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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055440 ID=TCONS_00055440|Name=TCONS_00055440|organism=Clytia hemisphaerica|type=transcript|length=534bp
AATGTGTGTACTAATTTTCACGCTGCAAGTTGTTGAAATACATATTAAAA
ATACTTTGATCTAGAATTTTGGTTTGACAGAATGTCTATTATGGAAACAG
ACGGTAGAGATGTACAAAACATCGATGGAACAAGCATATGTGGTCCACCT
AAACGTTCTTGGAAACAGTTTTGGTTGGCCAAATCTGGTAGAAGAGTGAt
cccaaaaaaatgtcaaatatctGGTTGTCCAAATAGAGCCACTGATGGTG
CTCATGTTTGGATTAAAGGTTATAACGGCGTCCCTCTAAAAAGAATATAT
ATTACCCACGTGTAATCCTTGTAACAATCACAATAATACTGCATGGATGC
CGACATTAAAATCAGCTATTGCAGTTCATATCTCCGAGAAAGATGCCGAT
TATGACCCACAATGTCATTGATGACTTAATACAATTTTGTATATTAATAA
TATAGTATTAGatataaggcgagaccaatttaatttgttgttctacgggc
agatcgttagcaaattatgggtcggtcggtcgta Run BLAST on NCBI transcript from alignment at scaffold_253:984516..985786+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055440 ID=TCONS_00055440|Name=TCONS_00055440|organism=Clytia hemisphaerica|type=transcript|length=1271bp|location=Sequence derived from alignment at scaffold_253:984516..985786+ (Clytia hemisphaerica)
AATGTGTGTACTAATTTTCACGCTGCAAGTTGTTGAAATACATATTAAAA
ATACTTTGATCTAGAATTTTGGTTTGACAGGTAGGAATAGTTTTATCGCT
aattcatgaatttttttaccctttttacCTCCACCAGTCACATGTAGGGT
TGCAAAAGCAACAAAATGTAAAATCAGTGCCTTTAAAagtgcttttttga
aagtttgggAAAGAAGTACAATATTTTGAGAAAGTTTTTGCGAAGATttt
tagtagggggccaagccttggGTTCCGTGagatcttttctacgacctagc
catttttagtctattccaaagaacagtatattacaagatatttttgagag
ggaggaagtggattaggcccgggaaaactttttatgacaaaaatagtgac
gtcataggcaaaactgcaagggaaaataaggggtagagaaatagcttatt
ttcaaaagtcaaaataaacgaaaatgattggtaccatctgatagagcaaa
aaattgtattacaacaactctctgactaaaacacacaaatgAATACAGCC
GCTTTAAGACAGACTAGCTGTCAGCTCTACTGCGATTTGACGTCAGATCT
TGTCTTTTGATCGaactgacgtcggtatgtttttaaacttcaggcggctg
tatttcttttttttgtgtCTTCTTTgtgtcttttgtcttttttgctaggt
cgtagaaaagatgtcacggaacccaaggcttggccccctactatttgtaa
caattttcaaaaatgagttcAGTATTTGTCGAAATAATTTCTAATCTCTT
GATATTATTTGCCATAGAATGTCTATTATGGAAACAGACGGTAGAGATGT
ACAAAACATCGATGGAACAAGCATATGTGGTCCACCTAAACGTTCTTGGA
AACAGTTTTGGTTGGCCAAATCTGGTAGAAGAGTGAtcccaaaaaaatgt
caaatatctGGTTGTCCAAATAGAGCCACTGATGGTGCTCATGTTTGGAT
TAAAGGTTATAACGGCGTCCCTCTAAAAAGAATATATATTACCCACGTGT
AATCCTTGTAACAATCACAATAATACTGCATGGATGCCGACATTAAAATC
AGCTATTGCAGTTCATATCTCCGAGAAAGATGCCGATTATGACCCACAAT
GTCATTGATGACTTAATACAATTTTGTATATTAATAATATAGTATTAGat
ataaggcgagaccaatttaatttgttgttctacgggcagatcgttagcaa
attatgggtcggtcggtcgta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055440-exon-scaffold_253-1491911889:984516..984595 | TCONS_00055440-exon-scaffold_253-1491911889:984516..984595 | Clytia hemisphaerica | exon |
| TCONS_00055440-exon-scaffold_253-1510915933:984516..984595 | TCONS_00055440-exon-scaffold_253-1510915933:984516..984595 | Clytia hemisphaerica | exon |
| TCONS_00055440-exon-scaffold_253-1575043694:984516..984595 | TCONS_00055440-exon-scaffold_253-1575043694:984516..984595 | Clytia hemisphaerica | exon |
| TCONS_00055440-exon-scaffold_253-1491911889:985333..985786 | TCONS_00055440-exon-scaffold_253-1491911889:985333..985786 | Clytia hemisphaerica | exon |
| TCONS_00055440-exon-scaffold_253-1510915933:985333..985786 | TCONS_00055440-exon-scaffold_253-1510915933:985333..985786 | Clytia hemisphaerica | exon |
| TCONS_00055440-exon-scaffold_253-1575043694:985333..985786 | TCONS_00055440-exon-scaffold_253-1575043694:985333..985786 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_253 | supercontig | scaffold_253:984516..985786 + |
Blast
The following BLAST results are available for this feature:
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