TCONS_00055489 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00055489
Unique Name	TCONS_00055489
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1863

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_253:360524..366692-
coding sequence from alignment at scaffold_253:360524..366692-

transcript sequence

>TCONS_00055489 ID=TCONS_00055489|Name=TCONS_00055489|organism=Clytia hemisphaerica|type=transcript|length=1863bp
tcaaaataagaaaatataagtGAAAAGTTCCACCATCTCAAAACACATGA
TATTCCTGTACAATGAAAGTGAAACTGACTTCAAATTCAAGACTATAATG
GTAGAGCGGTATCATACTTTGGTACACAATGGAAATGCCATTTACATACC
TCAATGGATCAGGATGACTGAATGAAGTCCTAGATACATTCAAGGTTGTC
CTCTGAAGTTCTTGATGGAGAAATGCGGCTATTGACAGATCTAGCTATTC
ATTGTTGAAGACTTTGGTTTAATGAAGACATGAAAATGATTTTCCAGTGG
AATTGATTTGAGGAAGTTGGTTCAGGAGAAGAGATGAGTTTTCACAATGC
CATCTCAGgaactCCTGGCATCATTTTAATAGTTGTGATTTCGTTCGTTT
TGATCCTGCTCATTTGTGCTGCTCTTTATctcctcaaaaacaaaaaacca
aaGAACGTCCGACAGTCGATTTTTGATCACGAAAAACAAATCAAGTACGG
TATACTAGACTATCCGCAGTCTGGAACTCCAGAATTTCATCCAAACCCGA
TCCAGCCTCCTTAtcaaacgaaagtgaaagtgaaattaATACCTAATAAT
GCGAAAACAAAGACGTCTATAAAATACACAGAACTCGGCGAAGGTGTTGA
AGAAGCTCAGGAGGACCATAAAATTTTGGATGACCTCTCCAGTGGAGAGC
ACTCACCCAATCAAAAAGATTTCCGCAGGTCTGTACATCTTTATAAAGAT
AAAATCACAAACTTTATTTCCAAATATCGTGATGATCATGATTTATCGTC
TTTACCACAAAATGATACGGAACGCAGGATCTGGCAACCGGAACCAGTTG
CGGTCAATCAAACACACCGTTTACAAAGACCAGATAGTGTTCTTTCCAAT
GAACAAGAAATGAGTTTAGGACGATTAACTTTTACCATGTATTATCTACC
TGGCGATGAATATTTAACTCTACTTTTGATATCTGGTCGACAATTGAACT
CATGTGATTCCTTATATAACATTCGTTTGCCAGCTGTCAGTATCGTCATC
GAAAATAATCCCAACACCGAAGTCACTTCAAACCCGGATGAAGCACCTAA
TCCGGAATATGACCAAGAATTCACTTTCACTATCCGCTCAAAAGAACTCT
TCGATGTGGTATTACGATTTACTGTTTGGGATATTATATCGAATAACGAA
ACCAGAGTGCTTGGCTTTTTTCGTGTACCTTTAGCACAATACCAAAAGAC
TCTATTAGCTGGTTCTGATACAGGACCGATTTGTCGTGAAatacaaccct
gtctcaatccTCCTTCTATGGTACTTGGTCAATTACTGATTTCTCTACTT
TACGATTGCGTGACTGACAAAATCTTTGTCACTGTGCGACAATTTCATCA
ATTATCTGTTTCCAAAGATGATCTAGaCATGTATTTGAAAGTATCTCTTC
TCTTGGATAATGACATAATCGTCAGTAAACGTTCCAAAACCTTCACATCA
ACTCGTGATCTACATCTTACACAAACATTCGAATTCAGTGCTCTCTCTGA
TGAACTCGATAAAATGTCGACGGAGACAAGTCCTATATTAAAAGTAGCAG
ATGAGCTCATAACTAATGCTTCTTCTAACTATAAAAAATCACTGGTCATC
AAAGATGTGCGTTCAGTTCGCGAAACTTTTGCATCAGATACTTTAAAGAA
CCATATGGGTGTTTTAATTAGTGTGCGTGCGACCACGGGTACAACGAGGA
ATAAGCGAGTGATTGGACGACTTTACCTTGGTAAAACGAACTTTCCTTTT
AATGATGAGGAATTTCACTGGGTTGAAATGAAGTTCGATGCAACCTTAGC
CCTGAAATTCCGG

Run BLAST on NCBI

protein sequence of TCONS_00055489-protein

>TCONS_00055489-protein ID=TCONS_00055489-protein|Name=TCONS_00055489-protein|organism=Clytia hemisphaerica|type=polypeptide|length=510bp
MSFHNAISGTPGIILIVVISFVLILLICAALYLLKNKKPKNVRQSIFDHE
KQIKYGILDYPQSGTPEFHPNPIQPPYQTKVKVKLIPNNAKTKTSIKYTE
LGEGVEEAQEDHKILDDLSSGEHSPNQKDFRRSVHLYKDKITNFISKYRD
DHDLSSLPQNDTERRIWQPEPVAVNQTHRLQRPDSVLSNEQEMSLGRLTF
TMYYLPGDEYLTLLLISGRQLNSCDSLYNIRLPAVSIVIENNPNTEVTSN
PDEAPNPEYDQEFTFTIRSKELFDVVLRFTVWDIISNNETRVLGFFRVPL
AQYQKTLLAGSDTGPICREIQPCLNPPSMVLGQLLISLLYDCVTDKIFVT
VRQFHQLSVSKDDLDMYLKVSLLLDNDIIVSKRSKTFTSTRDLHLTQTFE
FSALSDELDKMSTETSPILKVADELITNASSNYKKSLVIKDVRSVRETFA
SDTLKNHMGVLISVRATTGTTRNKRVIGRLYLGKTNFPFNDEEFHWVEMK
FDATLALKFR

Run BLAST on NCBI

transcript from alignment at scaffold_253:360524..366692-

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00055489 ID=TCONS_00055489|Name=TCONS_00055489|organism=Clytia hemisphaerica|type=transcript|length=6169bp|location=Sequence derived from alignment at scaffold_253:360524..366692- (Clytia hemisphaerica)
TCAAAATAAGAAAATATAAGTGAAAAGTTCCACCATCTCAAAACACATGA
TATTCCTGTACAATGAAAGTGAAACTGACTTCAAATTCAAGACTATAATG
GTAGAGCGGTATCATACTTTGGTACACAATGGAAATGCCATTTACATACC
TCAATGGATCAGGATGACTGAATGAAGTCCTAGATACATTCAAGGTACCT
AAAGCGTCGTTTGTTTGTTTGTTTTTATTCGCCCTGCATACCTTTTGGTA
TAAAATTCTGAAATGCCGATTCAAATATTTTTCATCCATTTTGTTGATCC
TGATTCTAATGAATATGAAATAAATAAATTAACTCGATATTTTCTTTTAG
CAGAAACTTCTTATTGGACTCATTTAGATTTCCTTGTCAAGTCTTTGTGT
GATAAACGACTTATTTAAATCATACCCCATTATGAAATATTTTTACTTGT
AGGTTGTCCTCTGAAGTTCTTGATGGAGAAATGCGGCTATTGACAGATCT
AGCTATTCATTGTTGAAGACTTTGGTTTAGTAAGTATTGTGTGTTGAATT
CTGCTACTCAACTTTTTGGGGTAGTTAAACCATGTACAACTTGTAGTGTA
GACGTCTTCTTTTTCGCTTTCAGAAGCAACATTAGAACGTTTTTCCCCCG
TTTTTTTTTACCTGGTTGTATAAAACGATGTATTCATGTTGTGACATTTG
TGACTACTTATAAATATGTTCATCAAAATTGTTGTCTGTGTTTTTTACAT
TATAAAGTGTTTCCTCATATATACTATATTTAAACCAATCTTTATTGAAA
AGAACAGTATTGCTGTCAACCCCTTTTGAAATGCTTAAAAAATAGTATTC
TCTTTTGTCCTCTTTTGATTGCACTGTTTGAATTAAAAGCATGTTTCTTA
CAAGAGATTCTTTTTGAGTTGTCTGAAGAGTACCAAATGGTCTTACTAAG
CTGTATTCAATGTTCTTTTTGACTGAAAATTTTACTGCATAAATTATAGA
TATTTCTACTTGAACCAGAATTTTACAAATTTCCCTGTTAAAAGAAACTT
AAAGATGACGTTTTTATAATTTGCTGAGTGAACCCAGTGACGTAGAGGTA
GTGTTTTCTTTGATCAGTGCTTTTTTCGTATGTTCTTGACAACTATTTTT
GTATTCTTTTGACTTGTTTTAATGAGAAATACCGTGGTTGTGCCAACGCT
TCAAACATCATCCAACAATCGCCCCCTTTATGTGAAATTCAGGAAACGGA
ACACGGGCTACATGAAAAAAGATGATAAAACCTTTTCATTGAACAAGTGA
ACAATCTAATCTGCTCTATTCTGAAATTGTTCCTTACCAGTACGAGAGAG
ATTGTTTAAATAAATGCCATTTTTTATTAATTCTAATAACAGCGTAATTA
CATAGCTCATCTTTTTTCTCCACAAACGCGGGAATTGACAATTAGATTTT
TTGTCGAGAAAAAAGAAAGCTTAATAACTCAGAGTGTTGTCAGAAAGTTA
TGCTATATGATAAAAGTGATTTGATCAAAAAATCTCAATTTTGATTTTGT
TTTATGCGTCGTTTTAATCTTTCTATTGATTTTTTTTGTAGATTGTTTGT
GAATTGTGATTTTTTTGCCCCTTCTTTGCGTTGGTTTTGAGTTGTATTAA
GGTTTCATTTCGAGCAAATATTTGGATCAATGAGTGTACTATATAGCAAC
ACTCTGCTATCTTTTAAACACAACTTACTGCTTACAGAATCTTCATAGTT
TTTTTACTACTCTTCAGATATGACTTTTTAAATTGGCTTAATGTTGGAAA
GAATTGAACAAAATGTTTTTACCTTATTCGTGCCTTTCGATAGAGATCTA
CGTAATGGAGGCAGTCTTTGCTTAAGTGTAAATGTAAATTGTAGCTATTT
GACATTTGGCTTTTAGAAAGATATTTGCATTTATTAGAAATTTCCTCACT
AAAAGCTCACGAGAGAAATGTTATTTCCAGCGGCAGATTATAAGATTTTA
TATTCGTTTTGAATAAACTCTGTATCAAAGTTTGGTGTGAATGAAACCTT
TGCATCTGCTTCAAACTTAGCTCGCCATGCTTTCTTTCAATTTAAGAGAC
CCCAGAGCGCTTTGCCTTATATACTTTTTACATTTATTCCTGATATATTA
AAATGTGCTTGCTTTTTTAGATCTTAAACTTTTGATCAGTTTGAACTGTA
AACTTTAATACTTTTTCATTAAAAACTGCTGGATAAACTGTTTCTTTTTT
GTAATTTTTCTCAAGATGAAGACATGAAAATGATTTTCCAGTGGAATTGA
TTTGAGGAAGTTGGTTCAGGAGAAGAGATGAGTTTTCACAATGCCATCTC
AGGTGAAAAATATTCCTACTTAATGCACTACTTTCGATTGGACATTACTA
AATGACTGATAATACCTTATTCAGGATATGAGATACACGAAGAACACTTT
TTTTAATTTCCTTCAGTGGTATGTCAATATCTTCTAAATGCATTCCATAT
AAACAAGTGGTTTAGATTTTGAACTTTGCTTCTTTTTTCATTTTCAGGAA
CTCCTGGCATCATTTTAATAGTTGTGATTTCGTTCGTTTTGATCCTGCTC
ATTTGTGCTGCTCTTTATCTCCTCAAAAACAAAAAACCAAAGAACGTCCG
ACAGTCGATTTTTGATCACGAAAAACAAATCAAGTACGGTATACTAGACT
ATCCGCAGTCTGGAACTCCAGAATTTCATCCAAACCCGATCCAGCCTCCT
TATCAAACGAAAGTGAAAGTGAAATTAATACCTAATAATGCGAAAACAAA
GACGTCTATAAAATACACAGAACTCGGCGAAGGTGTTGAAGAAGCTCAGG
AGGACCATAAAATTTTGGATGACCTCTCCAGTGGAGAGCACTCACCCAAT
CAAAAAGATTTCCGCAGGTCTGTACATCTTTATAAAGATAAAATCACAAA
CTTTATTTCCAAATATCGTGATGATCATGATTTATCGTCTTTACCACAAA
ATGATACGGAACGCAGGATCTGGCAACCGGAACCAGTTGCGGTCAATCAA
ACACACCGTTTACAAAGACCAGATAGTGTTCTTTCCAATGAACAAGAAAT
GAGTTTAGGACGATTAACTTTTACCATGTATTATCTACCTGGCGATGAAT
ATTTAACTCTACTTTTGATATCTGGTCGACAATTGAACTCATGTGATTCC
TTATATAACATTCGTTTGCCAGCTGTCAGTATCGTCATCGAAAATAATCC
CAACACCGAAGTCACTTCAAACCCGGATGAAGCACCTAATCCGGAATATG
ACCAAGAATTCACTTTCACTATCCGCTCAAAAGAACTCTTCGATGTGGTA
TTACGATTTACTGTTTGGGATATTATATCGAATAACGAAACCAGAGTGCT
TGGCTTTTTTCGTGTACCTTTAGCACAATACCAAAAGACTCTATTAGCTG
GTTCTGATACAGGACCGATTTGTCGTGAAATACAACCCTGTCTCAATCCT
GTAAGTCTAACACGAATTTCTCACTCGAGGTTGAAATAATGAGTTTTCAA
GAGATTAATAGCTCCATATTTCTCGCTATAAAATCATCCCGTTGATGGAT
GGTAGAAGATGAAGGAAAAGATTAGGAGATTCAAACAAACCTCAAAGGTC
GAACCAATCATCGGATTAACACCTTTCTTTTCCTAAACTAGTGTTGATTT
TTTTCTTCCCTCTCGAATGTGTTACGAATCTAACCTGTTCTGTAAAATCT
TAGAAAAGTACTTTTGCAAGCTCTCCCAGGATATAAACATTATATTTTTT
TAATAACTGGTCCTTCTTTCTTTGGTTATTTCAGCCTTCCACGGTACTTG
GTCAATTACTGATTTCTTNTTTCTTTGATTATTTCAGCCTTCTATGGTAC
TTGGTCAATTACTGATTTCTCTACTTTACGATTGCGTGACTGACAAAATC
TTTGTCACTGTGCGACAATTTCATCAATTATCTGTTTCCAAAGATGATCT
AGGTATGTTGTATAATCAAGGATAGTGAGTTTGAATTATTTCCGTTTAGT
CATATGAAATTCTGGTGGAACTTTTAACCCCTTTACTTTAAAAAACTCCT
ACAAGTTAAACTGGTTTGATGTAACATTTTCGTCACTGTTACCATTGTGT
TAAATTCTCGGAAAGAACCATAGATTTTATAAAGCCCGAAGGGCTAGATA
TCGTGCTTTAAGCCATCGCAGGCAAAAAAAATGAATATCGTAGAAAATAT
TGTTGCTCTTGTTTTCGAAAACCCGCGAAGCTTCTAATTGGTCAAGTGCT
TAAATTTTATTGTAATGTTACGTGACCTAGGTAGGATTTCCTACCTAACC
ACGGCACACTTTTCAGCCAAAGCACGACATCTAGCCCTTCGGTCTTTTAT
AAATAAATCTTTGGAAATAACCCCTTAATGTCATTGGTTGACACCTGTGA
CTCACCAGCATGTTAACGCTTTTGGTATTTATTTTCTTCTTCTTTCAGAC
ATGTATTTGAAAGTATCTCTTCTCTTGGATAATGACATAATCGTCAGTAA
ACGTTCCAAAACCTTCACATCAACTCGTGATCTACATCTTACACAAACAT
TCGAATTCAGTGCTCTCTCTGATGAACTCGATAAAATGTCGACGGAGACA
AGTCCTATATTAAAAGTAGCAGATGAGCTCATAACTAATGCTTCTTCTAA
CTATAAAAAATCACTGGTCATCAAAGATGTGCGTTCAGTTCGCGAAACTT
TTGCATCAGATACTTTAAAGAACCATATGGGTGTTTTAATTAGTGTGCGT
GCGACCACGGGTACAACGAGGAATAAGCGAGTGATTGGACGACTTTACCT
TGGTAAAACGAACTTTCCTTTTAATGATGAGGAATTTCACTGGGTTGAAA
TGGTGCGTAATTTTGATAGTTCAATCACACAATGGCATCATTTACGTCTC
GATAGGTTATGATAATGTCTCTGTAAAATCCGTCTTGAAATAGTGTACAG
TGGAAAATACAAATTTTGTTAGAATTCTCCAACTCCTTTTTGATATTCTT
TTACACGTCCAAAATTTTTGAAGCCTTCAGATGTTCTTAACTTTTTGAGT
TTTAAGCCTAAAAATGTTCTTAGAATGTTCTTAATGTCACCATTTTGTGA
GTATTTTTGTGTACTTAAGAAATTCTGAGAAATTAGGTGTTTTAGAGCCC
ATGAAGCCTTAAAATATTTTTAACTTGTTCTTAACATTTTGGTCATCGAA
GCCTTATGTTTTTATATAGTTTGTTCTTATAAAAAACGTGTATTGATGAT
AACCCCGGGGGGGGCACTGGGTTTGCGGACTGACGGTATGTGCGGGCCAA
AAACTGGCTTTTAAAATTGCACCCTTACAGTGCAGCAAAAATCAGTGAAA
AGCATACCCTTAGAGTGCATTTTCCCCCAAATTTTCGATCTCTTTCGTGC
AAAAAATGGTCAAAATTGTAGCATTTTTGGTCAAAATATCTAGGTTTTTC
AAGAAATTTTCTGAAATTTCTACCCTTACAGTGCACCTCTAGTTTTCCCG
ACCCTTACAGTGCATTTTAAGCATGTTGGAAAAGGTACCCTTAGGACCCG
CACATACCCGTCGGTCCTTTTGCCCAGCTGCCCCCCCCCCCGGGATGATA
ATCCACTCACTACTCACTAATAACCTCGAAACTGTTCAATTTCTATCAAA
AGTTGTAACTGAAGATTATTTAGAGACAAACCTTAAAATTGACTTTGTAT
ATACGTGTGTATAATTTTGTAAGATTATTTTTATGAATAAGAGTATGAAC
CGTCCTGGTTAAGATAAACGAAAGAAATGCCTGAGTTGTTAAGTTGGGAC
CTAGATAGAAATAGTAGTTGAGTTACCAATGTACACTTAAAAGTCTCACA
AAGGTTATTTTTAAAGTGTATATAAAGGTCGGGTCAGAAAAGGTAAGAAT
ACGTTAAAAATATTCTACCCTCAATTTTGGCAGATTCTTAAGAATACTTG
ACGCTCATCCAAAGTACACTATTCTTACAAAATGAAAAGCGTGTATTTAT
TGATTGTGAAATGTGAACCTCGAAAAATTAGAACCGAAAATTGACAACAA
AATTCTGTGTTTTTTTTATTCACACACGCACCTTAGAAGTTCGATGCAAC
CTTAGCCCTGAAATTCCGG

Coding sequence (CDS) from alignment at scaffold_253:360524..366692-

>TCONS_00055489 ID=TCONS_00055489|Name=TCONS_00055489|organism=Clytia hemisphaerica|type=CDS|length=7650bp|location=Sequence derived from alignment at scaffold_253:360524..366692- (Clytia hemisphaerica)
AAGTTCGATGCAACCTTAGCCCTGAAATTCCGGACATGTATTTGAAAGTA
TCTCTTCTCTTGGATAATGACATAATCGTCAGTAAACGTTCCAAAACCTT
CACATCAACTCGTGATCTACATCTTACACAAACATTCGAATTCAGTGCTC
TCTCTGATGAACTCGATAAAATGTCGACGGAGACAAGTCCTATATTAAAA
GTAGCAGATGAGCTCATAACTAATGCTTCTTCTAACTATAAAAAATCACT
GGTCATCAAAGATGTGCGTTCAGTTCGCGAAACTTTTGCATCAGATACTT
TAAAGAACCATATGGGTGTTTTAATTAGTGTGCGTGCGACCACGGGTACA
ACGAGGAATAAGCGAGTGATTGGACGACTTTACCTTGGTAAAACGAACTT
TCCTTTTAATGATGAGGAATTTCACTGGGTTGAAATGCCTTCTATGGTAC
TTGGTCAATTACTGATTTCTCTACTTTACGATTGCGTGACTGACAAAATC
TTTGTCACTGTGCGACAATTTCATCAATTATCTGTTTCCAAAGATGATCT
AGGAACTCCTGGCATCATTTTAATAGTTGTGATTTCGTTCGTTTTGATCC
TGCTCATTTGTGCTGCTCTTTATCTCCTCAAAAACAAAAAACCAAAGAAC
GTCCGACAGTCGATTTTTGATCACGAAAAACAAATCAAGTACGGTATACT
AGACTATCCGCAGTCTGGAACTCCAGAATTTCATCCAAACCCGATCCAGC
CTCCTTATCAAACGAAAGTGAAAGTGAAATTAATACCTAATAATGCGAAA
ACAAAGACGTCTATAAAATACACAGAACTCGGCGAAGGTGTTGAAGAAGC
TCAGGAGGACCATAAAATTTTGGATGACCTCTCCAGTGGAGAGCACTCAC
CCAATCAAAAAGATTTCCGCAGGTCTGTACATCTTTATAAAGATAAAATC
ACAAACTTTATTTCCAAATATCGTGATGATCATGATTTATCGTCTTTACC
ACAAAATGATACGGAACGCAGGATCTGGCAACCGGAACCAGTTGCGGTCA
ATCAAACACACCGTTTACAAAGACCAGATAGTGTTCTTTCCAATGAACAA
GAAATGAGTTTAGGACGATTAACTTTTACCATGTATTATCTACCTGGCGA
TGAATATTTAACTCTACTTTTGATATCTGGTCGACAATTGAACTCATGTG
ATTCCTTATATAACATTCGTTTGCCAGCTGTCAGTATCGTCATCGAAAAT
AATCCCAACACCGAAGTCACTTCAAACCCGGATGAAGCACCTAATCCGGA
ATATGACCAAGAATTCACTTTCACTATCCGCTCAAAAGAACTCTTCGATG
TGGTATTACGATTTACTGTTTGGGATATTATATCGAATAACGAAACCAGA
GTGCTTGGCTTTTTTCGTGTACCTTTAGCACAATACCAAAAGACTCTATT
AGCTGGTTCTGATACAGGACCGATTTGTCGTGAAATACAACCCTGTCTCA
ATCCTATGAGTTTTCACAATGCCATCTCAGAAGTTCGATGCAACCTTAGC
CCTGAAATTCCGGACATGTATTTGAAAGTATCTCTTCTCTTGGATAATGA
CATAATCGTCAGTAAACGTTCCAAAACCTTCACATCAACTCGTGATCTAC
ATCTTACACAAACATTCGAATTCAGTGCTCTCTCTGATGAACTCGATAAA
ATGTCGACGGAGACAAGTCCTATATTAAAAGTAGCAGATGAGCTCATAAC
TAATGCTTCTTCTAACTATAAAAAATCACTGGTCATCAAAGATGTGCGTT
CAGTTCGCGAAACTTTTGCATCAGATACTTTAAAGAACCATATGGGTGTT
TTAATTAGTGTGCGTGCGACCACGGGTACAACGAGGAATAAGCGAGTGAT
TGGACGACTTTACCTTGGTAAAACGAACTTTCCTTTTAATGATGAGGAAT
TTCACTGGGTTGAAATGCCTTCTATGGTACTTGGTCAATTACTGATTTCT
CTACTTTACGATTGCGTGACTGACAAAATCTTTGTCACTGTGCGACAATT
TCATCAATTATCTGTTTCCAAAGATGATCTAGGAACTCCTGGCATCATTT
TAATAGTTGTGATTTCGTTCGTTTTGATCCTGCTCATTTGTGCTGCTCTT
TATCTCCTCAAAAACAAAAAACCAAAGAACGTCCGACAGTCGATTTTTGA
TCACGAAAAACAAATCAAGTACGGTATACTAGACTATCCGCAGTCTGGAA
CTCCAGAATTTCATCCAAACCCGATCCAGCCTCCTTATCAAACGAAAGTG
AAAGTGAAATTAATACCTAATAATGCGAAAACAAAGACGTCTATAAAATA
CACAGAACTCGGCGAAGGTGTTGAAGAAGCTCAGGAGGACCATAAAATTT
TGGATGACCTCTCCAGTGGAGAGCACTCACCCAATCAAAAAGATTTCCGC
AGGTCTGTACATCTTTATAAAGATAAAATCACAAACTTTATTTCCAAATA
TCGTGATGATCATGATTTATCGTCTTTACCACAAAATGATACGGAACGCA
GGATCTGGCAACCGGAACCAGTTGCGGTCAATCAAACACACCGTTTACAA
AGACCAGATAGTGTTCTTTCCAATGAACAAGAAATGAGTTTAGGACGATT
AACTTTTACCATGTATTATCTACCTGGCGATGAATATTTAACTCTACTTT
TGATATCTGGTCGACAATTGAACTCATGTGATTCCTTATATAACATTCGT
TTGCCAGCTGTCAGTATCGTCATCGAAAATAATCCCAACACCGAAGTCAC
TTCAAACCCGGATGAAGCACCTAATCCGGAATATGACCAAGAATTCACTT
TCACTATCCGCTCAAAAGAACTCTTCGATGTGGTATTACGATTTACTGTT
TGGGATATTATATCGAATAACGAAACCAGAGTGCTTGGCTTTTTTCGTGT
ACCTTTAGCACAATACCAAAAGACTCTATTAGCTGGTTCTGATACAGGAC
CGATTTGTCGTGAAATACAACCCTGTCTCAATCCTATGAGTTTTCACAAT
GCCATCTCAGAAGTTCGATGCAACCTTAGCCCTGAAATTCCGGACATGTA
TTTGAAAGTATCTCTTCTCTTGGATAATGACATAATCGTCAGTAAACGTT
CCAAAACCTTCACATCAACTCGTGATCTACATCTTACACAAACATTCGAA
TTCAGTGCTCTCTCTGATGAACTCGATAAAATGTCGACGGAGACAAGTCC
TATATTAAAAGTAGCAGATGAGCTCATAACTAATGCTTCTTCTAACTATA
AAAAATCACTGGTCATCAAAGATGTGCGTTCAGTTCGCGAAACTTTTGCA
TCAGATACTTTAAAGAACCATATGGGTGTTTTAATTAGTGTGCGTGCGAC
CACGGGTACAACGAGGAATAAGCGAGTGATTGGACGACTTTACCTTGGTA
AAACGAACTTTCCTTTTAATGATGAGGAATTTCACTGGGTTGAAATGCCT
TCTATGGTACTTGGTCAATTACTGATTTCTCTACTTTACGATTGCGTGAC
TGACAAAATCTTTGTCACTGTGCGACAATTTCATCAATTATCTGTTTCCA
AAGATGATCTAGGAACTCCTGGCATCATTTTAATAGTTGTGATTTCGTTC
GTTTTGATCCTGCTCATTTGTGCTGCTCTTTATCTCCTCAAAAACAAAAA
ACCAAAGAACGTCCGACAGTCGATTTTTGATCACGAAAAACAAATCAAGT
ACGGTATACTAGACTATCCGCAGTCTGGAACTCCAGAATTTCATCCAAAC
CCGATCCAGCCTCCTTATCAAACGAAAGTGAAAGTGAAATTAATACCTAA
TAATGCGAAAACAAAGACGTCTATAAAATACACAGAACTCGGCGAAGGTG
TTGAAGAAGCTCAGGAGGACCATAAAATTTTGGATGACCTCTCCAGTGGA
GAGCACTCACCCAATCAAAAAGATTTCCGCAGGTCTGTACATCTTTATAA
AGATAAAATCACAAACTTTATTTCCAAATATCGTGATGATCATGATTTAT
CGTCTTTACCACAAAATGATACGGAACGCAGGATCTGGCAACCGGAACCA
GTTGCGGTCAATCAAACACACCGTTTACAAAGACCAGATAGTGTTCTTTC
CAATGAACAAGAAATGAGTTTAGGACGATTAACTTTTACCATGTATTATC
TACCTGGCGATGAATATTTAACTCTACTTTTGATATCTGGTCGACAATTG
AACTCATGTGATTCCTTATATAACATTCGTTTGCCAGCTGTCAGTATCGT
CATCGAAAATAATCCCAACACCGAAGTCACTTCAAACCCGGATGAAGCAC
CTAATCCGGAATATGACCAAGAATTCACTTTCACTATCCGCTCAAAAGAA
CTCTTCGATGTGGTATTACGATTTACTGTTTGGGATATTATATCGAATAA
CGAAACCAGAGTGCTTGGCTTTTTTCGTGTACCTTTAGCACAATACCAAA
AGACTCTATTAGCTGGTTCTGATACAGGACCGATTTGTCGTGAAATACAA
CCCTGTCTCAATCCTATGAGTTTTCACAATGCCATCTCAGAAGTTCGATG
CAACCTTAGCCCTGAAATTCCGGACATGTATTTGAAAGTATCTCTTCTCT
TGGATAATGACATAATCGTCAGTAAACGTTCCAAAACCTTCACATCAACT
CGTGATCTACATCTTACACAAACATTCGAATTCAGTGCTCTCTCTGATGA
ACTCGATAAAATGTCGACGGAGACAAGTCCTATATTAAAAGTAGCAGATG
AGCTCATAACTAATGCTTCTTCTAACTATAAAAAATCACTGGTCATCAAA
GATGTGCGTTCAGTTCGCGAAACTTTTGCATCAGATACTTTAAAGAACCA
TATGGGTGTTTTAATTAGTGTGCGTGCGACCACGGGTACAACGAGGAATA
AGCGAGTGATTGGACGACTTTACCTTGGTAAAACGAACTTTCCTTTTAAT
GATGAGGAATTTCACTGGGTTGAAATGCCTTCTATGGTACTTGGTCAATT
ACTGATTTCTCTACTTTACGATTGCGTGACTGACAAAATCTTTGTCACTG
TGCGACAATTTCATCAATTATCTGTTTCCAAAGATGATCTAGGAACTCCT
GGCATCATTTTAATAGTTGTGATTTCGTTCGTTTTGATCCTGCTCATTTG
TGCTGCTCTTTATCTCCTCAAAAACAAAAAACCAAAGAACGTCCGACAGT
CGATTTTTGATCACGAAAAACAAATCAAGTACGGTATACTAGACTATCCG
CAGTCTGGAACTCCAGAATTTCATCCAAACCCGATCCAGCCTCCTTATCA
AACGAAAGTGAAAGTGAAATTAATACCTAATAATGCGAAAACAAAGACGT
CTATAAAATACACAGAACTCGGCGAAGGTGTTGAAGAAGCTCAGGAGGAC
CATAAAATTTTGGATGACCTCTCCAGTGGAGAGCACTCACCCAATCAAAA
AGATTTCCGCAGGTCTGTACATCTTTATAAAGATAAAATCACAAACTTTA
TTTCCAAATATCGTGATGATCATGATTTATCGTCTTTACCACAAAATGAT
ACGGAACGCAGGATCTGGCAACCGGAACCAGTTGCGGTCAATCAAACACA
CCGTTTACAAAGACCAGATAGTGTTCTTTCCAATGAACAAGAAATGAGTT
TAGGACGATTAACTTTTACCATGTATTATCTACCTGGCGATGAATATTTA
ACTCTACTTTTGATATCTGGTCGACAATTGAACTCATGTGATTCCTTATA
TAACATTCGTTTGCCAGCTGTCAGTATCGTCATCGAAAATAATCCCAACA
CCGAAGTCACTTCAAACCCGGATGAAGCACCTAATCCGGAATATGACCAA
GAATTCACTTTCACTATCCGCTCAAAAGAACTCTTCGATGTGGTATTACG
ATTTACTGTTTGGGATATTATATCGAATAACGAAACCAGAGTGCTTGGCT
TTTTTCGTGTACCTTTAGCACAATACCAAAAGACTCTATTAGCTGGTTCT
GATACAGGACCGATTTGTCGTGAAATACAACCCTGTCTCAATCCTATGAG
TTTTCACAATGCCATCTCAGAAGTTCGATGCAACCTTAGCCCTGAAATTC
CGGACATGTATTTGAAAGTATCTCTTCTCTTGGATAATGACATAATCGTC
AGTAAACGTTCCAAAACCTTCACATCAACTCGTGATCTACATCTTACACA
AACATTCGAATTCAGTGCTCTCTCTGATGAACTCGATAAAATGTCGACGG
AGACAAGTCCTATATTAAAAGTAGCAGATGAGCTCATAACTAATGCTTCT
TCTAACTATAAAAAATCACTGGTCATCAAAGATGTGCGTTCAGTTCGCGA
AACTTTTGCATCAGATACTTTAAAGAACCATATGGGTGTTTTAATTAGTG
TGCGTGCGACCACGGGTACAACGAGGAATAAGCGAGTGATTGGACGACTT
TACCTTGGTAAAACGAACTTTCCTTTTAATGATGAGGAATTTCACTGGGT
TGAAATGCCTTCTATGGTACTTGGTCAATTACTGATTTCTCTACTTTACG
ATTGCGTGACTGACAAAATCTTTGTCACTGTGCGACAATTTCATCAATTA
TCTGTTTCCAAAGATGATCTAGGAACTCCTGGCATCATTTTAATAGTTGT
GATTTCGTTCGTTTTGATCCTGCTCATTTGTGCTGCTCTTTATCTCCTCA
AAAACAAAAAACCAAAGAACGTCCGACAGTCGATTTTTGATCACGAAAAA
CAAATCAAGTACGGTATACTAGACTATCCGCAGTCTGGAACTCCAGAATT
TCATCCAAACCCGATCCAGCCTCCTTATCAAACGAAAGTGAAAGTGAAAT
TAATACCTAATAATGCGAAAACAAAGACGTCTATAAAATACACAGAACTC
GGCGAAGGTGTTGAAGAAGCTCAGGAGGACCATAAAATTTTGGATGACCT
CTCCAGTGGAGAGCACTCACCCAATCAAAAAGATTTCCGCAGGTCTGTAC
ATCTTTATAAAGATAAAATCACAAACTTTATTTCCAAATATCGTGATGAT
CATGATTTATCGTCTTTACCACAAAATGATACGGAACGCAGGATCTGGCA
ACCGGAACCAGTTGCGGTCAATCAAACACACCGTTTACAAAGACCAGATA
GTGTTCTTTCCAATGAACAAGAAATGAGTTTAGGACGATTAACTTTTACC
ATGTATTATCTACCTGGCGATGAATATTTAACTCTACTTTTGATATCTGG
TCGACAATTGAACTCATGTGATTCCTTATATAACATTCGTTTGCCAGCTG
TCAGTATCGTCATCGAAAATAATCCCAACACCGAAGTCACTTCAAACCCG
GATGAAGCACCTAATCCGGAATATGACCAAGAATTCACTTTCACTATCCG
CTCAAAAGAACTCTTCGATGTGGTATTACGATTTACTGTTTGGGATATTA
TATCGAATAACGAAACCAGAGTGCTTGGCTTTTTTCGTGTACCTTTAGCA
CAATACCAAAAGACTCTATTAGCTGGTTCTGATACAGGACCGATTTGTCG
TGAAATACAACCCTGTCTCAATCCTATGAGTTTTCACAATGCCATCTCAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_034912	XLOC_034912	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00055489-protein	TCONS_00055489-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_253	supercontig	scaffold_253:360524..366692 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.353416	0.358655	0.366979	0.456974	0.119292	0	0	0.732569	0.004396	0.0488317	0	9.84061e-07	0.259107	0.773108	0	0.00103362	0	0	2.31245	0	0.0220842	9.02157e-06	0.0278841	0.826658	0	0.729249	1.42231	0.417138	0	0

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000008	C2_dom

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00055489 vs. Swiss-Prot (Human)

BLAST of TCONS_00055489 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00055489 (transcript) - C. hemisphaerica