TCONS_00055459 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055459
Unique NameTCONS_00055459
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length536

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055459 ID=TCONS_00055459|Name=TCONS_00055459|organism=Clytia hemisphaerica|type=transcript|length=536bp
aggtACTGCGTTTCACTACAAAAACCAAGACTCGTGCAACGCTTGACCAA
GATGGGATATTCACATGCCGTCACACTAAATAAGGATTGTTCGCACGCAG
TAGTCGTTTCATCGTCAATCAGTTCCTTATCACAAGTCAACTTATGCCGC
ATATTGCAAAACCCTTCACCACACTTAAACGGCACTGGATGGCTTGAATC
ACCCAGAGAATTTCCAAAAGGATATGTACCTCCAGAAATCTTCAGCTATG
TCAATTCTGCAGGAAAACAGATCTACGGGATGTTATTTAAACCGTTGAAA
TGCGTGCCCGGTGAAAAATATCCAACTTTACTCTACGTCTACGGTGGCCC
TGGCGTGCAGTTGGTCAGTAATTCTCAGTACTCAGTTCGTCGAGTGAACC
TTTATGCTTTGGCAACCCTGGGTTACGCAGTTGTTTTCATTGatacaatg
ggctcttccaatCGTGGTGTCCAATTCGAAGCagcaattcaaaataaaat
gGGCACAGTTGAAATTGACCAACAGATCGAAGGACT
Run BLAST on NCBI

transcript from alignment at scaffold_253:1249834..1263902+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055459 ID=TCONS_00055459|Name=TCONS_00055459|organism=Clytia hemisphaerica|type=transcript|length=14069bp|location=Sequence derived from alignment at scaffold_253:1249834..1263902+ (Clytia hemisphaerica)
aggtACTGCGTTTCACTACAAAAACCAAGACTCGTGCAACGCTTGACCAA
GATGGGATATTCACATGCCGTCACACTAAATAAGGTAAGTTCACTATTTA
TATTCCCATCGAAAATACGATTGTGCAGTATGACCTAAATAAAAAAGGAC
AGAATTTCTTATATTAGTCACCATGTTAGGGCTTTACAAAAACGTGGTGT
CAGGATTACGTTCGTTGTGTAGGATGTCAGTAGCCAAGATGTATCTAATG
AGAGCTTTAAACAGATTAATGATCTGATCCGGCGGAGATTTCCACTTTCA
ATTCGGCATCTCTTCGTTTCTCTTCGTTttaatgggaaataagtggcttc
taGACCAAAAAAATCACTAAACTGTTGACACCTCTATTTATGACTGGCAA
CGCTTCGCTACTGCTAGGGTCGATATAACAAAGATCACCGAGCCTCCGTC
CATATAGGGTATAAGAAATAGTTTATATGAATATATTCGTCATTTTCTTA
GGATTGTTCGCACGCAGTAGTCGTTTCATCGTCAATCAGTTCCTTATCAC
AAGTCAACTTATGCCGCATATTGCAAAACCCTTCACCACACTTAAACGGC
ACTGGATGGCTTGAATCACCCAGAGGTATGTATGTCCAATTTTCAATGTC
TTTATCTGTTAAACTTTGCATTTTagttgtctgtttgataaaatgaAGAA
ACCAAAAAACGAAGACGGGGGTATCGTTCTGTAAAATTCCCTATTTCTTC
AAGACATATGTTACTGCCTTTAAGCTCCATATGACATAAACAAACTCATA
TTTTTCTGTGTGTCCTGGAGATTTTCAAGAAACAGAACATGTTTGAGAAC
AGGTGAGAAGCGTAACCGTGAATCTTCTCATCAGGGGTTGAAATGACAAT
ATTTTTATCTTAtgggttgaaaatttttgttacagttagactttttttta
taaaaaccagcactctcaggtgcctaatgAGCGGGGGtgaatttggaaaa
ttcttaCTAAATTTGTTAAACGGAGGGACCTAATTGGGGTTGGGGGTTTA
AATCTGTACCTATAATCATCCCAAAAATAAGCTATAGTTATAGATTAAAA
CCTGGCTACTTAGAGCAAGATAAGGGACTCTTCTTTTGacatctgaaaat
atttttaaagattagTAAACGAAGAGGGGGGTCCAAAAAGGTCCGGAGta
caaaaaatctaaaaattgatACTTAAACGGGGGCGGGGGCGGGTGGCGTT
TATTAAGGACCAGAGAATTAATTTTTGATGAAGCAAGGCTGTTTTTGGAC
CGAGGTCCTTTAGTTTAACCGTCCatttgtctgttaccagcttttctcgg
gattgcccattattttttgcatactgacttggtatttttttctgattttt
tgcacaatgatgtaaaatggtattgtttaaaattaaatagagcccgattt
tcgaaataaaAGTGGCTGAAGCtatttttttgggaattttttttttgacc
gtaaaaatcggattttcttatttaggGAAATtctcttttatcatttttag
agaaaattagcatttctcgcgattgacttggcattttttctgattttttg
cacaattatgtgaaattttatgtctaaaatctgatggagcctgattttcg
aaaaaataaattttgttggaaatttgggctaaaaagggcctaaaatgggt
ttttttggactttatatgaaattacttcattagtttttttttgacttttt
gtataAAGACAGAGAGGAAGGTTCTCCAAGAAGTGGCTCAAgcagttttt
tggacctaccccggtggggtgaaggtcctataaattaacatgtgttcgtt
cgtccgttcgtctgttaccaacttttctcaggattgaatcataggaatct
tttgatttttggtacaaaggtgcaaaatggtgttggccaaaatgtgacgg
agcccgattttcgaaaaaaaattttgggggtaaatttgggccaaaaaact
gctaaaaaacgggttttttggactttgtgggcttacttttgaaaaatatg
tgtgtttagacatgaaattttggttacttggcgtgtttttatagagaaac
tggccaaattcgatattttttataagcacattatcaattacttaggtatt
agcttttctcaagattggctctttcattctttatgattttttggacaaag
atgcataactataaaccctcgaatgtgacggagcccgattttcgaaaaaa
aatgtttttgggcaaatttgggccaaaaaacggctaaaaaacgggttttt
tggactttgtgaaaaattggatcattgttttttctgattttttgcatgaa
agtaggtaaaaaatggctcaagcagattttgttaaaaaagaatttttcaa
ctcaaaaaaacgcatctttatctataagatagatatgccctccgatgtat
cggaatgggtcctacccacggtggagtaggaatcacagcgcaagcagaca
ttgcaaccctgcagatgcgagctgccgagNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggtgtataccacgacact
cgaactacacgggagaacggatgtcctcGCAAGTGTAGAACCTCCTGAGT
GTCAcggcacaccacaatgtctgaaatatctatctataagaatcactatt
aataagcatacatcaatgttcttagccaaattactaaattttgatgcgat
agatgttttttttgctcacgaagtcttgaatatgaaagaatatttcaaga
gtatgaaattttggttctaaacgtttttttataagaaacaaacgactaat
tttaatagattgtcactatttgtgttctgaatgattatatatgtgttaaa
tgcataaccaggtaggtccataaaagtatcacttgtttcggaaaactttt
ttaagccgtaaaaatcgtattttcttatttggggaaattcccctttatca
tatcatttttagggaaaatgagcatttctcgcgattgacatggaattttt
tctgattttttgcacagtgatgtgacgattttcgttaaaaaaattgggcc
aaaaagtgcatAAGAAaggggttttttggactttgtgtgaaatttccTTC
CTTAGTTTTTCctcttatgatttttttaaagaaaaagctTTAGTCAAATT
TGGTGCAAATTTTGGATTTGTGGAACTTGCTTCATTAGATTTTATGTTTA
AAGAGATAGAGCTATCTTCACAGGAAAGAAAggattgtttttgtttatgc
ccaaaacttagcatggttcgatttccaaaaaaatccttTTATATGGGGCT
GCTTTGCTCTAAAACATCGGAAACAGTGTGAAACAAACTTCATCATATTT
TTCAAGCTTACACATCTCTATGTTATGctgttatcttttctttttcgttc
gaacattttcatcttcattcagcATGTCTCTGACTATCTatctcaggtag
gtccattcagcatgttgcttttTCCTCTtatctgttcttattttcaaggg
AAAACCAAGTTTATTTAGGATTATTACCCTATTTTTACTAATTTGACCTC
TATGTTGTAAAAGACAGCATTTCAACAAATTATCGAAACAATAGGGCACA
TTTCGTCTGTGATTGCTCTGTCTGGTGTCTAAAATTCATATTGCAGATCA
TTGACTCAGAAAGGATAGAGGTAAAACAGTGTTTACATTTAAATATCAga
ttttattattatattatattctGTATTGGATTTCAAGCTAAGCAAACTCG
TTAACGAAAAGATTGCGTTCTTATTGATGAATAATCAGATGTCTCGTGAt
aaaaatttgtctatttttccatattttgagatttgaaatttgaattcccG
AAAAATTGTTTCTTGCTCTCATCTTGCGTTGctattcctttgttttcttg
ttaaaagttaaaataaaccagccgaggctggaaggtcagccaaaagAGCT
AAGAGGGTCAAAGGGGTTAGAGGGTCAAAGGGATAATGTTGATGAGATAG
ATGCGAGCAAATGTTAGATCAGCGTTCGATACAATGGCAATTATCTGCCG
GTTGAAAAGTCCAGGAACCTCGCTCGTTTGGGATGTTAGTTAAtctagtg
taattaaactttttgttcattttagtcagttataatacattttttctgtt
gggtgtagacaatatccatatctgaccaaagtgttatactacaaataaat
aagaaaattgccaaaaagtcAAACCCAAAATAAAGATACATGCCATAATT
TTAGTGCAGAAccatttttagttttcattacatagaaactgtactttttt
tgtttacttgataaaacCCCAATAACACTTTGTCGTAACGCTCTGCAGGA
GGctccccccagcggaccctcaattcatgCAATcacgaaattttttttcg
aaattcacgcactcacgcaaattttcctcgagtttcacgcaataacctga
tttttcagaaatcggaaaattttctgggaaacattggaaaatcgggaaaa
ctgcacataatcggtggaaaaaaggggaaattcacgtattcacgcaaaaa
atagcccagattcacgaaTTCTCGCAAtcaaaaagtacattttcacgttc
acgcaagttttttcaattcacgcattcacgcatttttttttcaattttca
cgcattcacgcaaccgaaaatacCCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCTCATTCTTTTAAATTGACCATCTCTCTTTTGTTTCAAAGTCCCAAATC
TTTCTTATTGTATTTTTCATCTGATATTGgaatgatttcaaaaaaataat
aattcaaaaatagtataatcttcaaaaatacaaaaacattcttttctttt
taatttagaTCTTTTTAAGCTGCTTATATATCAAATCTTTTCCTTTCCTT
AAAATGACTGATATTACATCTTCAGTATATATATAACTTtgtgagaaata
tttttatccttCATAACTTTCTAAAGcaggaacaattttagtctgtATAC
TTTACCAACTTCCAATATATAACACCTTGTCACAATATTCTCTGCAGCTC
CTACCAGAAATTGTAACTGGTCGCCATTAACAATTTTAAGCTACAGTAGT
CACAAACCGCACACtctagaaaaacacaatttgccaGAGAGTGgccatgt
tgtgtaacttgatggTATTGGTATATATATATACTTcattaaaaaatcta
gaaaCCATTTCTCATAACTTTccgcagtccgctttctgcaagtccgATAA
aacataccttaaaggaagaaattttggcggaaagaaaatttggcggattt
aaattcccgccaaattaaacattttgaaaatatgatctcttttaaggtgt
ttttgctatttttttgctgttttgacgccatcttaaggttaaatttttaa
gcgaccgccaaattaaattcccgccaaattaaacattttgaaaatatgat
ctcttttaaggtgtttttgctatttttttgctgttttgacgccatcttaa
ggttaaatttttaagcgaccgccaaattaaattcccgccaaatttagttt
tttcgtccatcctccaagttaaattccctctgaaaaaacttttttcgcca
tccgccaaattaaattcccgccaaaatttcttcctttaaggaaTGTAAGT
CAGAATGCATGCTGTAAAAACTGTTGTCACCATTCATTCCATATCAACCA
TTTAGTTGAAGCCAAAAACGTGCGCAAAGATCAGAAAAATCTACCGACCG
AACGACCCACTTTTtgaagtagaaatgacgggaaccaaacaattttttgc
gatacGCCTTATATAATATGACTGAAGCCACAACCTTGCCGATACACAGG
ACATTCCGGTGCAGTTTGTCAGGTGCGCAAATATATGGATAAATCACTGG
ACAAAAGTTCCGGTGTACTTTGTTTCCGAGAGAAAAATGTACCAGACAAT
CCGGTGTAGTCCGGTAtgcacttttgaaaatttaatgaagaaaaCACCCG
ACAAAAATAATGCCGGAATGTACGGTGTATTGGCAGGGTCGTCTGAAgcc
aaacacgtccaagtccaaaaaaaacaagattgcatccagtctttatcaaa
tttagacagtagctgtacttttgtatgctttatcaaattccaatagcatt
ataacaccatcaaccCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNGATCGGGAAATCGGTTTTAAatgttccaaaattttgat
CCAGAGCTTcaccagcgggaaaaaaatcgcggaaccgatttgaagggtca
ccgaGGCTGaccaaaaatggcaaaaatattttaaaggtcAGTCTCAATGG
GAAGTATCTAAAAGCAAAAATATCAGACTATCTGATTATCCTTCTAAGat
atataaatattaaatgacAATTGATTAACGAAATTTTAGAGATGTTTACT
TTTGTCAACCTTCATAAGAGGTGGTTTATAAGCATCTTTGTTGTTCTTAT
ACACTGTTGGTGGCTGAAAAACTTGGTTGCCATGGTGTTTAGCCATCAAA
TACTCGATCATGGATGGTACATCATTATTCGATTTTCTTAACATTTCACG
TAAGCTTTCTTCAGATTCCCCTTGTACAACGTCTCCATACACTTTTAATC
GTTTGACCAAATTTGTCAACTTCGCATCATCCTCACGAACATCAGAACCA
TCCTTCTGATCGAAATTCTCAATTATTTGTTGGCAATGCTCCTCAgtata
tttcttatgtttgGCTTTACTTGCATTTGCAAGCAATTTGGCGATAGTAG
AAACCATACCTTTGCCATGGACCACACCCTCGTGGTATCCCTCGAAAACG
TCATCGCCCTTCCCCAAACAgtatttggtcaaaatatcgcaATTGCACAA
CTCTATGTAGTAACCATCTGGATCTCTGAAGAAGAATTGACGAACGATCC
CTTTTTCATAATCTCCTTTGGGTACGGAAACGTTTGTTTCAAATGGCACT
CCCATATTTTCCAATTTCACCAGCACCTACAATGAAGTAAACATTGataa
cttttttatcaaattcacGTACTTGACAACCTTTGATGAGCTTTCAGCGG
CGCTTATAAAAGTAGGCATAAACTATAGCCTCGCTCGAAATTACTCGAAA
AACGAAGTTGAAAATTTAATCCTCCTGTTTTTTAAATGTCACGACGGTTC
AAATTGTTTGCTTTTATgaaccaaattttattttaaaatgctTCTATCAA
TCGATTATCGCctaaagttttattttcaattttttacctGCTCTATGTTG
TTGCTTTCCAATGAAATATGACTGACGATCAAATCTTTGCCAGATGGAAC
TACAGGCTGACCCAGAATGAGTCTCTAGTTCAAATAGTTCAATATTGCCC
ATGGTAAGCCAAGCTCCATGACGGTCGAAATTGGGTCGTTTGATTTGTTG
AAGGCCAAGAATGTCAGTATAGAATCCGAGAGATCGCCCGATGTCGCTGA
CTGTCAGCGCGATGTGATTAGCCTTGTGTATCAAATCACCTGAATGTTAC
AAAACAATGAGAAAAGTTCACACAAGATGTAGAAAACTTAtatgaaaatt
gataaagtggagtctccattactcgaaccgcaaatttgttcgagttaagg
gaaTTTCGAAGTTTAGAAGGCATTGCTAACTGAAGGgatgagaaaacttg
ttcgatttGAGGAGATATTCGTGTTAAAGAGgtttgagttaaagagactc
gCTGTTTATCAAATTAACAACAACTAAAAACTTGAATAATTGTTATCAAC
CAACAAAAAATACATTGGAGGATCAACTCGAGTAGCGGTGACAACCCTTT
CCCTATATAATTTGGTTGGGTTTCTTCTACTTTTTATTGAAGAACATTGA
GAAGTTGTAAAGGAGGCTTTATGGCTGAAAAACAGGGCAAAAAAGGtgct
ttgaaaaactttttcactaaaatcaaCTATCGTAGAATGGATTGTTACcg
taaattttctaatttaacgcgtggcaataaataattattcTGGACGCTAC
TTGTGAACAAATAAAGAAGAATTAATTACGAAATTCAATAATTAGGGGAA
AATTAAACTGATCGCGCTAAATTCGAGGTAAAGATCTTTATTTGAGTCAG
GGTTGTACTATATATATTACATAGTGTACCATATACTTTCGAACTCTACG
AGTGTTTTTCTTCTGTTTCTTTAAAGTTCTTGCCTCAATTTCCTTTATTC
TTTCTTGGCAACCCTCTAAGTTTTCATGTCTAAGGCTTGACCACGCGTGA
TAATTAGTAAAATTAATTAGGCAAAATTTCGGCTACGCTTTAAAAATTAG
AGTAAGAATAATTacgattttttgctaaaaacagGGTACGCGTTAAATCA
GAGTACGCGTTAAATCAGAGtacgcgttaaattagaaaatttacgATACC
CAAAATCTAGGACTAGGTAGACATTCTTTTAGCTGGAAAGTGTGCCATTG
TTAAATAGCAAATCCTATCCAAGTCACTTGACAATACAATGTAATTTTAG
CGCTTGatcaatcagaagctttgcggattttcgaaaacaatagcaacaat
atttttttgtcatattcacttttttttgcttgaaaaaggctttccatcta
gcccttcgggctttacagaaatctgtggttgttctaggtggaaaattttc
gaacgATTTTTTAGTGAGGGACACGTGTCACACATCCAAGTCAAACAAAC
TTACCGAGTCCTCTCCTTGGTACTGAATCGTCCCAATGTAATTCCATCAC
TTCACTTTGTGTCTTGCTTCTCTCGATATATTTGTGATGTTTAGCTATAT
TGAAAGTTATGGAGTGATGTCCTTGGAACTTTTGAATCAGATTGCGATTT
TGTTCTCGTCAAGTATGCTTAGCGACTAAAATATAATGATGGGAAAGTCA
TTTTTACATTAAGGTTGTATATGAGTTTTTTCAAAGGATTTCTTTTGTGG
TCACAATTTCTTAGCAACATAAAGATtggttttattgatttttaagagat
ttaaagatttttagcAAATACAGGATCGGTCGAGTCCATTGATATCAAAA
ACCCGAAGGGTTAGGTTTGAAACTCTTagattatttcccatccaagcttt
ttcttgcttgagaaaggttaatGATTCCTTTCTAGCTCCTTCGgggtttt
aaactcaatggtcggACCAATAAAAGCTTTAAATGGTAACTTTACACCGT
TGAAATAGTTGATTTATAGAACTTGAAAGtagtagaattttttttgcaat
tttgaagaaaatgctTAAATATGAGTCATTATCTATAATGAGTTATTCGT
TCGGACTATTGTTCGGACTATTGTTCGGCACCTAAAAGGTTCTGCGCAAC
CTTTTGGAGTTAGGTGCCTCAAGGAGTCAATATTTGCAGATCTATCTTTT
TTCTAATGCTTGTCTTGACTAACTTTCTTTCTAGCCTTCTATCAACTATG
ATTGTGGtcacatttttttattagaacgttTAAATTTGAGCTGAGCCTTG
ATGTGCTTatctttttgacaattttgagcctaaaatgttcttattagcGT
TCTTTAAATTGATtcactaaaatatacaatatTACCTTGGGTTATAAAGA
CTGGCCCTCAAGTCGAACAAATTTGCTTTAATTTAAAGTTgagaattaaa
agaattaccCTAATACCGAAAGTTGCAAATTTAAAGAAATACTGCAACTG
TGAAAGTTTCTTCgagtttcttttaaattcagatAATTTTTAGCGAATTC
GGCtgatcttttcaaaatttttagactGGTCATGTTCTTACAATGTTTAA
AGCCTTAACTTTGATATTAGACTATAACTTTCATAAGAACTGTATCCTAG
GatttgattttgtaattttgctAAAGATATTAAGTATTTTTAAATACGAA
CAAGAACAACTCCACCTCCAGCGCCGCGCGAGCACAATTTTTCTATAAAT
TCTGTTTTGTTAGCATAAAAGGCGCAATTTCCTTCTATATTATAAAAATC
GATATCTTTATGGGCACAGTCTTTGTGTTATGAGTCTTTGTGGGCACACC
CGATTTTTTGGATATTTCACAAAACtggtgaaaatcaaaacatgctaaga
atatatttttttggcttgaaactcaaaacagttttggatgttcttatcaa
aaaaacGTGTTGGAACTGTGTGATTCCGTGCACAAAGTTGAATTGAAATA
GATTGACTTATTTAAACTTAAGTTGACTAAATTGAATCCTCCATGTTGGC
GTCCACGCGCAACGCTTCTTATAGCTTGTCTGATTCTGATTCTGATTCTG
ATTTGACATGAAAGTGGAgtgaaaaaattgacaaattatTGTTTCAAATT
GAAACACTaaactaatttatttttttgtcttcgaaacaaaagtaatttta
tttatttccttATTCTCCAAAATAAAAGACTGATAAGGCCTTAAAGAATC
AGAAAGGGAGTAAAAAATAATAGACACAATGTATAACGCGAGACAGCTTC
CACATTTTATTGTGTTAGTCAAGGGTCGAACCAAAAGGTTGGCTTTCTCT
AAAATAGTACAATTATTTTCTCTAGGtacaaaaattaaacaaacaGGGAA
AAGCTAAACTaaataaataatcaaaaaatacGTCCGTCTTGGTCTCATTA
CTTTTATCTCTGCTGAAAACACcatgaaaagataaaaattattttatcat
gACGCAAATTTTGTATCATTTCTTTTATCTAAccatagtctagcaagcta
gacaacTGATTCAGACCAAGAAAgtttcagacatagtagaaatactaaag
caaaaagtaatggagggaacaaatttagtttatacaaactaaatcccgta
caATAATCGTATTGTCATATAACGCATATATTATATAaacattataaacg
actccagtctaatacGAGACCCTCTTTAGAGGGTGTCGCTTTTTTCGATA
CTTTATATAGCCTTTTTAAAGAAACCTGGGTTCTTTTGGATCTTTTTAGT
GTACAAAAACACGAAACTAGTCTTGTATTTTCATCTCATTATCATTTTTT
AGAATTTCCAAAAGGATATGTACCTCCAGAAATCTTCAGCTATGTCAATT
CTGCAGGTAATTCGTACTATGTTCCTCTAATAAAAATCCACCACTTCAAG
TCGAATGGCACTTCTTTAATTGCTACATAACTTTAATGGATATATAATTA
CGTAGGGATTAAGTTCGTGGATTCCGCAAATAGGTGCTCGGCGCGATGAT
TAATTCTTCAATGTTTATTGAATCCCCAAATGATCATCTTTCAAAGTATT
AACCTTTTTAACGggctgtttatttttcttttcacagGAAAACAGATCTA
CGGGATGTTATTTAAACCGTTGAAATGCGTGCCCGGTGAAAAATATCCAA
CTTTACTCTACGTCTACGGTGGCCCTGGCGTGCAGGTAACACACCACTAG
TTTTTAATGACTCCCTTACAATACTAATTGCATATATGTAATACAATATG
GCTCAAAATAGATTATTTTTTAGGTCCGCCCTGATATTGGCAGGGTTAAT
TTGCTTCTCCCGTACCCCTATACTTATCTTATTGACATAGCATATTAAAC
CCAGGTGTTAATGAGGGCCAGAATAAATTCCACTATGagactagactaga
gtctactcctggctgaactttgctttctaataacttttgatgacgctgag
tccagtgaagtagactaggagcatttgacgaggttgccattttgaaaaaa
aaacgtttaaaatccaaatgacaaaaaagttacttgaagtcgaaaaatat
aattaagaatgaaaaacaatcatctataacagattttgaatccgttaatt
tcagataaaaacattgcttcattctttttttacctggcaaaaacaacgaa
aatttacagtccgcctaagcaaaagcatattaccatataccttatcgggg
aaaacttcgtcggggaaaattttcgtcacttggccaaaatttcgtcactt
ttccccgacgaagttttccccgataaggtcctaccgggccacttaatcgc
gccatccagtctataaaaaagtaTTTAGTGGACCCTGGGCTACTATGAGA
CAAATCTCTGATATATAAACTTTGTTTCTCTCGTTTTAGTTGGTCAGTAA
TTCTCAGTACTCAGTTCGTCGAGTGAACCTTTATGCTTTGGCAACCCTGG
GTTACGCAGTTGTTTTCATTGatacaatgggctcttccaatCGTGGTGTC
CAATTCGAAGCagcaattcaaaataaaatggtaTATCTAAATAATGCtac
tgttttttgttttcttttttagaaagcTGGATCGCGCTTAGAACTTTGTG
CAATACTAAGGCTTTAATCGACCTCATTTGTTTTGGCTGCAATTTCAAGC
GACTATTAGTTAACATAATAGTAAGATTATAATAGATAAAAAGTTGAACA
AGACTaacagaaattcttttttttattgatgtAGGGCACAGTTGAAATTG
ACCAACAGATCGAAGGACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034897XLOC_034897Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055459-exon-scaffold_253-1491911889:1249834..1249917TCONS_00055459-exon-scaffold_253-1491911889:1249834..1249917Clytia hemisphaericaexon
TCONS_00055459-exon-scaffold_253-1510915933:1249834..1249917TCONS_00055459-exon-scaffold_253-1510915933:1249834..1249917Clytia hemisphaericaexon
TCONS_00055459-exon-scaffold_253-1575043694:1249834..1249917TCONS_00055459-exon-scaffold_253-1575043694:1249834..1249917Clytia hemisphaericaexon
TCONS_00055459-exon-scaffold_253-1491911889:1250335..1250458TCONS_00055459-exon-scaffold_253-1491911889:1250335..1250458Clytia hemisphaericaexon
TCONS_00055459-exon-scaffold_253-1510915933:1250335..1250458TCONS_00055459-exon-scaffold_253-1510915933:1250335..1250458Clytia hemisphaericaexon
TCONS_00055459-exon-scaffold_253-1575043694:1250335..1250458TCONS_00055459-exon-scaffold_253-1575043694:1250335..1250458Clytia hemisphaericaexon
TCONS_00055459-exon-scaffold_253-1491911889:1262436..1262489TCONS_00055459-exon-scaffold_253-1491911889:1262436..1262489Clytia hemisphaericaexon
TCONS_00055459-exon-scaffold_253-1510915933:1262436..1262489TCONS_00055459-exon-scaffold_253-1510915933:1262436..1262489Clytia hemisphaericaexon
TCONS_00055459-exon-scaffold_253-1575043694:1262436..1262489TCONS_00055459-exon-scaffold_253-1575043694:1262436..1262489Clytia hemisphaericaexon
TCONS_00055459-exon-scaffold_253-1491911889:1262721..1262818TCONS_00055459-exon-scaffold_253-1491911889:1262721..1262818Clytia hemisphaericaexon
TCONS_00055459-exon-scaffold_253-1510915933:1262721..1262818TCONS_00055459-exon-scaffold_253-1510915933:1262721..1262818Clytia hemisphaericaexon
TCONS_00055459-exon-scaffold_253-1575043694:1262721..1262818TCONS_00055459-exon-scaffold_253-1575043694:1262721..1262818Clytia hemisphaericaexon
TCONS_00055459-exon-scaffold_253-1491911889:1263523..1263663TCONS_00055459-exon-scaffold_253-1491911889:1263523..1263663Clytia hemisphaericaexon
TCONS_00055459-exon-scaffold_253-1510915933:1263523..1263663TCONS_00055459-exon-scaffold_253-1510915933:1263523..1263663Clytia hemisphaericaexon
TCONS_00055459-exon-scaffold_253-1575043694:1263523..1263663TCONS_00055459-exon-scaffold_253-1575043694:1263523..1263663Clytia hemisphaericaexon
TCONS_00055459-exon-scaffold_253-1491911889:1263868..1263902TCONS_00055459-exon-scaffold_253-1491911889:1263868..1263902Clytia hemisphaericaexon
TCONS_00055459-exon-scaffold_253-1510915933:1263868..1263902TCONS_00055459-exon-scaffold_253-1510915933:1263868..1263902Clytia hemisphaericaexon
TCONS_00055459-exon-scaffold_253-1575043694:1263868..1263902TCONS_00055459-exon-scaffold_253-1575043694:1263868..1263902Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:1249834..1263902 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.78139	6.37965	2.99917	1.97996	10.6586	11.3766	8.09237	13.5811	5.9289	8.83056	2.48554	5.78824	6.3748	9.98873	5.05319	8.07777	6.28922	8.14682	3.7796	7.20495	5.54218	7.08892	7.35841	11.3138	9.87416	7.24893	6.43588	3.63309	7.18037	9.4617
Blast
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BLAST of TCONS_00055459 vs. Swiss-Prot (Human)
Match: DPP8 (Dipeptidyl peptidase 8 OS=Homo sapiens GN=DPP8 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.005e-35
Identity = 80/185 (43.24%), Postives = 110/185 (59.46%), Query Frame = 1 
Query:    4 YCVSLQKPRLVQRLTKMGYSHAVTLNKDCXXXXXXXXXXXXXXXXNLCRILQNPSPHLNGTG-----W---LESPREFPKGYVPPEIFSYVNSAGKQIYGMLFKPLKCVPGEKYPTLLYVYGGPGVQLVSNSQYSVRRVNLYALATLGYAVVFIDTMGSSNRGVQFEAAIQNKMGTVEIDQQIEG 534
            Y VS   P  V RLT  GYSH+  +++ C   +   S+  +   V+L ++    SP  + T      W   L+S    P  Y PPEIFS+ ++ G  +YGML+KP    PG+KYPT+L++YGGP VQLV+N    V+   L  LA+LGY VV ID  GS +RG++FE A + KMG +EID Q+EG
Sbjct:  553 YVVSYVNPGEVTRLTDRGYSHSCCISQHCDFFISKYSNQKNPHCVSLYKL---SSPEDDPTCKTKEFWATILDSAGPLPD-YTPPEIFSFESTTGFTLYGMLYKPHDLQPGKKYPTVLFIYGGPQVQLVNNRFKGVKYFRLNTLASLGYVVVVIDNRGSCHRGLKFEGAFKYKMGQIEIDDQVEG 733
The following BLAST results are available for this feature:
BLAST of TCONS_00055459 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DPP81.005e-3543.24Dipeptidyl peptidase 8 OS=Homo sapiens GN=DPP8 PE=... [more]
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