TCONS_00055321 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055321
Unique NameTCONS_00055321
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1804

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055321 ID=TCONS_00055321|Name=TCONS_00055321|organism=Clytia hemisphaerica|type=transcript|length=1804bp
CGGGAATCCTCTCAAGCGACAAAAACAAGACAAAACCACCAGAAACACTC
ATAGTCTCATATACTATACTATACCTACCATTTGACCATACCAGTACTGA
CTCATACACATCATACGCAACACAACAACTACAGCCAACAGCTTTACTAC
ACAGAACGATCTGGTCCAACAGCTATAACAAAGAAAAGCCTGCTTGCTAG
ATTAAAGGACTTTTATATGCTAGTCTGTTAAAACAGAACTTTATCATGTT
ACGTCTGCAAGCATATCGCAACTTTTCCAAACAAATAAGAAGATTTGTCC
AGCCAGCAGCCTCTTATGAAGAATTCAATGATATTAAGagtgaaaatctt
gaaatccACCATACAAAATATCCAAAAGAAAAGCCTGATCCTGAGAACTT
ACCCTTTGCTAAAATCATGTCTGATCATATGTTGGTGATTGAATGGTTTA
AAGGTTATGGTTGGAGTTCTCCTATTATCAAAACCCATGAGCCACTAATG
TTGCACCCTGGAGCAGGAGCTTTACAATATGGTAGTCAAATTTATGAAGG
AATGAAAGCATATCATGGTGTTGATGGTCAGATACGGATGTTTCGTCCAG
AATGTAACATGGATAGGTTTTGGAAATCAGCTCACAGGATGGCTTTACCA
ACGTTCAACCAAAAAGAATTGTTACAGTGTATTCACGCACTCGTCAATTT
GGAGAGAGACTGGGTTCCAAGACAAGAAGGGAAATCATTATACATTCGCC
CAACTTTGATAGGTTTGGATCCTGCTTCagacattaatgatatcaaACGT
GCCCTTTTGTTTGTAATCACCTCACCAAGCGGCCCTTACTTCCCTGGTGG
TAAGATGCGACCTGTATCTTTACTTGCGAACCCACAACATGTGCGATCAT
GGTATGGTGGTATTGGAGAGGTCAAAGCTGAAACTATGGACCTACATTGT
ATTTACAAAGAGAAGCCATGAGTAAAGACTGTGATCAAGTGCTCTGGCTA
TATGAAGATCAGGTAACAGAAGCAGGAGGCATGAACATTTTCGTTCATTG
GATTAATGACAATGGAGACGAAGAATTACTAACGGCACCATTGAACTCGT
TGATTTTGCCAGGAATCACCCGCCAATCATGCATAGAGATTGCTAAAGAA
TGGgGAAATGTTCTTGTTACGGAAAAAGAATTCACAATTCAAGAAGTCGT
CAAAGCCAGTCATCAAAACAGgaTCAAGCACATTTTTGCTTGTGGTACAG
CAGCTGTGATATGTCCAGTCAATCGATTGGTGTACGAACCCCTTGATGGA
TCCAAAGAGgagTTAACGATTCCGTACGATATGACAGATGATTCGTTGAT
GATGAAACTTTACAATGAACTTTTCAGTATACAGtTTGGTAAGAAGCCAC
ACCCTTGGGTTTACAATGTGAACTAAAAGTAAACACGTCTTGATACCAAA
ACGAGAGAAAGTCTCCTGGTGTTATGGTAATACAAACGAAAAAACTTTGG
TACAtattttttaactgttttttggTAGTTCCCAGAAAGCTGATTGttgt
attttgtcattttttgtagtaattttaatttaaggatttgcttatcaaat
tttcaacattttattttgaagtcttttgtacttttttttatcatccAGTC
ATCCATTCCTCTTCATTGAGAAGAGCCCAATTTTGTAGTGGGTATTTCCA
ACACATTCTCGCActtattttaccaaaaaatacctaaaatatgtcatttc
gttctttgatagttagggttagggtttgtcgttctttttgtcgcttttta
atag
Run BLAST on NCBI

transcript from alignment at scaffold_253:125551..139476+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055321 ID=TCONS_00055321|Name=TCONS_00055321|organism=Clytia hemisphaerica|type=transcript|length=13926bp|location=Sequence derived from alignment at scaffold_253:125551..139476+ (Clytia hemisphaerica)
CGGGAATCCTCTCAAGCGACAAAAACAAGACAAAACCACCAGAAACACTC ATAGTCTCATATACTATACTATACCTACCATTTGACCATACCAGTACTGA CTCATACACATCATACGCAACACAACAACTACAGCCAACAGCTTTACTAC ACAGAACGATCTGGTCCAACAGCTATAACAAAGAAAAGCCTGCTTGCTAG ATTAAAGGACTTTTATATGCTAGTCTGTTAAAACAGAACTTTATCATGTT ACGTCTGCAAGCATATCGCAACTTTTCCAAACAAATAAGAAGATTTGTCC AGCCAGCAGCCTCTTATGAAGAATTCAATGATATTAAGGTACCAAGAAAT TAAATTCAAGTTTAAATTATGCAGCTTTTTTTTACTAAATAGCTACACAC ACTTAAACTTTTTAAACCATCTCAACCCACTCAGCACTCTCAAGATTTGT TTAATCCATATtgccagacgatgtcaatcgaacggaatagaccttttttc aaagaggatgtcctgttgaataattatgtagtccagccataaaaacaatg atagagccatgcataattactgtatcatgNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgcata ttgtaataattatgcatggttttatcattgtttttctgctggactacata attattcaacagggtggcctctttgaaaaaaggtctatcgaacgaaaatt ccaatcgaatGAATCAAAcgcaatacacctttcccgtgattcgtaaaact aatgcgcgcgcattattttgatgctctccaccgtttggtctctggaggta gacaaacccgtttttgcctgcgttcccttagggaaagttggttttttgag cttttcttaagttctgtcgaacaaaattccctcaaattttagtatgttca atctattcatgatattataccaccctgaaaatattttgccaaaagaagat tgctgtcaaaagttagaggctAAAATTCCACTTTCCCTagcccctcgcag gcaaaaacgcattttttacctcccaaacaattttatacacaacagtGGAG CGCACATtctcccgggccatttctgagaactttgaattacgggaaaggtg tatcgaacgcaatcaaatgattgcgattcgattgccgaacgcaatcgaat atcaatcgaacgtaaaattctgggtaaaattcgattgattcgattgatat tcgattacgttcgattgatattcgattacgttcgattacgttcgattacg tttgattgatgttcgattacgttcgattgatgttcgatggggggtcgatt aaattagattccaatttacctcaattcctttcaatttcaagcgcctctta ttagggaggttaagtatcgatatGATAGATAATCAACGCAAGGAACAAGC TTTGACAcacaacctgcagtaaacatgtgggcctgcatgatctgcatttt ctagaatccaggctaaaaagATTCACATCATCTCGTTTAACTCTTCAAAT GTTGAACGAGAATCAACgttaatcaacagaatcaattagtcgaaccagtc gaatgcataagccaaccgaacgtagtcgattgcgtttgattgcgttcaat tgattcggcgttcgattcgttcgattgacatcatCTGGATATTGCCAAAC TAtatcaatcgaacaacttcaaacaaaaattgcaattgaaccaatcgaac gcaatcaaaccaatcgattATAATGGGGCGTAATCGAACGTAATAATATC CAGGGCAAcgcaggggatgtcaatcgaacgtttGATTgccaatcgaatta atcgaatttacttgaatccaatcgaatgattgattcTCGATTACCCGAAT TGATCGAACGCCAATCGAATTCTAATCGAAACCGAAAAACATGTGAAATT CTATTggtttcgattgagttcgacaAGCTTCGATTAAgtttcgatcaact tcgattaacgttcaatcaacttcgattaacgttcgatcaaaTTCGAataa cgttcgatcaacttcgattgactttcgatcaacttcgattaacgcTCTAT CAACttcgattttactttaaaaagtttaaattttgccGGGCTAAATTTAG AAATACCGTTCGTATCCTGTTTCAGCGCTAATTTTGAActtaagatttta tttttatttctagaGTGTCTTTAATTATTACTACTGAGATAGTTCTGTGG GGTTGGTTCCCACGTAATACGCGAGCCGCACTCGATCACACGTAATACGC AAGCCACACTGAATCAACCCGGCGGTTGTTGGATGAAGGGCTTATTGGTG GAGGCGCTTATTTTGAAACTTGAGATTACGGTGCAGCTCTTATATTAAGG GAGGCGCTTAAAACAGGCCGGCGGTATAGAGGAAATACGGAACCACCAAA ATCGAAATTACAAAAAACCGGAACAAAATTTGATCCAACATAAATGGAAt caatcgaatgccaatcgaacatAAATTCAAttaatcgaatgccaatcgaa catAAATCCAATTAATCGAATGCCAATCAAACATAAATTGAATTGATCAA ACATTAATCTAactaatcgaatcaatcgaaaagTATATGCAATCGAAGCT AATCAAAACTAATCGAACGGTAATCGAATCTAATCAAAAAGAGTatgtga aattcgattggcgttcgatcaattcggctaatcgaaaatcaatcattcga ttggcttcgattgattcggtaatcaaatttttcgattgacatcctcTGGT AAAATTGATAGTTGACTAAGTTCGATTGGattgattgattgtcaattaca tttaATTAATCTTCAATTTTGTTTAATTACGATTAtattcgatgagtttg attccAATTAAATTAAATGCCGAATGCTTAAGTACCGTACGAAATCAAAT GTCATTCAAGCAATTGAACGgaaaatcctgggtaatattagATTGtaatt cgattgcgttcaacaatagaccttttttttaaagaggcagccatgttgaa taattatgtactccagcataaaaacaatgatacagccatgcataattact gtatcatgcatattttcaaaattatgcatggctgtatcattgtttttatg ctggagtacataattattcaacatggctgcctctttaaaaaaaggtctat tgaattgcaattatttgattgtgttcaattgtgttcaattgatcCAGAGT TCAATTCGTTTTCTTGACACCGTGTATTGTCCCCATACTTTTGAAACATA CTCAAGTTATTTTGGTGAGGTAACCATTATGTTTGATCTCTNCGCTTGAC ACCGTGTATTTTCCCCATACTTTTGAAACATATTGTCCATTATATACATC CATTATGTTTGATCTCTTTTTTTCAgagtgaaaatcttgaaatccACCAT ACAAAATATCCAAAAGAAAAGCCTGATCCTGAGAACTTACCCTTTGCTAA AATCATGTCTGATCATATGTTGGTGATTGAATGGTTTAAAGGTTATGGTT GGAGTTCTCCTATTATCAAAACCCATGAGCCACTAATGTTGCACCCTGGA GCAGGAGCTTTACAATATGGTAGTCAAGTAAGTTTTGTATTATAGATTGT TTGTAGTTTTTTTGTATTATTTGATGATAATAAGAATAGATATTGTCATC TATAGCTGAAGGTTAGAGTTTCAATCTCCTTTTTGTAGGATTTGAACCCT TTTATTTCCTATATAAGTTGCGCGGTAATCTAAAAAACACTGGATTGGAA GTGACATTTATTGCcagaatttgaaaatgttaaacaggaaaaagaaaaag aaagttaaaagAAGAAAGCTTATCTGTCATACGTAGTGCAAATCTTAAAA CATCACTGTGGCTTTCCTGGTATAGATTCCTCTTCATGTTTTATCTGAAA TATGGCGCAAATTTTAAGGCTACGCTCTTTCTTGCTTTGCAAGGATTAAA GATTCCCTTCTAGTCACtggctttaaactcaattgGTATAGAAGACCACC ATTAAAATCCTATTTTAAAGATGGTGTAGCATGTAAATGGTTTTTTAAGG CAAGGTATAGATTGGTAtaggtttttttttctgttcagTAATAACTGTTT TTCTTTCCTTAGATTTATGAAGGAATGAAAGCATATCATGGTGTTGATGG TCAGATACGGATGTTTCGTCCAGAATGTAACATGGATAGGTTTTGGAAAT CAGCTCACAGGATGGCTTTACCAACGTTCAACCAAAAAGAATTGTTACAG TGTATTCACGCACTCGTCAATTTGGAGAGAGACTGGGTTCCAAGACAAGA AGGGAAATCATTATACATTCGCCCAACTTTGATAGGTTTGGATGTAAGTT TTTTTTCCGTTTGAACGccaaaaggttttgtttttgtttctttatttgAA TCCAAGCTTCGATGATCAAactattaagaacaagttaagaacatttaaag actttttgaaTGTTCTCAAAAAACATAGTGACATCCTATATTTCAGCCTG CTTCagacattaatgatatcaaACGTGCCCTTTTGTTTGTAATCACCTCA CCAAGCGGCCCTTACTTCCCTGGTGGTAAGATGCGACCTGTATCTTTACT TGCGAACCCACAACATGTGCGATCATGGTATGGTGGTATTGGAGAGGTCA AAGCTGGTGGGTATGTTACTAATTAGTTGCCAGATATTTTTTAAGATATT CCACTACAAATCGTATAAAATCGAAAAGTATTTTCAAGTGATTCTTCTCA CTTTTGTACATTTAAAGGAGCGCATTCTTTAATTTGTCATTAATAAAGTC GATATGTTACTGTTAGAATTCTATTTATTGATAATACAGTCAAGTGACCG GTCAAAAGTAGTCTTTTGCAAACTATATTATTTAAGTACATTTTTAGAAA CTATGGACCTACATTGTATTTACAAAGAGAAGCCATGAGTAAAGACTGTG ATCAAGTGCTCTGGCTATATGAAGATCAGGTCAGATAcacgtttttcata agaacacttTTATAAGTACAATACCAGggtcaaaattatcaaaaataaga acaatttaagaccTGTGCTAGTCCTCCAAGTTGAAAGAACTGGGGataaa gcctaaaatacctcaatttcaccCTTTtgataagaacaggataagaacaa tttgaggttcaaaatgtcaaaaaaatgaTAGCCTCGAAGCCTTGTCAAAA ATctactagttcttataaaaatagttATCATGTTTTTAATAACAAAACAC AGTCTAAACAAACTAATCTAATTACCTCCACCAACCAAGAAGTGAAAGTA GTGATAACAATTTATAGAAACTAATAATACTACCTTCTCAAAATAGATAC AGTAAAAGCTTTATGCATGTTTCAAACTAATCAAAATCTTGATAATAATG TCATgcagaaaacaaaaatttaaaaatggttttgtattattttccttttc ctttaTTAGGTAACAGAAGCAGGAGGCATGAACATTTTCGTTCATTGGAT TAATGACAATGGAGGTGTGTGGTTTTAGACTATAGAATCAAAACTAAGAT CATTCATTCTCTGAATAGCAATAGCCGAGCGGTCAAGGTGCCATCAATCA AAATTAGGGGCTCTCctcgctccttccaatgtttcgTTCTGTTCATAGAA AACGGAACCCGTGTGATCCGTGGACCCTgtaaaaacaattgaaagattgt ctaaaagtcctaaatTTCTGGGTTATCCACGTTAAACATCGACTCTGCCT ATCTACCCTGATTCGCacattagtgaggttaagtaaatcggtaaaatcac gacgacgaacgaaaatttaacaggctagtgagtttcaaccaatcaaattt cgtattttcattaGCCttatacatttttcgtccgtcgtcgtgattatccc tGTATGCTAAACCTCAGTATTATCGGGGATTCTGGATGTGCACGCATCAG GCTACTCTAGAAGCGTAGAAAACAGATTAGACAAGGGTCTATATAGTGAT TTTAATCCATCACGGTGATTACAAGCCATACGAATTGGTTTCACGAAAAG AAAATTACGTATCATTTTCATACATgatgaattttgaatgaaattgaATC GAATGATGAAACAAACAAATCAAACAtacaaagaaaatgattttataAAA CACTGGCGTGCATTTAATACCGGTATTAACAATAAATTCTGCACCAAAAT ATCATTCGTTGAAAAAGTACCGCATCATATATAAAAAGAATCCCTGTTGA CACCCATCAACAACCAGAACTTTGCGTTACCTGTATTACAGGAGAGCATT CTTCTTAGAACTAATTGGTTGAAGATATtatattttgtatcatttctaTT TTTAGACGAAGAATTACTAACGGCACCATTGAACTCGTTGATTTTGCCAG GAATCACCCGCCAATCATGCATAGAGATTGCTAAAGAATGGgtaaaatta cattttatcttctgttttaaattttctagAGCTTGACATGTAGATTATGG AAGAAGCTGAAGTCtctaatgttttgattttcaaaaagattttcactTAC AGGTTCTGTACAGGGGTCTGATTAACTTATATATTTTAGGTGACCAGAAA TGAGGCGTTTTCGTACCCTACATGGGTAAGCTTTAAGTTAAGACGGCCGA CCTTCTACCCTGCCAACTTAGAAAGAAAGTTTGCAAATAaattctttgct tgaaaaagattgaacgaagtcattgcattgatgtCAAAAAagatgcattg actttagacagccaattTTTTTGCCCACTTAAATTCATAATTTGAATAGG CAGCGCGAAAAATAGACCGTTTTAGAGCTAATTGAGTGAAATTCTTTTAT CAGTAATTTAGTACTATAGTTCTGTCGAtagcaatagaccttttcataaa ttacgtcacgttCTTCACTTGCCTTGTATTCAAAAAATTACCATGgtgta ataaaatccgctgggagttaatcaccaatAATTGGCAATAATTTCCAAAC GAGGCGAGTGATGTTCGTagcgtaatttatgaaaaggtctattgatgaTA AAATTCtagaattcattttttttaggGAAATGTTCTTGTTACGGAAAAAG AATTCACAATTCAAGAAGTCGTCAAAGCCAGTCATCAAAACAGggttaaa aacttttattgTTAAACTCTGAAAATAATAACTATTTTGATTCAAACAAA ACAGGCAAAAGATTGTGTAAACCAAGAAATTAAAGCGTAAaacacatttt tcttttaaccatatttcgATCTTTATAGATCTTTATGTAATTACTTATGT ACTTATGTATATACCCAAAACATTTTATTACCCAGagcattttaaaaatt attccaAAATTTCAGTGGACCACTTTGACTTTGTTCGCACGTGATGgtaa gccattctattggttgcattcaagtgttacgtcacttctaaccaatagaa tgacttCATTCTGTTTGGGAGCAAAACGGAACTATCACGTGCGAACGTGG TCTTAAGTGAGGAATTTAGGACCGAATGAGACGCGAACTCATCTCATAGT ACTTATAGTAAATTTAATCATTATGCTAGAAACtcattcgaaaaaaataa tttggacTGTTTTACTCTAGTAAATTAAATAAAGGTATCctaacttttca tcttcagaTCAAGCACATTTTTGCTTGTGGTACAGCAGCTGTGATATGTC CAGTCAATCGATTGGTGTACGAACCCCTTGATGGATCCAAAGAGGTTGGT TTAATGAATTATATACTTCGTTTAAAAGCTTCTTTTACATGCGAGGCCGT AAACTTTTGAATTgagatgaaaaaatattttgcatttcTGATAATTGACT GAGGTATATTTTTCCAATGCCGATTGAGATCTTGTTAAGTGTTTGAATTG TTTGAATATTCTTTTTGGCAACTATAATTGCTCTTTTCCTAGATATCCAG AAAAATATTGAGGTTGGAATATCGGACATTTACGgctttttttcaaactg aaaaaaagtATCTACATCACCACTGACTGTGAATAGTTCAATTTATACTG AGAaggaaaaatcgtctgagacgagtagtttgtaaaatgtgatctgtgga ggagatcctatttattgaaacatgaatggaaagtacacataatgttcatt ttctaaattgctcgtctcagacaaattagtcgtctcagtataaatataAC TAATGCGCAGAGAGATAAAATAGCGATGATATTATTTGAATCATCTCCTC CTTATTCTACCGTCATataattaaattaattaaattaaattaccATACAT AGGTGGTTTTAGACCATCTTCCTCTGATTGAAGAAAGTTTTTGGTCCCTT GAGGGTCAACTTGGAGTGGGTCAACTGTACtttgaaaaattcataaattt ctttACATCCTGAGTTAGCGATCTACACTGATAGCGAAGTACAAGGAGCA CCATCCCTGTACTTCGCTATCAGTGTAGATCGCTAACCCAGTACAGTACA GTTGACTCAACCCTACtatagaaaaaaattgcaagtgctttaaaaaagaa atactctacttacaattttgcctagaAATGATAACCTTTGCTATTAAATA CTTTAATAATTCCATATAGAACAAAAGCAATGGTTTTGCATAAATGTAGT TTTAAATATAACCCTTTTTTTCAATAAGGATATTTATGTTAACTATATCG CAACAAGGTCATATTTATCATCCATCTCTGAGAAGGAACTTGTTTCGTGT AATTTCAACGTATCATTTTGTTTCCCTAACAGTCTATCCAAAATTGCTTT TGGATGAGTATTTTCTCTCAGTGTACGTCGACTTCTCATGAACTTTAAAA CATCATAAAACAAACCCAGGGAAACTAAAACACCTACCATACCAACAAAC ACCTTTACAGAGATGTTATTTTCGAATAGCTCTCCAACCGTTCCGATATA GATGGTCTCCATATGACAATGTCTTTCATACTTCGTCTGCATGTAATCAT AAATCTCCTCTCGATTCTTATGCATGCATCTGAGCACTTTGATTAACTCT TGACTAGGCTTACTGCTCATGGTACATCGAATGAAAAGCTGTGCTGGTAA TGTTTGAACAATATGTAAAGGTGGACTTTGACCATCGTGACCGTGGATCT CCTCTTGGTACCACGCAGCAATATCAGCGCTGATCATCGCTCCAAACACT TTCTCTTCTCGCACTAAGTTCAATACTTCTTCGTAAGAGGGTGCGGGAAC TATTTTGGCGGAATAATCTTTCGCCGCCACTTCTGCTTCGTACGAATCCT GTAAAATCATATTCGTGATATTCAcccaccttttcgaccgtagtcacgCA GTCCAGGCGCGtgtcacttaattatttaattaaaaTCCTAAACTCCCTAA TCTCgattcaatccttttttgacacctttttctattgtctataggtgcga aaaaaagactgggaagATTTTAGGGTCGTAAAAGGGACAAAAAattgccc gcgcggcaattgccggctacggtcgaaaaggtgtatgtattaatgatgta atgtttCGTATGGAAGCATCCCAAAAAGACCAggtgtttgccactaattt taaatttaaacaataaaactgATGGCAAACACCCAGGCTATATTTtaggt gcttccgtataaacaTTACGTCGTGAAGGTCACCAACTAGCAATGTAACA CTTGGTTGATTTGACCTGACCTGATGCCGCAGGGCTTTTAGTTCCATATT TCTTAGTTAGCGATATTAAGTTGGGAGGCGGATCAAAGATAAAATTAGGA GGAAGATAGtctttttccccttttttcctTTTCCGTTGGGGGTGTGTAGC TACAAGAAGAGGAGCCTTCAGCTCACCCGATGTGGTCGTAAACTAAGATA TCAAAGAACTGACTAAGAATGAGGATTGGGAGAGCAGAGGCTTTTTAACT AGTATCGATAATTCTTTCATGGCGATTCAGGCctcaattcaaatattttt aattagGCTCTAAGTGTTACTTTATTACCTGTAAAACAGCCATAGATTGT CCGTAAACACCAAGGCTTTCAACACCGGACACCGCATCTGTCATTGTGGC CGTGATCACACAAACCAATAATATTCCTACTATCAACCAAAATAACGCTA TAAAGCGGCCGAGTGGTGATTTGGGTGTGACGTCACCATAACCAACGGTT GTCATAGAAACTACACTCCACCAGAATGTTGAACAAATACCTAAGTGAAA AAATTGGGAATATTAGCCAAGATATTTGAGTTTAAAGACTCAGCTAAAAA AATATCGTAGAATAAGAAAGATCATTGATCTTATAAACCCGAATGTCTCT CCTATAAATCATACTTTTTTCAGTAAGTGCGTTTCAATGCCCATCTTTCA AGCcttatttgaaaatatgaatCTGAATTTTGCTGATTAGATTATGACGT TACCAGGAAATGACAGATTTTCCTCAATCGCAACCAAATTTCAGCTTCAT ATGATTTAtttcaaggttttgagaattttcttcCAAGCTGTATAAAGACG GAATTCTGCACGAatcaaaaatcatatttttagtGTAGGCGAAAGAACTA CCATCTTTTGGCACAGGGTTCCACTGCCACTTTTCTAGcagaaaaagacc aggactctGGATATAGTGAAAAAATGAGCTTCGGAAAAATAAGCCAtaca tttagaaaaaaaaaacctttccaaaATCATGCCGATAATCCCGGAAATCT GGAAATTTTCTGGAAAGTTAAATGGATCTTAGTCTGCCAAATACAATGTT ATGGTAAGCGACGATAAGTTCCTAAGCCTAATTAATAAAATAATACCAAC CTAAAACAAACGATCGTTCAACATTCTCATTCCAAATCCGTTCAACGAAC CAGATGAGAATACTGAAAAAGATGGCCATAGGAATCACaatgacaaaaat aattttagtactaGCTATTCCTCGTAAGATTTTATGTGGCAAATCGATCA TTTTACGTGGGAGGATGAccaccattttgtttgttttcattaGGGAGAAG GATCGAAGTGTGTTTTCATTCTCCCATTCATCACCCATCTCTTGCATCTG TGGCGAAAGAAAGATTTCACCTTCTTTGATCCCTGTCAGATAATCTTTGC CGTATGGGAACCCCTTCTTAATGTTTTGAATAAAGTCTTTCCTAGATTCG AATTTCTTCACAAAATCGATTATAGTGACGTTTGGGTTTGGATTACAAAA GGAGTTAGCTCTTGTGAATATCTTCGGAATGATTCCATCGATTTCGCCAC GGTCGTTTGTGAACATGTATGGTTTGACTTCCCAGAATACACCTTTCATC AGTGATGATTTGGTGGTCGTAAGGTTTTCAGCTAGCGAAAGTGTGGTGGT CTTAGCGTTTTCAGCTAGTAATTGTGTGGCGCTCGTAGTGTTTTCAGCTT TTGATGACGTGGTGGTGTTCATAGTGTTTTCGGCTTGTGATGACGTGGTG GTCGTAGCGCTTTCAACCAGTAATGGTGTGGTGGTCGTAGCGTTTTCTGC TAGTAATGGTGTCGTGGTCGTAGCGTTTTCAGCTAGTGAAGGTGTGGTGG TTGTAGCGTTTTCTGCTTGTGATGGCGTGGTGGTCGTAGCGTTTTCTGCT AGTGAAGGTGTGGTGGTTGTAGCGTTTTCTGCTTGTGATGGCGTGGTGGT CGTAGCGCTTacagcttgttttgattttaaaatcaaaagttgtaacaaaa ttGATAATAGCTTCATTATGATGGATTATCAAGTCAGTATCAAAACTTAT ACAAGCCTCACTCATAATAACCTGATTTCCAAATTGAATTAGTCAAGAAA TTTTATGATCATAAACTTGTATAGAGTTTATGTTTGGGAGgttgatttta tattttatcaAGTTAAGCCAATTTATTATTGATAACTTCCAAACAAGTCT GTCAGTCTTTTAGTAGCGGGTGATCGACtttgaattagaaaaaactacGG AAAGTTTGTTTGAAAGGATAAGGTGACACTGTGAGCTAAGTTCAAATTTG TTGTAAAGTAACTTGTTAATATTGATTAGAAAAATGATGAGGAAAATATa caaatcgaaaatttttctttacCTCCAAAGAGAAAGAAATGTTAGCCTGC TATTTTTAAACTGGTTTCTATTTCCCCATACCGATGTgtgtttttaaaag aataaacCTTTTTCtcagaacatccaacatttttgggGCCTTCGgatatt ttaacgttttcagTACGAACCCTAAATATaatcctaaaaatgtttttatt ttcaccatcttgtgagtatttttgtagtattttcctaaaaaattggaaac ttgttcttgatatttagctatcgaagccttatgttatcATATTGTTCTAA CAATGCTGAAAATTCCTATTCTcttaaatggagaaaaaaagttttattga gtttcattttttatttttccaggagTTAACGATTCCGTACGATATGACAG ATGATTCGTTGATGATGAAACTTTACAATGAACTTTTCAGTATACAGGTA TGTTCGCATTGACATTCAGAAATTCTAAAactattctttcttttttacag TACAAAGAAAAACTGTTGACAAAACCCGCTAAATGTGTTGGGGCGTTTCC TGGAGGTTCCGTAATgaatactttaagggcagaaactttcacaatttttc acgatttttgccctttttcgcgaaagtttctgccaagtaaaaaattgcat taattaaatttgcgaaagttttttcgtttttttgctatttcatacataat caccatggtaattgtttcaatacgaggcaagtgatgttcgtgacgtaatt tatgaaaaggtctactctattgtttaaaagtcctagattactgagCTATC CGCGTAAAATGTCGAACTCGTCACGATGTCAAAATGAGCAATTAACTCTA TGTACCGGAGGTGGGTACAAGGGTTGGCAAATGAGGAGTGAGGGGGGTTT TACGAACCATAGAGGGActactttaaatttttctgatttttgtaaccctt agaaagactttgTAAGGTTAAAAAACCGAACCCTTATTGTCAGCACATAC CCAGTACCTCCTCCTCCCTTCACCAGGCTCTATGACTTCATGCTGGTTAA TTTGACGAGAAAGAGATTACTTTCCTTTTTCTTCCTCTTCATTTTCCGTT CAGTTTATCAATACCCAAGTCGGCTGGCCGTGGCTCCGTACAAACTAACG AATAAGTCTCAGAATTTTGGGTTATCAACATAAAATCTAAACTCATCTCG ATACCAAATTGAGTAAATTTCTGCCTTCATGTCGGTTAATTTGACGGGAC AGAGATCCTGTATTTCTCTGAAaacccaattcaaaattttcttttcattt ttgtagtTTGGTAAGAAGCCACACCCTTGGGTTTACAATGTGAACTAAAA GTAAACACGTCTTGATACCAAAACGAGAGAAAGTCTCCTGGTGTTATGGT AATACAAACGAAAAAACTTTGGTACAtattttttaactgttttttggTAG TTCCCAGAAAGCTGATTGttgtattttgtcattttttgtagtaattttaa tttaaggatttgcttatcaaattttcaacattttattttgaagtcttttg tacttttttttatcatccAGTCATCCATTCCTCTTCATTGAGAAGAGCCC AATTTTGTAGTGGGTATTTCCAACACATTCTCGCActtattttaccaaaa aatacctaaaatatgtcatttcgttctttgatagttagggttagggtttg tcgttctttttgtcgctttttaatag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034853XLOC_034853Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055321-exon-scaffold_253-1491911889:125551..125888TCONS_00055321-exon-scaffold_253-1491911889:125551..125888Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1510915933:125551..125888TCONS_00055321-exon-scaffold_253-1510915933:125551..125888Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1575043694:125551..125888TCONS_00055321-exon-scaffold_253-1575043694:125551..125888Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1491911889:129027..129227TCONS_00055321-exon-scaffold_253-1491911889:129027..129227Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1510915933:129027..129227TCONS_00055321-exon-scaffold_253-1510915933:129027..129227Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1575043694:129027..129227TCONS_00055321-exon-scaffold_253-1575043694:129027..129227Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1491911889:129763..129993TCONS_00055321-exon-scaffold_253-1491911889:129763..129993Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1510915933:129763..129993TCONS_00055321-exon-scaffold_253-1510915933:129763..129993Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1575043694:129763..129993TCONS_00055321-exon-scaffold_253-1575043694:129763..129993Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1491911889:130147..130306TCONS_00055321-exon-scaffold_253-1491911889:130147..130306Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1510915933:130147..130306TCONS_00055321-exon-scaffold_253-1510915933:130147..130306Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1575043694:130147..130306TCONS_00055321-exon-scaffold_253-1575043694:130147..130306Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1491911889:130548..130629TCONS_00055321-exon-scaffold_253-1491911889:130548..130629Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1510915933:130548..130629TCONS_00055321-exon-scaffold_253-1510915933:130548..130629Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1575043694:130548..130629TCONS_00055321-exon-scaffold_253-1575043694:130548..130629Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1491911889:131110..131164TCONS_00055321-exon-scaffold_253-1491911889:131110..131164Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1510915933:131110..131164TCONS_00055321-exon-scaffold_253-1510915933:131110..131164Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1575043694:131110..131164TCONS_00055321-exon-scaffold_253-1575043694:131110..131164Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1491911889:132006..132091TCONS_00055321-exon-scaffold_253-1491911889:132006..132091Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1510915933:132006..132091TCONS_00055321-exon-scaffold_253-1510915933:132006..132091Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1575043694:132006..132091TCONS_00055321-exon-scaffold_253-1575043694:132006..132091Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1491911889:132726..132794TCONS_00055321-exon-scaffold_253-1491911889:132726..132794Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1510915933:132726..132794TCONS_00055321-exon-scaffold_253-1510915933:132726..132794Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1575043694:132726..132794TCONS_00055321-exon-scaffold_253-1575043694:132726..132794Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1491911889:133308..133394TCONS_00055321-exon-scaffold_253-1491911889:133308..133394Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1510915933:133308..133394TCONS_00055321-exon-scaffold_253-1510915933:133308..133394Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1575043694:133308..133394TCONS_00055321-exon-scaffold_253-1575043694:133308..133394Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1491911889:138123..138197TCONS_00055321-exon-scaffold_253-1491911889:138123..138197Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1510915933:138123..138197TCONS_00055321-exon-scaffold_253-1510915933:138123..138197Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1575043694:138123..138197TCONS_00055321-exon-scaffold_253-1575043694:138123..138197Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1491911889:139057..139476TCONS_00055321-exon-scaffold_253-1491911889:139057..139476Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1510915933:139057..139476TCONS_00055321-exon-scaffold_253-1510915933:139057..139476Clytia hemisphaericaexon
TCONS_00055321-exon-scaffold_253-1575043694:139057..139476TCONS_00055321-exon-scaffold_253-1575043694:139057..139476Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:125551..139476 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0.665079 tpm) - - (14.9917 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.4115 7.99897 0.764519 0.665079 2.99136 5.08138 8.1098 6.75009 8.33071 5.70261 13.924 10.3633 7.0284 6.2738 5.09001 6.5743 4.30608 5.59679 3.57015 4.69334 5.17845 5.06613 11.3219 14.9917 4.58067 4.23372 3.43451 6.75892 8.21897 8.48039
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055321 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
20040060080010001200140016001800Expect = 1.79e-92 / Id = 48.26Expect = 1.79e-92 / Id = 48.26SequenceBCAT2
Match NameE-valueIdentityDescription
BCAT21.795e-9248.26Branched-chain-amino-acid aminotransferase, mitoch... [more]
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