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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055886 ID=TCONS_00055886|Name=TCONS_00055886|organism=Clytia hemisphaerica|type=transcript|length=1012bp
tagaatttttaaagacatttactttcgcgaaaagggccaaaattcgcgaa
aatcgcgaaagtttctgctcgcgaaagtttctacgcctaaagtaactttt
aaaaattctaaaaccaATATGTACCTCcgaaaactttgaaatattattac
gtaaagctagccatcgaaatgaccatgcctattcGAGCCACCAAGGTGAC
CAAGAACCACTAcgtaattaaaaaagaaaaaagccctTTTTGGaattaac
ttttaaaaattctaaaaccaATATGTACCTCcgaaaactttgaaatatta
ttacgtaaagctagccatcgaaatgaccatgcctattcGATCGAGCCACC
AAGACCAAGTACCACCACgtaattgaaaaagaaaaaaaacttttctgtaa
ttaacttttaaaaattctaaaaccaATATGTACCTccgaaaactttgaaa
taataCGTTAGCCATCgaaatgaccatgcctattcGAGCCACCAAGGTGA
CCAAGAACCACTACGTAAttgaacaagaaaaaaaacctttcaggaattaa
cttttgaaaattctaaaaccaATATCTACttccaaaaactttgaaatatt
aCTTTAAAGCTAGCCATCAAAATGACCACGCATGCGCCTATTCGAGCCAA
AGATTAGAAGGTGACCAAGAACCACTGCGTAGTTAAAAGGAAAAAACTTT
ACACATCAGCAGAGAGACAGAGAGAgtactaatttttgaaaattgtaaca
GACCTCAAAGACCTTTTTGAAATGTTGTGATATTGCCTGTTTGAGTAACT
TATGGAACTTTGGAAAAATGTTATATGCTCAGTTGATTATTTAACTACCC
TTATAAACAGATAAAAACGACTGAACCCCTTTTCCAAAAACTTACTTAAA
TGCTTGTTTTGACTTCTTGTGTGATTAGCAGATTCAGCATTATTCAGTAG
AATCAGCAGTACCCAAAACTGAAGAATGTAAAAGGTTTGTACTTACAGTT
TCAAAATCCTGC Run BLAST on NCBI transcript from alignment at scaffold_264:85591..86602 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055886 ID=TCONS_00055886|Name=TCONS_00055886|organism=Clytia hemisphaerica|type=transcript|length=1012bp|location=Sequence derived from alignment at scaffold_264:85591..86602 (Clytia hemisphaerica)
GCAGGATTTTGAAACTGTAAGTACAAACCTTTTACATTCTTCAGTTTTGG
GTACTGCTGATTCTACTGAATAATGCTGAATCTGCTAATCACACAAGAAG
TCAAAACAAGCATTTAAGTAAGTTTTTGGAAAAGGGGTTCAGTCGTTTTT
ATCTGTTTATAAGGGTAGTTAAATAATCAACTGAGCATATAACATTTTTC
CAAAGTTCCATAAGTTACTCAAACAGGCAATATCACAACATTTCAAAAAG
GTCTTTGAGGTCtgttacaattttcaaaaattagtacTCTCTCTGTCTCT
CTGCTGATGTGTAAAGTTTTTTCCTTTTAACTACGCAGTGGTTCTTGGTC
ACCTTCTAATCTTTGGCTCGAATAGGCGCATGCGTGGTCATTTTGATGGC
TAGCTTTAAAGtaatatttcaaagtttttggaaGTAGATATtggttttag
aattttcaaaagttaattcctgaaaggttttttttcttgttcaaTTACGT
AGTGGTTCTTGGTCACCTTGGTGGCTCgaataggcatggtcatttcGATG
GCTAACGtattatttcaaagttttcggAGGTACATATtggttttagaatt
tttaaaagttaattacagaaaagttttttttctttttcaattacGTGGTG
GTACTTGGTCTTGGTGGCTCGATCgaataggcatggtcatttcgatggct
agctttacgtaataatatttcaaagttttcgGAGGTACATATtggtttta
gaatttttaaaagttaattCCAAAAagggcttttttcttttttaattacg
TAGTGGTTCTTGGTCACCTTGGTGGCTCgaataggcatggtcatttcgat
ggctagctttacgtaataatatttcaaagttttcgGAGGTACATATtggt
tttagaatttttaaaagttactttaggcgtagaaactttcgcgagcagaa
actttcgcgattttcgcgaattttggcccttttcgcgaaagtaaatgtct
ttaaaaattcta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055886-exon-scaffold_264-1491911889:85591..86602 | TCONS_00055886-exon-scaffold_264-1491911889:85591..86602 | Clytia hemisphaerica | exon |
| TCONS_00055886-exon-scaffold_264-1510915933:85591..86602 | TCONS_00055886-exon-scaffold_264-1510915933:85591..86602 | Clytia hemisphaerica | exon |
| TCONS_00055886-exon-scaffold_264-1575043694:85591..86602 | TCONS_00055886-exon-scaffold_264-1575043694:85591..86602 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_264 | supercontig | scaffold_264:85591..86602 . |
Blast
The following BLAST results are available for this feature:
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