TCONS_00055721 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055721
Unique NameTCONS_00055721
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length108

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055721 ID=TCONS_00055721|Name=TCONS_00055721|organism=Clytia hemisphaerica|type=transcript|length=108bp
CACTTTTCTCTCCTAGCATTAACACTTTCTATGGTTTTCGATTTCTGAAC
TTTCGATTATCTAGTACTTTTATTTAAGGTTATTCTTTTAATTATCTATT
TAGTACaa
Run BLAST on NCBI

transcript from alignment at scaffold_257:168239..168346

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055721 ID=TCONS_00055721|Name=TCONS_00055721|organism=Clytia hemisphaerica|type=transcript|length=108bp|location=Sequence derived from alignment at scaffold_257:168239..168346 (Clytia hemisphaerica)
ttGTACTAAATAGATAATTAAAAGAATAACCTTAAATAAAAGTACTAGAT
AATCGAAAGTTCAGAAATCGAAAACCATAGAAAGTGTTAATGCTAGGAGA
GAAAAGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035071XLOC_035071Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055721-exon-scaffold_257-1491911889:168239..168346TCONS_00055721-exon-scaffold_257-1491911889:168239..168346Clytia hemisphaericaexon
TCONS_00055721-exon-scaffold_257-1510915933:168239..168346TCONS_00055721-exon-scaffold_257-1510915933:168239..168346Clytia hemisphaericaexon
TCONS_00055721-exon-scaffold_257-1575043694:168239..168346TCONS_00055721-exon-scaffold_257-1575043694:168239..168346Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_257supercontigscaffold_257:168239..168346 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055721 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top