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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055906 ID=TCONS_00055906|Name=TCONS_00055906|organism=Clytia hemisphaerica|type=transcript|length=1437bp
AACATTTCTAAgtagatttgaaaaaaattcaaagaagaaTCAAAAAAATA
ACGTATAAGAAACAGAACTGAATCATTTCTTTGTGATTGGTTGTAAGACC
TTATGAACAGAATTTTTTCGTGTTTTCTTACAGTAGTTTCAACATCAATG
ATAGAAAAATATagtcttgaaaagaaaaaagaagaagaagaagaaaatag
aaaagcaaAGTAGAGGATAAGAAATAAGTAAGTAACACAAGCAAACTTTC
GACAAAAAAAAGTTGTacatattcatttttcaatttttcttcagaatTGT
GGTTTATGCGATTTCTATATTGAAGTAAAAAACAAGGGCTTATGGGTTTT
GTTAAGATTTTTTctcccttttcaaaaatatagtaATGTACAGTAAGGTC
ACGGTGGAAGGCTCAACTAGTACTTTTTGTTCAGATTTGATGACAGTGCC
GCTGCTTTGATGGATGAGGGGTGTAGCCAGTGTCTCTTTATTGTTACATT
GTTGCATGGTATTGTGACGTCGCCTAGAAAGATACGTTTTAGGAGTGACC
AAAGCCCTAAACTAAAGGGTGTTTGAATTCAAAGTCAGTAAGGTGCTGTC
TCAGATGTTATCGCAGACAGATCCTTGTTACGTTTTGTTTATGACATTAT
CAATGTCATTCATGTCTTAGTGACTCGGTGAGAATGTTTCAGCCAGTTTG
GATCAGTGAAATTTGGAGTAGAATTTCTACGAAAGACAGGTAGTTTTGTA
AACTGACACTAGTTTTTGTCATTGGACAGGCGGACTACTGGAGTTGTGAT
AAGAATACAAAAGATTACAAAATAATGAAGGTCAAAGATAATCACTTCAC
ATGACGTTAAAGAAATGTCCGAGTAACGAGGCATTTATATTTAAATActt
aaaagtaaatatcattATTTTGATGCCGGTATAATAAGCTTAATTTTCAA
AACCAATTACCATCTTGGACGATTAAGAGTAATCAATGTGTTCCTTTTTC
ACATAAGGGTACGTCTTCCAATCAAATTAGACATTTGAGCCTTGTAGATA
TTATAGGATGTACATACATTAGAGTGAGTTTTCTTGGTTTTTGGTTGTCG
AGAAAGCCGGTGAGCacgataaaaacttttttaacgaGACATTGCTAAAT
GTCTTTGACCACTCGAGAGTTTTCCCATGCACACGATGTTGAGTATATGA
GGCTTAGAGAtccgaaagcagccggcgaggcgaccttttttccgatgtgt
tctgagagtatgtttcagctataaattttgatctgttctgataagatctt
cgaaaattagtcaactagaaataatgatgtgttctgccgagacaggggta
taatcaaggtgatcaaacgtgttcttgttgtctaggtaaccctagaaagc
ttcagaacacatcttttaaggagacaggggtacaatc Run BLAST on NCBI transcript from alignment at scaffold_265:61259..62695 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055906 ID=TCONS_00055906|Name=TCONS_00055906|organism=Clytia hemisphaerica|type=transcript|length=1437bp|location=Sequence derived from alignment at scaffold_265:61259..62695 (Clytia hemisphaerica)
gattgtacccctgtctccttaaaagatgtgttctgaagctttctagggtt
acctagacaacaagaacacgtttgatcaccttgattatacccctgtctcg
gcagaacacatcattatttctagttgactaattttcgaagatcttatcag
aacagatcaaaatttatagctgaaacatactctcagaacacatcggaaaa
aaggtcgcctcgccggctgctttcggaTCTCTAAGCCTCATATACTCAAC
ATCGTGTGCATGGGAAAACTCTCGAGTGGTCAAAGACATTTAGCAATGTC
tcgttaaaaaagtttttatcgtGCTCACCGGCTTTCTCGACAACCAAAAA
CCAAGAAAACTCACTCTAATGTATGTACATCCTATAATATCTACAAGGCT
CAAATGTCTAATTTGATTGGAAGACGTACCCTTATGTGAAAAAGGAACAC
ATTGATTACTCTTAATCGTCCAAGATGGTAATTGGTTTTGAAAATTAAGC
TTATTATACCGGCATCAAAATaatgatatttacttttaagTATTTAAATA
TAAATGCCTCGTTACTCGGACATTTCTTTAACGTCATGTGAAGTGATTAT
CTTTGACCTTCATTATTTTGTAATCTTTTGTATTCTTATCACAACTCCAG
TAGTCCGCCTGTCCAATGACAAAAACTAGTGTCAGTTTACAAAACTACCT
GTCTTTCGTAGAAATTCTACTCCAAATTTCACTGATCCAAACTGGCTGAA
ACATTCTCACCGAGTCACTAAGACATGAATGACATTGATAATGTCATAAA
CAAAACGTAACAAGGATCTGTCTGCGATAACATCTGAGACAGCACCTTAC
TGACTTTGAATTCAAACACCCTTTAGTTTAGGGCTTTGGTCACTCCTAAA
ACGTATCTTTCTAGGCGACGTCACAATACCATGCAACAATGTAACAATAA
AGAGACACTGGCTACACCCCTCATCCATCAAAGCAGCGGCACTGTCATCA
AATCTGAACAAAAAGTACTAGTTGAGCCTTCCACCGTGACCTTACTGTAC
ATtactatatttttgaaaagggagAAAAAATCTTAACAAAACCCATAAGC
CCTTGTTTTTTACTTCAATATAGAAATCGCATAAACCACAattctgaaga
aaaattgaaaaatgaatatgtACAACTTTTTTTTGTCGAAAGTTTGCTTG
TGTTACTTACTTATTTCTTATCCTCTACTttgcttttctattttcttctt
cttcttcttttttcttttcaagactATATTTTTCTATCATTGATGTTGAA
ACTACTGTAAGAAAACACGAAAAAATTCTGTTCATAAGGTCTTACAACCA
ATCACAAAGAAATGATTCAGTTCTGTTTCTTATACGTTATTTTTTTGAtt
cttctttgaatttttttcaaatctacTTAGAAATGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055906-exon-scaffold_265-1491911889:61259..62695 | TCONS_00055906-exon-scaffold_265-1491911889:61259..62695 | Clytia hemisphaerica | exon |
| TCONS_00055906-exon-scaffold_265-1510915933:61259..62695 | TCONS_00055906-exon-scaffold_265-1510915933:61259..62695 | Clytia hemisphaerica | exon |
| TCONS_00055906-exon-scaffold_265-1575043694:61259..62695 | TCONS_00055906-exon-scaffold_265-1575043694:61259..62695 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_265 | supercontig | scaffold_265:61259..62695 . |
Blast
The following BLAST results are available for this feature:
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