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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055305 ID=TCONS_00055305|Name=TCONS_00055305|organism=Clytia hemisphaerica|type=transcript|length=908bp
GCACaatgaggctgaaaattgggTAAAAATGTGCTAAGCATACTACCAAA
GCTAAGAATAAGAAATTTTGAACAACTTTAATTTCTTCCAGGGCACTTTC
AAGTATAAAATTCCTGTATTTTGATTACCATTTTCAATGATATGGAAAAC
TTTgggcaattttttttattttgattagaTTTGCATCCActtaaaattcg
aaattttcatgaagTCTCCCTTAAGCATAAATTTAGGCTGAAAATAAATT
TCTCTAATCATATTGAGCCTCGACCCaattttcccgtatgcttataaata
aaaaagactGTAATCAGATTATActtctaaaaataaaacaaaagacgTTA
ACCAATCATACTAATTATTTCTCGCCCCAATGCGATTTAGTTTAAAGTGC
GTGTATGCTTCCATAAATTTATCCAACTGACATTTAATTGCAGGGATGAC
CTTAGAGTCCCTGAAAATCGTGTAAGAGAGTAGGGAAAACGCCAGTTGca
attgcgtggggtattcaATGTCAAACAGATAGTAAAACCCTATTATTGTA
ATGATGGCTAATTCTAGGCGGCTCGACACACTTTCTGGAAAAGTGGCGAG
CACTTTCCCATGCGCCAAAATTTGTGTCACAGTGTCACCATGGACTACGA
CTATTAAAGGATTGGAAGCCAACGACGATAGCTTTGCctggaaaataaaa
caaatacaaAGGATAAAGTAATGGTCGATGGTTTAACATATTTTCAGGTC
ACGtggattttttaatttgaatacAGAATTTCTTTCATaagatagaaaaa
ttttcagcttgattttaagggctttagcaatacatttataaaaaatgtgt
accgaAAGAACGTTTTTCCTACCTTACTGCCTAAACTTATGTCGATTTTC
TTTCTTCC Run BLAST on NCBI transcript from alignment at scaffold_252:11485..12392 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055305 ID=TCONS_00055305|Name=TCONS_00055305|organism=Clytia hemisphaerica|type=transcript|length=908bp|location=Sequence derived from alignment at scaffold_252:11485..12392 (Clytia hemisphaerica)
GGAAGAAAGAAAATCGACATAAGTTTAGGCAGTAAGGTAGGAAAAACGTT
CTTtcggtacacattttttataaatgtattgctaaagcccttaaaatcaa
gctgaaaatttttctatcttATGAAAGAAATTCTgtattcaaattaaaaa
atccaCGTGACCTGAAAATATGTTAAACCATCGACCATTACTTTATCCTt
tgtatttgttttattttccagGCAAAGCTATCGTCGTTGGCTTCCAATCC
TTTAATAGTCGTAGTCCATGGTGACACTGTGACACAAATTTTGGCGCATG
GGAAAGTGCTCGCCACTTTTCCAGAAAGTGTGTCGAGCCGCCTAGAATTA
GCCATCATTACAATAATAGGGTTTTACTATCTGTTTGACATtgaataccc
cacgcaattgCAACTGGCGTTTTCCCTACTCTCTTACACGATTTTCAGGG
ACTCTAAGGTCATCCCTGCAATTAAATGTCAGTTGGATAAATTTATGGAA
GCATACACGCACTTTAAACTAAATCGCATTGGGGCGAGAAATAATTAGTA
TGATTGGTTAAcgtcttttgttttatttttagaagTATAATCTGATTACa
gtcttttttatttataagcatacgggaaaattGGGTCGAGGCTCAATATG
ATTAGAGAAATTTATTTTCAGCCTAAATTTATGCTTAAGGGAGActtcat
gaaaatttcgaattttaagTGGATGCAAAtctaatcaaaataaaaaaaat
tgcccAAAGTTTTCCATATCATTGAAAATGGTAATCAAAATACAGGAATT
TTATACTTGAAAGTGCCCTGGAAGAAATTAAAGTTGTTCAAAATTTCTTA
TTCTTAGCTTTGGTAGTATGCTTAGCACATTTTTAcccaattttcagcct
cattGTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055305-exon-scaffold_252-1491911889:11485..12392 | TCONS_00055305-exon-scaffold_252-1491911889:11485..12392 | Clytia hemisphaerica | exon |
| TCONS_00055305-exon-scaffold_252-1510915933:11485..12392 | TCONS_00055305-exon-scaffold_252-1510915933:11485..12392 | Clytia hemisphaerica | exon |
| TCONS_00055305-exon-scaffold_252-1575043694:11485..12392 | TCONS_00055305-exon-scaffold_252-1575043694:11485..12392 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_252 | supercontig | scaffold_252:11485..12392 . |
Blast
The following BLAST results are available for this feature:
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