Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056214 ID=TCONS_00056214|Name=TCONS_00056214|organism=Clytia hemisphaerica|type=transcript|length=332bp CGCCTAGTAATTATTATAGCAAAACATGGCCGATTCTTCAGCATTCACAG GCTTTTATTAAATCTGGAAAGATCTCATCCATCCAATGGTTTTCGTCGAC AGGTTCATCACCGAAATGGTATTGATACACGAGTTTCGAGTTAAATCCTG TCTCGATTTCATTCCCAAAAGATAATTAAGTGAACAAACCGAACAGTATC CGTGCGGCTAGTATTTATAACGTCCTCTTTATTTTACATTTAACATAATA TGTGGGTGTGCAGTGTAAACGACTTTAAGTAGAAAAAGTTTTAGCGAATA TAAAATTGCCAATTTCCGATAGGAGAATACCC Run BLAST on NCBI transcript from alignment at scaffold_269:303234..303770- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056214 ID=TCONS_00056214|Name=TCONS_00056214|organism=Clytia hemisphaerica|type=transcript|length=537bp|location=Sequence derived from alignment at scaffold_269:303234..303770- (Clytia hemisphaerica) CGCCTAGTAATTATTATAGCAAAACATGGCCGATTCTTCAGCATTCACAG
GTTGAAGTTTCGTCTGTCTCTGACGAATTTCTGTGTCAAAATTCAGCATA
ACTCACCAAATGTTCAAGTTCAAGAGTATGTGCTTAATTTGCTGTGGAAA
ATCAATTTTTTCTTTGGCCACTGTAATTATTATAGTTGGCGTAGTCAATT
CTGTTTGATTCAGAAAATTAGCCAGTCACCCCTGACGACCAAATCCGTTG
CTAAGGCTTTTATTAAATCTGGAAAGATCTCATCCATCCAATGGTTTTCG
TCGACAGGTTCATCACCGAAATGGTATTGATACACGAGTTTCGAGTTAAA
TCCTGTCTCGATTTCATTCCCAAAAGATAATTAAGTGAACAAACCGAACA
GTATCCGTGCGGCTAGTATTTATAACGTCCTCTTTATTTTACATTTAACA
TAATATGTGGGTGTGCAGTGTAAACGACTTTAAGTAGAAAAAGTTTTAGC
GAATATAAAATTGCCAATTTCCGATAGGAGAATACCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00056214-exon-scaffold_269-1575043694:303721..303770 | TCONS_00056214-exon-scaffold_269-1575043694:303721..303770 | Clytia hemisphaerica | exon |
TCONS_00056214-exon-scaffold_269-1575043694:303234..303515 | TCONS_00056214-exon-scaffold_269-1575043694:303234..303515 | Clytia hemisphaerica | exon |
TCONS_00056214-exon-scaffold_269-1510915933:303721..303770 | TCONS_00056214-exon-scaffold_269-1510915933:303721..303770 | Clytia hemisphaerica | exon |
TCONS_00056214-exon-scaffold_269-1510915933:303234..303515 | TCONS_00056214-exon-scaffold_269-1510915933:303234..303515 | Clytia hemisphaerica | exon |
TCONS_00056214-exon-scaffold_269-1491911889:303721..303770 | TCONS_00056214-exon-scaffold_269-1491911889:303721..303770 | Clytia hemisphaerica | exon |
TCONS_00056214-exon-scaffold_269-1491911889:303234..303515 | TCONS_00056214-exon-scaffold_269-1491911889:303234..303515 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_269 | supercontig | scaffold_269:303234..303770 - |
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056214 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 ( blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match Name | E-value | Identity | Description | |
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