCATACTA AAGGTATCTCATTCAACATAATTAAAATATTTGGTTTAACAAAGCTTAAT AACATTATACTTAATGACCCTGTCAATATTTTTGTCAAATAGTGTCACTT TGTCAAGAAAATGACTGGTTACTTCGAAAAAGTCACTTTTTAGTATTCTC AGGACTTGATTTAAACTCGATAACCCAAATTTATCTAGTCGCTGGTCGTG GTCGCCATTTCTGATCGATGTTTAGAAACTCCCCGGATTTTGACCTCCGT GTTTCTATAGGCTAATCGGAAAGCAAGGTGAGCATAGTCACAGATTTATA AAGCCCGAAGGGCTAGATGTCGTGTTTTGGCATGGGAAGTGTGCCGTGGC TAGGTAGGAAATCGTACCTAGGTCACGTGACAGTGCAATAGAATTTCAGC GCTTGACCAATCAGAAGCTTCATGCGTTTTCGAAAACAAAAGCAACAGTA TTTTTTTTTGCGATATTCAATTTTCTTTGCCTGTGATGACTTAAGCCTTT CGGGCTTTATAAATCTCTTAGCATAACCCGCAAATAAATCAACTTTGCTT TTAGAACAAATCTCCGCTCGATATTTTGTTCTACAATCGGCGTCGAAATA TTTGGTAAAAAAGGGGAATTCGACCTCAAATTTTTAAAACCGCAAGTGAT TTTTAAGTGCTTTGAAGTACAGTTCGGAAGTAGAGTTTTAACTCTGAGTT TTAACATGAGACTTAAGACTTGGGAAGACCTTAGGATCTCAGGATCTAAA AGCTCAGAAATGTTCCAATAAGGCAGAGAATACAGCCTAGAAGCCACTTA ACCCCTCCTAAATCAAAAAATCCAATGAAACAAAGTGGAAATACTGAAAC TGTAATTCTCGCTTCGACCTTTAAATTCTGAAAAACGTTAAAATACCCAA AATTGCCAATGTATTTCGGTGCTGATTGTAGAATTAAACCTGTAGAAAAA AGCCGTGGCGTGAACGAAGGGTAGAGGAAGTTTGTTTGTCGTCGTGATTT ATCCATCGATATTTAACCATAGTCCGTATAAAAAACCGGGTCTGGAAGCC TTTTGTTTCTTTTCATCGTTTCTAACTTGAACTTACGTTGAGAAATTAGT TTGTTTTGCTCGCTTTGTGATTAAATCTTAAACCAATCCTAAGAGGAATA CTTGGTTGGTAACGTGATCAAAAACTGAGCAAATCGATTTCTATTTTTTG ATATAATCGCACGATGGGTTATTTTTTCTTATTTGGCACGCCCTCAAAGA GAGCAATTAATCGTTAATTGCATCCTGTAGAGAGCAATAAATCGTTAATC ACACTCTACAATGTGGCGCCAATGTTTACAAAATTGATTTTAATGTTTTT TCTTGCATTTTTTTTGCATCGAACGTTTTAATTGCATTCAAAATTTATTT TGTGAGAAAGAAAATCAATAAACAACAAAAAAAGAAAGACACAGAGAGAA GAGAAAAATATAAAACCTTCAGTGTAATTTCTGTAATTTACTTTCCTAAC TGGGAAAAAGTAGTGAAAGTCATTGTGCNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATTTTCC TCGTCCTTTCGGACTCGGAAAATTAATAACAAAAAAATCACTCGTGCAAT TATTCTCGAATTGCACTCGTTATCATGTGATTACATATACTTAACAAAGG AAAAAGCTAACAAAAAGTTGAAACAATAAGTTTCCAGACCAGGGTTTTTT AAACAGACTATGATTTAACCTCGCTAATAACATGCTAATAATATGTATTT ATAGAATGCCTCCAGCTAACTATCCAAAAATTCGCCCAACAATAAAACGC AACATAAAAATCACTTAAATCCGAATAGTGCTGTGGTACGCCCACTTTGA CTAGCACATAATTTGGGAGGCTTTTGTTGAGCAAGGGTGGCCAGCTTGGT TTATATTTCAAAGTTTTAGCTAGTTTGCATTTTCAGCCGAGTAAATCTTT TCATTTCAATTTTGAAGGAACTTTAGGCTTGTTTACCTAAACCCAGTACC AAAGTGTATCTCACGTTTATCGTTTTGTAGTACGGCAATGAATTTTGAAA TTAGCCGTAAATCGGGTCTGTGTACAGACTACAGAAACCCAAGATAGCTG AATAAAAAACACAAAATAAGTTTACTACCTTGTCCAGCTTACTCCATACC GTAGCTTGTTAAAATCTCTTTCACTGGTTGGAGGGTTAATTTCAAGTGAC GTGTTGCCATGGTTAGAAATTTCTATAATAGAATTAAAATTTAGAAATTG TATATTTTAGAAATATATAGTTTACTCTCGCTTATTCGAACTTCTACTAT TCGAGTCTTTCTATAATTCAAACTCATTTCCAGTCCCTGTCAAGGAGAAA CTCTCTTAAAATACCCTCTAGACAAGACAAGATTCCCCGTTCGAGTTCGA ATAAGCGATGAGATTCAAGTCAACTGCATTATAGATTAAATCTGATTTTT ACGCTTTTTCAAAATAAGCCTCGTAATGAATTGTGAATATCTGTTTCAGC TTTGGTTCAAATATGACAAAAACAAAGATGGATATTTGCAGAAAAATGAA ATGGAGGTATTATGAACCCAGAGAATTATAAAAAAGTACTTTTTCAAAGT AGTAGTAATTTTCACTTTCTGAAATGTCTCATTGACCTGGTGACAAAAAA AAGAGCTGAATACCAAATAGAGCCTTAGAAGACTTTTTCTCCCTATAAGA TGAGTGGACGTTTTGTTTGCAGGGTGTCTTCGATGCAGGGTGTTGTCAAA AGGTCTTTGTGTTATCTGGTATCCAGATGCAGAAATGTTCATCCGACATG CTAAAGCTCTGAAGGTCGAGAAAATTTTCAACATCTGGGATGTTAAGATT ACGGAATTTTGCCAGACCACGTCAAGGATTTTGCAGCGGGAGGTCTGGTA ACCCAGCCCTGGTTTTAGGGAATTGGCGGGTCCAACCGAAATATTTACGA TACGCGCAAGGGTAGTTGAACCCGACTTGGGATACGGCACATCAAAGGCC GATTACCATTCCTCTCCGATGGGAAATTGGCCCGCATCTTTAGAGCTTTA CTGTGGGCGGCCGTGAATCCCCCATCGGAATATCAGATAAGTCTTTGTGA AACCTTCTTTTATGGATGTTATCCCCACGTTTCAAACTAAAAATTTTCCT TTTTAGGACTTTTTGCGAGAAATGTTAGAAAAGAAAGGAAAAGTCGACCG ACTTGAAGAATACTATAAAAGTTGTGTAAGTATCTCGACTACATGGTCAT AAAGCATATGCAGGCTCAGTTTCTGGTACCTAAACAATCGCTCTATTGTT TAGGATCAAATGAATGCTAAGCATAATGCAAGTCTGATATAGGGGTACTT GCTCATTACTATACTATACATTACTTTACTTACTATTTTTTATATTTTCA GTTGTCAAACTTCGACTTAAACCACGACGGGTTGATTGAACTGAGGGAGT TTGCACTGTAAGTTCATGAATTGAACTCCTGAACCCAGCACAACGTTGTT TCAACGTTCATCTAACGTTATATGGACGTTGTGAACGTTAGATAAACGTC AAAAAACGTTGTGTGCCAGCTGGGGCTAAACCCCAGATAGGCTACTGTAT TTCTTTTGTGTACGACTGTTTAGGTAAAACTCACTCAGCTCTCCTTTAGA CGGCCAACTTTCTGCTCTGCCTTTTCTAATTGTTAAGTAGGCAAAAAGTA GGGAGAAAGTTGGCAGTTAAAATCTTGCTTGCTTGAAAAGATTGAAAGCC GCAGTCATTGCATTGCCGTAAAAACTGTGTCATGCGCGGAGGAATCAGGA TCTGCTCGGAGTTATCATTGGGACATAGAATTCTTTATTAAAGACGAACT TCTTTTGTTCATAGGATCGTACCGGTTGAGAAGAACTATTTGGAGCAATT CTCTGAGAGTGTAAGTGTATAACATTTCATTTGATGTTCATTTTATTTTC CAATTCATTTTCATTCATTGGGCTTTTCTAGAAAGTGTTCCTACATGGGG GTGGAAGATATATTGTCCGGGGTAGTGAAAAATCTAAAAAATTTGTCTTT TGCTCTGTTTGGGGTAATTCCGCTCTTTTGGAGGATAATTTTAAATATCC AGGGGGTCAACTGATGTGTGTCCGAGAGTTAGGTCTGTTGTCCAGGGGGT CAAAAGTCACAATGTCCGGGGGTATATTTCTAACAAATGCCGTATCCTCT TCTCCCACATACTCAATTTTTTTCTGGAAAAGCCCATTTTGAAAATTGAC TCTACAATCCTAGCCAGAATTTATTGGCATTTTAAATCTGAAAAGCTCAG AGAACCGTTAAATTGATGCATCACCAGTTTGCTTTGTCCCCCTTCCCCAA GCTTAAAGGGGGACTCACCCCAAGACACCCATCAAACTATTGAAGTTGGG GTGGGATGGCGGAAGCTGAAATCATGCGGACAACTCTTGATTTATTACCG AATATGACGAACATTTCCAGGGGGTAAAAGGAGAAGAATTGCCAGAGGGT GTAAAGGAGTAGTTTTTAATTTTTCCAGTGTAGGTAAAAAGTTATTCTAA AACTTCTAGATGGTAAAAGAACGATTTTAGTTCGTCCACCCTCACTTTTA AGGTATGAAAAGAATTTTTCCAAGGGTTCTTTTGCAAATTTTGCCATTTT CCAGGGGGTATCTGCACAATTCTAAGAATCTGTTTTTGCCTTGAAATTGC CCCCCCCCCTGTGTATGGAAATTTAATGGAACAGCCCATTATTGATAGAT TTAGCTTAAACCTTAGCCTCTATGATAATCAATTTATCTCGTTTTTTAGG GAGCATTTACTGTCGAGGAGTACACAAAGGTCTTTCAACACTATGATCGG GTCAGTAATATGCACAGTCAAGCTTTTATTTCCGAATCAAAATAAATTAG CCGAAGGGGAAACAGTAGCGTAGACAGGGGTGAAGGTCGTGAAGGAGCAT TTGTACAAGAGAGCAGATTTTAACGACACAGTAATTAAGTTTTTATACCA CGAATAGGTAAGTGCTTTGTCGTAAAATCGATGAATAATGGAAAATATAA GACCCTTCAGTTCAAGGAACCAAAGTTCTAGCTCGAATTATAGAAAGATT TGAAATAGAGAATAACATAAACTTCCCTTCAAGCTTAAGAATCTAGCGAG GCCGAGATGCACCGTCCGCAGTTGCTACTTCTGTCAATGGGTTAAGTATA AACGAGTAGTAGATCTGAGAAAGTTCAAAATATTTGAGAGGGAGTATTTC TTTTATCCATACTCTTTATATTAAAAGATGAAAACTATTAGTCTTTAATT TTGACCTTCCCTTGGATCCGCAATTATACTAAAAAATATATTTATCTGAA GCTTTTTATCACAGATTATCCAGGTTCAAGCCAAGTTTCCGGACAAATGT CAATACAGCTCATTGAAATTTACGCATTGTATTTTAACGAATTTCAAATT CTTTTTACCTTATAGGATAACAACCAATACATTGAGAAAGAAGAGTTGGT TTCTTTTCTAAGAGATTTAAGGAAAACACAGGATGAGGTAAGAATGCCTA CCTATACGTTGTAGAGGAGTGAGGGAATCTAGTCTAGAATCTTCTTTTCT TCTCATAGTCCATTTCACAGTCGAAATGGATCATGGGTAATCAGGACTGA TTGCGCCTCTATAACGGCTTTCTGTTGGCTAGACGCAAAAATCTTCAAAA AATTTCAAAATTTTGGACCAATAGCAAGTCGTCATTAGCGCGCAGTGGTC CTAATTACCCATTACGCTTTGCGGCGACTGTGAAATGACCTATGTTAGGA GCTGTGAAACTGAATGTGAAGTGGAGTATGGCACTTACTGTATTCATAAT ATAGACTTTCTTATGTAATGTTGTACCGCCAGGCCTTTCTTCTTTGATCA GTTTATCCAATTTGAGCTACACTTTGGCTGAGGTGGCTGCAACCTGAGAT TAAACCCAACACCCAGTCATCTAAGCTGGTACTCAGCATTGTTCCAACGT TCAACTAACGTCCAAAACCTATAACGTTATATGGACAAAATTAAGTGTCA GCTAGCTACCGAAGGGGGGGTTCGTATTCCCGTCAAAATTTTTGCTGAAT CCTGGAATCCCGAAAATTGAAAAAAATAATAACACCGTCACAATGGTTTG TACAGGTTCAAATACCGGCATAATGACAAAAAAGGCCAAATACCGTCACC GTCTGATTTTAAAATACCGTTTTCCCGTCTTTTTTTCGTCAAATCCCGTA ATACCGTACTAAAAAAGGGCCAATCCCGTCACACCGTAAAAGTACAAACC CCCCTACCGATAGCCACGATTTGACATTACTATTAAAGTCCCAAATAAAT GGGGGAGGGGGGTCCTAAATATTTTCAAAATATAATAAACGGCGTGGACC TAATTGCTGGGGGGGGCGGAAATAACTAGGGCTCTTTGGAGCAATTCAGC TTTTGAACGATGATAATATCTAAAAAAAAAAAAATGTCTAATTAAGAACT GTTCATAAATTACATTGTGAGCATCTATTGCCTCGTTTTGACTTGATTGC TCTGGAAATTGGATCCCAAAAGAGTTCAACGAAACTGGACACTACAGGGT GTCCGGAAAAAAAGTATCGAGTTCGAACATGATTCTGAGTAGAAGGTTGT TGCGCGTGTTTAACAAAATGTAAGAAAATATATACCAACACAATAATTGC TTTTACAACAGTCATTTACAATAAAAATAATTAACTTTCTTGACAATTAT TAATATGACACAGAGAGAAACACAAGAACTTTCTTTCTAAAGAACTGGTA CGACTCGGTACTTTTTTTCGGGACACCCTGTATTGAAAAATGCATCATTT TAAGTATCTTAAAATATAATTACCTTGGTAAAGGCCGATCTCCACTTTCG CGCGACATGAGCGAAAACTTTTTGACGTTTTCGTAAGGACATTGGTCGGT TGAAAAATAAAGCAATTCCATTGGTCGAAATTGACGTAACGGATGAAAAA AGTAGAACTTCCTTCAACTTTTTTTTTGTTCACGCGAAACCTTTTATGGC GTAATCTTTTCTTCAGGCAAAAAAGGTTAAGAAAAAAACTGTTGCCTATT TTGCGCGAAAGTGGAGTCCGGCCTTAATTGTCTGAAAACGAGGCATTCGC TGTTCGTGACGTAATTCATGAAAAGGTCTATTTCACTTCACTTTTTCTAG GAGCCAACGACGACAGACTTGGAAGTTTACAAAGGCTTCATTCTACAATG TTGTGATTCAAATAAAGATGGTCGTATATCATTTACTGAACTCAAACTAT TATTGGTCGGATGAAACTCGAACACTCAAAGACTACACAAGATTGTATTG AAATGAACTAAATATTGAGAAATATTATCTTGACTCGATCTTGACCTGAG ATACCTTATCGGGGAAAACTTCGTCGGGGAAAAGTGACGAAATTTCGGCC AAGTGACGAATATTTTTCCCCGATGAAAATTTTCCCCGGCCTTAATGCGC TTACCAAAACCAGCAAGTGACGAATATTTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034785XLOC_034785Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055233-exon-scaffold_251-1575043694:543614..543735TCONS_00055233-exon-scaffold_251-1575043694:543614..543735Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1575043694:540440..540511TCONS_00055233-exon-scaffold_251-1575043694:540440..540511Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1575043694:536930..536986TCONS_00055233-exon-scaffold_251-1575043694:536930..536986Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1575043694:536261..536329TCONS_00055233-exon-scaffold_251-1575043694:536261..536329Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1575043694:536029..536084TCONS_00055233-exon-scaffold_251-1575043694:536029..536084Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1575043694:535576..535621TCONS_00055233-exon-scaffold_251-1575043694:535576..535621Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1575043694:534636..534686TCONS_00055233-exon-scaffold_251-1575043694:534636..534686Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1575043694:533949..534020TCONS_00055233-exon-scaffold_251-1575043694:533949..534020Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1575043694:531954..532285TCONS_00055233-exon-scaffold_251-1575043694:531954..532285Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1510915933:543614..543735TCONS_00055233-exon-scaffold_251-1510915933:543614..543735Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1510915933:540440..540511TCONS_00055233-exon-scaffold_251-1510915933:540440..540511Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1510915933:536930..536986TCONS_00055233-exon-scaffold_251-1510915933:536930..536986Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1510915933:536261..536329TCONS_00055233-exon-scaffold_251-1510915933:536261..536329Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1510915933:536029..536084TCONS_00055233-exon-scaffold_251-1510915933:536029..536084Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1510915933:535576..535621TCONS_00055233-exon-scaffold_251-1510915933:535576..535621Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1510915933:534636..534686TCONS_00055233-exon-scaffold_251-1510915933:534636..534686Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1510915933:533949..534020TCONS_00055233-exon-scaffold_251-1510915933:533949..534020Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1510915933:531954..532285TCONS_00055233-exon-scaffold_251-1510915933:531954..532285Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1491911889:543614..543735TCONS_00055233-exon-scaffold_251-1491911889:543614..543735Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1491911889:540440..540511TCONS_00055233-exon-scaffold_251-1491911889:540440..540511Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1491911889:536930..536986TCONS_00055233-exon-scaffold_251-1491911889:536930..536986Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1491911889:536261..536329TCONS_00055233-exon-scaffold_251-1491911889:536261..536329Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1491911889:536029..536084TCONS_00055233-exon-scaffold_251-1491911889:536029..536084Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1491911889:535576..535621TCONS_00055233-exon-scaffold_251-1491911889:535576..535621Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1491911889:534636..534686TCONS_00055233-exon-scaffold_251-1491911889:534636..534686Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1491911889:533949..534020TCONS_00055233-exon-scaffold_251-1491911889:533949..534020Clytia hemisphaericaexon
TCONS_00055233-exon-scaffold_251-1491911889:531954..532285TCONS_00055233-exon-scaffold_251-1491911889:531954..532285Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_251supercontigscaffold_251:531954..543735 -
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0.427172 2.53518 2.25879 34.4643 24.1454 6.46725 6.57226 0.60436 2.61033 12.6004 0.00213868 21.9094 24.5727 0 0 0.702363 0.084434 1.81877 0.729842 0 0.867031 11.2364 22.5116 0 1.12864 0.696163 0
Blast
BLAST of TCONS_00055233 vs. Swiss-Prot (Human)
Match: CALB2 (Calretinin OS=Homo sapiens GN=CALB2 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 2.291e-24
Identity = 54/161 (33.54%), Postives = 95/161 (59.01%), Query Frame = 3
Query:  138 ESFLQDIRQEELHVVDFMKLWFKYDKNKDGYLQKNEMEDFLREMLEKKGKV---DRLEEYYKSCLSNFDLNHDGLIELREFALIVPVEKNYLEQFSESGAFTVEEYTKVFQHYDRDNNQYIEKEELVSFLRDLRKTQDEEPTTTDLEVYKGFILQCCDSNK 611
            E+FL   RQ      +FM+ W KYD ++ GY++ NE++ FL ++L+K  +     +L+EY ++ L  FDLN DG + L E + ++PV++N+L +F +    T EE+  +F  YD+D + YI++ EL + L+DL +   +E     L  Y+  ++   ++ K
Sbjct:   96 ENFLLCFRQHVGSSAEFMEAWRKYDTDRSGYIEANELKGFLSDLLKKANRPYDEPKLQEYTQTILRMFDLNGDGKLGLSEMSRLLPVQENFLLKF-QGMKLTSEEFNAIFTFYDKDRSGYIDEHELDALLKDLYEKNKKEMNIQQLTNYRKSVMSLAEAGK 255          

HSP 2 Score: 90.5077 bits (223), Expect = 4.715e-21
Identity = 56/167 (33.53%), Postives = 89/167 (53.29%), Query Frame = 3
Query:  168 ELHVVDFMKLWFKYDKNKDGYLQKNEMEDFLREM-LEKKG-----KVDRLEEYYKSCLSNFDLNHDGLIELREFALIVPVEKNYLEQFSESGAFTVEEYTKVFQHYDRDNNQYIEKEELVSFLRDLRKTQDEEPTTTDLEVYKGFILQCCDSNKDGRISFTELKLLL 650
            EL    F+++W  +D + +GY++  E+E+F +E+   +KG     K D   E  K  +  +D N DG IE+ E A I+P E+N+L  F +    + E + + ++ YD D + YIE  EL  FL DL K  +       L+ Y   IL+  D N DG++  +E+  LL
Sbjct:   15 ELTASQFLEIWKHFDADGNGYIEGKELENFFQELEKARKGSGMMSKSDNFGEKMKEFMQKYDKNSDGKIEMAELAQILPTEENFLLCFRQHVGSSAE-FMEAWRKYDTDRSGYIEANELKGFLSDLLKKANRPYDEPKLQEYTQTILRMFDLNGDGKLGLSEMSRLL 180          
The following BLAST results are available for this feature:
BLAST of TCONS_00055233 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALB22.291e-2433.54Calretinin OS=Homo sapiens GN=CALB2 PE=2 SV=2[more]
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