TCONS_00055779 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055779
Unique NameTCONS_00055779
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2991

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055779 ID=TCONS_00055779|Name=TCONS_00055779|organism=Clytia hemisphaerica|type=transcript|length=2991bp
TCCACAACCAGACACACAGGCAATCCATCACCATCCACAACTCTTCTCAA
TCTATAAGTCttaAGGATCATGGTGGAACAGGACATCACAATACATCAAG
GATGGCTGGAACTTTATTCAGATTCGTCGTCCGGCGCATGGGGCAAACTG
TCCGGTAAAAAGCAATGGAAGAGAAGGTTTATTGTGTTCAACCAGTCAGC
CAGTAATGAAGATGAATGCTATTTGTTGTCTTACGAAAAAGAAGAGGCGT
GGAGAGTTGCAATCCCCAAAAGGAAACTTTCCTTGTATCCACGCTATAAA
GTCTGCAAACTGAACGATTTTAAAGGACGAGAGAAAGTTCTAGAGGTGAA
CAATGAACAAGAGAAATGGTATTTTGCTTCTGATAAAATGAAACTGATCA
ATCTTTGGGCGTGCCAGATTCAAATGCAAACCAAATTGAGTCGATCGATA
TCAGGAAGGATCTTCAGCGTTGTTGGTGCTTCTGTGAAAGACATGCATAA
TATAGGTGCTGCTCAGCAAAGGTGTTTACTTCATTTCACCAAATGGGGTA
TCACATTAGCGCTTCAGCAGTCCAGAGCTATTTTGGCCATGTGGCCGATA
AAGACTATTCGAAATTACGAGGATTCGGGACATTCTGAGTTCACCATTGA
AGCTGGCAGGCGTGCACCGATGGGAGAAGGTGTatataaatttgaaacaa
aCGCTGGCCAAGATCGAGAAATGTTTAATGTTGTCGACGCATTTGTTGCA
GCGCTATTAGATGAGAAAGCGCGCATTGCTGGTGCAAGTAAACAGACTAC
TGATGATGATATTCTCAAGATTTATGACCAACTGTATAAAACAGCCATCG
GTGAAAACCAACCTCATCCCCAGCCCCCACAACCTATGAACCAAAGACCT
AAATTCCATAACCAGGATATGCATGACACACCAGGATACTCACATATCGG
AATGAATTCTGCTACATTATCCACAAAAACCAGTGCAGATAACATGTCAC
ACGTCCCCATGTACAAACCCCCTGATTACGATAATTTATATGGTGAGGGA
GTGGATTTTTCACGAGTGCAACTTGACGACGAGAAAAAGCATTCGACTGG
TTCCTATGGTGATTATTCACCTCGAGATCTTTCTTTCACTGAGCAAAATT
ACGATAAGTTGGGCGGAAGAAATCCGAGTTGGGGCGGCTCATCTGATGGC
GGGAAGGGCGAGTATGATCACATCAATTCGAATACTATCGGACGAAAGGT
GGATAATACATACGACCAAATCGATCGCACTGGAACCAGCTTTAAGAAAA
AGCAAGGATCATGGGGTACAGCTGGCTACCCGTTACGCGACGAACCATCC
GTCCCCTGCTTGGATGACTACGACCACTCCTTCAAAGGGAGGAGTCCTAT
ACAACAAacccctgaaaatgaaaaaggctTCATCTTCAGAAATTCCATCT
ACTCTCCTCTCGATTCTTCAAGTCGAAAAAACTCTTCAGCGTCCACAATA
CAAGGGATCGGCTCTCGTCACGACTCCACTGCAAGTGAAGGGGGTCGACC
AATGGGTGCCAGTGCACAGGGAATGGACATACGGCACGATTCAACGGCAA
GCGAAAGCGGACGTCAATTTAGACGTGGGATCAGTATAAAAGAACGTAGT
CACCAAGATATCGCCGACCATTTCATGTATCAAGTTCCCTCGTCTTTGAA
CAGTACCACCGATCAAGAGACGAGTTTTCAACAAGAAGAAGTTTATCAGA
ACACTCAGGGCACTACTCCCGATGAAACATACAGTAACACGTCTTCCAGT
CAAAACACGAACTCAGAACGATCAACCACAGCGTGACTTGCATGTTACTT
TAGGCTTACAAAATTTCGCGAGCatgaactttcgcgaatcgttggataaa
aattagaattttcaaacaaaaattggctaaaaagtGACAAATGTTCCTTG
AATCAGATAAAAACGGTTGttatttgactttaaaaaaggtGTTAAAGtct
aaaaaatgctgaaaactTAATATATATTACGATTTcgaagtttttaaaat
attttaaaattttttaagaatctttcgcgagcataaactagCGCGAATTA
CCCTGttaagaatttaaaaatttgtacgcctaaagtagctGTATGCGAAG
TATGCATGTCAAGGAAGTGGAACAAAATAGCTGGGATACTCTAGTAATTC
TTCGTCGAAAtaagtgtttttcaaaataacccAAAAGCgtcattttcagg
caaaaagaaCCAACAGTTCTCGTGGAGACAAGTTCTTGAATAATTTTCGT
CGAACTCAAAATGTGTCAGCTGTTTGAAATACACGTGACCCAAATAGTAG
GGCTCTCACAAAGTCAAAAAGTCGCTGAGAGGCGTAGCGACGAAGTTCGG
TTAGGAGGGCAAGATTTGAAATATTAGTACCGTGATTTCTCGATACCTTT
GTATCATCCCCTCCCCACAAATGAATGGAAATCCTATTAGAATCGATCCG
AGGATTGTCTGAAGGCTCTGAAGTAAAAGTAGAAATATTATGATGATTTC
CTTATTAATCAGGAACCTTATTAGCTTGGAATACGAGGACAACAGCTTTG
AACTCCCTTAATGCGCTACTATCAGGAGATCGATACAAAACGAGACTATT
AAGATCCACGGGTTATGTAAATTGACGATCGATAGGCTCACCCATTTATG
ACATTTTTATATTATAGCTTAAATTTCTAAATATTCATAACATTTTTATA
AACTTAAAAGTTTTAAACCTGCACGTATAAgcaattttatcaatttttta
agtatttgaggattgtatttttgtaagattttcgTATATTTTTCTAAGAC
TAAAGAATTGAGATAACACAATGACGAGTAAGACTCTCCCATCCATTTTT
GATTTGTTATGAAGTGTAGAATAtctattcaatttttatgagaaattttt
aaccctattcgtccTAGGGGGGACGACTGTTTCTGTTCGAG
Run BLAST on NCBI

protein sequence of TCONS_00055779-protein

>TCONS_00055779-protein ID=TCONS_00055779-protein|Name=TCONS_00055779-protein|organism=Clytia hemisphaerica|type=polypeptide|length=588bp
MVEQDITIHQGWLELYSDSSSGAWGKLSGKKQWKRRFIVFNQSASNEDEC
YLLSYEKEEAWRVAIPKRKLSLYPRYKVCKLNDFKGREKVLEVNNEQEKW
YFASDKMKLINLWACQIQMQTKLSRSISGRIFSVVGASVKDMHNIGAAQQ
RCLLHFTKWGITLALQQSRAILAMWPIKTIRNYEDSGHSEFTIEAGRRAP
MGEGVYKFETNAGQDREMFNVVDAFVAALLDEKARIAGASKQTTDDDILK
IYDQLYKTAIGENQPHPQPPQPMNQRPKFHNQDMHDTPGYSHIGMNSATL
STKTSADNMSHVPMYKPPDYDNLYGEGVDFSRVQLDDEKKHSTGSYGDYS
PRDLSFTEQNYDKLGGRNPSWGGSSDGGKGEYDHINSNTIGRKVDNTYDQ
IDRTGTSFKKKQGSWGTAGYPLRDEPSVPCLDDYDHSFKGRSPIQQTPEN
EKGFIFRNSIYSPLDSSSRKNSSASTIQGIGSRHDSTASEGGRPMGASAQ
GMDIRHDSTASESGRQFRRGISIKERSHQDIADHFMYQVPSSLNSTTDQE
TSFQQEEVYQNTQGTTPDETYSNTSSSQNTNSERSTTA
Run BLAST on NCBI

transcript from alignment at scaffold_259:31039..39227-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055779 ID=TCONS_00055779|Name=TCONS_00055779|organism=Clytia hemisphaerica|type=transcript|length=8189bp|location=Sequence derived from alignment at scaffold_259:31039..39227- (Clytia hemisphaerica)
TCCACAACCAGACACACAGGCAATCCATCACCATCCACAACTCTTCTCAA TCTATAAGTCGTAAGCATTGATTATAAGTTTCTTTTATCCTTGTTTTAGT ATACTTTTTATTGAAGCCAATCTTTAAAGTTTAATCTTGTAGATGAAAGA TTGAATTTGCTTCTCTGCTCTTGCGCGTCTTGGTAGGGTGGACAGGACAA AATTTTCCCCTCAATTTTAAAAAACCAAACTAATTTTATTTGAAAGTCCT TACCTTTGTGAGAAAAATAAGGGGTCATTTATTAAAATTGGTTAAGTATT CCCAAAGTTATTCGATTTTCAAAACACAAAAAAATCACCCTTTTCAAAGA ATCGCCTCCTTACACCACGCCAGCAAGAAATAATTTTCGGAAGCACCAAA ATCGCGCCAAAAATGGCGGATGAAATCTAGTCTTCCGTGTGNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAATCTAGTCTTCCGTG TGGCGGGGTGTGGGGAGTTTTGCCGGTGCGGTCTGAAAATCGGCCCGATG ACTGTTAAACTTTAGCTTATCGCTAATGAGCTGGAGATGCTGGAAATGCT GGAAATGATAGCTAAAAATAAATTTCACCACTAGAAAGCTGAAATCCTCA GCTTTCAGATGGTGTATGATGCTTAAATGAAAAAATCCGCAATCTTGTTA AAAAATCGCAATTTCTTCTTATTTTTCAAAATTCCAGACGGCCTGCAGAT TTTCAAATAAAGCAGGTTGTGATAGATTGTAGCCTAATCTTACCCTGGGT TTACTAAAAAAACCGCGATTGAAAAAAAGAACCAGCTCAATAGCGACAGC CATAGACCTTTTTTCAAAGAGGACGTCCTGTTGAATAATTATGTAGTCCA GCCATAAAAACAATGATAGAGCCATGCATAATTACTGTATCATACATATT GTAATAATTATACATGGTTTTATCATTGTTTTTCTGCTCGATTAAGTTCA ACAAAGTTCGATCAAAAATACCGTTCTATTGATTCAATTAATTACATCTG GCTTAAGTGCTTTCGTGCAGCATAGGGTACAAAGTCCAAATATGTATTTC TCGTAATTTTTGTATTAAGAGTTAGGTCTATACTGCTTGAGCTCTTGAAA ACTAAAAATAATTAAATTCGCTCATCTCTAGAACAAGCACTTTAAAAAAC CATAACATTAGACATAAACTCTGAAAAATCACCAGGAAAGATAAAAAATA ATCCTTATTCGGCTGACAATTAATTATACTCCTGTAGAACCGCCAAATGA TCAAATCACTGAACCCCTGATTTACAGCTGCTTTTACTGACATGGTTGGG CTCGCTTGACCTTGTACATCAAAACGTGATGTGTGTGACGTCATAATTAC TGCTTTCAGTTTGCGTACTTTGAAAGCTTGATGTGTGTACTCCGTCTTTG TGGAGTTTTCTAATGGCATGAAAACAGAATATGCTATGTCTTTTAAGAAC AAATTTCTAAAAGGCTTTTGTGGTTCTGTAGATATTTCTTTTTGGATTAA GAAATTCCATCTTTTATAGACCTTTTCGCCTTTCCATCCACCATATTGAA TTGTATACAAAAATTATGGTGGCCAAATTGCCGTGGTGAAAGTGAAAGTA TTAATATAAAGGGGCCATTCAAAAAGTACGTTCGTCCAAATTTCCCTATT TTCAGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCGTTCGTTT TCGTTCGCTTTTTTGCTGACCCCCTCCCCCCCCCTCGGTGACGAACGTAC TTATTGAATGGCCTCAAAGAAAGAAAGAAAGAAAGAAAAAGAATTATAAA ATAATAAAATAATAAATTAAAAAATCTCTTATAGGAATTCTGATACAAAA CCGTTCCATAATAGCAGAAAATCATAATAATAGCAGATAATTTTAAAGTT TCTGAGAAAATGTGTGGAATTTGTCTGATGACTGGTTTATTCTAAACAAA AAAGAAACCAGGTATAGTTTTTTCTAACCAAGGATATGAAGAGGTCCAGC TATGCACTGATAATTGAGTGTCGTCTGCAAACGATACCAGAAGCACAAGT ACCTGTGGCACACCTGAAATAATCTCTGTTTCTGAGCACAAAGTTGAGTT TACTGAAACTCTATGGGTTCAATGAGATCTGATCCATTCAAGGAGTTTCC CGTTTATGCCATTTTTTTCAAAACTTATGCACCAAAATCGTATGGTCTAC TCTATCAAAAGCTTTACTAAAATCTAAATAGATAACGGTAAGGTTGTTTT CATTTTCATGAATCAGTCTTTCAGTGTGTTGAAGCAATTGACTATCAGCC TTTCCTAAAGCTATGTTGATTATTGTTATATAGATTATTTTCTTCTTAAT GATTCTGTATCTTGGCTCGAACAATCTTTTCAAAGACCTTTGAAACGTGG GATGTGGGATGTGAGGGAAACAGTTTTCTGTACTTGATTCCCTTTCTGAG GTGCTGAAGTTGGTGACAGTGTTCTGATTTCTTTGACAAATTTCTTGATA GTCAGATTGATATCCTTGGGTATTTGTGACTCGAACTGAGGAAGGTCATA GTTCTGTAGAAATTGGGTAAAGACAGACTTGTATTGATTTTGTAGGATAT TTGCAATCGAAAGGGGATCGTAAGTTAAGTTTTAGCGTGTCGGATCAATT AAGGGTCCAACTTTTGGTTTAGATTTGGAGAAGCAATTTGTGTATGAGTA AAAGAATTTTGGATCGATTTGATTTTTGAGGTTGCTCGACCTACTTTCTG CTCCCTTTCTTGAGCAAAGGATTTTTGAAAAAATTTAACAAACTTTTTCT GCAGTTTCTCGGTCTCTAAAATTCGCCTGTCTCTTGGTTCAGTTTTCTTT TTTGATGAAAATATTTTTGAAGGTACATTATTTGAAGAGTAAAAGTTACA AACCGGAGCTTCGTCAGAGACTTTGTCTTTGGTTGTAGTATCAGAGGATA AGGTTGCATCGCTTTGATTGTGTCGTTGAAATTGTAATTTTAGGAAATTA GTCCTTCCCAGGTTTGTTTCATTTTTGTGAGGAAAATGGATGTTTTCGTC TTGACATGCAGACAATAGGAACTTTAATTCCATTAGGAATACATTGTGGA TGAGGTGAGAGTGTGCTGGCCTTGTCTCCTTGTGGTTCATGCACTCGATC CAAAAAGCAGTGTGTTAGTGTCTCTAGGCTTCAGCTCATCCTCTAACAAA AAGAGTTTTTATATTCTAGGAAGTATATCTATAGAGGTCTGCGATTCAGA CTACAGTGTCTCGCAAGCTGGCTGGCAGTATAATTAATCATCTGAGGAAA ATAGGCAATTCTCTAACATGAACCTTTTTTAACGTTGGGATATCAAAAGC TGAATTAGGGTCCCGTGGTCCTCTATTTTAACACAATCATACACAGCTTT TTTGTCGTTTTAAGTCAGCTTGTCTTTCTTCATCTAAATCCTCTATAACT CGAATATCTGTGTGTCTGTCTATGTGTATGTCCCAAAACTTTGGGGCAGC CTGGAGACTTCAAAAATTATCAGATTTGGCTGAAATTTGGTGGGGTATTT TTTTCATTTTTCAAAAGTTTTGACTTTTGGGGCGTGGGGACGAGTTTTTT CCAAAACGATATTTTGTGACTTCAATAATGAGTTTTAAAACTAATTTGTT TTGCTACAATCGGGCCTTTGGGAATAATCTGAAGCTACTGAAGTTGAGCC CAGTGCGTTGCACACGTTCGACTATTTATGTATATAGAACTATTTTTTAT TTCACCTCAATATTCAGGTTATTGACCTTCTTCATGTCGTAACTTTTTTT TTTGTTTCAGTTAAGGATCATGGTGGAACAGGACATCACAATACATCAAG GATGGCTGGAACTTTATTCCGATTCGTCGTCCGGCGCATGGGGCAAACTG TCCGGTAAAAAGCAATGGAAGAGAAGGTTTATTGTGTTCAACCAGTCAGC CAGTAATGAAGATGAATGCTATTTGTTGTCTTACGAAAAAGAAGAGGCGT GGAGAGTTGCAATCCCCAAAAGGAAACTTTCCTTGTATCCACGCTATAAA GTCTGCAAACTGAACGATTTTAAAGGANGTGTCTCGCAAGCTGGCTGGCA GTATAATTAATCATCTGAGGAAAATAGGCAATTCTCTAACATGAACCTTT TTTAACGTTGGGATATCAAAAGCTGAATTAGGGTCCCGTGGTCCTCTATT TTAACACAATCTTACACAACTTTTTTGTCTTTTTAAGTCAGCTTGTCTTT CTTCATCTCAATCCTAACTCGAATATCTGTGTGTTTGTCTATGTGTATGT CCCAAAACTTTGGGGCAGCCTGGAGACTTCAAAAATTATCAGATTTGGCT GAAATTTGGTGGGGCTGGGTGGGGGTGTTTTTTTCATTTTTCAAAAGTTT TGACTTTTTGGGCGTGGGGACGAGTTTTTTTTCCAAAACGATATTTTGTG ACTTCAATAATGAGTTTTAAAACTAGTTTGTTTTGCTACAATCGGGCCTT TGGGAATAATCTGAAGCTATTGAAGTTGAGCCCAGTGCGTTGCACACGTT CGACTATTTATGTATATAGAACTATTTTTTATTTCACCTCAATATTCAGG TTATTGACCTTCTTCATGTCGTTACTTTTTTTTTGTTTCAGTTAAGGATC ATGGTGGAACAGGACATCACAATACATCAAGGATGGCTGGAACTTTATTC AGATTCGTCGTCCGGCGCATGGGGCAAACTGTCCGGTAAAAAGCAATGGA AGAGAAGGTTTATTGTGTTCAACCAGTCAGCCAGTAATGAAGATGAATGC TATTTGTTGTCTTACGAAAAAGAAGAGGCGTGGAGAGTTGCAATCCCCAA AAGGAAACTTTCCTTGTATCCACGCTATAAAGTCTGCAAACTGAACGATT TTAAAGGACGAGAGAAAGTTCTAGAGGTGAACAATGAACAAGAGAAATGG TATTTTGCTTCTGATAAAATGAAACTGATCAATCTTTGGGCGTGCCAGAT TCAAATGCAAACCAAATTGAGTCGATCGATATCAGGAAGGATCTTCAGCG TTGTTGGTGCTTCTGTGAAAGACATGCATAATATAGGTGCTGCTCAGCAA AGGTGTTTACTTCATTTCACCAAATGGGGTATCACATTAGCGCTTCAGCA GTCCAGAGCTATTTTGGCCATGTGGCCGATAAAGACTATTCGAAATTACG AGGATTCGGGACATTCTGAGTTCACCATTGAAGCTGGCAGGCGTGCACCG ATGGGAGAAGGTGTATATAAATTTGAAACAAACGCTGGCCAAGATCGAGA AATGTTTAATGTTGTCGACGCATTTGTTGCAGCGCTATTAGATGAGAAAG CGCGCATTGCTGGTGCAAGTAAACAGACTACTGATGATGATATTCTCAAG ATTTATGACCAACTGTATAAAACAGCCATCGGTGAAAACCAACCTCATCC CCAGCCCCCACAACCTATGAACCAAAGACCTAAATTCCATAACCAGGATA TGCATGACACACCAGGATACTCACATATCGGAATGAATTCTGCTACATTA TCCACAAAAACCAGTGCAGATAACATGTCACACGTCCCCATGTACAAACC CCCTGATTACGATAATTTATATGGTGAGGGAGTGGATTTTTCACGAGTGC AACTTGACGACGAGAAAAAGCATTCGACTGGTTCCTATGGTGATTATTCA CCTCGAGATCTTTCTTTCACTGAGCAAAATTACGATAAGTTGGGCGGAAG AAATCCGAGTTGGGGCGGCTCATCTGATGGCGGGAAGGGCGAGTATGATC ACATCAATTCGAATACTATCGGACGAAAGGTGGATAATACATACGACCAA ATCGATCGCACTGGAACCAGCTTTAAGGTAAGCGCTTCCTCAAAATCTTC AATACAGTGCCCCTTAAATAAACCAGTCATTATAATAGGGGCCATCCATA TAGTACACAGTGAAGGAGTGAAAGGGGGTTTAGCAAAATTGTACGTTTAT TGTTTAAATCGCCTAATTTCAAATATCGCTGCGTAAAAGGGGGAGGGGTA TCAAATATTTGGAATTTTTTCGCGTACGTACCATGAGGACAACTCACACA TAAGCAAACTAAGAGCATTTCGTTTTTTTTGAACGATGCTTAAAATTGCG TGTTCCGAATTTATAATTATAGAATCAAATTTCCTGTTACGGTTATGACA ATGAGTTATAGGTACCTAGTGTACGATACTGTTTGATAGATATAAACATA CATAAATAAACTATCATTACTCCTTTAATTTTCACTAACCTGAATTTATT CCTCATATAGGGTTTTTTTGTGTCTTGGAGATAACAACGAATTTCCAATT TTAGGCAGTTGAAATATTTCGATTTCGTCTTCTTTTATCCATAGAAAAAG CAAGGATCATGGGGTACAGCTGGCTACCCGTTACGCGACGAACCATCCGT CCCCTGCTTGGATGACTACGACCACTCCTTCAAAGGGAGGAGTCCTATAC AACAAACCCCTGAAAATGAAAAAGGCTTCATCTTCAGAAATTCCATCTAC TCTCCTCTCGATTCTTCAAGTCGAAAAAACTCTTCAGCGTCCACAATACA AGGGATCGGCTCTCGTCACGACTCCACTGCAAGTGAAGGGGGTCGACCAA TGGGTGCCAGTGCACAGGGAATGGACATACGGCACGATTCAACGGCAAGC GAAAGCGGACGTCAATTTAGACGTGGGATCAGTATAAAAGAACGTAGTCA CCAAGATATCGCCGACCATTTCATGTATCAAGTTCCCTCGTCTTTGAACA GTACCACCGATCAAGAGACGAGTTTTCAACAAGAAGAAGTTTATCAGAAC ACTCAGGGCACTACTCCCGATGAAACATACAGTAACACGTCTTCCAGTCA AAACACGAACTCAGAACGATCAACCACAGCGTGACTTGCATGTTACTTTA GGCTTACAAAATTTCGCGAGCATGAACTTTCGCGAATCGTTGGATAAAAA TTAGAATTTTCAAACAAAAATTGGCTAAAAAGTGACAAATGTTCCTTGAA TCAGATAAAAACGGTTGTTATTTGACTTTAAAAAAGGTGTTAAAGTCTAA AAAATGCTGAAAACTTAATATATATTACGATTTCGAAGTTTTTAAAATAT TTTAAAATTTTTTAAGAATCTTTCGCGAGCATAAACTAGCGCGAATTACC CTGTTAAGAATTTAAAAATTTGTACGCCTAAAGTAGCTGTATGCGAAGTA TGCATGTCAAGGAAGTGGAACAAAATAGCTGGGATACTCTAGTAATTCTT CGTCGAAATAAGTGTTTTTCAAAATAACCCAAAAGCGTCATTTTCAGGCA AAAAGAACCAACAGTTCTCGTGGAGACAAGTTCTTGAATAATTTTCGTCG AACTCAAAATGTGTCAGCTGTTTGAAATACACGTGACCCAAATAGTAGGG CTCTCACAAAGTCAAAAAGTCGCTGAGAGGCGTAGCGACGAAGTTCGGTT AGGAGGGCAAGATTTGAAATATTAGTACCGTGATTTCTCGATACCTTTGT ATCATCCCCTCCCCACAAATGAATGGAAATCCTATTAGAATCGATCCGAG GATTGTCTGAAGGCTCTGAAGTAAAAGTAGAAATATTATGATGATTTCCT TATTAATCAGGAACCTTATTAGCTTGGAATACGAGGACAACAGCTTTGAA CTCCCTTAATGCGCTACTATCAGGAGATCGATACAAAACGAGACTATTAA GATCCACGGGTTATGTAAATTGACGATCGATAGGCTCACCCATTTATGAC ATTTTTATATTATAGCTTAAATTTCTAAATATTCATAACATTTTTATAAA CTTAAAAGTTTTAAACCTGCACGTATAAGCAATTTTATCAATTTTTTAAG TATTTGAGGATTGTATTTTTGTAAGATTTTCGTATATTTTTCTAAGACTA AAGAATTGAGATAACACAATGACGAGTAAGACTCTCCCATCCATTTTTGA TTTGTTATGAAGTGTAGAATATCTATTCAATTTTTATGAGAAATTTTTAA CCCTATTCGTCCTAGGGGGGACGACTGTTTCTGTTCGAG

Coding sequence (CDS) from alignment at scaffold_259:31039..39227-

>TCONS_00055779 ID=TCONS_00055779|Name=TCONS_00055779|organism=Clytia hemisphaerica|type=CDS|length=3534bp|location=Sequence derived from alignment at scaffold_259:31039..39227- (Clytia hemisphaerica)
AAAAAGCAAGGATCATGGGGTACAGCTGGCTACCCGTTACGCGACGAACC
ATCCGTCCCCTGCTTGGATGACTACGACCACTCCTTCAAAGGGAGGAGTC
CTATACAACAAACCCCTGAAAATGAAAAAGGCTTCATCTTCAGAAATTCC
ATCTACTCTCCTCTCGATTCTTCAAGTCGAAAAAACTCTTCAGCGTCCAC
AATACAAGGGATCGGCTCTCGTCACGACTCCACTGCAAGTGAAGGGGGTC
GACCAATGGGTGCCAGTGCACAGGGAATGGACATACGGCACGATTCAACG
GCAAGCGAAAGCGGACGTCAATTTAGACGTGGGATCAGTATAAAAGAACG
TAGTCACCAAGATATCGCCGACCATTTCATGTATCAAGTTCCCTCGTCTT
TGAACAGTACCACCGATCAAGAGACGAGTTTTCAACAAGAAGAAGTTTAT
CAGAACACTCAGGGCACTACTCCCGATGAAACATACAGTAACACGTCTTC
CAGTCAAAACACGAACTCAGAACGATCAACCACAGCGTGAATGGTGGAAC
AGGACATCACAATACATCAAGGATGGCTGGAACTTTATTCAGATTCGTCG
TCCGGCGCATGGGGCAAACTGTCCGGTAAAAAGCAATGGAAGAGAAGGTT
TATTGTGTTCAACCAGTCAGCCAGTAATGAAGATGAATGCTATTTGTTGT
CTTACGAAAAAGAAGAGGCGTGGAGAGTTGCAATCCCCAAAAGGAAACTT
TCCTTGTATCCACGCTATAAAGTCTGCAAACTGAACGATTTTAAAGGACG
AGAGAAAGTTCTAGAGGTGAACAATGAACAAGAGAAATGGTATTTTGCTT
CTGATAAAATGAAACTGATCAATCTTTGGGCGTGCCAGATTCAAATGCAA
ACCAAATTGAGTCGATCGATATCAGGAAGGATCTTCAGCGTTGTTGGTGC
TTCTGTGAAAGACATGCATAATATAGGTGCTGCTCAGCAAAGGTGTTTAC
TTCATTTCACCAAATGGGGTATCACATTAGCGCTTCAGCAGTCCAGAGCT
ATTTTGGCCATGTGGCCGATAAAGACTATTCGAAATTACGAGGATTCGGG
ACATTCTGAGTTCACCATTGAAGCTGGCAGGCGTGCACCGATGGGAGAAG
GTGTATATAAATTTGAAACAAACGCTGGCCAAGATCGAGAAATGTTTAAT
GTTGTCGACGCATTTGTTGCAGCGCTATTAGATGAGAAAGCGCGCATTGC
TGGTGCAAGTAAACAGACTACTGATGATGATATTCTCAAGATTTATGACC
AACTGTATAAAACAGCCATCGGTGAAAACCAACCTCATCCCCAGCCCCCA
CAACCTATGAACCAAAGACCTAAATTCCATAACCAGGATATGCATGACAC
ACCAGGATACTCACATATCGGAATGAATTCTGCTACATTATCCACAAAAA
CCAGTGCAGATAACATGTCACACGTCCCCATGTACAAACCCCCTGATTAC
GATAATTTATATGGTGAGGGAGTGGATTTTTCACGAGTGCAACTTGACGA
CGAGAAAAAGCATTCGACTGGTTCCTATGGTGATTATTCACCTCGAGATC
TTTCTTTCACTGAGCAAAATTACGATAAGTTGGGCGGAAGAAATCCGAGT
TGGGGCGGCTCATCTGATGGCGGGAAGGGCGAGTATGATCACATCAATTC
GAATACTATCGGACGAAAGGTGGATAATACATACGACCAAATCGATCGCA
CTGGAACCAGCTTTAAGAAAAAGCAAGGATCATGGGGTACAGCTGGCTAC
CCGTTACGCGACGAACCATCCGTCCCCTGCTTGGATGACTACGACCACTC
CTTCAAAGGGAGGAGTCCTATACAACAAACCCCTGAAAATGAAAAAGGCT
TCATCTTCAGAAATTCCATCTACTCTCCTCTCGATTCTTCAAGTCGAAAA
AACTCTTCAGCGTCCACAATACAAGGGATCGGCTCTCGTCACGACTCCAC
TGCAAGTGAAGGGGGTCGACCAATGGGTGCCAGTGCACAGGGAATGGACA
TACGGCACGATTCAACGGCAAGCGAAAGCGGACGTCAATTTAGACGTGGG
ATCAGTATAAAAGAACGTAGTCACCAAGATATCGCCGACCATTTCATGTA
TCAAGTTCCCTCGTCTTTGAACAGTACCACCGATCAAGAGACGAGTTTTC
AACAAGAAGAAGTTTATCAGAACACTCAGGGCACTACTCCCGATGAAACA
TACAGTAACACGTCTTCCAGTCAAAACACGAACTCAGAACGATCAACCAC
AGCGTGAATGGTGGAACAGGACATCACAATACATCAAGGATGGCTGGAAC
TTTATTCAGATTCGTCGTCCGGCGCATGGGGCAAACTGTCCGGTAAAAAG
CAATGGAAGAGAAGGTTTATTGTGTTCAACCAGTCAGCCAGTAATGAAGA
TGAATGCTATTTGTTGTCTTACGAAAAAGAAGAGGCGTGGAGAGTTGCAA
TCCCCAAAAGGAAACTTTCCTTGTATCCACGCTATAAAGTCTGCAAACTG
AACGATTTTAAAGGACGAGAGAAAGTTCTAGAGGTGAACAATGAACAAGA
GAAATGGTATTTTGCTTCTGATAAAATGAAACTGATCAATCTTTGGGCGT
GCCAGATTCAAATGCAAACCAAATTGAGTCGATCGATATCAGGAAGGATC
TTCAGCGTTGTTGGTGCTTCTGTGAAAGACATGCATAATATAGGTGCTGC
TCAGCAAAGGTGTTTACTTCATTTCACCAAATGGGGTATCACATTAGCGC
TTCAGCAGTCCAGAGCTATTTTGGCCATGTGGCCGATAAAGACTATTCGA
AATTACGAGGATTCGGGACATTCTGAGTTCACCATTGAAGCTGGCAGGCG
TGCACCGATGGGAGAAGGTGTATATAAATTTGAAACAAACGCTGGCCAAG
ATCGAGAAATGTTTAATGTTGTCGACGCATTTGTTGCAGCGCTATTAGAT
GAGAAAGCGCGCATTGCTGGTGCAAGTAAACAGACTACTGATGATGATAT
TCTCAAGATTTATGACCAACTGTATAAAACAGCCATCGGTGAAAACCAAC
CTCATCCCCAGCCCCCACAACCTATGAACCAAAGACCTAAATTCCATAAC
CAGGATATGCATGACACACCAGGATACTCACATATCGGAATGAATTCTGC
TACATTATCCACAAAAACCAGTGCAGATAACATGTCACACGTCCCCATGT
ACAAACCCCCTGATTACGATAATTTATATGGTGAGGGAGTGGATTTTTCA
CGAGTGCAACTTGACGACGAGAAAAAGCATTCGACTGGTTCCTATGGTGA
TTATTCACCTCGAGATCTTTCTTTCACTGAGCAAAATTACGATAAGTTGG
GCGGAAGAAATCCGAGTTGGGGCGGCTCATCTGATGGCGGGAAGGGCGAG
TATGATCACATCAATTCGAATACTATCGGACGAAAGGTGGATAATACATA
CGACCAAATCGATCGCACTGGAACCAGCTTTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035119XLOC_035119Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055779-proteinTCONS_00055779-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055779-exon-scaffold_259-1575043694:39168..39227TCONS_00055779-exon-scaffold_259-1575043694:39168..39227Clytia hemisphaericaexon
TCONS_00055779-exon-scaffold_259-1575043694:33251..34486TCONS_00055779-exon-scaffold_259-1575043694:33251..34486Clytia hemisphaericaexon
TCONS_00055779-exon-scaffold_259-1575043694:31039..32733TCONS_00055779-exon-scaffold_259-1575043694:31039..32733Clytia hemisphaericaexon
TCONS_00055779-exon-scaffold_259-1510915933:39168..39227TCONS_00055779-exon-scaffold_259-1510915933:39168..39227Clytia hemisphaericaexon
TCONS_00055779-exon-scaffold_259-1510915933:33251..34486TCONS_00055779-exon-scaffold_259-1510915933:33251..34486Clytia hemisphaericaexon
TCONS_00055779-exon-scaffold_259-1510915933:31039..32733TCONS_00055779-exon-scaffold_259-1510915933:31039..32733Clytia hemisphaericaexon
TCONS_00055779-exon-scaffold_259-1491911889:39168..39227TCONS_00055779-exon-scaffold_259-1491911889:39168..39227Clytia hemisphaericaexon
TCONS_00055779-exon-scaffold_259-1491911889:33251..34486TCONS_00055779-exon-scaffold_259-1491911889:33251..34486Clytia hemisphaericaexon
TCONS_00055779-exon-scaffold_259-1491911889:31039..32733TCONS_00055779-exon-scaffold_259-1491911889:31039..32733Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_259supercontigscaffold_259:31039..39227 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0.663943 tpm) - - (40.6531 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.63979 2.81049 0.707518 0.663943 12.8982 9.47207 10.1816 10.33 5.67409 9.22461 6.42129 4.7222 8.04033 7.05519 7.91479 10.9184 7.10341 8.35031 6.24945 7.98654 4.21684 4.02344 6.93077 5.71617 8.43421 8.23608 19.6721 14.5563 39.9295 40.6531
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR002404IRS_PTB
IPR011993PH_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005158insulin receptor binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005158 insulin receptor binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055779 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
5001000150020002500Sequence
Match NameE-valueIdentityDescription
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