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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055322 ID=TCONS_00055322|Name=TCONS_00055322|organism=Clytia hemisphaerica|type=transcript|length=546bp
CTCTGAAATATTTTCGACAACACGATGACTTAACCAATTCAACAATTCAA
TATTAACTTAATgcgaaaaatcgggaaaaaaattgaaaaaaggaaaCATT
GATGTATAAGAAATTCCTTTTGATCAAAATCTTATGTGAAAAACGAAGcc
cattttaatttcaaaattgggtTCGGGGAAAATGAATTGCTACTTCCTgg
taaatgttttgatatttttggtttttgtgaCAAGAAGTTGTTACAGTTTG
ACTCAAGGTGCTGCGGAGGCATGGCGGTTTGGTAAGAAAAGAAGTGATGA
GAGAAAATTTGATCTTGCTATCTCAAAGAATGTAAAGCTTTTAGAAAGGG
TACTCAAAAACACGAAGCTTGATACAGTCGACAAACGTGATCACCAAAGC
Atcgaacaaaagaaaagaatcaaaaagcgacgttgaatctgaaaattatt
GGCAGTTTTTTGATGACATTTTATTTGCATTGAAAATatatcatattttt
gaaaatttagaatcAGCAACCTTACAATCAATATTATTACTTAATG Run BLAST on NCBI transcript from alignment at scaffold_253:141005..142083+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055322 ID=TCONS_00055322|Name=TCONS_00055322|organism=Clytia hemisphaerica|type=transcript|length=1079bp|location=Sequence derived from alignment at scaffold_253:141005..142083+ (Clytia hemisphaerica)
CTCTGAAATATTTTCGACAACACGATGACTTAACCAATTCAACAATTCAA
TATTAACTTAATgcgaaaaatcgggaaaaaaattgaaaaaaggaaaCATT
GATGTATAAGAAATTCCTTTTGATCAAAATCTTATGTGAAAAACGAAGcc
cattttaatttcaaaattgggtTCGGGGAAAATGAATTGCTACTTCCTgg
taaatgttttgatatttttggtttttgtgaCAAGAAGTTGTTACAGTTTG
ACTCAAGGTGCTGCGGAGGCATGGCGGTTTGGTAAGAAAAGAAGTGATGA
GAGAAAATTTGATCTTGCTATCTCAAAGAATGTAAAGCTTTTAGAAAGGG
TAAGATTTATCTAAATCTTTTGATGTATAGTGGAAGCTGCCTTCAACTGC
CATATAGCATactcctgtctcacagtcccAGAGATCTTTTTCCCATAGTG
GGGATGAAAGTATCTATCGAAATCCAaacggggataaaaaaatttaatgt
tcCATGAGTCAATTTCCCAATGGGGCTGACTGTAGTGTATTTTTCCCAAG
GGGGACGAGAAAttagccaaattttccaaacGAGGTGGGGGAGTCCCACC
AGGGGTGTCATATAGAAGCACTGCCctaatattgaaaaaaatagacGACG
AAATAGACTTCCCCCAATAAGTTCACTGAGGTTTCTTTGTGGGTAGAAAG
ATGAGTAGTTAACCATTCCTATTTAAAATAAGGCTTTGGTCTCAATAATC
TACGATTGGCAAAATATTGATGTTGTCTGTACCAATTTGTTACTTAAGTT
CACTCGGCCCAAagaggttttttttaattcactgATTAAATTTATTCCAA
GGCAAAAGTATTTTTTCTTCTCATTTTTTTAGGTACTCAAAAACACGAAG
CTTGATACAGTCGACAAACGTGATCACCAAAGCAtcgaacaaaagaaaag
aatcaaaaagcgacgttgaatctgaaaattattGGCAGTTTTTTGATGAC
ATTTTATTTGCATTGAAAATatatcatatttttgaaaatttagaatcAGC
AACCTTACAATCAATATTATTACTTAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055322-exon-scaffold_253-1491911889:141005..141353 | TCONS_00055322-exon-scaffold_253-1491911889:141005..141353 | Clytia hemisphaerica | exon |
| TCONS_00055322-exon-scaffold_253-1510915933:141005..141353 | TCONS_00055322-exon-scaffold_253-1510915933:141005..141353 | Clytia hemisphaerica | exon |
| TCONS_00055322-exon-scaffold_253-1575043694:141005..141353 | TCONS_00055322-exon-scaffold_253-1575043694:141005..141353 | Clytia hemisphaerica | exon |
| TCONS_00055322-exon-scaffold_253-1491911889:141887..142083 | TCONS_00055322-exon-scaffold_253-1491911889:141887..142083 | Clytia hemisphaerica | exon |
| TCONS_00055322-exon-scaffold_253-1510915933:141887..142083 | TCONS_00055322-exon-scaffold_253-1510915933:141887..142083 | Clytia hemisphaerica | exon |
| TCONS_00055322-exon-scaffold_253-1575043694:141887..142083 | TCONS_00055322-exon-scaffold_253-1575043694:141887..142083 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_253 | supercontig | scaffold_253:141005..142083 + |
Blast
The following BLAST results are available for this feature:
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