TCONS_00056196 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056196
Unique NameTCONS_00056196
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length782

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056196 ID=TCONS_00056196|Name=TCONS_00056196|organism=Clytia hemisphaerica|type=transcript|length=782bp
TGCAAAAAAATTGATCTtagttgattatttttttatttttctgtttattA
GAGGTTAAATTTGCTGTTTGGAATAGTTTTATGATGTCTATCGCTATTTA
GAAAACTTACAACATTGGATACCCAACATAAAAAGGGTTGACCCTGGCGA
GAACCAAGTGAAACCctgcgagtgggaatcaaaACCTCAGTCACCTGTGT
AGCATCCAAGGttaatgactactggtactataCCACAAGCGACATAACAT
ACCAAAACGACACATCGCACCTATAGCAAATGAGGTTGTTGCCATGACAT
TAACGATCGCTGCTCTAGTCACCGTCATCCAATTCTGGTTAAGACTTGCC
ACCTTCCTTCATGGACCTCTAAAATCATTTCTACTTCATGTACTCCATAA
CCTCTCAAATGACCCTACATACAATGGTCTACCTCAAGACCCTCAAAAAC
TTTATCTAGAACTTTCGACACCTGCCAATCGAAAGACGATAAATGACTTG
AAGAATGGAAAAAAcggaaaaaagaaagttttacaaCAAGATCAGGTGGA
CGCATTACTGCCTCCTACTGTAAACGCAACCGACTCTTCTCAATTTGATG
TGACGCTCATCTGTATTTTGATTATCAATTTTACCGATCTTCCTGCTCCT
CTCAAAGGATGGAAAAACAAAAATCCACCTACAACTGACTTGAGTATCGG
TGCATTTGTAATTCGTGCAAGAGAATGGCGAAACTACATTCACCACACGG
ATCCAgataaaatcaatcaaacagAATTTAAT
Run BLAST on NCBI

transcript from alignment at scaffold_269:89477..102699+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056196 ID=TCONS_00056196|Name=TCONS_00056196|organism=Clytia hemisphaerica|type=transcript|length=13223bp|location=Sequence derived from alignment at scaffold_269:89477..102699+ (Clytia hemisphaerica)
TGCAAAAAAATTGATCTtagttgattatttttttatttttctgtttattA
GAGGTTAAATTTGCTGTTTGGAATAGTTTTATGATGTCTATCGCTATTTA
GAAAACTTACAACATTGGATACCCAACATAAAAAGGTAATTAGAGCTAAC
TTTTATTATTCTTAGATGAAATAATCACACTAAACGACTTTAGGGCCAGT
CCATACCTGACACCTATTTATGCTTAGGTTTCCACCCCCCCCTCACCATT
AATAGAATGCAATAAATATAACAGGGCTTATTATTAGTGGTTGAAAAGCT
GATgcctataagaaaaataaatatttccattATAGGCGCTATttcatgtt
tgctttgaaagaaccaatcactgGACGCTAAAgtttagtggttgaaaagt
tacaGAAGTTATAGATAATTTTCTTATAAGgctgatgcttataagaaaaa
taaatatttaaattaTAGGCGTAGTTTTATGTTTGCTTTCAAAGAACCAA
TCATCGAAAGCTAAAACTCAGTGGTTAAAAAGTATggattattttcttat
aaagatgagcTATTAAGAGAGGGGCTATTTTGTGTTTGCTTTGCAAGAAC
TAATCACCGAATGCTAATAATttttagttcaaaagttatggatttttttc
ttatattgttgatgcttataaataaTATTTCTATTTTAGGCGCCATTCCA
TTTTGCCTTGAAAAAACTTGCAAATCCACACTGAGCAAATTTTTCAGGCG
CTTGCAATAACGCAGCTATAGATAATTTTCATAAATATTGGAATTatgtt
taaaatgaaaatatttatttttcttataagcatcaactttctaagaaaat
gatctacacgttttcttttttttaggaAACACACTTtaaagaaacatgag
gctcagaatgcctaaaagctaagaaacatctaagaaaatgctgaggctga
gaatgagaaaataagattttttaatttgttttttttaagaacctttcatt
ttttttttcatgaaaataggCTGataatgtcaaaaagtttagaaacatgt
aagaaacatttaaggctcaaaaggccgatttcttaagaaacattgaggct
gcttggtaaaactagtttcttaaaaaaaaacgtgtataaccTTCCAACaa
taagttttagctttcggtgattatAGTTATTAGtgatgaaatatttattt
tccttaTAAGCACCAATTTTACCAGAAAATGATCTATACTTTTTCAACCA
ACCTCGTACCCAGGGCGATAAGCTTTTTGACGTTATAGATGGGCGCTTAG
GCCCTGGTCTAGGCCAGCTCTTTAACCAATCAGAGCGCGGCATTTTTGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTTTACATTTCATGACATCAGAAAA
TTTATGTTCAATGTGATCAggataaaaagatgaaaaaattttgaattcag
gaaaaaattcaaacaaaatgcgAGCAATCAACACCTTTACAGATGAGACG
TAAGATTTCCACTCATTtacatttggaagtagctgagAAGTCTTCAATTC
ACTTATCTTTCCAATAGGTTTGGCGTTTGGAAGGTCTTTAAAGTCCAAAC
GGTTTGCCACTAGGTTGGAGGCAAATAGGTGCAAATCTTTATTTTGAATT
GCTTTTCGCATATGGTCCATTTTGATTTTAAGGTCCCAGTTATCACCAGT
GCCCCGAAGGGTTGCACCTTTTTTCAGTAGTACAACAGCTTTATCCATAA
AATGGCTACCGATAGCATTTAAAAGAGTGTCTCTGGTAGAGTAGGAAAGA
CAAACCCCCATTCGGTTCAGTCTTTGTTGGagctaaaaataatcaaattt
aaaacacTGAGACTTTCTATTTTTCCCTTTTCTGTTTACAGAAGATGCTA
TCCACTTTCGAGGGGTGAGGTACTAAAAAATCTGACAAGCCCttgaaaaa
attaccaaaataaccaaaaatcacaaaaaatttcattaaaaagagtTGAA
Cgtaaaagaaaagtgaaaataaaaaaagatcaccaaaaaatcataaaatc
accCTGGTCTGCCCTGGTAGTAGATTTTTGATGATAAAATTTCACAGCag
aaaaaaaagtcttgaaatacAAAGTACATAGGTGAAAAGTAATCTTATAG
CAAGAATTCATCTTTtactgaaatttatttttgaattcctccTCATACAG
TGAGAGCTCTAGAAATATTAGTTGGAAATCTCTTTTAAATTTCTTTGGAA
TTTATTTTAACTTGATGTCAATTTGCAAAACCTATTTGAGAtctaaaatg
caaaaatttagtTCAGCACAAAATTACTTCCCATGGATAAAAAACTNgac
ccccccggctattaggtacccgagagtagttagAATAGATTGCACAATCA
GTCTTTGAATTTGCAAAAACGTGTTTTTACATGAACCAACAATTAACGAT
GCAATACGACATGGATCAATGGAATCTAGCTCTATTAATTTTGTTGAGAT
AGCATTTTCAATGCTTACAAAATTATCATCAGTATCAGAACTTTTTTCAT
CAAACTTTAGCTTTTTATTAGGTGCTGGTCTCCTAGACGGCGATGACACA
ATATCTGTTGGTTTGAGACACCTCTTAGTTGAAGTGAGATTTTGTTCGTT
aaatttttggcattttgttCTGAAAATAAAGGCTCTTTCAAGAGAGGTTT
CACAGACAGTACAAATTTTGTCAGGTAATTCATCATCACTTTTTANTACT
TTCTAGACGACATTGCTGTTAAAACTTTCACAAGGAATGGAAAGTTatta
aaaaattcttcaaaaataacATTCATTTGTGTTGTTGCTATAGAATCAAA
ATCCTTGTTGTAGAGATAAGATCCATTTCCTGAACGCTTACATAAATGAT
TGagcttactctcgggtacctaatagccgtccccccccccgctaattaat
ttttcgaaaattttccacccaggacattcttattccaacccccccNCTCT
TTCAAGAGAGGTTTCACAGACAGTACAAATTTTGTCAGGTAATTCATCAT
CACTTTTTACAACAACACCACAACATTGCTCAATTTTGAATTCTAGATTC
TTTTCGTGCTGtcctattttggaaaaaatcttttgataccGTGACTTTGT
TGTCTCTCCACATAATCTACAACCATCTTTGCTATTTGGATCTGCACTTC
TTGCATATGTCTTGGTTGGCGTATCTTTTTTCACAGCCACAGATGCCATC
CACAAAACATAAATTCAAAACTACATATTAATATTCAATTATTTGATCTG
tacttattcaaattttttaaacaatgaattaacttctttcttttcttgCT
TGTCTTGACACACAGAGAGTTGAATTTAAACTGAGCTGGCAACTGATGTG
TTCCTTCATTTTGTATAACTTACTGGACAATAGATGTGTAAATGGATATT
TGCAAAATAAGAACTATTTCTGGCTCAAATCTAAAAAAAGGACAGGGGGT
TGGGACTCTACAGCTGAAGTTTTGAGAACTGAATGCAAACATTTGTGGCT
AAAAANTatgtttagaaacatgtaagaaacatttaaggctcaaaaggccg
atttcttaagaaacattgaggctgcttggtaaaactagtttcttaaaaaa
aaacgtgtataaccTTCCAACaataagttttagctttcggtgattagTTA
TAGTGATGaaatagttatttttcttataagcaacaaTTTTACCAGAAAAT
GATATATACTTTTTCAACCACTACGTTTTAAATCATCTTTATCAGAAAga
aatccaaaacttttgaacaaACAATATATTGACATTTGGTGATTAGTTCT
TTCAAAGCAGTCATGCGCAGTCGTGGAGTTGTGTTTCTaatggaaatatt
tatttttgttataaaggTCAGCTTTCCTTTAACAAGGAAGAATTAGCTTT
TAGTGATCAGTTCTTTCAAAGAAAGCATGaaaatacttatttttcttata
agcaccaactttatcagaaaaaaatccataacttttgaactaaaaTTAAT
TAGCAGTTGGTGATTgattctttcaaagcaaacatgaaattgtgcttatt
atgaaaatatatttttttttataaccatcaactttatcagaaaaaaatcc
ataacttttgaactaacAATAATTAACCTTTGGTGATTAATTCTTTCAAA
GCAGTCATGGAATTGTGTTTGAaatggaaatatttatttttctgataagc
atcgtttttataagaaaatgatttttatctTTCCAACCACTACGTGTAAG
CTTTTGGTGAATGGTACTTTCAAACAGTCATAAAATGGCGCCTAAAATGG
AAACATTTATCTTTGTTATAAGCATCAGCTTTacaagaaaatgatctata
acttttcaaccaataagttttagctttcagcgattggttctttcaaaaca
aacatgaaACTGTGCTTATAatggaaatgtttatttttcttataagcatc
aactttatcagaaaaaaatccaaaacttttgacctAACAATAATTAGCTT
TTGGTGATTGGTTATTTCAAAGCAATTATGGAATTGCGCCtaatattgaa
atatttatttttctagtaAGCATCAGTTTTATCAGAAAAAATCCATAACT
TNACATGAAATTGTGCCtattatgaaaataaatatttttttataaccatc
aactttatcagaaaaaaatccataacttttgaactaacAATAATTAACCT
TTGGTGATTAATTCTTTCAGAGCAGTCATGGAATTGTGTTTGAaatggaa
atatttatttttcttgtaagcaccatctttataagaaaatgatatataac
ttttcaaccagcaagttttagctttcggtgattagTTCTTTCAAAGAAAT
CATGGAATTGTGTTTAAaatggaaatatttatttttctgataagcatcgt
ttttataagaaaatgatttttatctTTCCAACCACTACGTGTAAGCTTTT
GGTGAATGGTACTTTCAAACAGTCATAAAATGGCGCCTAAAATGGAAACA
TTTATCTTTGTTATAAGCATCAGCTTTacaagaaaatgatctataacttt
tcaaccaataagttttagctttcagcgattggttctttcaaaacaaacat
gaaACTGTGCTTATAatggaaatgtttatttttcttataagcatcaactt
tatcagaaaaaaatccaaaacttttgacctAACAATAATTAGCTTTTGGT
GATTGGTTATTTCAAAGCAATTATGGAATTGCGCCtaatattgaaatatt
tatttttcttataagcatcaactttatcagaaaaaaatccaaaacttttg
acctAACAATAATTAGCTTTTGGTGATTGGTTATTTCAAAGCAATTATGG
AATTGCGCCtaatattgaaatatttatttttctagtaAGCATCAGTTTTA
TCAGAAaaaatccataacttttgaccTAACAATAATTAGCTtttggtgat
tggttctttcaaaggaaacatgAAATGGCGcctaatatggaaatatttat
ttttcttataagcatcaactttatcaGAAAGAAATCCATATCTTTTGAAC
TAACAATAATTAGCATTTGGTTGGTTGCTTATTTCAAAGCAGTCATGAAA
AGACGCCTAAaatggaaatatttatttttctcataagcacCAACTTCATA
AAAATAAGATCTATAACTGTTGAACCAATAAGTTTTAACTTTCaatgatt
ggttctttcaaagcaatcaTGGAATTCtgtttaaaatgaaaacatttatt
tttcttgtaagcatcagTTTTATAAGATAACGATCTATAACtattcaacc
actaagttttagctttcaacgattggttctttcaaagcaaacatgaaatt
tttcttgtaatggaaatgtttatttttgttataagcatcaATTTTATAAG
ataatgatctataacttttcaaccactaaggtttagctttcggtgattag
TTCTTTCATAGCAAACATGAAAATGCCCCTAATATTAAAATATATATTct
tcttataagcatcagctTTATAAGGGATCAGTGACATATTGTTACAACTT
TGACACCAATTTTGCACCTTATATCCAATTTAGTGAATCGAGAAATCAAA
TACACgacaaaaattcaagaaaatggtaaaagcaaaatttagtACTGGCG
AAACAAGTTTGTCGGAAAATATTTATATACTCTTTTAGATAAAAATAGGA
AACCAAGCAGCCTGGTTAATAACCAAGGTGATTCAAATGTAAATACATCC
ATGCGagttaaaaggaaaattatttacatgttgtttttataagaatagac
tatataagaacataaggcttcgatggccaaaatattaagaacaagttaag
aacattttatggctttgaggactctaaaatacccaatttcttaggaaaat
ggacaaaaatgctcaaaaacggaaaataagaacacttttaagaacatttt
taggcttaaaactcaaaaaattaggagcatccgaaggcttcaaaaatttc
ggaTGCTCTTACAAAAAAACCGTGTATTTGTCCTTCAATTTTATTAAGAA
TCTTTTTTCGCTATTATTAACGGCTAAGGAGCTTATAACCGTTAGATCGT
AATTAATTGATAACTTAAACCAgaacatttaatgaaaatttctttttatc
atttatcGCATGAGAATTCCGTGTGTTTTCTTTCAGCCCGGCGTTACCGC
AAGGTTATGCTATAGTCCCTGGGtcgtttttttagttttgttttgttttt
cctgTCTTTCCtgtcattctttttttgcaGTCATTTTATAGtttattgca
tttttgtttTATGCTTTATTTTAGTCAATGAGTTATATATAAGAtctatt
tttatctatttttataaaaaaaatttcatctgaaaaaaaaaatttagtat
agaagaaaaaaaattaattgataagttaccgtattacttcgaataaaagt
cccccttcttttaaacacccccttaaataaacgcccccttcgaataaTCG
CCTGTTTAGGAGAGGGGCGTTcattagaaacttgtgactttaatacttca
atCCCAGTGTTAACtgggtttgaaaaggaaaattttagtcatttattgta
accagagcagtttCCGATGCAATTTTAGACGTTGAACCCCCTACAAAAGT
CCAAAAATGCTTGGGGTTAAAAAAGGGTACTTTTGGTTATTGTTATGTTC
CCTTTGCATTTTAGGGTTGACCCTGGCGAGAACCAAGTGAAACCctgcga
gtgggaatcaaaACCTCAGTCACCTGTGTAGCATCCAAGGttaatgacta
ctggtactataCCACAAGCGACATAACATACCAAAACGACACATCGCACC
TATAGCAAATGGTATGAAACTATTATATATAtacatatatatatttttgt
ttattctttATTTGACATTGGTGATGGAAAATAGTTACAAGTACTAATGA
AATCGAACATGACACTCGAATATTTACTACGTATATAGTCAATAATAATT
ATAAAGAGAGTTTGCATGAACAATAGATTTTAGCcttgatgattttgatt
ttaaactcATCTAAAGAATCAATAGTTTTAAATTCCAAAGATAGCCTATT
CCAAGCTTGTCCAGCTCGGAAATTAAAAGCAAACTGTGTTCTTGGGATGT
GGAAGAGTGGAAGTTTAAAGGGGAATCAATATGtttgattttcaatgaaa
cttatGATTATATTCTTAAAGAGTTCATTAACacgattccaaaaatatat
aattaaTAGTTGTTTACTCTATCTATACCGAATAATAGACAATTTAAAAT
TCCCTGATATCACCATGGCAACAAAATTTGTGACGTATAATGCGCGTGAG
TaggtttttagattttcaaaaaaagagagaaatgaAAGAGAGCAAAGAGA
GAGGagtatttttagatttttatgtgAAAAGAGTTTTCTGAGATTGTGAA
AAGTACGAAAAAACATGTCTGGATCCAGTGATTCTTCGTCTACATACAGT
AGCTCTAACGAGTATTCTAATAATTATGATTCTTACGAAAAACTCTTTTC
AAGCTTCTTCTCTTTtttactacacgttttttttaaataagaacaaaata
tataagaacataaggcttcgaggcccaaaaatctaagaacattctaagaa
catactaaggctttggagacttaaaaacatgcaatttctTAAGAAATTAC
ATCAAAATGCTCAAAAAATGTTGAAAATAAGAACATTTgaagaacatttt
taggcatcaaatccaaaaaactaagaacatccgaaggcttcgaaaacttt
tgacgttcttataaaaaaaaacgtgtactgcaGACTTTTAAGACATTATG
TTTATTCATCTGCGTAACCTACGTCACAAAATAGAGGGAGGGTGTAATTT
TCTCCTTCTCAGAGCCGAAAAAAATCAATCTTTAAAGCTAAATGATTAAG
TAAATAAACAAGATTTTTATGGTTGAGTATCTGTAGCAAtattcatcaaa
aaaatatggacagtaaaatatgaaattataGGCAGTAAATGACAAAAATA
TGTTCATCGGGCATGCCCGAcgaataaaaatttttattgacgaATAAAAT
TATGTTCATCGGGTATGCCCGGGCATAATTCTAAAGTTTAATGTTCCGGT
CCTTAAATTTGCTTCTATACGGTCCTCAAAATTACAAGCTGTGAATTACC
GGTctgcattttattttttctgggACCCACGCAataaaatgacccacgca
aaaatattgacccacgcacccacgcacgcacgcaacccacgcaatttagc
agactcgttcGAATATTATCTTTAAAGAAACTGACATTtgcaggaactaa
ttttagcgttttttcGGCGTGTGTAcggcgaaaattagtttccgcgaaat
GCAAATTTTACCTAGTCaagaactattgcaaattaggataaATGCGAGTA
TTTAGCCTAAATAGGACAGATTATTCTAACTAGGATAAAATCTATATCCT
AATTAATTAGgagaaaaggaagaaaaacttgatttattGAATAAACTTTG
AGATCCGCGTCGAGATTTGCATgaatttgagtaatttagagcgAGCAAAG
GATGCTTGAGAATTTTTATCTCCCAGTCAGCGTGCGTTCAgaagttattc
aatttttaagaagtACTTTATAAACTTCAAATGTTAAGCATCGAACTTTG
TTAGTGATAACTTTGctaatgttgatttttttaaagaacattttcaaata
GAAGAGATCTTTATAAACTTAAACAAAATAAGATATAACACAGCGTTATG
TACATTTGTTTCAAGTAGAAAGAACACTTTTGACACTTTCATTCACTCAa
ctcagaggaatgtaaagagatggaaaaacagcttcttgaaaacaatggaa
aagcggctcgtcatataccaggtcgcttgcccttaagggagtttatgtcg
agtaaataggtttcttttgttgtcgctataaaaattctgcataattagcg
tgttgtgacaaaattcttttgtttcaagactggttatgcgcaaactttta
gggcttatattttagGTACatctctcctatacgaaaaggtacctataaat
atcttcttgctcagaatttcctagcaattctactgatataaccgcatcat
gaccgcaccataatatggaaagctagagctcgagaaaattataacttcat
cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtt
tactcgacttctgacagttttacaagaaccaatttaatatcattgcgtta
agaatttcttttgctatacattggtaaaaatattgctccttattcttaaa
aattgttctagtaatcggcaaaaaaggaaaaacaaattttcatttttatc
gtcaaatcatgtagaaaccgtccgatttgtatggcgagctgtcttttctg
gactttcatttaatgacctaatcaacgtttttacaaaagaattttcaata
gaagtgatcgttgaactttgagtaatcagaaaagctgtttttccatctcc
tTACATTCCTCTGCTCAACTCAACAAGCTTGTTTTAaagatctttatttt
ttatgacggGAAAAGCGCGTAACACATTCCTCCTAATTAGGCTATTTTAT
CTTAGttgtggaactaattttcgcgggaattaattttagcgtttttcgcg
gttttttgtcaaaatcgcgaaaatttgagcccgcgaaaaattttgagaga
taaaaaccgcgaaaattaattcccgcgaaatacaattttttccaatttta
tatCATTCTTccaatattttagtttgaatttaataaattatcctaactag
gataaaTATTCTAGCCTATTTAGGATAAAAAGCCTAAttaggataattta
tcctagtttgcaatagtcCTTTGACTGTTGAACAAAGCTTGAAAACTTTA
TCCTCTCAGAAACTTGTTCGTTGAGCCTCAAAAGAATTAAAGGTTTTGAA
TTCCGACCATTTAACAAAACATTTATCATTATGATGACATCAATCTGCCT
CGAGATATAGGTCGTGTTCACACCGCAGACCTTCCTTAATtaaaatgtag
ttaggagaatccTTTTTTGACTACAATACAaaacgtgcatttaacaaaga
gtcgaacgcgtagtattgtaacttttaatagatcttccttaattaaaagt
cgtaagctctattgtcttaaaggtagggtagaggcttcccttaaaacaaa
agattttattaaggaagatACATTAACATGAACCAAAGGAGCGTTTCGTG
CAATTAAGTATATTTCAGCAAAACAGAAAAGAtaagaaaagagagaaaaa
atgtaaaaattgaaTTGCTATGAATCCGTGTTGTTGATGCGTGAGGACGA
TTAATCTCAAAACTTCCAAGAAAATGGAGTACTTACATGAGATTATCAAT
TAAAAACGACCAATCAGAAggcttaagcaaaatcaattatcTGTTACCAA
AGGATTTCGTGAAGCTACAAAGAACTGTGATAAACCAGTGTATTTATtta
tcataaatctctttgtttgttGTTAATGGATTTAATTAAGGAAAGGTCTG
CAGTGTGAACACGACCATAGTTtcatcatagtataagaaagccgcggctg
gaatgatgacgctattgtttttgtcgtaaatggatgttctatctgtgtct
ccgtggtttataagaactaagtcgaaggtaacaaaatccttaaccttaaa
agtgtttataatattcaattgaagaacaaCTACTTTTCAAGTCTCAAATT
TTTCCCACTATCCTCTCTTATTACCTTATTTGAAGTATAAttttataaat
tccaaataaatttttataaatttaggaccaaataacacacattttattaa
aagaactattttccaaatgttaaactttgaatgcttgctgtcacctcaat
actgttgtttttcgaatggaattttcacagaatgcagcttgaatatttat
ttactaatacctgtaataatttttcagaataatcaGGAAGCCATTTCAAg
gcactcaattttcttcaagttcttaaagcactgacattctgacgttctag
tacttttaaaccaagagtcttttcttttactttgatgtTATGAATGCTTG
AATTATCAAGAGATTTGCGTTCATGAGCAAAATTACGTCTAACGAAGTag
ttttttaaaagtcaaattaaattgacaatAGAAATTGTCACCgaaccata
aaaaaattcgttcttacgacatagatagaacaacagaaattcagctgtac
tcattccagccgcggctttcttatactatggtttcATTTTCAGACTTGGC
TTGATTTTCTTGATCACTTCCAATGACAACAGGCCAACACACctctaaaa
tttttattttcttcaattaAACGGAGAGAAGGGGGTGTTcttacagaccc
actgggaacccttcccactggaaaatttagccaaaatatcgtccccgggt
ggaaaattatcctccaatttttgtccccactgaaaataatcaaattaacc
AATCCTCATCCTCACTgagttttctgacttgaaaacaaaagaattgaaat
ccccggacataaaaaatatggtaatatcaatccccatcgattgtcagtcc
gttatttttatccccaatggctgaaaaaatcctaccgggtctgtaagAAG
GGGGTGTGAAAAGCAATAAAGCCTTTACTACTAAAATTATACCTGGAATT
TGATATCTATcgttttacaaatttgaaaatggaacAAATGTTTTTATATA
CAGTAGAAAGCAAAAACAGGAGTCGAGCTTATAGTTTTTTACTTGTTTTA
TCATTCTAAACTCTTTTATTCAGAGGTTGTTGCCATGACATTAACGATCG
CTGCTCTAGTCACCGTCATCCAATTCTGGTTAAGACTTGCCACCTTCCTT
CATGGACCTCTAAAATCATTTCTACTTCATGTACTCCATAACCTCTCAAA
TGACCCTACATACAATGGTCTACCTCAAGACCCTCAAAAACTTTATCTAG
AACTTTCGACACCTGCCAATCGAAAGACGATAAATGACTTGAAGAATGGA
AAAAAcggaaaaaagaaagttttacaaCAAGATCAGGTGGACGCATTACT
GCCTCCTACTGTAAACGCAACCGACTCTTCTCAATTTGATGTGACGCTCA
TCTGTATTTTGATTATCAATTTTACCGATCTTCCTGCTCCTCTCAAAGGA
TGGAAAAACAAAAATCCACCTACAACTGACTTGAGTATCGGTGCATTTGT
AATTCGTGCAAGAGAATGGCGAAACTACATTCACCACACGGATCCAgata
aaatcaatcaaacagAATTTAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035383XLOC_035383Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056196-exon-scaffold_269-1491911889:89477..89611TCONS_00056196-exon-scaffold_269-1491911889:89477..89611Clytia hemisphaericaexon
TCONS_00056196-exon-scaffold_269-1510915933:89477..89611TCONS_00056196-exon-scaffold_269-1510915933:89477..89611Clytia hemisphaericaexon
TCONS_00056196-exon-scaffold_269-1575043694:89477..89611TCONS_00056196-exon-scaffold_269-1575043694:89477..89611Clytia hemisphaericaexon
TCONS_00056196-exon-scaffold_269-1491911889:96941..97087TCONS_00056196-exon-scaffold_269-1491911889:96941..97087Clytia hemisphaericaexon
TCONS_00056196-exon-scaffold_269-1510915933:96941..97087TCONS_00056196-exon-scaffold_269-1510915933:96941..97087Clytia hemisphaericaexon
TCONS_00056196-exon-scaffold_269-1575043694:96941..97087TCONS_00056196-exon-scaffold_269-1575043694:96941..97087Clytia hemisphaericaexon
TCONS_00056196-exon-scaffold_269-1491911889:102200..102699TCONS_00056196-exon-scaffold_269-1491911889:102200..102699Clytia hemisphaericaexon
TCONS_00056196-exon-scaffold_269-1510915933:102200..102699TCONS_00056196-exon-scaffold_269-1510915933:102200..102699Clytia hemisphaericaexon
TCONS_00056196-exon-scaffold_269-1575043694:102200..102699TCONS_00056196-exon-scaffold_269-1575043694:102200..102699Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_269supercontigscaffold_269:89477..102699 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	4.03269	2.11699	0.100793	0	0	0	0.217731	0.262459	0	0	0	0	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056196 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top