TCONS_00055617 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055617
Unique NameTCONS_00055617
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4480

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055617 ID=TCONS_00055617|Name=TCONS_00055617|organism=Clytia hemisphaerica|type=transcript|length=4480bp
CAGTTATTGATTGAGTTATACTCTAGACAATTTTATGTGTGGTTGAAACA
ATTATGAGGCTAATATCACTTCTCAATTACTTTAATATTATTAATCTTTT
TTCAGTTAACTAAAAACGTATCATTCAACTTGCTCGGTTCATCATGGAGG
CACTTGAGTGGTCGGAATGCAGTGAAACACTTGATGATCTATTGAAAAAT
CCTCGAGTACAACTTCCTCAACTTTTGAAACTCTCTTCTTCTTTCAAAGA
CATTAACTCGAATGAAAGTCTACAGAAAGACCAGATAATTGTTATTCACT
CTAAAGAAACCATTGAGACTATTCACGGTGTTGATGCAGATGGAAAAACG
ATTATAATCCCAATTGATTGTCCATTCAAAACTAGACGAAAAGTTTCACC
AGGAAAAGAGAAAGTTTTCGATTCAGTGACAGAGCTTGCTCAAAGTGACC
CTCTACCTCGCTTTGTAGAAGTAAAAGAGTCCCATGATGTTCAAAATCTA
TCGAATGGAGATCGATTAAAAGTGGTTATCGTTGAAAAAGCTGCTGGTGC
CCCGTCAGTTTTACATTGTCGTAGTTCTAGTGGAAAACATGTCAAAATTT
CTGTCAATGAGAacatttcttttcaatcttCAGTGAGTGATGGTTCTGAT
CAAAGTATTGCGAAACTCTCAGAAAAATCAAGGGAGTTCCCATTTTGTGT
TGAGTTTCTGAAACAGAAAGAAACCCCAGACATTCACACAAAGCTTGGAA
TTTTCACCATTCAAGAATGTAAATCAGAAACCGTAGTTATTGCATCAGCA
ACTGTTAACTCAAAGGAAATAGCCATAGTATTTCCACTTCATTCAGAGTT
TAGCTTTCAAGTCACTTCAAAACTTAAAATGGCAAAGGATGAAGGTTATC
GTGAACTTTGTAATAATTCTTCATCTATCGACCCTGAAAAAATTGTTGAA
TTCATAAATCACAAAAGCCCAAAAGACACTCAAATGCAATATGTTTTGCC
ACtcaaaaagcttcaaaaaatcttaaattttgacTACTCTCCAGATACAG
ATCAATCTTCACCAAAGGAAAAACAAAAGTCCAACGAAAAACCCAAGTCA
Gcaagaaaggagaaaaaagaatctccaaaaattgaaaaggaaaacaaatc
cAGAAAGTACAAACCAACTAAACAGCTTCCATCATTGACACAAAATGATT
CTGCTGTTGAACTAGAAGAATCTGAAAATGAAATCGAAGAAGAACCATTA
CCACCAAATACTTTGGTTGCTGATGCTGAACAAAAGGAAATTCTTAAACG
TGAGATTAAAGAACGGGAGCGTCAGATCAAATTAGAAAAAGAACAAATGA
AAGCAGAGAAAAAGCGagagaaaaagctgaaaaaggaACGGGAGAAAgag
gagaaaaagaagaaaaaactatCCACATCTTCTTTATCAAGCACAACATC
AGCTCCTGGTTCTCCTGTTGACATTGCAGTCGAGAGTGAGGATATTTATA
TCGTCCCCCAGGACGAAGTTGATGCTGCCAGTCCAGAAAGCCCAAGAACA
GAAGAGGAACAGCAATCTCAATTTGCAATGTACCTAATGGGCAAGGTTAA
GAAAGTTCGGGACCGCACCACCTCGATGGGTTTCAgacctaaaaacaaaa
aacgaggAAAACTGCGCAAAGAGGATATTGAATACATATCTGGAGAGCAT
CTGGGACCAATCATTCCACAGGATGAATCATATTATTCCGGTCTAGGCAA
CGATGAAGCCTTTTCTGACAGCTTGTATGAAGCACTTCCAGGAGAAATGG
CCTACGAATCACTTGACCTTGTTGCCCAAGCTCAAAGATCACTTACCTTA
CCTGTACAAACAGAAAACAGTGGGGATAGTGGTTTTGATGAAATCGACCA
GGCAAGAATCAAGGCTTGGAGAGATTCTATGGCTCCACCACCTTTGCCAG
GGAATCACCCATTGCAAAATCATTCTGCTCAAGAAGAGGAAAACCTTTAC
GAAACTGCTGTGGATTGCAAGAAAGCAGTTCAACAAGGACAAAGTATGGC
AGCTTGGCAAAACTTTTATGACAGTGTTCATCAGAGTACAAATGAAATTG
CAACATGGGATATGGAAGATGTTGCAAGCTGTCTTTCCGATTTACTTTTG
ACAAATTATATTGAGGTATTTTCCGATTCACAAGTTGATGGCCAATTACT
TCTTGATCTTGATGAAAGTGTTTTGAAAGATCTTGGCTTAAGCCCCTTTG
AAGCTAGAAAGTTACGTAAATTTGTGTTTGGTTGGAGACCTGATACGATT
CGACCACCAACCTACCCTCAACGATTGGGATTCGATAGTAAGGATCCAAC
ACAATGGAATGAAGGTGATGTTGTTAAACACCTACAAACTATTGATTTGA
atgattttgctaatttttgccAAAGTAACCAAGTAAATGGTGAACTATTG
AAAGATCTTTGTGTTGACGATGTACTAATGGGAACAATAATTACAACCAA
AGATAAAAAACTAAAAGCAGTGAAAATTAAGAATTATGTTATTGACCAAT
GGCGACCGAAAAAGAAAGGAGAGGGAAATTACATGAGCAGTCAAAGCATT
CTACCTCCTGAAAAGCGATCTTTGAGCACTGCAAATATTAACAAAGTTGG
AAACAGTTCTCCTAAAGTTACAATTGCAAGCCAAGTTTCGGCAAGTACAA
CAAGTATAAATAAAGTATCTTCTGGAGCATCCCCAAAGGCAAGAAATTCA
CcaccaagtaaaaaaattacgaCCGGGGGAGATGCTCCACTGATAGCCCG
TATGAAACAACAGCTGGAAGataataaaaacaattggaaagaaaagaaat
gaaTGTATTGAGTATTATGCTAacatttttgttggaatatAATATTTGTT
GATCATTTTTATTAGATTattttgggtcaaatttttAGATCTAAGTTTTG
ATTTGAAGATTTTACTCCTTGCtctttttgtataatttatgaATCACGAG
GCTTCTTTTCGATCATTTCGTGTTTCTTATTGAATCAACCAATACACCAT
TTGCAGTTGCTATAGAGTTGAATGAGATTTTGTATTTCGTTTACTTTCGA
TCAGTCAGATATTCGAATACCTCTTTCAAAACACTTAATCTGAAGTATGA
ATcatctttttcattcaaatatttttataaaaagtaggGTTTTTctatat
tatctttttttttgcataatgTATTTAATGAGATTTTCTAACCCTAATCG
CTGCCCAGAAAAAAATTGCCACACTTTAGATTTCATTAGCTTAACTATAG
TATTGTTATCAGTAAACTAAAAGCAcgtattttgatgaaattgattttga
acACGCCGAAGTTTTTAATAGATTTTGTCAAGGTTCCTTATACAAAGACT
TAAATATTCTTTCATGGACAGCAATTACATTTGATTTCCTGCTTTGTATT
ATCGGATGCAAAAGAGATCGGACATTCTGCTGAGTTtctttttcctattg
aaatattttctttctcatcaaaatatcaGTAGGATAGTGCTCTCCATATT
GAACATATTGAGAAAGTATCGTTCACTTGTGAACGTTCTCTTTATATTCC
CTTTATCGCCTTTTTGTATAAGAaagattttgaacatttttaccAGAAAC
ATTGAAAGCTATTTTCACTAGTTTTTATAGGGAACACATTTTGCCTTTAG
ATATATACGAATCGTCTTTTTGGAACGAAATTTATAGTATAGTTTATACG
TAGTAATATTTCTAAACCAATTAATACTTATATTTCTTGCTTGAATCTTT
ATCACCCAAATGCTTTCCCATGAACCTACAATTaattgcctggaaacgca
agaTGCTGACGAATTCCGAGTGATTAACCTAAAtcgaaaaacaatatttt
ttataacttCCGAATGCCAAGAGAAAATATTCCCTCTCCTTCATTCATTT
TTGATATATTGAATAGTTCGGTAGGAAATCCTGGATCCCTGCtcaaaaag
atattaaaaaatTGCGAACATTTTGCTCATTAAATGAAAAGGCTGCAGGG
TTTTTTCCTGGATTTCAACAGTTACCTTCTGAAGGCTTTCGATAATTTTA
ATCGAGATTGGAAATGTCCCTTTTGAAACTAACAAAGATTCACTGAGTTC
CTGATATTTTTCACTCTCAGTAACTTAAGATCTATAGGGTATCTCACTCT
CAAATGAACGCTTAGTATGTAATGTTTTGACAAAGTTAGAGATTACGgac
attttttgtaaataatatTTGGTTAGATAATATTACTCTGTTTGATCTTT
ATAACGAAAAGTCAATAGAACGGTACTTTGCAAGGTTATTGCACATTCTT
TCTCTAAATCCTTCATTTACATTGCACAGCTATCTATTTTACTTATAAGC
ACAACTTATTTTAGGCGTACAATCTTTCGTAATcagaaagtttcgcgatt
tttgtgaaaacaaaTCTTcgtaaatttcga
Run BLAST on NCBI

protein sequence of TCONS_00055617-protein

>TCONS_00055617-protein ID=TCONS_00055617-protein|Name=TCONS_00055617-protein|organism=Clytia hemisphaerica|type=polypeptide|length=902bp
MEALEWSECSETLDDLLKNPRVQLPQLLKLSSSFKDINSNESLQKDQIIV
IHSKETIETIHGVDADGKTIIIPIDCPFKTRRKVSPGKEKVFDSVTELAQ
SDPLPRFVEVKESHDVQNLSNGDRLKVVIVEKAAGAPSVLHCRSSSGKHV
KISVNENISFQSSVSDGSDQSIAKLSEKSREFPFCVEFLKQKETPDIHTK
LGIFTIQECKSETVVIASATVNSKEIAIVFPLHSEFSFQVTSKLKMAKDE
GYRELCNNSSSIDPEKIVEFINHKSPKDTQMQYVLPLKKLQKILNFDYSP
DTDQSSPKEKQKSNEKPKSARKEKKESPKIEKENKSRKYKPTKQLPSLTQ
NDSAVELEESENEIEEEPLPPNTLVADAEQKEILKREIKERERQIKLEKE
QMKAEKKREKKLKKEREKEEKKKKKLSTSSLSSTTSAPGSPVDIAVESED
IYIVPQDEVDAASPESPRTEEEQQSQFAMYLMGKVKKVRDRTTSMGFRPK
NKKRGKLRKEDIEYISGEHLGPIIPQDESYYSGLGNDEAFSDSLYEALPG
EMAYESLDLVAQAQRSLTLPVQTENSGDSGFDEIDQARIKAWRDSMAPPP
LPGNHPLQNHSAQEEENLYETAVDCKKAVQQGQSMAAWQNFYDSVHQSTN
EIATWDMEDVASCLSDLLLTNYIEVFSDSQVDGQLLLDLDESVLKDLGLS
PFEARKLRKFVFGWRPDTIRPPTYPQRLGFDSKDPTQWNEGDVVKHLQTI
DLNDFANFCQSNQVNGELLKDLCVDDVLMGTIITTKDKKLKAVKIKNYVI
DQWRPKKKGEGNYMSSQSILPPEKRSLSTANINKVGNSSPKVTIASQVSA
STTSINKVSSGASPKARNSPPSKKITTGGDAPLIARMKQQLEDNKNNWKE
KK
Run BLAST on NCBI

transcript from alignment at scaffold_253:566072..570551

Legend: exonthree_prime_UTRCDSfive_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055617 ID=TCONS_00055617|Name=TCONS_00055617|organism=Clytia hemisphaerica|type=transcript|length=4480bp|location=Sequence derived from alignment at scaffold_253:566072..570551 (Clytia hemisphaerica)
tcgaaatttacgAAGAtttgttttcacaaaaatcgcgaaactttctgATT ACGAAAGATTGTACGCCTAAAATAAGTTGTGCTTATAAGTAAAATAGATA GCTGTGCAATGTAAATGAAGGATTTAGAGAAAGAATGTGCAATAACCTTG CAAAGTACCGTTCTATTGACTTTTCGTTATAAAGATCAAACAGAGTAATA TTATCTAACCAAatattatttacaaaaaatgtcCGTAATCTCTAACTTTG TCAAAACATTACATACTAAGCGTTCATTTGAGAGTGAGATACCCTATAGA TCTTAAGTTACTGAGAGTGAAAAATATCAGGAACTCAGTGAATCTTTGTT AGTTTCAAAAGGGACATTTCCAATCTCGATTAAAATTATCGAAAGCCTTC AGAAGGTAACTGTTGAAATCCAGGAAAAAACCCTGCAGCCTTTTCATTTA ATGAGCAAAATGTTCGCAattttttaatatctttttgaGCAGGGATCCAG GATTTCCTACCGAACTATTCAATATATCAAAAATGAATGAAGGAGAGGGA ATATTTTCTCTTGGCATTCGGaagttataaaaaatattgtttttcgaTTT AGGTTAATCACTCGGAATTCGTCAGCAtcttgcgtttccaggcaattAAT TGTAGGTTCATGGGAAAGCATTTGGGTGATAAAGATTCAAGCAAGAAATA TAAGTATTAATTGGTTTAGAAATATTACTACGTATAAACTATACTATAAA TTTCGTTCCAAAAAGACGATTCGTATATATCTAAAGGCAAAATGTGTTCC CTATAAAAACTAGTGAAAATAGCTTTCAATGTTTCTggtaaaaatgttca aaatcttTCTTATACAAAAAGGCGATAAAGGGAATATAAAGAGAACGTTC ACAAGTGAACGATACTTTCTCAATATGTTCAATATGGAGAGCACTATCCT ACtgatattttgatgagaaagaaaatatttcaataggaaaaagaAACTCA GCAGAATGTCCGATCTCTTTTGCATCCGATAATACAAAGCAGGAAATCAA ATGTAATTGCTGTCCATGAAAGAATATTTAAGTCTTTGTATAAGGAACCT TGACAAAATCTATTAAAAACTTCGGCGTgttcaaaatcaatttcatcaaa atacgTGCTTTTAGTTTACTGATAACAATACTATAGTTAAGCTAATGAAA TCTAAAGTGTGGCAATTTTTTTCTGGGCAGCGATTAGGGTTAGAAAATCT CATTAAATAcattatgcaaaaaaaaagataatatagAAAAACcctacttt ttataaaaatatttgaatgaaaaagatgATTCATACTTCAGATTAAGTGT TTTGAAAGAGGTATTCGAATATCTGACTGATCGAAAGTAAACGAAATACA AAATCTCATTCAACTCTATAGCAACTGCAAATGGTGTATTGGTTGATTCA ATAAGAAACACGAAATGATCGAAAAGAAGCCTCGTGATtcataaattata caaaaagaGCAAGGAGTAAAATCTTCAAATCAAAACTTAGATCTaaaaat ttgacccaaaatAATCTAATAAAAATGATCAACAAATATTatattccaac aaaaatgtTAGCATAATACTCAATACAttcatttcttttctttccaattg tttttattatCTTCCAGCTGTTGTTTCATACGGGCTATCAGTGGAGCATC TCCCCCGGtcgtaatttttttacttggtgGTGAATTTCTTGCCTTTGGGG ATGCTCCAGAAGATACTTTATTTATACTTGTTGTACTTGCCGAAACTTGG CTTGCAATTGTAACTTTAGGAGAACTGTTTCCAACTTTGTTAATATTTGC AGTGCTCAAAGATCGCTTTTCAGGAGGTAGAATGCTTTGACTGCTCATGT AATTTCCCTCTCCTTTCTTTTTCGGTCGCCATTGGTCAATAACATAATTC TTAATTTTCACTGCTTTTAGTTTTTTATCTTTGGTTGTAATTATTGTTCC CATTAGTACATCGTCAACACAAAGATCTTTCAATAGTTCACCATTTACTT GGTTACTTTggcaaaaattagcaaaatcatTCAAATCAATAGTTTGTAGG TGTTTAACAACATCACCTTCATTCCATTGTGTTGGATCCTTACTATCGAA TCCCAATCGTTGAGGGTAGGTTGGTGGTCGAATCGTATCAGGTCTCCAAC CAAACACAAATTTACGTAACTTTCTAGCTTCAAAGGGGCTTAAGCCAAGA TCTTTCAAAACACTTTCATCAAGATCAAGAAGTAATTGGCCATCAACTTG TGAATCGGAAAATACCTCAATATAATTTGTCAAAAGTAAATCGGAAAGAC AGCTTGCAACATCTTCCATATCCCATGTTGCAATTTCATTTGTACTCTGA TGAACACTGTCATAAAAGTTTTGCCAAGCTGCCATACTTTGTCCTTGTTG AACTGCTTTCTTGCAATCCACAGCAGTTTCGTAAAGGTTTTCCTCTTCTT GAGCAGAATGATTTTGCAATGGGTGATTCCCTGGCAAAGGTGGTGGAGCC ATAGAATCTCTCCAAGCCTTGATTCTTGCCTGGTCGATTTCATCAAAACC ACTATCCCCACTGTTTTCTGTTTGTACAGGTAAGGTAAGTGATCTTTGAG CTTGGGCAACAAGGTCAAGTGATTCGTAGGCCATTTCTCCTGGAAGTGCT TCATACAAGCTGTCAGAAAAGGCTTCATCGTTGCCTAGACCGGAATAATA TGATTCATCCTGTGGAATGATTGGTCCCAGATGCTCTCCAGATATGTATT CAATATCCTCTTTGCGCAGTTTTcctcgttttttgtttttaggtcTGAAA CCCATCGAGGTGGTGCGGTCCCGAACTTTCTTAACCTTGCCCATTAGGTA CATTGCAAATTGAGATTGCTGTTCCTCTTCTGTTCTTGGGCTTTCTGGAC TGGCAGCATCAACTTCGTCCTGGGGGACGATATAAATATCCTCACTCTCG ACTGCAATGTCAACAGGAGAACCAGGAGCTGATGTTGTGCTTGATAAAGA AGATGTGGatagttttttcttctttttctcctcTTTCTCCCGTtcctttt tcagctttttctctCGCTTTTTCTCTGCTTTCATTTGTTCTTTTTCTAAT TTGATCTGACGCTCCCGTTCTTTAATCTCACGTTTAAGAATTTCCTTTTG TTCAGCATCAGCAACCAAAGTATTTGGTGGTAATGGTTCTTCTTCGATTT CATTTTCAGATTCTTCTAGTTCAACAGCAGAATCATTTTGTGTCAATGAT GGAAGCTGTTTAGTTGGTTTGTACTTTCTggatttgttttccttttcaat ttttggagattcttttttctcctttcttgCTGACTTGGGTTTTTCGTTGG ACTTTTGTTTTTCCTTTGGTGAAGATTGATCTGTATCTGGAGAGTAgtca aaatttaagattttttgaagctttttgaGTGGCAAAACATATTGCATTTG AGTGTCTTTTGGGCTTTTGTGATTTATGAATTCAACAATTTTTTCAGGGT CGATAGATGAAGAATTATTACAAAGTTCACGATAACCTTCATCCTTTGCC ATTTTAAGTTTTGAAGTGACTTGAAAGCTAAACTCTGAATGAAGTGGAAA TACTATGGCTATTTCCTTTGAGTTAACAGTTGCTGATGCAATAACTACGG TTTCTGATTTACATTCTTGAATGGTGAAAATTCCAAGCTTTGTGTGAATG TCTGGGGTTTCTTTCTGTTTCAGAAACTCAACACAAAATGGGAACTCCCT TGATTTTTCTGAGAGTTTCGCAATACTTTGATCAGAACCATCACTCACTG aagattgaaaagaaatgtTCTCATTGACAGAAATTTTGACATGTTTTCCA CTAGAACTACGACAATGTAAAACTGACGGGGCACCAGCAGCTTTTTCAAC GATAACCACTTTTAATCGATCTCCATTCGATAGATTTTGAACATCATGGG ACTCTTTTACTTCTACAAAGCGAGGTAGAGGGTCACTTTGAGCAAGCTCT GTCACTGAATCGAAAACTTTCTCTTTTCCTGGTGAAACTTTTCGTCTAGT TTTGAATGGACAATCAATTGGGATTATAATCGTTTTTCCATCTGCATCAA CACCGTGAATAGTCTCAATGGTTTCTTTAGAGTGAATAACAATTATCTGG TCTTTCTGTAGACTTTCATTCGAGTTAATGTCTTTGAAAGAAGAAGAGAG TTTCAAAAGTTGAGGAAGTTGTACTCGAGGATTTTTCAATAGATCATCAA GTGTTTCACTGCATTCCGACCACTCAAGTGCCTCCATGATGAACCGAGCA AGTTGAATGATACGTTTTTAGTTAACTGAAAAAAGATTAATAATATTAAA GTAATTGAGAAGTGATATTAGCCTCATAATTGTTTCAACCACACATAAAA TTGTCTAGAGTATAACTCAATCAATAACTG

Coding sequence (CDS) from alignment at scaffold_253:566072..570551

>TCONS_00055617 ID=TCONS_00055617|Name=TCONS_00055617|organism=Clytia hemisphaerica|type=CDS|length=2709bp|location=Sequence derived from alignment at scaffold_253:566072..570551 (Clytia hemisphaerica)
tcatttcttttctttccaattgtttttattatCTTCCAGCTGTTGTTTCA
TACGGGCTATCAGTGGAGCATCTCCCCCGGtcgtaatttttttacttggt
gGTGAATTTCTTGCCTTTGGGGATGCTCCAGAAGATACTTTATTTATACT
TGTTGTACTTGCCGAAACTTGGCTTGCAATTGTAACTTTAGGAGAACTGT
TTCCAACTTTGTTAATATTTGCAGTGCTCAAAGATCGCTTTTCAGGAGGT
AGAATGCTTTGACTGCTCATGTAATTTCCCTCTCCTTTCTTTTTCGGTCG
CCATTGGTCAATAACATAATTCTTAATTTTCACTGCTTTTAGTTTTTTAT
CTTTGGTTGTAATTATTGTTCCCATTAGTACATCGTCAACACAAAGATCT
TTCAATAGTTCACCATTTACTTGGTTACTTTggcaaaaattagcaaaatc
atTCAAATCAATAGTTTGTAGGTGTTTAACAACATCACCTTCATTCCATT
GTGTTGGATCCTTACTATCGAATCCCAATCGTTGAGGGTAGGTTGGTGGT
CGAATCGTATCAGGTCTCCAACCAAACACAAATTTACGTAACTTTCTAGC
TTCAAAGGGGCTTAAGCCAAGATCTTTCAAAACACTTTCATCAAGATCAA
GAAGTAATTGGCCATCAACTTGTGAATCGGAAAATACCTCAATATAATTT
GTCAAAAGTAAATCGGAAAGACAGCTTGCAACATCTTCCATATCCCATGT
TGCAATTTCATTTGTACTCTGATGAACACTGTCATAAAAGTTTTGCCAAG
CTGCCATACTTTGTCCTTGTTGAACTGCTTTCTTGCAATCCACAGCAGTT
TCGTAAAGGTTTTCCTCTTCTTGAGCAGAATGATTTTGCAATGGGTGATT
CCCTGGCAAAGGTGGTGGAGCCATAGAATCTCTCCAAGCCTTGATTCTTG
CCTGGTCGATTTCATCAAAACCACTATCCCCACTGTTTTCTGTTTGTACA
GGTAAGGTAAGTGATCTTTGAGCTTGGGCAACAAGGTCAAGTGATTCGTA
GGCCATTTCTCCTGGAAGTGCTTCATACAAGCTGTCAGAAAAGGCTTCAT
CGTTGCCTAGACCGGAATAATATGATTCATCCTGTGGAATGATTGGTCCC
AGATGCTCTCCAGATATGTATTCAATATCCTCTTTGCGCAGTTTTcctcg
ttttttgtttttaggtcTGAAACCCATCGAGGTGGTGCGGTCCCGAACTT
TCTTAACCTTGCCCATTAGGTACATTGCAAATTGAGATTGCTGTTCCTCT
TCTGTTCTTGGGCTTTCTGGACTGGCAGCATCAACTTCGTCCTGGGGGAC
GATATAAATATCCTCACTCTCGACTGCAATGTCAACAGGAGAACCAGGAG
CTGATGTTGTGCTTGATAAAGAAGATGTGGatagttttttcttctttttc
tcctcTTTCTCCCGTtcctttttcagctttttctctCGCTTTTTCTCTGC
TTTCATTTGTTCTTTTTCTAATTTGATCTGACGCTCCCGTTCTTTAATCT
CACGTTTAAGAATTTCCTTTTGTTCAGCATCAGCAACCAAAGTATTTGGT
GGTAATGGTTCTTCTTCGATTTCATTTTCAGATTCTTCTAGTTCAACAGC
AGAATCATTTTGTGTCAATGATGGAAGCTGTTTAGTTGGTTTGTACTTTC
Tggatttgttttccttttcaatttttggagattcttttttctcctttctt
gCTGACTTGGGTTTTTCGTTGGACTTTTGTTTTTCCTTTGGTGAAGATTG
ATCTGTATCTGGAGAGTAgtcaaaatttaagattttttgaagctttttga
GTGGCAAAACATATTGCATTTGAGTGTCTTTTGGGCTTTTGTGATTTATG
AATTCAACAATTTTTTCAGGGTCGATAGATGAAGAATTATTACAAAGTTC
ACGATAACCTTCATCCTTTGCCATTTTAAGTTTTGAAGTGACTTGAAAGC
TAAACTCTGAATGAAGTGGAAATACTATGGCTATTTCCTTTGAGTTAACA
GTTGCTGATGCAATAACTACGGTTTCTGATTTACATTCTTGAATGGTGAA
AATTCCAAGCTTTGTGTGAATGTCTGGGGTTTCTTTCTGTTTCAGAAACT
CAACACAAAATGGGAACTCCCTTGATTTTTCTGAGAGTTTCGCAATACTT
TGATCAGAACCATCACTCACTGaagattgaaaagaaatgtTCTCATTGAC
AGAAATTTTGACATGTTTTCCACTAGAACTACGACAATGTAAAACTGACG
GGGCACCAGCAGCTTTTTCAACGATAACCACTTTTAATCGATCTCCATTC
GATAGATTTTGAACATCATGGGACTCTTTTACTTCTACAAAGCGAGGTAG
AGGGTCACTTTGAGCAAGCTCTGTCACTGAATCGAAAACTTTCTCTTTTC
CTGGTGAAACTTTTCGTCTAGTTTTGAATGGACAATCAATTGGGATTATA
ATCGTTTTTCCATCTGCATCAACACCGTGAATAGTCTCAATGGTTTCTTT
AGAGTGAATAACAATTATCTGGTCTTTCTGTAGACTTTCATTCGAGTTAA
TGTCTTTGAAAGAAGAAGAGAGTTTCAAAAGTTGAGGAAGTTGTACTCGA
GGATTTTTCAATAGATCATCAAGTGTTTCACTGCATTCCGACCACTCAAG
TGCCTCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034989XLOC_034989Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055617-proteinTCONS_00055617-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055617-exon-scaffold_253-1491911889:566072..570551TCONS_00055617-exon-scaffold_253-1491911889:566072..570551Clytia hemisphaericaexon
TCONS_00055617-exon-scaffold_253-1510915933:566072..570551TCONS_00055617-exon-scaffold_253-1510915933:566072..570551Clytia hemisphaericaexon
TCONS_00055617-exon-scaffold_253-1575043694:566072..570551TCONS_00055617-exon-scaffold_253-1575043694:566072..570551Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:566072..570551 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.13862 5.88892 1.69294 1.07658 54.1728 41.5069 37.1007 38.8224 15.4767 20.2282 12.4553 14.0462 13.408 11.6982 7.98082 8.38241 10.5884 12.7126 13.5985 15.3848 13.6694 14.702 12.8292 15.612 11.1303 14.0486 13.3606 11.1104 11.5155 13.1321
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001660SAM
IPR013761SAM/pointed
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055617 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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