TCONS_00055778 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055778
Unique NameTCONS_00055778
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2651

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055778 ID=TCONS_00055778|Name=TCONS_00055778|organism=Clytia hemisphaerica|type=transcript|length=2651bp
ATCTAAGGGAAGGAAACACATCTTTGAAGACtaaaaaaagagaaacacac
GAAACTataagaaatgaaatttttattggTATACATCTTACTGGGATACG
TTGCAGTATTCGTGAAGTCGCACAACGAATTCACACCTGAAGGGTGTTTA
TTGGTGCATAATGAACTGAGGGCTTTGCACAAAGACACCCTATCCGTAGA
ATACGATNGGGTGTTTATTGGTACATAATGAACTGAGGGCGTTGCACAAA
GACACCCTGTCCGTAGAATACGATGCGGAACTCGAAAAATCAGCGGAACA
ATCGGCAAATTTCGTGAAAGCTACGGGTGGCGGTGAAGACACACGACCGA
CGCGAGTGTTACCAAAGCGACGCCGACGTCATGTTGaagatattgataaa
aatgttcaCATTGAAAGTTGGGATGGCGATATCTACTACCCCGATACTTC
GTTTACACCGCAAGGGACTGGAGAGAGTATTCATAAAATGTGTTGTCGAA
CTGCACCTCATTGTCCGAGAGAATTTTTCCACGGTCTCCTGTTTCCACCA
TCAGCTGAGGGTGTCGTAAGAGATTTCTACAATGAGGAGATGAAAAGTTA
TGATTTTGCCAGTGGGAAGAAGAAAGCTCAATTTTACACTCAAATCAAAC
ATTTCACCAACATCGTGTGGAAGAAAACTTCCAAGATCGGATGTTTTCAG
ACCAAGATGGACAGCAATAATTGTGTTTACACCGTCATTCATTATAAAGA
GAAAGGAAGTGAGGGAACACCTGAAATCTTCAAAGAAAATGTGGGAGTCC
TGCTTGATTCAGAGGAGGACTCGGCGAACATTGTGTTGATCTTTCTGATC
GTCTTTTTCATCGTTCTATTCTTGGTGTTGGTAATCTTGTGTTATTGCTG
CAGGGACCGGCTCTCCGAAAAATATTacgaaatcaaaatcaaaactgaTA
CAATGAAGGCTGAGCAAGAATTGGAGACAGACTCCACGGCGTTCTGGTGG
TTaaagattttcaagaaaaaacgtCGAACAGTGAAACGACCGACACGTGC
TCGATCAACGAAAACTCATCAAAGTTTACGGGACCGAAACATTTCCATTG
AAGTTGTGCATACAGTGAAACCACAGCGAAGCATCAAACAACCTCACCGT
GCTCGTGGTCAAAGCAATGCTTTGAAGTACAAAGGGATCAGCCAGAAGGC
GACACACTACCAACCAGACGAAACTATATACGAAAACACCCAGAATATCC
TTCCGCCGCCGCCCTACACGCTCTACGCGCCCACACCTCAACATCAATAC
AGAAATGAGGTGGACGATGAAGATATTTACGATGCTCCAGAATCCACTGG
CTCCTCCCATCCTTCACGTCCTCAATCGGCCCACCAACAACACCCACAAA
TGAAACGTGAACCAAGTTTCTCAGGAAAACCGCCTCCACCACCCGTTCCA
ACGCCTCAACCTCGCCCAACACAGCCGATGGTTCCTCCTCAAACACGCCC
TTCTCAACCAATGATGCCGCCacaagccaagcaaccaaaCAAACCACAAG
TTACCAGTAGACCTACTAGTGCTGCATCCAGGCCAACAAAACCGATTGCG
CCACCGCCTTCCGCCCCAACTGCAGCTCCGCGCCCAATGGGCCGCCCAAA
TACGGCACCTAAGCCTACTGAATCTTTCAATGAGGGACAGGACTCACCAA
GTGTGAATGAACTTAGAAATAAATTTAATCAACAAAATGTTGCTAATAAA
CCTGCACCTGCAGTTAAAACGAAACCTATGATGCCTCCACCCGCTTACCG
CCCTAGGTAGAAGTTAGAGGTTTAGAAATTTGATAGATTGTTGGGAGATT
CGTGTCTTCGTATCAGGGTAAATTTGGTTGTTTATAATCTTTGGTGCTTC
ATGTCGCATCTTACTCGTCGAAACTGGAGTAGTTCGCATGAAGCGTTTta
agtatttattttttctaataatTATATCATTTTAATTTGCTGTTAATAtt
agttttatatttttttggagttttaacttgtttttgagcttttattaGCT
TTCTGCCTGTTTTATTGTCAGatttcttttcacttttttcaatgaATCTT
ATGTTCGTTgagaaaaacgaaaattttgtCACGTGCTTAATTTTAGCACT
CTCAGGTGCCTAGTAAATGAGAGTTGAACTTGTGAAAACTCTAAAATGTA
GTACATAAAAGGCCATTTAGATCACTATGGTGAATTATGTTTTGGCAGGC
CTTATATATTAATAAATGGAAGGTTCGGGGTTGGGAAAGTATTGAGACTC
TCTACGATATAGGCACCTAAGAGAACTTGTTGTTTGATTTTCTGCTTGTG
TTTTTGTCAGTGATTTCATTGACATTATTTTTGTACAgacttttcattct
ttcattGCTTTTAGTAGCGTCAAACGAAATCTTTCCTTTCGATAATAATC
AAGGATTttgttgggttttttttttctagaaactTGTTGGTTTATATTCT
GCATTTTTTTGTACATGCATACATCTTTTTTTGTTGCTTCTCAGATAATC
CATGTATATTTATTTAGATAAAGATAAACAACATACTTGTAGATAAGGAT
TTATTAGAAAGATATatgataattattttcaaacttgactttCGATACAA
T
Run BLAST on NCBI

transcript from alignment at scaffold_259:43662..51686+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055778 ID=TCONS_00055778|Name=TCONS_00055778|organism=Clytia hemisphaerica|type=transcript|length=8025bp|location=Sequence derived from alignment at scaffold_259:43662..51686+ (Clytia hemisphaerica)
ATCTAAGGGAAGGAAACACATCTTTGAAGACGtaagttttttttgtcaaa atccaGGTTACTAAATATCCCCCTTTCAAACCTAATGGAGTTTCTTGTTA TTGTTTAGTAAACTGGAGTCTcattaattttatatttttctcaatCCAAG ATGATCTCcttttataaaataaacaaaatgaatAAATGGTTTTGAAAGAG GTAATATCAAGTATTCCAAAGAGGTTTTTAGAGTGCAATgccaaaagaaa aaatattgtgCAAGTCTTTCTTGTGATATAAGCGAAACTTTTAGCCTAGT TGTGTTAAAGTAATTTACTGGAGGGCTCATGCATCGGTCAAGCATTCTTT GTTGTCTTCTTACTTTTTACCTCACTTTTCTTACGTTTAGCAATTTAGTT GAATCAGGTCATGGGAGTCTATTTCACTTGTGGGCTGAACAGTTCATCAT ATATTTAGTTTCTTTGCATAACTTTTAATCTGATGTTTTAGTTCAAATGT TAAATGATTTTCAATTGAGGAGTAACATCACACTGTCATATTTCTTTCCT TCTTTTCCATTACATGATCTaatgaaatatgatttttttgtagGAACTAA ACTATCATTCGATTTGACAGCCAACCAAGACGTGGTATTTCTTGTAGGAA CATCCATTTAAGAGTTTCTTACCCCCTTTTTATTGATTTATGTTGGAATA GAAACTTGGTGTAGGTTGATAATGTCATTTTTGCTTTCAATCCTTTTATA TAGACTtataattttcctttgtttgtaTTACGTTCAGATCAAAGATAATA GGaactttaatcattttttttgagaaatgaaCTTGATTTGAGGGAgtaaa attttgacaggttgtATAAGATATTTTTTTGCCTTTTCGGATAGCTTTGA ATTTTCACGCGGCAAATTGACCTCTCTTTTATAACTTGtaatctttttat atttttccttttcataCTGTGATAATAAGGAGTGATGCGAAGTCTGAATT CTAACAGTTTATCCACACGACAGagaaaaagagatttttgttAATATTGT CTTACTTATATTTCATATTGATATTATAAGATTCATATGAAAGATTATGT TTTGTACAGAGCTGTCTTGAAAACAAAGTGAAACGTATCTCCCTCTtgac ttgcaatttttttgttGCGACGGCTTTCCCGTTTTCCACTCTTTTCGCTG GTTTTCATTTCAATGTAATGAGATTAATTGCAATGAACACTTCACAATGA TTTTATCATTAGCAGCAGTGATcatcattttaatgaaaactacTTTCTAA TGATCACAATGATGTCATCTCAATGATGATGTCATTGTAATATCCTTTTT AatctatcattatatggaacaaaGTCACGAGTCATTTCTCACTCTCGTTT CGTCTTGTCAAGAACACTTAATGCTATCCTTCACAAAGTTTGATGGGTCT TTCTATTTTCATATGCCAAAATTTTTCTGTTTGTATTGAAAACATGAGCC ATCGATTGGAGTGTTTGTTTTTCATAGACGTGACAAAATCTATGACATCA TTATTCGAATCTCCATCTTAACGCGTAAGCCTTGTTTTCTTTAGACATGT ACTGAAAGCAAGAGACTCTTTAATGATAAAATACATTTTGTTGCCAAATT CGTTTTTACTTGCTTAACGTTTCAGTACTGATAGTCGACAAATTTTAGTG ATTCTCCTGTGAAACTTTTAAACTTTGTAGGCTTTGTGTAGGTTGTTTTG ATTATGTTTACAGTTATGTGGTCTGTTGGAAATTTAAGACGCGATTTTGG TTTCCGATTGTTGTTTCTATAAGGAATATTATTACgatatacacgttttc ttatcTACAATCAGTTTACTGTTAGTGAATGGACTGCAGGCTGATGCTTG ATCCCTATGACGTGAAAAGTCTTATTGGCGAGGGTAATTTCGAGTGGAAT ATGTTTTTGCAATCAATCNACCATATTACGTGAAAAGTCTTAATGGCGAG AGTAATTTCGAGTGGAATATGTTTTTGCAATCAATCAGTTTTGTGGGTTT TTTTTCAAGACACAAATTAGCTTTTACTGTAAAGGATGATCTCGTACTCT CTTGCAAAACGCCTTGTACATGTTGCTGCCTTCAGACTTGTTTATCacat ttttttcgtcaaaacaaAGCATTCATACCATTCAGTATTGCAAAGGAGAA TTGTTCAATGAAGGTGTTATATTGCACAAATTCAATACTCATTCAACAAA TCTAGTAGCCAATACTTATCATCGAATGGTTCAATGAGTGTTAAATCAAT CGTTGTTTTTCTCGTGATTTTCTTTACGTTGATCTTTTGGTGGTTGGGGT TTGTGACACGTTTGTTTTTGATAGGGTTTAGTTACTTTATCTTTTAAAAT GTTGCTGAAGTTTCCAAGACAGAAGACATTTCCCAAGAAAAGCATAATca acgtcattttttatgttattTCCTGTGATCTATATTCATCTGTCAGGcaa gatgtttttgaaaagTGTCGTGGATTAACAACCTTGCTTTTTATTTCTAC TTGTCAGGGGGAAGGATTTTCCACATGAGAAAATAAACGAGTCGTTAGAA AAAATAATCCTTTAGTATCTTAAGATATATAATATTAGTtgggtttttaa attatttGAGCATTGATACGTTGTAAGATTGAGATGTCGTTCAAAGATGT GGACGTGAATTTACAATAAAGCATATCGTTTCAATCTTGAGAATTTGAAT AATCTTGATTCAAATCTCCGATACTGACCTCCGGCTATTCGAAAGcttca tttaattttctaaATATACCGGAGAAAATGCTTTGTAGGACTGAATGAGT GTTTAAAATCACTTTGaacaatattcaaaacatttcAGTATAACCATACG TTTTGTTTTCCGTTTAACACACCGAGTGAAAGAgataaatattttcaagt ttcaCTTTCAACATGCATAGTCATATTTCCTTTAAAGGTTTTCAACTTTC GATCATCTATAATCAAGTTTATGATAATACATTTTAAGTTTCTTGTTCTT TGGTTAATACGTTCTTCTCGAGGAAAATTTTGATCTGCTCATACAGTACT ACAATCTTAAAGTTTATGTATATTATGTATATGCTATGAATTAAGTCAAG ATCTGATAACATTCCATAtatcttgttttcttgttttcagtaaaaaaaga gaaacacacGAAACTataagaaatgaaatttttattggTATACATCTTAC TGGGATACGTTGCAGTATTCGTGAAGTCGCACAACGAATTCACACCTGAA GGGTGTTTATTGGTGCATAATGAACTGAGGGCTTTGCACAAAGACACCCT ATCCGTAGAATACGATNGGGTGTTTATTGGTACATAATGAACTGAGGGCG TTGCACAAAGACACCCTGTCCGTAGAATACGATGCGGAACTCGAAAAATC AGCGGAACAATCGGCAAATTTCGTGAAAGCTACGGGTGGCGGTGAAGACA CGTAAGTAAAGCCAGTAGGAACAGATAGTGTGATCAAATTTTGACTTACT CTATTACAGTATTGTAGTTGACTCGTTTCAATATTATCGGTCACCCTTTT AAAGACTTTAAAGAGTAGAGTTAAACGATTAAGAATTTCACTTTGAAATC GTGAATATCTTTTGAACAGGTTTAAACCCTTCTCCTATTCttacatatat atatatatatggtgaagatcagagatctgacctcaaggtgagaaagtgtt gaaaatactaaataaaataaagatgaaacataaaaaggcgaaaggaagtt ttctgttagagtagtctgagtcaaaaagaagaaagaagtttattattttg ttttctctctctaaagatatttcatatatatttgttagctatttttgtcc aaaatccttggggatagccatttttaaaggttggggatgccaagaagagg gggtcatttaagaaggggtggatcagacccctttccgcactatgtcTTGA TTTTAAGATTAAACTTAGAGATTAAAACAGAGTAACTTTCTTTTTGCCGA CAGACGACCGACGCGAGTGTTACCAAAGCGACGCCGACGTCATGTTGaag atattgataaaaatgttcaCATTGAAAGTTGGGATGGCGATATCTACTAC CCCGATACTTCGTAAGTTAAGTTTTCCCATTGTCCATGTTTCGTATAATA TTCGATTAAAAAACAGTAAATATTTCCAAATAGTGCAACTTTTGCTTGAC AGGAATATAAAGCAATAAGATAAGACTTCAATATtctaaaaatatattat aagtagcaaattgaaatttgaacgaGGCGACACGCAACGATAATTATTCT ACAATTTTTCAGGTTTACACCGCAAGGGACTGGAGAGAGTATTCATAAAA TGTGTTGTCGAACTGCACCTCATTGTCCGAGAGAATTTTTCCACGGTCTC CTGTTTCCACCATCAGCTGAGGGTGTCGTAAGAGATTTCTACAATGAGGA GATGAAAAGTTATGATTTTGCCAGTGGGAAGAAGAAAGCTCAATTTTACA CTCAAATCAAACATTTCACCAACATCGTGTGGAAGAAAACTTCCAAGATC GGATGTTTTCAGACCAAGATGGACAGCAATAATTGTGTTTACACCGTCAT TCATTATAAAGAGAAAGGAAGTGAGGGAACACCTGAAATCTTCAAAGAAA ATGTGGGAGTCCTGCGTAAgtttcacttgtttttacttTACCTTACCTCA CTTATGGGAAAGATGCAGCTAGGTAAATGAGAATCAATCAGAACCTTAAG GAGGTCGTCAGGTTCGCAAGTTTTCTTCATACCCGCGATGTGATGTCCTT CAATGAATTTCCCTTAAAAGTGTATATGATTTTCATCTAATGGTTCAGTG GGTAAAACGATAATTGTGTTGAATAGACTTTTCTGTTTTCTCCATTCCAG TTGATTCAGAGGAGGACTCGGCGAACATTGTGTTGATCTTTCTGATCGTC TTTTTCATCGTTCTATTCTTGGTGTTGGTAATCTTGTGTTATTGCTGCAG GGACCGGCTCTCCGAAAAATATTacgaaatcaaaatcaaaactgaTACAA TGAAGGCTGAGTAAGTACATAAGAAAGATCAGTTTCTATGAGTTTATACC CCTGTGTCGCAGNAGCTGAGTAAGTACACAAGAAAGATCAGTTTCTATGA GTTTATACCCCTGTATCGCAGACCCGCTGGGAGTCCAGCCCCGCTGGAAA GATTTGCAAACAtttccccggtgggaaaataccttagaatttcagcccca ctttgaaattaacttttatttaattatttcatTCACCTtagaacaaagga atttctatcatcattgggatttcaatacaGGAatatttatccccactgag aaaaaaattccaccgaggttgtgagacaggggtatgaGTTTAGATGACAT GATAGATATAAGTAACTTTCTTCACATACATATAAACAATACTAAAAGGG TGTCTTTTCTTCCTGATTGACATATTTACAATGCATAATCTTGAGGacca agaatttttttcttttagtacGAGCTTTTAATTAGCCTTATTTTTCGACC TGCTAACACAGCATACTTTTCTTTGGACAGGCAAGAATTGGAGACAGACT CCACGGCGTTCTGGTGGTTaaagattttcaagaaaaaacgtCGAACAGTG AAACGACCGACACGTGCTCGATCAACGAAAACTCATCAAAGTTTACGGGA CCGAAACATTTCCATTGAAGTTGTGCATACAGTGAAACCACAGCGAAGCA TCAAACAACCTCACCGTGCTCGTGGTCAAAGTACGCTTCCCAAATTTTGT GTCTTCTATCAAGAACTAATTTCCATGATTGAAAGGAATAATCCCTAAAT TTTGTTTCGAATACTCAATTCTACACTAAAATTcccccaaaaaaacaaat tcattcctgatttcaaaaataatcgTTTTTCGCTTAGGAAAAATCaatgt tttatgattttttctTGCTCAATAAAATAAGTCTCCTTCCCTTTTTCCTA TAACAGCTTTCTGATAAATCATCTGTCAGAATGTTAATGTTCATTCCTCG CTTTTTTACAGGCAATGCTTTGAAGTACAAAGGGATCAGCCAGAAGGCGA CACACTACCAACCAGACGAAACTATATACGAAAACACCCAGAATATCCTT CCGCCGCCGCCCTACACGCTCTACGCGCCCACACCTCAACATCAATACAG AAATGAGGTGGACGATGAAGATATTTACGATGCTCCAGAATCCACTGGCT CCTCCCATCCTTCACGTCCTCAATCGGTATGTCGTTTCGTTTTGACATTT GCAACATTTGAGAGACAGAAATGTCTTTATTTTTAATGAGCTTtatttat aacgcttaaaaagaaACATAACCCAAAAATATCTCCTTGGATTTCTAATA CAAACGTCAAGGGAatatgttcaatgttactatttTAACATTGAACATAT TtcctttttatttcaatctgaNATCTCCTTGGATTTCTAATACAAACGTC AAGGGAatatgttcaatgttactatttTAACATTGAACATATTtcctttt tatttcaatctgaaaTCCAAGGAGATGATTATTTTTGGGTAATGTTTCCT TTTGTACTGGTACTACTATTTAGCGTTATTGCGTTCTATTAATCCTGTTg aaaatgagcttctgaaacAGAGGCcaatatttatttcattttctctCTTT AGGCCCACCAACAACACCCACAAATGAAACGTGAACCAAGTTTCTCAGGA AAACCGCCTCCACCACCCGTTCCAACGCCTCAACCTCGCCCAACACAGCC GATGGTTCCTCCTCAAACACGCCCTTCTCAACCAATGATGCCGCCacaag ccaagcaaccaaaCAAACCACAAGTTACCAGTAGACCTACTAGTGCTGCA TCCAGGCCAACAAAACCGATTGCGCCACCGCCTTCCGCCCCAACTGCAGC TCCGCGCCCAATGGGCCGCCCAAATACGGCACCTAAGCCTACTGAATCTT TCAATGAGGGACAGGACTCACCAAGTGTGAATGAACTTAGAAATAAATTT AATCAACAAAATGTTGCTAATAAACCTGCACCTGCAGTTAAAACGAAACC TATGATGCCTCCACCCGCTTACCGCCCTAGGTAGAAGTTAGAGGTTTAGA AATTTGATAGATTGTTGGGAGATTCGTGTCTTCGTATCAGGGTAAATTTG GTTGTTTATAATCTTTGGTGCTTCATGTCGCATCTTACTCGTCGAAACTG GAGTAGTTCGCATGAAGCGTTTtaagtatttattttttctaataatTATA TCATTTTAATTTGCTGTTAATAttagttttatatttttttggagttttaa cttgtttttgagcttttattaGCTTTCTGCCTGTTTTATTGTCAGatttc ttttcacttttttcaatgaATCTTATGTTCGTTgagaaaaacgaaaattt tgtCACGTGCTTAATTTTAGCACTCTCAGGTGCCTAGTAAATGAGAGTTG AACTTGTGAAAACTCTAAAATGTAGTACATAAAAGGCCATTTAGATCACT ATGGTGAATTATGTTTTGGCAGGCCTTATATATTAATAAATGGAAGGTTC GGGGTTGGGAAAGTATTGAGACTCTCTACGATATAGGCACCTAAGAGAAC TTGTTGTTTGATTTTCTGCTTGTGTTTTTGTCAGTGATTTCATTGACATT ATTTTTGTACAgacttttcattctttcattGCTTTTAGTAGCGTCAAACG AAATCTTTCCTTTCGATAATAATCAAGGATTttgttgggttttttttttc tagaaactTGTTGGTTTATATTCTGCATTTTTTTGTACATGCATACATCT TTTTTTGTTGCTTCTCAGATAATCCATGTATATTTATTTAGATAAAGATA AACAACATACTTGTAGATAAGGATTTATTAGAAAGATATatgataattat tttcaaacttgactttCGATACAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035118XLOC_035118Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055778-exon-scaffold_259-1491911889:43662..43692TCONS_00055778-exon-scaffold_259-1491911889:43662..43692Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1510915933:43662..43692TCONS_00055778-exon-scaffold_259-1510915933:43662..43692Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1575043694:43662..43692TCONS_00055778-exon-scaffold_259-1575043694:43662..43692Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1491911889:46852..47162TCONS_00055778-exon-scaffold_259-1491911889:46852..47162Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1510915933:46852..47162TCONS_00055778-exon-scaffold_259-1510915933:46852..47162Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1575043694:46852..47162TCONS_00055778-exon-scaffold_259-1575043694:46852..47162Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1491911889:47715..47822TCONS_00055778-exon-scaffold_259-1491911889:47715..47822Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1510915933:47715..47822TCONS_00055778-exon-scaffold_259-1510915933:47715..47822Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1575043694:47715..47822TCONS_00055778-exon-scaffold_259-1575043694:47715..47822Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1491911889:48024..48376TCONS_00055778-exon-scaffold_259-1491911889:48024..48376Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1510915933:48024..48376TCONS_00055778-exon-scaffold_259-1510915933:48024..48376Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1575043694:48024..48376TCONS_00055778-exon-scaffold_259-1575043694:48024..48376Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1491911889:48612..48771TCONS_00055778-exon-scaffold_259-1491911889:48612..48771Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1510915933:48612..48771TCONS_00055778-exon-scaffold_259-1510915933:48612..48771Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1575043694:48612..48771TCONS_00055778-exon-scaffold_259-1575043694:48612..48771Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1491911889:49292..49491TCONS_00055778-exon-scaffold_259-1491911889:49292..49491Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1510915933:49292..49491TCONS_00055778-exon-scaffold_259-1510915933:49292..49491Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1575043694:49292..49491TCONS_00055778-exon-scaffold_259-1575043694:49292..49491Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1491911889:49773..49987TCONS_00055778-exon-scaffold_259-1491911889:49773..49987Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1510915933:49773..49987TCONS_00055778-exon-scaffold_259-1510915933:49773..49987Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1575043694:49773..49987TCONS_00055778-exon-scaffold_259-1575043694:49773..49987Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1491911889:50414..51686TCONS_00055778-exon-scaffold_259-1491911889:50414..51686Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1510915933:50414..51686TCONS_00055778-exon-scaffold_259-1510915933:50414..51686Clytia hemisphaericaexon
TCONS_00055778-exon-scaffold_259-1575043694:50414..51686TCONS_00055778-exon-scaffold_259-1575043694:50414..51686Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_259supercontigscaffold_259:43662..51686 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (25.3082 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.17632 2.07561 0 0.342454 8.39101 5.65484 6.88055 1.79587 5.28702 10.3966 7.08066 2.80956 9.57919 7.38997 1.37103 2.16963 0.842418 2.6089 3.72348 3.68178 4.72006 2.12165 3.4659 3.77434 9.64084 5.42574 25.3082 21.706 22.5492 24.2263
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055778 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
200400600800100012001400160018002000220024002600Sequence
Match NameE-valueIdentityDescription
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