TCONS_00055357 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055357
Unique NameTCONS_00055357
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1056

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055357 ID=TCONS_00055357|Name=TCONS_00055357|organism=Clytia hemisphaerica|type=transcript|length=1056bp
CGGGTAGTGAAATTTTACTTACTATCCCCAGACCTTTAATGTATCCGACT
TGATTACTTGATCGCATCCAAACAAAAATTGTATTGAAATAATGTAATTC
ATTGAATAAGCGAGACAACATAACAGTCATACCAAAACTGAAAGAAAGGG
AGCGAATAACTTGAAAGAAAATAACCACTTTACTAATTTTTTTATACATG
TtttattagaaatattttaatgGTATGGCTTGAAATTGTTTTAATTTGAT
ACTTTATTGATATGTGATTATAATGGGAGAAATATCTGCAGAAACGCAGG
AAGTTAATGATGATTCTACGCCAACTTCTCGAGAGAGGTGTGTTTCTGAC
TCAAATGTTGAACTACAAAAGTATGATAATAAAAAGATGAATGGGAATGT
TAAGCATGGGGAAGTAAGGAGGAGACACTTTGGACATGCCTTTGGAAAGA
GACTAAGACTAATACTAAGACCTTGGAAATGGAGGAGGAAATCAAAACGT
TCCTACAGGGCATCAACTGGAACACAAAGTCAAAGAAATGTCAGTATAGC
TGACGATGCGAAACAAGGAGATGGATGTACAAACGACCGTAACGCGTCCA
AACTTTCCTACTCCACTAACGATCTATCAAATATTTCCCCCGTTGATGTT
AATTTTACAAAAGACTTGAAGGAACCTGATAAATTGAATAATGGAAATGT
AGTTAACACAGACAATAATACTgaaattgataataaaaagacTGAAATTA
ATGATAATACAAGTACTAGTCCGAAAAACTTATCACCTCCGAGTTCGTCG
AAGATAACGTTCTCAGCGCACAATAATGCTGACATAGACACAAAAATGAC
TAATGaACATACTCATACACCTAATCTCAAAAACGAAAACGAAGAGCGAC
CACCGCCGCCACCATATCCTGGGAACGCCACAGATAGTCCAAAtGTTTCC
ATTCCAACGGCCAGTCGACAGAATGACGATTCTGATTTAAGTGACAATGA
GGAAGATGGCCCACCACCTATCCCTCCAAGGGATGCTTATGTGCGCAATG
GTAAAT
Run BLAST on NCBI

protein sequence of TCONS_00055357-protein

>TCONS_00055357-protein ID=TCONS_00055357-protein|Name=TCONS_00055357-protein|organism=Clytia hemisphaerica|type=polypeptide|length=261bp
MGEISAETQEVNDDSTPTSRERCVSDSNVELQKYDNKKMNGNVKHGEVRR
RHFGHAFGKRLRLILRPWKWRRKSKRSYRASTGTQSQRNVSIADDAKQGD
GCTNDRNASKLSYSTNDLSNISPVDVNFTKDLKEPDKLNNGNVVNTDNNT
EIDNKKTEINDNTSTSPKNLSPPSSSKITFSAHNNADIDTKMTNEHTHTP
NLKNENEERPPPPPYPGNATDSPNVSIPTASRQNDDSDLSDNEEDGPPPI
PPRDAYVRNGK
Run BLAST on NCBI

transcript from alignment at scaffold_253:638402..648214+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055357 ID=TCONS_00055357|Name=TCONS_00055357|organism=Clytia hemisphaerica|type=transcript|length=9813bp|location=Sequence derived from alignment at scaffold_253:638402..648214+ (Clytia hemisphaerica)
CGGGTAGTGAAATTTTACTTACTATCCCCAGACCTTTAATGTATCCGACT
TGATTACTTGATCGCATCCAAACAAAAATTGTATTGAAATAATGTAATTC
ATTGAATAAGCGAGACAACATAACAGTCATACCAAAACTGAAAGAAAGGG
AGCGAATAACTTGAAAGAAAATAACCACTTTACTAATTTTTTTATACATG
TtttattagaaatattttaatgGTATGGCTTGAAATTGTTTTAATTTGAT
ACTTTATTGATATGTGATTATAATGGGAGAAATATCTGCAGAAACGCAGG
AAGTTAATGATGATTCTACGCCAACTTCTCGAGAGAGGTGTGTTTCTGAC
TCAAATGTTGAACTACAAAAGTATGATAATAAAAAGATGAATGGGAATGT
TAAGCATGGGGAAGTAAGGAGGAGACACTTTGGACATGCCTTTGGAAAGA
GACTAAGACTAATACTAAGACCTTGGAAATGGAGGAGGAAATCAAAACGT
TCCTACAGGGCATCAACTGGAACACAAAGTCAAAGAAATGTCAGTATAGG
TCAGTATATTTTGTAGTATGCTTAACATTTCAGAAAGAATAGTCTCCCAG
TTATTTTGTACACAAGTACATTTCTTNTAACATTTCAGAAAGAATAGTAA
GTCAGGCACaacctggcaaatgaacggggtatttttcacttgtgattggt
ggcaaaatgcaaggggtcgaaaacaaaagtgattgATGTAATAGTGCTGA
ATACCCCACACAATTGAAccgggtttgaaatattttgcttcattttgaaa
aactgcatagatgaaattttttttccatgggtcaattttgtctttgaaga
ttgaagaaacttttaacgaaaatctaaagttcccagttttcttccttttt
tcccattttcagtttgaagttcatttttattcattttcacgcttttagcc
tgagacgccctatctcatttacactgggtgaccataccccatgcaaatgc
tcaccctgttcatttgccaggatgtgcctgactgatagTTTCCCTTTTAT
TAGTACACAAGTACATTTCTTGGGTTGATGAAACATTCACCAGTCAtact
gtaacttggtctaatgtgtCGACATCACTCTTCTAATCCCGAAACCCTCC
TTCTTTAGACAAGAGGAATTAATGAACCGGTTCACTGTCTcgctggaaaa
aaatatttgatgccaAGAAATTTaattattcatttttatttttcaataca
GTACACAAGAAAAAGCTGGAAAAAGTTCATTAAAAATCCCTAACTCAACA
TCTGTTTTATTCCAGAGGTTCACTTTTGCTCCACATCTTCTTTTGATATT
TGCATAGAAATGTCTGCCATTTTTGGTTTTCTTTCTGCTTGTTCAAACTT
TTTCTGAATTAATATTTCcgatcttccaatcaaaacgtGGGATTTagatc
atgtgattacataccGTGAGATAACtaaggtaacttgcatcagtggaggc
taacatgcaaagccctcaaatgaatgacctggctggtcattaaatacaaa
gttaaatcaaaacaaaaatggtagagtagagctgcgagcggagctgcgta
gttcatttgttttgaaattttgctgctttgattggtcagtcatttgatgg
ctatgcattTTAGcctcactgatgcaagttacctgacttcacagTAGTTT
AGTTCTGATCTTCTAATCAAAAGGCAAGATTTTACGATCACGTGACTACG
GATGTCTTTAacattattgaattttttagtTGCGGTGCGCTAGAAATTCA
AAGATGGTGGCAAATGGTGTATATGGAAAGTTTTATGTCAGTTTGTCACC
CTTCTTTTAGATACAGGAATAATAGGAGGGTCGaaattgctgattgaaac
taattcTCTTTGCCTAgcgtaccgtaagttggtctaatatcgacatccct
cttctattTTCGACATAAATGTCGTAATCACTGATGAACTCCTCAACTGA
TTGCTcagcaaagaaaattagtttcaatccgcgattctgaccttcctatt
attcctatctttaaagaaggatgttgagattagaagagggatgtcgacat
tagaccaacttacggtagcaATCAGTTGagcaggctgcatcatttgaggc
GTGTGATAGCACGCGCACGCCTCCACACACACCCTAAAAGCCTCTTAGGA
GAGTGATAAATCACACGccttaaattttgagttttcagcGAAAAGTAGTG
CATCGCACACCTTATTATACGCCTGAAACTCCTTAAATTAATGGtttagg
agtgtgattgaccacacattgtctggaattttcaaatgacaaagcctggt
tgaggagtccatcagtgattccgaTCTTCCTAATATTCAtaagggatgtc
gacattagaccaacttacggtaatgaCAACTCCGCAATCGTTTCAATTGA
TTGGAGggtaccatcaactgctctaacttgggactatttGACAAaccatg
ggacggcaatttggccaccatttcttcgaacctccaaagtcatttaattt
gagttaatgaacagcgtattaaaaaatacacgatttctcttttgcaccaa
gtttaaaaacaacaataaataaCATTGCATCCATTCAAACAGTCTatgct
taaactcctatatcaagattacagaATTTGGAGTGCAGGCtgattttact
ttaattttcagtggttttactttcgattttgaGCCAACATCTTGGCAACG
GGGtactcgcccatagttacaggggtttattcaaaaaaaaccaaacatag
aaagttttccaaagcCCCTATTTTgattgaaccaataaaaaatgaaactt
tttcatgtttcacttttttgccccaattcttcaaaatgaagatattttaa
gatttaaagtccttcttttattcaatgatttttacggcactttgttgaca
atcgaactctcacatcaaattcccgctttcttaaGTAaactgaagatgag
aaaaaacctaagccttatGATCagggattgaaacaaatatataaaGGGTg
tgattttacagccgcccgtccttcaaggcactgagaggccactgGTGCCA
TAAAAGACGTGTGAAATgcggcaatctcattggtggaaatttgataaata
gctgcaaaggagcgccaggaagcaatcagtagaagagaccagctttcgtt
tttgttgctaattttgatataaacttctctcacagGAATTAATtatcaat
gtgttgtgtcaacttttacagcctagtttctaatcctgatataggagttt
aagcttagactgtCAAACGTGGAGCTATCAGGATTTATGCTGTCCAGAGT
TTTTTAATTATCCAACATGACATCGCATCTAGCAAAAAGTTTATTCGATC
AATTGCTTAGTTCTTATCACATAATACATTACGTAcatttttcgtgattt
taaacataaaggataaaataaaataaaaagttaaaaacattagcgCATGA
TGTTCTAAGACGCTGGTAAATGTGGAAAGCACAAAAGCTTAATTCCGCAC
TAAATAGACTTTCACCGGAGCCAGGATTCTACTTTGTTgactccagcatc
aaaacagTCAGCTTGGATAAAACTCTGTGTTTTGCCTTTAATATGAGAAA
GCTCGCATATTCTTAAAACACCCCCTGTCCTGACAGCTGACAATTAGGCT
AAGCTAAATTTACCTCTTTTCTCTTTCCTTTCCATTTCATTACAATGTTT
ACATTAATAGACCTTTCCCGAAACCCATTTAAAAATTAACCTctttaaaa
tgtaaattttgattaATATCACAGACGTTcatagttcggaagggggtcac
taccccccccctaccctaggttcttcccccttttaaaatttgatgctacc
cccctcaaaattttaaaatcctaccATAATTCTACCTGTGAAAAAGCAAG
AAAATAGAACACACTGCATTGCGAAAAAAATAGAATCATTTTGAATCGAA
TGTTTCAAACATACTAAACAATTAATAAAGAAGACGTTgcattgtaaatt
aaaaataaaacttctaatttgggaaaacacaaaaaaaaacataccactGA
CATCTTCCCCCCCCTTTCTagatgacccccccccctttctgaaaacttcc
ccctttctagaaaaaattctcttcccccccccctttctgagattttctga
acatcgttacccccccccctttataaagggggggtgCGAACTATGCGTTG
TTTTGATCTAATAAAAAATCTCCGAAAATGTTGTTCCATTTGGTCTACTA
AATCTAAACTAAAGATAATTCACTTTCTTTTCTGCAAAATTCCTCTTATT
TTGTAAGCTTCTGATCATTTTCTATAGCTCACCTCGTTTTTCATGTAAAC
ATAATTTGTTTAACCTTTATTGTGAATAGCTTCACAATCAGTGGCTTCCG
TAAGTCACTCCATCAGAAagtgttttttgtttatttaactAATGAGATTG
CCATGTATGATAAAGGTTAAGGACTGGCCCTATTTTTTGGCACAGATTGC
TTTTCAGTGGCTTGGATGAGGAGCAGTCATATAACTTTATTGTTTAATCG
TTGATTCTAAgggttaatttttttcttatctttagttCTTAAACTAATaa
agcaggaatttgatgcAGGCGTTATTTTTTTAAGGAATtctttctgattg
gatgaacACGCTTTATCTTCATTTGATTGGATACTTCTTTTTAAACAATT
GCACAacttttttatttgacaaaatAAAGCCATTGATATCGCTGGATATC
GTGGTGATTGtataacaaaatatttggcacttTCACAAGTGTGAAACAAT
CTAAGTATTTTCCAGGGGATggatttttagtttttcttccatttcttttt
gTTCGCCAATCCGGGGAGACAAATGCTATTTCAATCAATTGTTTTTGCTG
ACTGAGCAAAATCAATCGTATCAAAATCAGAAAGCTCTTtaaaaagtttc
tgaggaaatgttaatttattattgataattaattaattaattgatATTAA
TGTTAATAAAGTGAGAGTAGTAAAATGTTATCAATTATAGAACAATTCAT
ACTTTTTCCTGTGCTGAGAAACAACTTAAGGAAAAAGCCTGTTCCAGTCA
AATGAATTTAATCCTagttatttcataaaaaattaataaattcttcaaaa
ataacACTAACGTCCCTGCATGTTTCAATCAAGTTAATTATTTTAACCTT
TGTGCTCAAATGATTGTTTGTCATTTCGCATTGAATGTTCTGGAACATCT
CAAGACAGTTCCATTTCCAAccatttatattttgaaattgctTGTGATAA
AACATGCTGTATGATTTTTTAAGTAATGGGATTTTACAAGACACATTCTT
TTTTCTATTAGcttgatttcttttgattttaagTACCATTGTTCCAGAAC
AAGGCAGTCATTAcatgtaaaaaatgaaaaacaattttagCTGTTCTCAG
gaccataaaaaaattatattggtcaaaaaatatcaaaacctttaTTTATG
GTGAATGATGATGGATGGCATTTTTATTGTGaacattttttataaagatt
ttcagaattttcaaaaaacggaCCTGGGAGGCTAAGACCCTTGAGGATAC
TATGGAGAAAATCCTACCCTGTCTATTTGTCTTTTGTCGATCATCAGTTG
AAGTTTTGCACTCTTTGAAAGTAAGTGGAATATTTAAGGTTCGAAACTCC
TAttcaatttttgggaaaatctttATTCTGTGGCATGTTTAACTGATTTA
ACAAGTTTATGGGGGGGGGGACAAAGTAGATCAGAACTCAGAATTTAAAT
TAACAGCTCTTAAAACTTGATCtaatagttatttttctcctGCACAATTG
AAATCAGAATTATGGGATAGGGGCCTATGTTTGCTGCATGacaattttga
aagatttcaaaataccttacttttttaagtttttcaataattttttttag
gtaaattttgtaaacaaatgTAGATTGTTAAATCAGACTATTATTTCAAA
ACTATAATTGAGAAGAAGTTATCTTAAATACGGATACTTATCCAGAGAAG
TAAGCCTTCTCTAGGAGAAGAACTATACAGGCTATATAACTATACAAGCT
ATATTGAGATGTGAAAATAATTTCTATTTAGGTTAGATAATATATAAACC
CACAAAAAACAGTGGGAGTTCTTCAATGAAATTTGGTTCAAATGCTTCAA
ACAGTGCTTAATAGAATTTTCTGTGATTTTTGGGAGCTATTTGGTTAATC
CTTTTTAAGGTTTTCGTTAAAATATTTTCCCTACTTTTCTGATTCCTTCC
TAAAGTGAGGGAAAACGTTcagaaaaattcctttttatctTACCCATTTT
ATATAGTAGCATGTTTTTAAATGATATGGCAAGTTTTGCTAGATCTGTGA
ATAAGAGGATGGGAAATGTTCGTAATATATGTTAAACACTTTGTTTCTTC
CTTTTTGTCACAGTGAAATACAAACTTTTACACTTACCGTACTCTTAGAA
TAAAATAGAAGTTTTAATACCACACAATCTTTTATTCTATTTATATGTAC
ACTGCTTTTATCAACGGATATTATCAGTAACTGTTTTTAATTAACAAGAT
TATAGTattattggcatttttatgcaataaatttgaactttttttcataC
AAAGGAAATTATTTGGTATCTTAGAGCTACTATAAAGTAACTCGATAAAA
AGTTTCTAACTTAAGCCCAGAGATTTAATAAGTCAGGTATGTTAAAAATG
TTTGTAATGTCTTtcatttctttatctttttaatAGTAATTTCTGTAAAT
GAGCAGGTCATTAAGCAATTTGTAATGCTCGTAaactttttgttcctttt
taaaaagatattactTTAAATGTAAGAACTTATCATgtgtgttgtgtata
agaattAGCCCAAACATAATGAGAGTAAAAAGTATATTTCTTTATGCATA
AGCagatttatattttatttttatattaacTTATCCTACGCTACGATGCT
TTTGCTTTAATAAAAAGTAGCATTAATAACAAAATTATACTTTAAAGTAT
ATCTTTCCTTGATGCAAGATGCAAATCTTCCGAAAATAAGCAAATGAAAG
CTTACAAAGGAATtaattttataaatttgtttAGTTCTTAGTCTATCAAA
GATGACGTTATGTAACTGAACTCAATTTCTGATTAACAATGTTTGAGTCA
ACTTTCCTAAATATGTCAGCTTGGTCAGTGCAGTGAAAATCACCACTTGA
CATTTTTCTCCAATCTGTAATAAAAACATCATTtacgtcaaaaatgaaat
aaacaaacATATTGTCAAGGGTATATCTTTATCACTTGTCACTTTTATCC
TTAAAAAATGTCCTTTTAACATaacattcaaaaaattatataaaatttct
ttcccaaaaaggttttgtttttaagtttctatttctatttggttgagtat
CATTATAGACATAAGCattatagacgctttcaatgagcgtctcgtcagca
ccttggactgactacccgattcccctcacatggcatgggttgacacgggc
gaaggttcattcactttccaagtgaaccgctgcgagtgggaaacgaacct
cagtcgcctgtgcagcaaccaaggtcaatgaccactataccacagtcACC
TTATTAGGATTATCCGATAATTATAACTGAagggtttgaaagtttttttt
atccACTTGGGGTAACAGCTAGGGATCATTTCTCTTAGCCAAAGTCCCta
aaattctatgtaaattcAAAGCCAGTAACTACTTGAACCAATGAAAAACT
TCTGAATATAGTCTAAGACTTACAGTTTAGTTACTTTCTATTGCCATTAT
TGTTTTTCAaggcatttttttattttcatttacagCTGACGATGCGAAAC
AAGGAGATGGATGTACAAACGACCGTAACGCGTCCAAACTTTCCTACTCC
ACTAACGATCTATCAAATATTTCCCCCGTTGATGTTAATTTTACAAAAGA
CTTGAAGGAACCTGATAAATTGAATAATGGAAATGTAGTTAACACAGACA
ATAATACTgaaattgataataaaaagacTGAAATTAATGATAATACAAGT
ACTAGTCCGAAAAACTTATCACCTCCGAGTTCGTCGAAGATAACGTTCTC
AGCGCACAATAATGCTGACATAGACACAAAAATGACTAATGGTAtggtat
acatgttttttaatgtATGAAAAAATGTTATAAACGGACACTCGGTATGA
TGATGACAATAACTTTTGCTACTTTGATCTATTTTAATGTCTCAAATATA
TATGTCAGTGTGCTTGGATCAGGGTCTTGGGTTCTTTGGAAATAAATTCT
TGATTTCattattgttttgtttcttttagaACATACTCATACACCTAATC
TCAAAAACGAAAACGAAGGTGAGTTTAAtgttgataaaaatttcagattt
tcacTGATGATTGACGCAGAAGGtgccatgaaactctgagtatGAAATAA
GAACTTAGTCAACTATCAATGCGATAAAATATCTCTTTGGGTTCTAATAG
AAAGAAATAGTTGTTGCTAATTCAACAGTAAGATTAATCCATCAGTTGAA
TTTGGTTTTCTTAAACAATTTTACAGATTAAGGTTTTTTATTTAAGTCAA
TAAATGCATACCACTCACACTCGCTGACCTTGATCAAAGACTTTTATAAA
TATACAAACACTTTATTGATCATTGTGATTATTCCTTAACATCTCTGGCT
TTTTTTGTAGAGCGACCACCGCCGCCACCATATCCTGGGAACGCCACAGA
TAGTCCAAAGTAAGCAATCTATTTCTTTTTAAGAGAtatcttttctcatt
tttatctgCAAAATTATTGATTTTCTAAGTTCTAAGATAATTAAGAACTG
ACTGATTAGAACAGGAGCTAAAATTCTCAATCGTTCCTTGCTCTACCTGG
TTTATAGCATTTCGAAGCTTTTAAGTGATAAAGTGATAAAGTGTGACCTG
GCCTGAATATATCTGGTTTGGCAAAAGTTTCATTATCAAGAGCTGCACAT
TAAAGTTTGAAGCACATCTTTTCCagtgataaaaaatgaaaatcttatta
TTCCGCCCTCTAAATAGTTGGGACTTAAAATAACAGTGCGAAATTCCCAT
TAATAAAATGTGCTAAATTAAATGGTTCTAACTTAACTTTCTATCTAATA
GTaacatcatttttcatttttgcggGCCTcctctcaaaaaagtcttaAGA
TCACTATTTGGTTTGAAGTTACCACATGCGGTCGCGTCCAACAAAAGATG
CTACGGATCCCAAGGGTTGGCCAGCTGCTAAGTCAATATTCAGACTGCAT
CACCAAAGAGTCACCTCCAACTTTTTCCCGAAGTGAGCtagagatttcaa
atttccCTTGAAAGGAGTCTACCAAGTTTGATTAATCGAGGGTGCTGAGT
TTTTTCACAGGTGGTGAACTAATGAATTTGAAATCGATGAGAAATGGCCT
TACCTTAAAATCTTTATTACATCTTCATAACGCTGaaactcccccccccc
cccagaggTTCCGTTCCTTTGCCAAACGACGGGAACATTATTCCATGAAT
TATTCCTTCTATTTACAGTTCCATTATTtccttttattgtttttatttag
tGTTTCCATTCCAACGGCCAGTCGACAGAATGACGATTCTGATTTAAGTG
ACAATGAGGAAGATGGCCCACCACCTATCCCTCCAAGGGATGCTTATGTG
CGCAATGGTAAAT

Coding sequence (CDS) from alignment at scaffold_253:638402..648214+

>TCONS_00055357 ID=TCONS_00055357|Name=TCONS_00055357|organism=Clytia hemisphaerica|type=CDS|length=3915bp|location=Sequence derived from alignment at scaffold_253:638402..648214+ (Clytia hemisphaerica)
ATGGGAGAAATATCTGCAGAAACGCAGGAAGTTAATGATGATTCTACGCC
AACTTCTCGAGAGAGGTGTGTTTCTGACTCAAATGTTGAACTACAAAAGT
ATGATAATAAAAAGATGAATGGGAATGTTAAGCATGGGGAAGTAAGGAGG
AGACACTTTGGACATGCCTTTGGAAAGAGACTAAGACTAATACTAAGACC
TTGGAAATGGAGGAGGAAATCAAAACGTTCCTACAGGGCATCAACTGGAA
CACAAAGTCAAAGAAATGTCAGTATAGCTGACGATGCGAAACAAGGAGAT
GGATGTACAAACGACCGTAACGCGTCCAAACTTTCCTACTCCACTAACGA
TCTATCAAATATTTCCCCCGTTGATGTTAATTTTACAAAAGACTTGAAGG
AACCTGATAAATTGAATAATGGAAATGTAGTTAACACAGACAATAATACT
gaaattgataataaaaagacTGAAATTAATGATAATACAAGTACTAGTCC
GAAAAACTTATCACCTCCGAGTTCGTCGAAGATAACGTTCTCAGCGCACA
ATAATGCTGACATAGACACAAAAATGACTAATGaACATACTCATACACCT
AATCTCAAAAACGAAAACGAAGAGCGACCACCGCCGCCACCATATCCTGG
GAACGCCACAGATAGTCCAAAtGTTTCCATTCCAACGGCCAGTCGACAGA
ATGACGATTCTGATTTAAGTGACAATGAGGAAGATGGCCCACCACCTATC
CCTCCAAGGGATGCTTATGTGCGCAATGGTAAAATGGGAGAAATATCTGC
AGAAACGCAGGAAGTTAATGATGATTCTACGCCAACTTCTCGAGAGAGGT
GTGTTTCTGACTCAAATGTTGAACTACAAAAGTATGATAATAAAAAGATG
AATGGGAATGTTAAGCATGGGGAAGTAAGGAGGAGACACTTTGGACATGC
CTTTGGAAAGAGACTAAGACTAATACTAAGACCTTGGAAATGGAGGAGGA
AATCAAAACGTTCCTACAGGGCATCAACTGGAACACAAAGTCAAAGAAAT
GTCAGTATAGCTGACGATGCGAAACAAGGAGATGGATGTACAAACGACCG
TAACGCGTCCAAACTTTCCTACTCCACTAACGATCTATCAAATATTTCCC
CCGTTGATGTTAATTTTACAAAAGACTTGAAGGAACCTGATAAATTGAAT
AATGGAAATGTAGTTAACACAGACAATAATACTgaaattgataataaaaa
gacTGAAATTAATGATAATACAAGTACTAGTCCGAAAAACTTATCACCTC
CGAGTTCGTCGAAGATAACGTTCTCAGCGCACAATAATGCTGACATAGAC
ACAAAAATGACTAATGaACATACTCATACACCTAATCTCAAAAACGAAAA
CGAAGAGCGACCACCGCCGCCACCATATCCTGGGAACGCCACAGATAGTC
CAAAtGTTTCCATTCCAACGGCCAGTCGACAGAATGACGATTCTGATTTA
AGTGACAATGAGGAAGATGGCCCACCACCTATCCCTCCAAGGGATGCTTA
TGTGCGCAATGGTAAAATGGGAGAAATATCTGCAGAAACGCAGGAAGTTA
ATGATGATTCTACGCCAACTTCTCGAGAGAGGTGTGTTTCTGACTCAAAT
GTTGAACTACAAAAGTATGATAATAAAAAGATGAATGGGAATGTTAAGCA
TGGGGAAGTAAGGAGGAGACACTTTGGACATGCCTTTGGAAAGAGACTAA
GACTAATACTAAGACCTTGGAAATGGAGGAGGAAATCAAAACGTTCCTAC
AGGGCATCAACTGGAACACAAAGTCAAAGAAATGTCAGTATAGCTGACGA
TGCGAAACAAGGAGATGGATGTACAAACGACCGTAACGCGTCCAAACTTT
CCTACTCCACTAACGATCTATCAAATATTTCCCCCGTTGATGTTAATTTT
ACAAAAGACTTGAAGGAACCTGATAAATTGAATAATGGAAATGTAGTTAA
CACAGACAATAATACTgaaattgataataaaaagacTGAAATTAATGATA
ATACAAGTACTAGTCCGAAAAACTTATCACCTCCGAGTTCGTCGAAGATA
ACGTTCTCAGCGCACAATAATGCTGACATAGACACAAAAATGACTAATGa
ACATACTCATACACCTAATCTCAAAAACGAAAACGAAGAGCGACCACCGC
CGCCACCATATCCTGGGAACGCCACAGATAGTCCAAAtGTTTCCATTCCA
ACGGCCAGTCGACAGAATGACGATTCTGATTTAAGTGACAATGAGGAAGA
TGGCCCACCACCTATCCCTCCAAGGGATGCTTATGTGCGCAATGGTAAAA
TGGGAGAAATATCTGCAGAAACGCAGGAAGTTAATGATGATTCTACGCCA
ACTTCTCGAGAGAGGTGTGTTTCTGACTCAAATGTTGAACTACAAAAGTA
TGATAATAAAAAGATGAATGGGAATGTTAAGCATGGGGAAGTAAGGAGGA
GACACTTTGGACATGCCTTTGGAAAGAGACTAAGACTAATACTAAGACCT
TGGAAATGGAGGAGGAAATCAAAACGTTCCTACAGGGCATCAACTGGAAC
ACAAAGTCAAAGAAATGTCAGTATAGCTGACGATGCGAAACAAGGAGATG
GATGTACAAACGACCGTAACGCGTCCAAACTTTCCTACTCCACTAACGAT
CTATCAAATATTTCCCCCGTTGATGTTAATTTTACAAAAGACTTGAAGGA
ACCTGATAAATTGAATAATGGAAATGTAGTTAACACAGACAATAATACTg
aaattgataataaaaagacTGAAATTAATGATAATACAAGTACTAGTCCG
AAAAACTTATCACCTCCGAGTTCGTCGAAGATAACGTTCTCAGCGCACAA
TAATGCTGACATAGACACAAAAATGACTAATGaACATACTCATACACCTA
ATCTCAAAAACGAAAACGAAGAGCGACCACCGCCGCCACCATATCCTGGG
AACGCCACAGATAGTCCAAAtGTTTCCATTCCAACGGCCAGTCGACAGAA
TGACGATTCTGATTTAAGTGACAATGAGGAAGATGGCCCACCACCTATCC
CTCCAAGGGATGCTTATGTGCGCAATGGTAAAATGGGAGAAATATCTGCA
GAAACGCAGGAAGTTAATGATGATTCTACGCCAACTTCTCGAGAGAGGTG
TGTTTCTGACTCAAATGTTGAACTACAAAAGTATGATAATAAAAAGATGA
ATGGGAATGTTAAGCATGGGGAAGTAAGGAGGAGACACTTTGGACATGCC
TTTGGAAAGAGACTAAGACTAATACTAAGACCTTGGAAATGGAGGAGGAA
ATCAAAACGTTCCTACAGGGCATCAACTGGAACACAAAGTCAAAGAAATG
TCAGTATAGCTGACGATGCGAAACAAGGAGATGGATGTACAAACGACCGT
AACGCGTCCAAACTTTCCTACTCCACTAACGATCTATCAAATATTTCCCC
CGTTGATGTTAATTTTACAAAAGACTTGAAGGAACCTGATAAATTGAATA
ATGGAAATGTAGTTAACACAGACAATAATACTgaaattgataataaaaag
acTGAAATTAATGATAATACAAGTACTAGTCCGAAAAACTTATCACCTCC
GAGTTCGTCGAAGATAACGTTCTCAGCGCACAATAATGCTGACATAGACA
CAAAAATGACTAATGaACATACTCATACACCTAATCTCAAAAACGAAAAC
GAAGAGCGACCACCGCCGCCACCATATCCTGGGAACGCCACAGATAGTCC
AAAtGTTTCCATTCCAACGGCCAGTCGACAGAATGACGATTCTGATTTAA
GTGACAATGAGGAAGATGGCCCACCACCTATCCCTCCAAGGGATGCTTAT
GTGCGCAATGGTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034873XLOC_034873Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055357-exon-scaffold_253-1491911889:638402..638950TCONS_00055357-exon-scaffold_253-1491911889:638402..638950Clytia hemisphaericaexon
TCONS_00055357-exon-scaffold_253-1510915933:638402..638950TCONS_00055357-exon-scaffold_253-1510915933:638402..638950Clytia hemisphaericaexon
TCONS_00055357-exon-scaffold_253-1575043694:638402..638950TCONS_00055357-exon-scaffold_253-1575043694:638402..638950Clytia hemisphaericaexon
TCONS_00055357-exon-scaffold_253-1491911889:646337..646642TCONS_00055357-exon-scaffold_253-1491911889:646337..646642Clytia hemisphaericaexon
TCONS_00055357-exon-scaffold_253-1510915933:646337..646642TCONS_00055357-exon-scaffold_253-1510915933:646337..646642Clytia hemisphaericaexon
TCONS_00055357-exon-scaffold_253-1575043694:646337..646642TCONS_00055357-exon-scaffold_253-1575043694:646337..646642Clytia hemisphaericaexon
TCONS_00055357-exon-scaffold_253-1491911889:646831..646869TCONS_00055357-exon-scaffold_253-1491911889:646831..646869Clytia hemisphaericaexon
TCONS_00055357-exon-scaffold_253-1510915933:646831..646869TCONS_00055357-exon-scaffold_253-1510915933:646831..646869Clytia hemisphaericaexon
TCONS_00055357-exon-scaffold_253-1575043694:646831..646869TCONS_00055357-exon-scaffold_253-1575043694:646831..646869Clytia hemisphaericaexon
TCONS_00055357-exon-scaffold_253-1491911889:647212..647260TCONS_00055357-exon-scaffold_253-1491911889:647212..647260Clytia hemisphaericaexon
TCONS_00055357-exon-scaffold_253-1510915933:647212..647260TCONS_00055357-exon-scaffold_253-1510915933:647212..647260Clytia hemisphaericaexon
TCONS_00055357-exon-scaffold_253-1575043694:647212..647260TCONS_00055357-exon-scaffold_253-1575043694:647212..647260Clytia hemisphaericaexon
TCONS_00055357-exon-scaffold_253-1491911889:648102..648214TCONS_00055357-exon-scaffold_253-1491911889:648102..648214Clytia hemisphaericaexon
TCONS_00055357-exon-scaffold_253-1510915933:648102..648214TCONS_00055357-exon-scaffold_253-1510915933:648102..648214Clytia hemisphaericaexon
TCONS_00055357-exon-scaffold_253-1575043694:648102..648214TCONS_00055357-exon-scaffold_253-1575043694:648102..648214Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055357-proteinTCONS_00055357-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:638402..648214 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
55.4575	51.1389	123.592	121.89	233.457	169.037	141.306	152.657	75.9588	88.0974	62.8909	66.1974	55.5753	49.7308	41.7179	48.9047	67.4787	67.8421	51.5167	70.3094	75.124	79.7056	54.0774	64.8391	160.863	136.944	102.865	103.099	88.1462	94.4015
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055357 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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