Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055822 ID=TCONS_00055822|Name=TCONS_00055822|organism=Clytia hemisphaerica|type=transcript|length=477bp CCCCATTTAGGTAAATAAAGACTCTAAGATAAAATTTCACGTATATATAT GAAAAATACACAACTCTAAGATAAAAATGCATGTACATGAAAAATACACA ACTCTAAGATAAAAATGCATGTACATGAAAAATACACAACTCTAAGATAA AAATGCATGTACATGAAAAATACACAACTAACTCTCAGATAAAAATGTGC ATGCACAAGAAAAATATCAACCTGTATGAGATAAAAATATATGGAGTAGA TAAAATACTAACTCTAGATAAAAACACATGTAATAAGATAAAAACAAGTC TTGGATAAAAATACAAACTTTAAGATAAAATGAGACCTTTCAAGACCCAG ACCAAAAGTGAGCCTAAGTTAAGGAATTTAAgacaaaaaaacgtgtaaca gtTAAAATTAgtataaaacttgttttctaGATCAACATTGTATTTCTTCC AATAATGAAACATTTGTAGAAGGGCTN Run BLAST on NCBI transcript from alignment at scaffold_260:13928..14562- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055822 ID=TCONS_00055822|Name=TCONS_00055822|organism=Clytia hemisphaerica|type=transcript|length=635bp|location=Sequence derived from alignment at scaffold_260:13928..14562- (Clytia hemisphaerica) CCCCATTTAGGTAAATAAAGACTCTAAGATAAAATTTCACGTATATATAT
GAAAAATACACAACTCTAAGATAAAAATGCATGTACATGAAAAATACACA
ACTCTCAGATAAAAATGTGCATGCACATGAAAAATACACAACTCTAAGAT
AAAAATGCATGTACATGAAAAATACACAACTCTCAGATAAAAATGTGCAT
GCACATGAAAAATACACAACTCTAAGATAAAAATGCATGTACATGAAAAA
TACACAACTCTCAGATAAAAATGTGCATGCACATGAAAAATACACAACTC
TAAGATAAAAATGCATGTACATGAAAAATACACAACTAACTCTCAGATAA
AAATGTGCATGCACAAGAAAAATATCAACCTGTATGAGATAAAAATATAT
GGAGTAGATAAAATACTAACTCTAGATAAAAACACATGTAATAAGATAAA
AACAAGTCTTGGATAAAAATACAAACTTTAAGATAAAATGAGACCTTTCA
AGACCCAGACCAAAAGTGAGCCTAAGTTAAGGAATTTAAGACAAAAAAAC
GTGTAACAGTTAAAATTAGTATAAAACTTGTTTTCTAGATCAACATTGTA
TTTCTTCCAATAATGAAACATTTGTAGAAGGGCTN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00055822-exon-scaffold_260-1575043694:14477..14562 | TCONS_00055822-exon-scaffold_260-1575043694:14477..14562 | Clytia hemisphaerica | exon |
TCONS_00055822-exon-scaffold_260-1575043694:14321..14358 | TCONS_00055822-exon-scaffold_260-1575043694:14321..14358 | Clytia hemisphaerica | exon |
TCONS_00055822-exon-scaffold_260-1575043694:13928..14280 | TCONS_00055822-exon-scaffold_260-1575043694:13928..14280 | Clytia hemisphaerica | exon |
TCONS_00055822-exon-scaffold_260-1510915933:14477..14562 | TCONS_00055822-exon-scaffold_260-1510915933:14477..14562 | Clytia hemisphaerica | exon |
TCONS_00055822-exon-scaffold_260-1510915933:14321..14358 | TCONS_00055822-exon-scaffold_260-1510915933:14321..14358 | Clytia hemisphaerica | exon |
TCONS_00055822-exon-scaffold_260-1510915933:13928..14280 | TCONS_00055822-exon-scaffold_260-1510915933:13928..14280 | Clytia hemisphaerica | exon |
TCONS_00055822-exon-scaffold_260-1491911889:14477..14562 | TCONS_00055822-exon-scaffold_260-1491911889:14477..14562 | Clytia hemisphaerica | exon |
TCONS_00055822-exon-scaffold_260-1491911889:14321..14358 | TCONS_00055822-exon-scaffold_260-1491911889:14321..14358 | Clytia hemisphaerica | exon |
TCONS_00055822-exon-scaffold_260-1491911889:13928..14280 | TCONS_00055822-exon-scaffold_260-1491911889:13928..14280 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_260 | supercontig | scaffold_260:13928..14562 - |
Blast
The following BLAST results are available for this feature:
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