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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055567 ID=TCONS_00055567|Name=TCONS_00055567|organism=Clytia hemisphaerica|type=transcript|length=188bp
AAAGACTTCGCTATAAACCTGAAAAATGAAGGTGTTTTTGATTATGGTAT
TTTCTTGCTATTTAGTGCTGCAAACTAAAGGATTGCCTAAACAGAAGACT
GGGAGCGCGAAGTTGTACTCCAATACTATGCAACCGTGTAAAGCAACCTT
GCTACAGTATGGattaatattttttgataacGCGAACC Run BLAST on NCBI transcript from alignment at scaffold_253:1144394..1145424- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055567 ID=TCONS_00055567|Name=TCONS_00055567|organism=Clytia hemisphaerica|type=transcript|length=1031bp|location=Sequence derived from alignment at scaffold_253:1144394..1145424- (Clytia hemisphaerica)
AAAGACTTCGCTATAAACCTGAAAAATGAAGGTGTTTTTGATTATGGTAT
TTTCTTGCTATTTAGTGCTGCAAACTAAAGGTGAAGAATAATCTGTCTCT
ATAGTTTTTTCTTAAATCTAGTACTAGTCAAGGGACTCTTTCCCAGGCCT
TGCAACTGTGGTTGGTCGCTAAGGCGCTAAAAATTTCATTTTTGAATCTC
TACACTCCCTTCTCACAGACCCGGTAGAATTTTTTTAGCCAGTTGTGGTA
AAAATAACGGACTGAAACTCGATGGGTTCCCTTATTTTTTATGACTGGGG
ATTTAAATTCTTTCGTTTTCAAGTCAGAAAATTCAGTTGGGATGGGGAAA
ATAGCATAATATCTTGCAGCGAGGATTGGTTTATTTGATTATTTTCAGTG
GGGACGAAAATTGGAGTATAATTTTTCACCGGAGGTGATATTTTGGCCAA
TTTTTCAGTGGGAATGGTTCCCAGTGGGTCTGTGAGAAAGGGGTGTATCT
CTGGATGTCTTTGACAATCACTAACTACTTTTAAATAGAAAATATGTTAA
AGAAAAATTTTCATCCTTTAACAATTATTATAGGATTGCCTAAACAGAAG
ACTGGGAGCGCGAAGTTGTACTCCAATACTATGCAACCGTGTAAAGCAAC
CTTGCTACAGTGTAAGTTGATTGTTTTACAACATTTCAATCTTGATTTAA
TAGTCGTGGGTGCAACCTTGTTTTCCAAAAACGAGGCAAAGATTATACAC
ATTCTCTATAAATTCTCACGTCTGTTTCCTATCTTAACTCGTCTTGTATA
TATAGTTTAGAAATCAGTTTGGTGGAACAATGTTTAGTAGGATTCTTGTA
TTTCTTTGAAGTCCAATGGATACCTGGGAAGACCATATGTTTAGAAAAAT
GAATATTTTCATTCACAATTTCTGCTTTGAATATTTGGGGCCCCCCTATT
TGCTGTAAACGGAACAAAAACTCCTCCTTGAAACGCTGTTTTTCTTCCCA
GATGGATTAATATTTTTTGATAACGCGAACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055567-exon-scaffold_253-1575043694:1145345..1145424 | TCONS_00055567-exon-scaffold_253-1575043694:1145345..1145424 | Clytia hemisphaerica | exon |
| TCONS_00055567-exon-scaffold_253-1575043694:1144764..1144841 | TCONS_00055567-exon-scaffold_253-1575043694:1144764..1144841 | Clytia hemisphaerica | exon |
| TCONS_00055567-exon-scaffold_253-1575043694:1144394..1144423 | TCONS_00055567-exon-scaffold_253-1575043694:1144394..1144423 | Clytia hemisphaerica | exon |
| TCONS_00055567-exon-scaffold_253-1510915933:1145345..1145424 | TCONS_00055567-exon-scaffold_253-1510915933:1145345..1145424 | Clytia hemisphaerica | exon |
| TCONS_00055567-exon-scaffold_253-1510915933:1144764..1144841 | TCONS_00055567-exon-scaffold_253-1510915933:1144764..1144841 | Clytia hemisphaerica | exon |
| TCONS_00055567-exon-scaffold_253-1510915933:1144394..1144423 | TCONS_00055567-exon-scaffold_253-1510915933:1144394..1144423 | Clytia hemisphaerica | exon |
| TCONS_00055567-exon-scaffold_253-1491911889:1145345..1145424 | TCONS_00055567-exon-scaffold_253-1491911889:1145345..1145424 | Clytia hemisphaerica | exon |
| TCONS_00055567-exon-scaffold_253-1491911889:1144764..1144841 | TCONS_00055567-exon-scaffold_253-1491911889:1144764..1144841 | Clytia hemisphaerica | exon |
| TCONS_00055567-exon-scaffold_253-1491911889:1144394..1144423 | TCONS_00055567-exon-scaffold_253-1491911889:1144394..1144423 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_253 | supercontig | scaffold_253:1144394..1145424 - |
Blast
The following BLAST results are available for this feature:
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