TCONS_00055630 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055630
Unique NameTCONS_00055630
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length66

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055630 ID=TCONS_00055630|Name=TCONS_00055630|organism=Clytia hemisphaerica|type=transcript|length=66bp
ACATTTTTACATTGATTCATATTGGTGTATTCTAACAAAATTTACAGGTG
GTGAAAATATCAACTT
Run BLAST on NCBI

transcript from alignment at scaffold_253:927755..927820

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055630 ID=TCONS_00055630|Name=TCONS_00055630|organism=Clytia hemisphaerica|type=transcript|length=66bp|location=Sequence derived from alignment at scaffold_253:927755..927820 (Clytia hemisphaerica)
AAGTTGATATTTTCACCACCTGTAAATTTTGTTAGAATACACCAATATGA ATCAATGTAAAAATGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035002XLOC_035002Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055630-exon-scaffold_253-1491911889:927755..927820TCONS_00055630-exon-scaffold_253-1491911889:927755..927820Clytia hemisphaericaexon
TCONS_00055630-exon-scaffold_253-1510915933:927755..927820TCONS_00055630-exon-scaffold_253-1510915933:927755..927820Clytia hemisphaericaexon
TCONS_00055630-exon-scaffold_253-1575043694:927755..927820TCONS_00055630-exon-scaffold_253-1575043694:927755..927820Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:927755..927820 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055630 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
ACATTTTTACATTGATTCATATTGGTGTATTCTAACAAAATTTACAGGTGGTGAAAATATCAACTT5101520253035404550556065Sequence
Match NameE-valueIdentityDescription
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