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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055342 ID=TCONS_00055342|Name=TCONS_00055342|organism=Clytia hemisphaerica|type=transcript|length=2737bp
tgctgcacaaaggaagttctatagaagtttgtttttggttgtttttttca
agttcaaagacgcCCGTTTGGCAATGGGGCCGTTTGTGCACTGGTGACCC
CCCTCTACTGCAATTTTTCGACAACATTGCAAATTTTTTCATGTACAGCA
CCATTCATTTCACCACGAAAGCTGAGGTTTTCAGGTTAGTCAATTCTTAC
CTCTTCTCCTTCATCTTTAATATCTCCAGTTTGATGTTTGTTGTTTTCTG
TCCCTAGTCCAGTAGCATCTAAATCAATATCATTCTCTCTTCTCTGTTCT
TCTTCGTCTGCTACCTCctcctcttcttcttcatccTGTCCTGAcaattt
tccattttcaagCGGGTGCTCTTCAGTATCCTTCAGGAATGAATGTCTAG
TGTGaaccattttgattttattataaaGTAATTTACTTCAAACTATTGAA
TCTTAAAATTACAAACTCAAATTTTAATAATACTTCATTTTTGCAGTTCG
ATGTCGTCCATTTTGGTTGTTTGCGTGAGGTCTAGTCCAAGTTAGTGATA
TTGAGTTTGTCCCTTTTCTAAATGCGTTTTTAAGCGACAACTTGGTTAAT
ActagaaaaagcgcgggaaagGTTGTCTTGACTAGCAAACTTTCGTTTAC
AAAACAGTGATGAAAACCATTGGATGATCAAGAACATTTCTAAGAATTGA
GAAAGTGTCTAATCACACGCATGCGCGAGCGTACTTTGTTTTGAAGTTGt
catttactttcgatttcatcCATTCCCAACCCAAAGATTTTTCGCGACGT
GTGTTTCATAAGATTTCGAACAGTGAACATtccttttttatcattttaaa
agGCAACGATGGTAAAGTTTTCAAAGGAGAAAGTATTAGAGAGTGCTGAA
GAGTTGGTCAAATTTGTGAATGGAAGTCCATCGCCATATCATGCAGTTGA
TCAGTGTATTCAAAGATTGGACGCATCTGGATTCCAACGCTTAGATGAAA
GACATTCTTGGGAGCTTGCCAAAGGTGGTAAATATTACCTCACCAGAAAT
GACTCCACAATCTTCGCTTTTGCTGTTGGTAAGAAATTTGTGACAGGGAA
TGGTGTTTCGATGGTTGGTGCTCATACCGACAGCCCTTGCTTTAAATTGA
AACCTAAATCTAAACAAGAAAGCGAAGGATGTCTTCTTGTTGGAACACAA
TGTTATGGAGGTGGTATCTGGCATACTTGGTTCGATCGAGATTTGGGAGC
AGCTGGTCAAGTCATTGTCGAAACTGAGGAAGGGAAATATGAATCGAAAT
TATTTCGAATCGACGATCCAATCCTTCGTGTACCAAACATTTGTATTCAC
TTGAACCGAACCATGAAtgataatcattcagtcaacaAGGAGACGCAAAC
ACCTGCTGTTCTAGCCACCAAGTGTATAGATGAAGAGATGAACGAATTTG
TCAACAGTGATGAGAATACAGCGGCTGGAAAACATCACGGTGCATTCATT
GAACGCATTTGCTCCGTTTTGAGTTGTAAACCAGAACAAatcattgattt
tgatatttgtttaGCAGATACGCAACCAGCAGCTATTGGGGGTGTACATA
AAGAGTTTATCTTTTCACCACGATTAGATAACTTATTCAATGCGTACACT
TCACTTCAAGCATTAATCAACTCATGTGTTGATCAGAAAAGTCTGGATGA
TGAAACCAACATTCGTATGATTGCATTGTATGATAATGAAGAGGTCGGCT
CTCAAAGTGCACAAGGCGCCGGTTCGGCTGTCACCGAATGGGTATTACGA
AGAATCTGCCAATGTTTTGGTGGTGCATTTGAACAAACCATCGCTAACTC
CTACTTATTGAGTGTTGATCAAGCTCATGCTGTACATCCAAACTATGCCG
CAAAACACGAGAATAACCATAAACCACAACTTCATAAGGGAATTGTTATC
AAAACTAACGCCAACCAACGATACGCCACGACTGCCATTACTGGCAGTAT
CATTCGATTGATCGCCAAGAAATGCGGTGTTCCTTTACAAGATGTTGTCG
TTAGAAATGATTCTACGTGCGGATCTACCATTGGTCCAATCATGTCCGCA
AAACTAGGCGTCCGAACACTGGATATGGGTGGACCAATGTTGAGTATGCA
TTCTATCCGCGAACAATGTTGCACTACAAGTGTTCAACAAGGGGTCACTT
TGTTCCATGCGTTCTTTGAAGAATTCCCTGGTATCGACCGAAACCTCAGT
GCGAATTAATTCGAACAATTTTTACAAGCACTTGTTGGGAATGATTGTAA
ATGTTGATTTGAACTGATTGATATATTttagtattttattattttttagt
attttatgatattttgcttGCAAGAAACcaactttaaaagttttttaaaa
cccGACGTAATATAAAGGAATTTATTAGCCAGTTTTACAGcattcaatgt
ttcaatttttaagttcactattaaagaaaattaaaacgtCTAGATTTGAT
CTATTAGCACAAAATAAAACTTGCAGAAATAACCAATTGTGCATTATGGG
TCTGAGTATTTTGTCTTTCGATCTATAACGAGgttgagaaatttgaaatg
aagGGCTTTGGATAACATTAATATTCTAATTTCTTGGTATTTAATTTCAC
TTTCTGataattttcatgttttgatttttaacttttaattgGACAGTTTT
TGTAACATATttgatgaataaaaaattaatatttctt Run BLAST on NCBI protein sequence of TCONS_00055342-protein >TCONS_00055342-protein ID=TCONS_00055342-protein|Name=TCONS_00055342-protein|organism=Clytia hemisphaerica|type=polypeptide|length=466bp
MVKFSKEKVLESAEELVKFVNGSPSPYHAVDQCIQRLDASGFQRLDERHS
WELAKGGKYYLTRNDSTIFAFAVGKKFVTGNGVSMVGAHTDSPCFKLKPK
SKQESEGCLLVGTQCYGGGIWHTWFDRDLGAAGQVIVETEEGKYESKLFR
IDDPILRVPNICIHLNRTMNDNHSVNKETQTPAVLATKCIDEEMNEFVNS
DENTAAGKHHGAFIERICSVLSCKPEQIIDFDICLADTQPAAIGGVHKEF
IFSPRLDNLFNAYTSLQALINSCVDQKSLDDETNIRMIALYDNEEVGSQS
AQGAGSAVTEWVLRRICQCFGGAFEQTIANSYLLSVDQAHAVHPNYAAKH
ENNHKPQLHKGIVIKTNANQRYATTAITGSIIRLIAKKCGVPLQDVVVRN
DSTCGSTIGPIMSAKLGVRTLDMGGPMLSMHSIREQCCTTSVQQGVTLFH
AFFEEFPGIDRNLSAN Run BLAST on NCBI transcript from alignment at scaffold_253:380378..386239+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055342 ID=TCONS_00055342|Name=TCONS_00055342|organism=Clytia hemisphaerica|type=transcript|length=5862bp|location=Sequence derived from alignment at scaffold_253:380378..386239+ (Clytia hemisphaerica)
tgctgcacaaaggaagttctatagaagtttgtttttggttgtttttttca
agttcaaagacgcCCGTTTGGCAATGGGGCCGTTTGTGCACTGGTGACCC
CCCTCTACTGCAATTTTTCGACAACATTGCAAATTTTTTCATGTACAGCA
CCATTCATTTCACCACGAAAGCTGAGGTTTTCAGGTTAGTCAATTCTTAC
CTCTTCTCCTTCATCTTTAATATCTCCAGTTTGATGTTTGTTGTTTTCTG
TCCCTAGTCCAGTAGCATCTAAATCAATATCATTCTCTCTTCTCTGTTCT
TCTTCGTCTGCTACCTCctcctcttcttcttcatccTGTCCTGAcaattt
tccattttcaagCGGGTGCTCTTCAGTATCCTTCAGGAATGAATGTCTAG
TGTGaaccattttgattttattataaaGTAATTTACTTCAAACTATTGAA
TCTTAAAATTACAAACTCAAATTTTAATAATACTTCATTTTTGCAGTTCG
ATGTCGTCCATTTTGGTTGTTTGCGTGAGGTCTAGTCCAAGTTAGTGATA
TTGAGTTTGTCCCTTTTCTAAATGCGTTTTTAAGCGACAACTTGGTTAAT
ActagaaaaagcgcgggaaagGTTGTCTTGACTAGCAAACTTTCGTTTAC
AAAACAGTGATGAAAACCATTGGATGATCAAGAACATTTCTAAGAATTGA
GAAAGTGTCTAATCACACGCATGCGCGAGCGTACTTTGTTTTGAAGTTGt
catttactttcgatttcatcCATTCCCAACCCAAAGATTTTTCGCGACGT
GTGTTTCATAAGATTTCGAACAGTGAACATtccttttttatcattttaaa
aggtaagaattgatatttttaaatgtcTAAAAAATTGACTAGGTAGGTTT
AAAACAGTTAGGTTTGGGATTCGAAAACAACTTGGAGCTGTGTGCAAACA
GTAAACTAGAGCTAGACTAAtcaccagacggtgtcaatcaaaagaatcga
acgccgaatcaatcgaataattgcaattcgattgtcgaacgcaatcgaat
cgcaatcgaatattacccaggatttaatgttcgattgcttcgattacgtt
cgattgtattcgattacgttcaattgtattcgattacgttcgattgattc
aattgtattagattttattcgctttagtNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNacaatcaatcgaaccaatctaacct
tactcgaacgcaatcgaacacaatcgaatattacccaggaattggccgtt
cgattgagattcgattacgttcgataatcgaatctcaattattcgatcgc
attcgattgcgttcgattggttcgattgcaatttttgttcgaaattgttc
gattgacatcgtctggtaaTCAGGTAGCTAGTCCAGAAGTTAGCTACTTT
ACTACTAATCAATAAGATTGATTATCAATTAAAATTGATAGCTAATCGAT
AATGAATCGATTGATTAAATAttgattagtatatgtaatcacatgataac
gagtgcaattcgaatataattgcaagagtgatttttttgctattaatttt
ccgagtccgaaaggacgaggaaaattcgaaacaaaaaaatcacgagtgca
attttcgaattgtacgaggtGGTGGATTGTTACGTGGTGGTAACAATTCC
TAGTTTTTCGAACCATTTTGAGCCttaagttccttataaacgtgttcctt
ataaaaaatgtgtagtttTGACGATACAGCATCTCAAAGATGGGCTatta
agcgaaaattgacccctaaaaatcatgagcTCTGAAAGCATAAAGCTGAt
ctacagtggatttcaagaactttttgcaggaaatcagaaaaaatcaaatt
aggtttctaaaattttcccagaaaatctctagcaccttttggaagcactt
ttagctgtctgctgatggtccttgtgaCTTATTTGAAGCAAACTTTAGAC
CCGGAGTGATTTAGTGGTGGGTTTTGACCAcataaataacattttcagga
tttttaacTTTGCATAATcatcaaaaatggccgaaaaaattgctatttcg
gcagatctggagcaaaattcaagatagCGTATCTTTTTGCAGTGACAACA
AATTTTCAGACAAACTTTCAGTAAGGCTTCCTTAATATAGGTCTAGTTTA
AAGCCTCTCAGTGGATGGAaatctcttaaagatatgatcgattgaaaatt
tgcttaacttcatTGTTTATTTcctcttaaaatgctaaatcaggtccact
taagggctctaaaggtTAATTCTTGTCGAAATATTGGTTGATCATatcta
gccaactaatcattggcattaagggaacaactgcaaaaaaatttaggtca
tttcgatcaatagattaaattttatgACAGTTTCACcttaaatataagca
ggttacttcgactaaatgggtttaacagtaaaaatcctattcaaaaactt
tttagactaaTTAGGAAATCCTACTTATTGACCATAATTCAACTTTACCG
CAAATTTTGtaagtccaagtgtcgtgattaGCTTTAGACTGTCATTACTT
CTCAGTGCTTTATCATCTTCAATTCCCCGAAGAAAGATTtgatttgatgc
gagagttagttGACATCAAAGTGGCAAAAAATCCTTGAATGGAAGAAGAA
TTTACGAtcattaatattttcattttaaagttttggtgcaaaaaaatgaa
atatgcaAGCACTTCGTTGCTAAGATGTAGGCTTGAAGTCGAAactgaaa
ccactgaaaacaaaagtaaaatcagcCCACACGCTCCAAATCTCGTAATT
TTGATATGAGAGTTTTAGTCTTAACTGATTAACGGATAATGATAACTGAA
TAGTTATTTGGGAGAACACAacagtctattgaataacaaattactctaGC
ATACATTGCTGTAGCTTAACCAGTGTGAAACCAAGATGAATTATCTTATC
CCTAGGTTCCAACTGTGTTGGAATAGACAAATGAGTTGTATGAAGTTATC
ATTAACAAAATTTatgctggagtaattagttattcaaaaggcCATCATAT
AACTGATTTGATCTATTTCTTATACAAAACTAACATATTTTCTTATTATG
AAGAACGAAATACTTGTCAAGGTGAATTTTAAATTAAGttattcaaattc
ttatttatgtgacgtcatcatgaaaattggctgaaaattaggttttttca
aaatcttgtgATTTTTCGGAAAGTGGGACTATCTGACCATGCCCATACCA
TTTTTTATATCGaaatgctttgaaaaaaccTAATAAAACATTTATGTTAA
GGGGCGGAAACTCATGTGACTGTTGGGGGTTGCCTTAGGTCCCAGAGTGT
GAAAAGTTTCCCATAAGTTTCTTATGTACTTCACTACCAGTTGCATAATT
GGATAAGGGGTACTTACAGGCTTACTTTTACTATTTCTTAAAAAGcttga
agtttttgaaaatcctaGGTTTGGGGGAATTTTCCTCTGACCTGACCTGA
GATAACCTCACCCAGtatgaaaacttttttgtttaaaattgttCAATTAT
CTTTCAGGTGTAAACTAAATTACTCTTTTTGCTGTCTGGGAGCCCTCTGA
ACAAGTTAAAGATCTTGCGTTTATTTTGCCAATCTCAGATACTGAATTCC
AAATGCCTAACTGTGGTGAATATTCACACGAATGATGCTCATCTTTGAAA
TGTCTCAAACTTTGTTTTTCTATACAGGCAACGATGGTAAAGTTTTCAAA
GGAGAAAGTATTAGAGAGTGCTGAAGAGTTGGTCAAATTTGTGAATGGAA
GTCCATCGCCATATCATGCAGTTGATCAGTGTATTCAAAGATTGGACGCA
TCTGGATTCCAACGCTTAGATGAAAGACATTCTTGGGAGCTTGCCAAAGG
TGGTAAATATTACCTCACCAGAAATGACTCCACAATCTTCGCTTTTGCTG
TTGGTAAGAAATTTGTGACAGGGAATGGTGTTTCGATGGTTGGTGCTCAT
ACCGACAGCCCTTGCTTTAAATTGAAACCTAAATCTAAACAAGAAAGCGA
AGGATGTCTTCTTGTTGGAACACAATGTTATGGAGGTGGTATCTGGCATA
CTTGGTTCGATCGAGATTTGGGAGCAGCTGGTCAAGTCATTGTCGAAACT
GAGGAAGGGAAATATGAATCGAAATTATTTCGAATCGACGATCCAATCCT
TCGTGTACCAAACATTTGTATTCACTTGAACCGAACCATGAAtgataatc
attcagtcaacaAGGAGACGCAAACACCTGCTGTTCTAGCCACCAAGTGT
ATAGATGAAGAGATGAACGAATTTGTCAACAGTGATGAGAATACAGCGGC
TGGAAAACATCACGGTGCATTCATTGAACGCATTTGCTCCGTTTTGAGTT
GTAAACCAGAACAAatcattgattttgatatttgtttaGCAGATACGCAA
CCAGCAGCTATTGGGGGTGTACATAAAGAGTTTATCTTTTCACCACGATT
AGATAACTTATTCAATGCGTACACTTCACTTCAAGCATTAATCAACTCAT
GTGTTGATCAGAAAAGTCTGGATGATGAAACCAACATTCGTATGATTGCA
TTGTATGATAATGAAGAGGTCGGCTCTCAAAGTGCACAAGGCGCCGGTTC
GGCTGTCACCGAATGGGTATTACGAAGAATCTGCCAATGTTTTGGTGGTG
CATTTGAACAAACCATCGCTAACTCCTACTTATTGAGTGTTGATCAAGCT
CATGCTGTACATCCAAACTATGCCGCAAAACACGAGAATAACCATAAACC
ACAACTTCATAAGGGAATTGTTATCAAAACTAACGCCAACCAACGATACG
CCACGACTGCCATTACTGGCAGTATCATTCGATTGATCGCCAAGAAATGC
GGTGTTCCTTTACAAGATGTTGTCGTTAGAAATGATTCTACGTGCGGATC
TACCATTGGTCCAATCATGTCCGCAAAACTAGGCGTCCGAACACTGGATA
TGGGTGGACCAATGTTGAGTATGCATTCTATCCGCGAACAATGTTGCACT
ACAAGTGTTCAACAAGGGGTCACTTTGTTCCATGCGTTCTTTGAAGAATT
CCCTGGTATCGACCGAAACCTCAGTGCGAATTAATTCGAACAATTTTTAC
AAGCACTTGTTGGGAATGATTGTAAATGTTGATTTGAACTGATTGATATA
TTttagtattttattattttttagtattttatgatattttgcttGCAAGA
AACcaactttaaaagttttttaaaacccGACGTAATATAAAGGAATTTAT
TAGCCAGTTTTACAGcattcaatgtttcaatttttaagttcactattaaa
gaaaattaaaacgtCTAGATTTGATCTATTAGCACAAAATAAAACTTGCA
GAAATAACCAATTGTGCATTATGGGTCTGAGTATTTTGTCTTTCGATCTA
TAACGAGgttgagaaatttgaaatgaagGGCTTTGGATAACATTAATATT
CTAATTTCTTGGTATTTAATTTCACTTTCTGataattttcatgttttgat
ttttaacttttaattgGACAGTTTTTGTAACATATttgatgaataaaaaa
ttaatatttctt Coding sequence (CDS) from alignment at scaffold_253:380378..386239+ >TCONS_00055342 ID=TCONS_00055342|Name=TCONS_00055342|organism=Clytia hemisphaerica|type=CDS|length=1401bp|location=Sequence derived from alignment at scaffold_253:380378..386239+ (Clytia hemisphaerica)
ATGGTAAAGTTTTCAAAGGAGAAAGTATTAGAGAGTGCTGAAGAGTTGGT
CAAATTTGTGAATGGAAGTCCATCGCCATATCATGCAGTTGATCAGTGTA
TTCAAAGATTGGACGCATCTGGATTCCAACGCTTAGATGAAAGACATTCT
TGGGAGCTTGCCAAAGGTGGTAAATATTACCTCACCAGAAATGACTCCAC
AATCTTCGCTTTTGCTGTTGGTAAGAAATTTGTGACAGGGAATGGTGTTT
CGATGGTTGGTGCTCATACCGACAGCCCTTGCTTTAAATTGAAACCTAAA
TCTAAACAAGAAAGCGAAGGATGTCTTCTTGTTGGAACACAATGTTATGG
AGGTGGTATCTGGCATACTTGGTTCGATCGAGATTTGGGAGCAGCTGGTC
AAGTCATTGTCGAAACTGAGGAAGGGAAATATGAATCGAAATTATTTCGA
ATCGACGATCCAATCCTTCGTGTACCAAACATTTGTATTCACTTGAACCG
AACCATGAAtgataatcattcagtcaacaAGGAGACGCAAACACCTGCTG
TTCTAGCCACCAAGTGTATAGATGAAGAGATGAACGAATTTGTCAACAGT
GATGAGAATACAGCGGCTGGAAAACATCACGGTGCATTCATTGAACGCAT
TTGCTCCGTTTTGAGTTGTAAACCAGAACAAatcattgattttgatattt
gtttaGCAGATACGCAACCAGCAGCTATTGGGGGTGTACATAAAGAGTTT
ATCTTTTCACCACGATTAGATAACTTATTCAATGCGTACACTTCACTTCA
AGCATTAATCAACTCATGTGTTGATCAGAAAAGTCTGGATGATGAAACCA
ACATTCGTATGATTGCATTGTATGATAATGAAGAGGTCGGCTCTCAAAGT
GCACAAGGCGCCGGTTCGGCTGTCACCGAATGGGTATTACGAAGAATCTG
CCAATGTTTTGGTGGTGCATTTGAACAAACCATCGCTAACTCCTACTTAT
TGAGTGTTGATCAAGCTCATGCTGTACATCCAAACTATGCCGCAAAACAC
GAGAATAACCATAAACCACAACTTCATAAGGGAATTGTTATCAAAACTAA
CGCCAACCAACGATACGCCACGACTGCCATTACTGGCAGTATCATTCGAT
TGATCGCCAAGAAATGCGGTGTTCCTTTACAAGATGTTGTCGTTAGAAAT
GATTCTACGTGCGGATCTACCATTGGTCCAATCATGTCCGCAAAACTAGG
CGTCCGAACACTGGATATGGGTGGACCAATGTTGAGTATGCATTCTATCC
GCGAACAATGTTGCACTACAAGTGTTCAACAAGGGGTCACTTTGTTCCAT
GCGTTCTTTGAAGAATTCCCTGGTATCGACCGAAACCTCAGTGCGAATTA
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055342-exon-scaffold_253-1491911889:380378..381229 | TCONS_00055342-exon-scaffold_253-1491911889:380378..381229 | Clytia hemisphaerica | exon |
| TCONS_00055342-exon-scaffold_253-1510915933:380378..381229 | TCONS_00055342-exon-scaffold_253-1510915933:380378..381229 | Clytia hemisphaerica | exon |
| TCONS_00055342-exon-scaffold_253-1575043694:380378..381229 | TCONS_00055342-exon-scaffold_253-1575043694:380378..381229 | Clytia hemisphaerica | exon |
| TCONS_00055342-exon-scaffold_253-1491911889:384355..386239 | TCONS_00055342-exon-scaffold_253-1491911889:384355..386239 | Clytia hemisphaerica | exon |
| TCONS_00055342-exon-scaffold_253-1510915933:384355..386239 | TCONS_00055342-exon-scaffold_253-1510915933:384355..386239 | Clytia hemisphaerica | exon |
| TCONS_00055342-exon-scaffold_253-1575043694:384355..386239 | TCONS_00055342-exon-scaffold_253-1575043694:384355..386239 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_253 | supercontig | scaffold_253:380378..386239 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001948 | Peptidase_M18 |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004177 | aminopeptidase activity |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006508 | proteolysis |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006508 |
proteolysis |
| molecular_function |
GO:0004177 |
aminopeptidase activity |
| molecular_function |
GO:0008270 |
zinc ion binding |
Blast
BLAST of TCONS_00055342 vs. Swiss-Prot (Human)
Match: DNPEP (Aspartyl aminopeptidase OS=Homo sapiens GN=DNPEP PE=1 SV=1) HSP 1 Score: 505.753 bits (1301), Expect = 2.198e-169 Identity = 242/467 (51.82%), Postives = 321/467 (68.74%), Query Frame = 1
Query: 865 KFSKEKVLESAEELVKFVNGSPSPYHAVDQCIQRLDASGFQRLDERHSWELAKGGKYYLTRNDSTIFAFAVGKKFVTGNGVSMVGAHTDSPCFKLKPKSKQESEGCLLVGTQCYGGGIWHTWFDRDLGAAGQVIVE-TEEGKYESKLFRIDDPILRVPNICIHLNRTMNDNHSVNKETQTPAVLATKCIDEEMNEFVNSDE--NTAAGKHHGAFIERICSVLSCKPEQIIDFDICLADTQPAAIGGVHKEFIFSPRLDNLFNAYTSLQALINSCVDQKSLDDETNIRMIALYDNEEVGSQSAQGAGSAVTEWVLRRI---CQCFGGAFEQTIANSYLLSVDQAHAVHPNYAAKHENNHKPQLHKGIVIKTNANQRYATTAITGSIIRLIAKKCGVPLQDVVVRNDSTCGSTIGPIMSAKLGVRTLDMGGPMLSMHSIREQCCTTSVQQGVTLFHAFFEEFPGIDRNL 2247
K KE V +A+EL+KFVN SPSP+HAV +C RL +GF L E W + KY++TRN STI AFAVG ++V GNG S++GAHTDSPC ++K +S++ G VG + YGGGIW TWFDRDL AG+VIV+ G+ E +L ++ PILR+P++ IHL R +N+N N E +LAT I EE+ + N +HH + +C+ L P+ I++ ++CLADTQPA +GG + EFIF+PRLDNL + + +LQALI+SC SL E ++RM+ LYDNEEVGS+SAQGA S +TE VLRRI CQ AFE+ I S+++S D AHAVHPNY KHE NH+P HKG VIK N+ QRYA+ A++ ++IR +A K VPLQD++VRND+ CG+TIGPI++++LG+R LD+G P L+MHSIRE CTT V Q +TLF FFE FP + NL
Sbjct: 8 KARKEAVQTAAKELLKFVNRSPSPFHAVAECRNRLLQAGFSELKETEKWNIKPESKYFMTRNSSTIIAFAVGGQYVPGNGFSLIGAHTDSPCLRVKRRSRRSQVGFQQVGVETYGGGIWSTWFDRDLTLAGRVIVKCPTSGRLEQQLVHVERPILRIPHLAIHLQRNINENFGPNTEMHLVPILAT-AIQEELEKGTPEPGPLNAVDERHHSVLMSLLCAHLGLSPKDIVEMELCLADTQPAVLGGAYDEFIFAPRLDNLHSCFCALQALIDSCAGPGSLATEPHVRMVTLYDNEEVGSESAQGAQSLLTELVLRRISASCQ-HPTAFEEAIPKSFMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVANKVKVPLQDLMVRNDTPCGTTIGPILASRLGLRVLDLGSPQLAMHSIREMACTTGVLQTLTLFKGFFELFPSLSHNL 472
The following BLAST results are available for this feature:
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