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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055300 ID=TCONS_00055300|Name=TCONS_00055300|organism=Clytia hemisphaerica|type=transcript|length=1275bp
atgctaaactttttgttttatttatggcgattttgaaaaatattttatgc
cCTATTTTTGACAAAGTATATATTCCATAATGCTTTGCGCTGGAAATACG
CGGGAAATATCcccgattttcccgattttgatgaaatcttcTTCGTTCCC
GTAATTTTGGCTCAGGCAAAAGATGCCAAAGGCTGACTTGCCcgccaaaa
attttttaaaacgtgCTTGGACACAGAGCGGATAACAGCTATTAAGTATA
AAGAAGTATCGTGTTCAGGATGAATACTAATACCAGAAGAAACTTGACTG
CATTGGCCAATTCGGCCAACGAACTTTCAAGGTCGTTGGCCCCACCACCA
GTAGATTCACAAACCAGCATAGCAACAAGCACGAGACCGTCAATACCATC
AACAAGTTCAGCCAGATCTGGTTCAGCATCAGCAGCACGTGAAGTGCAAA
GCCTCTTCCCTACCCTAGTGAATACCGCAGAAAGAGCAAACAAAGCCAAa
ggtaaaaagaagaaaattagcaaaaaggaaaaaatcataacaacccACAA
AGATGTGGTATTATTGCCACATGGTTGTGAAGCTGTCCCTACACATCAAG
CCAGAATCAATCTGGAAAATCAAGCCATGGTTGTACACCGTTATCCTGTT
GAAAGGCAATGGGATGAGCAGCAAATGAAAGTGGCAATTCTTGCGCTTTT
CAAAGACAAGAACTTGACATCTTTCCAATACGTCAAGGCTTGTTACAGTC
GAAttattgttccaaacttagCAATGGGTGAAGTTTATGATGCCAGATGT
GTTCTTGATCTAAGTGGACAGGGTGCTCTATATGTCCGTgcattggaaaa
aaatccacttCTGTCAATGAATGAAGAAGAGACTTCgcaaagtgaagaag
aagatggtaattatatatctttttttaattttattcaaatgaccatcgaa
aaattgttctgttcacATCATCTCAAACAGGTGTTAAGGACAGCAGTCTG
TAAAAACTCGACTTCGACCCGGACCCAAGAAAAAGCAGACCCTCGACCTG
TAAAAAGCCGACCCTCTTCTGggtaaaaaacattgaaaaaatctgaaaat
cttcTCTGTTCGGTTTCTGGAACCTGAAGATGGCCCTTGGTAAGCCCATT
TGACTAAGTGTCACCTCAGGGCAGGGGGAGAATACATAACTTGgaccccc
caatatggaccccaattATGGATCCCTTCAAAAATGGGGGGAAATGTAAA
AACCAGCTCTCACAGACCCTGGTTC Run BLAST on NCBI transcript from alignment at scaffold_252:4251..5525+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055300 ID=TCONS_00055300|Name=TCONS_00055300|organism=Clytia hemisphaerica|type=transcript|length=1275bp|location=Sequence derived from alignment at scaffold_252:4251..5525+ (Clytia hemisphaerica)
atgctaaactttttgttttatttatggcgattttgaaaaatattttatgc
cCTATTTTTGACAAAGTATATATTCCATAATGCTTTGCGCTGGAAATACG
CGGGAAATATCcccgattttcccgattttgatgaaatcttcTTCGTTCCC
GTAATTTTGGCTCAGGCAAAAGATGCCAAAGGCTGACTTGCCcgccaaaa
attttttaaaacgtgCTTGGACACAGAGCGGATAACAGCTATTAAGTATA
AAGAAGTATCGTGTTCAGGATGAATACTAATACCAGAAGAAACTTGACTG
CATTGGCCAATTCGGCCAACGAACTTTCAAGGTCGTTGGCCCCACCACCA
GTAGATTCACAAACCAGCATAGCAACAAGCACGAGACCGTCAATACCATC
AACAAGTTCAGCCAGATCTGGTTCAGCATCAGCAGCACGTGAAGTGCAAA
GCCTCTTCCCTACCCTAGTGAATACCGCAGAAAGAGCAAACAAAGCCAAa
ggtaaaaagaagaaaattagcaaaaaggaaaaaatcataacaacccACAA
AGATGTGGTATTATTGCCACATGGTTGTGAAGCTGTCCCTACACATCAAG
CCAGAATCAATCTGGAAAATCAAGCCATGGTTGTACACCGTTATCCTGTT
GAAAGGCAATGGGATGAGCAGCAAATGAAAGTGGCAATTCTTGCGCTTTT
CAAAGACAAGAACTTGACATCTTTCCAATACGTCAAGGCTTGTTACAGTC
GAAttattgttccaaacttagCAATGGGTGAAGTTTATGATGCCAGATGT
GTTCTTGATCTAAGTGGACAGGGTGCTCTATATGTCCGTgcattggaaaa
aaatccacttCTGTCAATGAATGAAGAAGAGACTTCgcaaagtgaagaag
aagatggtaattatatatctttttttaattttattcaaatgaccatcgaa
aaattgttctgttcacATCATCTCAAACAGGTGTTAAGGACAGCAGTCTG
TAAAAACTCGACTTCGACCCGGACCCAAGAAAAAGCAGACCCTCGACCTG
TAAAAAGCCGACCCTCTTCTGggtaaaaaacattgaaaaaatctgaaaat
cttcTCTGTTCGGTTTCTGGAACCTGAAGATGGCCCTTGGTAAGCCCATT
TGACTAAGTGTCACCTCAGGGCAGGGGGAGAATACATAACTTGgaccccc
caatatggaccccaattATGGATCCCTTCAAAAATGGGGGGAAATGTAAA
AACCAGCTCTCACAGACCCTGGTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055300-exon-scaffold_252-1491911889:4251..5525 | TCONS_00055300-exon-scaffold_252-1491911889:4251..5525 | Clytia hemisphaerica | exon |
| TCONS_00055300-exon-scaffold_252-1510915933:4251..5525 | TCONS_00055300-exon-scaffold_252-1510915933:4251..5525 | Clytia hemisphaerica | exon |
| TCONS_00055300-exon-scaffold_252-1575043694:4251..5525 | TCONS_00055300-exon-scaffold_252-1575043694:4251..5525 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_252 | supercontig | scaffold_252:4251..5525 + |
Blast
The following BLAST results are available for this feature:
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