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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055308 ID=TCONS_00055308|Name=TCONS_00055308|organism=Clytia hemisphaerica|type=transcript|length=997bp
TCTTGATTTTGTTAGTTTTGTCTGATGTCGATTCCCTGTCATCTTCACCT
CTGATGAACTTCTTCGCAACAAAGACAATACAGAGTATTTTGCGTCTACT
CGGGAGATGTTTCTTTGAATGATACCAATCTATTGAAAAGAACATTTTCA
CAGTCCATTGTCATTCTTCTCTCTTGATACTcgttcatttaaaaaaaaaa
ttcaaataactcTTTCATCTTTCAACATTTTGGTACAAAAATTCCCGAGA
TTGTTTAGAATTTCTGACAATAGTCTAAGCATTAATATTTACATTCTCTG
TAAGTTTAATTATTATTTCTCATACCTGTTAGTCTCTCCGAATAAACTtc
atcaaatttggtatttttcgaAACGACGACTTCATCTTGTTCACACTCTT
GTTTAGACTCTTCATCTTGGCTATTATTGATATCAATATCACATCTTGTT
AATTGTTTCAAATAAGACTTTACAACCAACAAGATATAATTGTAAAAAAG
TTATTTATGAGTTTTCAAGCACAAAATCAATCTGTTCACAAGTTATATGA
GAAACCAAAAGATTGAGAATGTTGAAATAGTAGACATTCACgcacaattt
tgaaaaattactttggTATTTCAAATGGCAAAcgataaaaattttaatac
AACAAGTTTTCCTAGggtaaaacttaaaattttcatgttgTTGTTCTATT
TCATTCCTCAAAAAAGCAAAATGTTCAAAGTATTTCAAACATAATCAAGC
AGTATTGAGAAGAAGTTTCTTTACTTTTGCGCGGTTTATAGACTAGAATT
TAGTTCACGGTTATAGACTAGAAGTTAATATCGTTCATATTACTCTGTGC
AAGCCGTCCAAGTACTTGGTCCGGCGTCTTACTTATCTGCTTTCccatgg
cggattggcggccgcccacgctgaaactctaaattggcccaaaaaattaa
gaaaagtcGGCCTAGAACCCGGTACGACTTCCCGTGCCGAGCAGTCG Run BLAST on NCBI transcript from alignment at scaffold_252:21812..22808 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055308 ID=TCONS_00055308|Name=TCONS_00055308|organism=Clytia hemisphaerica|type=transcript|length=997bp|location=Sequence derived from alignment at scaffold_252:21812..22808 (Clytia hemisphaerica)
CGACTGCTCGGCACGGGAAGTCGTACCGGGTTCTAGGCCgacttttctta
attttttgggccaatttagagtttcagcgtgggcggccgccaatccgcca
tggGAAAGCAGATAAGTAAGACGCCGGACCAAGTACTTGGACGGCTTGCA
CAGAGTAATATGAACGATATTAACTTCTAGTCTATAACCGTGAACTAAAT
TCTAGTCTATAAACCGCGCAAAAGTAAAGAAACTTCTTCTCAATACTGCT
TGATTATGTTTGAAATACTTTGAACATTTTGCTTTTTTGAGGAATGAAAT
AGAACAAcaacatgaaaattttaagttttaccCTAGGAAAACTTGTTgta
ttaaaatttttatcgTTTGCCATTTGAAATAccaaagtaatttttcaaaa
ttgtgcGTGAATGTCTACTATTTCAACATTCTCAATCTTTTGGTTTCTCA
TATAACTTGTGAACAGATTGATTTTGTGCTTGAAAACTCATAAATAACTT
TTTTACAATTATATCTTGTTGGTTGTAAAGTCTTATTTGAAACAATTAAC
AAGATGTGATATTGATATCAATAATAGCCAAGATGAAGAGTCTAAACAAG
AGTGTGAACAAGATGAAGTCGTCGTTtcgaaaaataccaaatttgatgaA
GTTTATTCGGAGAGACTAACAGGTATGAGAAATAATAATTAAACTTACAG
AGAATGTAAATATTAATGCTTAGACTATTGTCAGAAATTCTAAACAATCT
CGGGAATTTTTGTACCAAAATGTTGAAAGATGAAAgagttatttgaattt
tttttttaaatgaacgAGTATCAAGAGAGAAGAATGACAATGGACTGTGA
AAATGTTCTTTTCAATAGATTGGTATCATTCAAAGAAACATCTCCCGAGT
AGACGCAAAATACTCTGTATTGTCTTTGTTGCGAAGAAGTTCATCAGAGG
TGAAGATGACAGGGAATCGACATCAGACAAAACTAACAAAATCAAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055308-exon-scaffold_252-1491911889:21812..22808 | TCONS_00055308-exon-scaffold_252-1491911889:21812..22808 | Clytia hemisphaerica | exon |
| TCONS_00055308-exon-scaffold_252-1510915933:21812..22808 | TCONS_00055308-exon-scaffold_252-1510915933:21812..22808 | Clytia hemisphaerica | exon |
| TCONS_00055308-exon-scaffold_252-1575043694:21812..22808 | TCONS_00055308-exon-scaffold_252-1575043694:21812..22808 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_252 | supercontig | scaffold_252:21812..22808 . |
Blast
The following BLAST results are available for this feature:
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