Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056236 ID=TCONS_00056236|Name=TCONS_00056236|organism=Clytia hemisphaerica|type=transcript|length=934bp CCTTGGTGTAAGCTGTTTCTGTTCCGCTCCAGCAGATTTCGTTAAATTTG AAACGCTACTTACCGGGTGCCGTATCTTTTTTGGAGGATATACGAGGGCC TAATACAACAGGCCCAAACATGACCTGGTTTACTTTCTCCTAAGCTAAAA TAATTGCATTTTCATTGATTACACAACCTTCAAAAGAGCATGTTGAACAT TAAAAAGGATTAAAAAGGACATAATCGTCAAAGATACCCAAACGTCTCTG TCAAAGTTTTATCGATTGGTGGTAGACAAAGAGGAAGTTCAAAAATGGAA TGAACTGTTAAACCTTGGTTGTTCGAGTCcccattcaaaaattttgttca attttgtGGCAGATTCGTTCCTGACTCAAATCCTTTGCCATTATGGGTCA CAAGCAGAACTTGAGTCATTGGACATGGAGAAACTAAATCTTTCCAAGGA CGAGGAACAAACACCGTATTATGTTGCTGGCTATCTTGTATTTTCATTGA AGCAAAATTTGCGCACTTCCACCTCCGAACCAGACCCATTGGTTGCCCTC TTAGATAGCTGGGGCTCAAGACAAAATTGCTCTTTGATGCAGCCCTTCCG GAAGAAGATTCGTCGTTTTCAGATTTGCAAACTGTCTCATCTCTTCAAAA GAAACCAGCCTCCATCAATACAAAAAGTACAACATCTCACgaatcaacaa aatcaaacaaagctTTCGTCTCCTATCCAAAAAGATCAAACAATGTCAGA AGAATATATGTTACCTTTTAAGAAGAAATCGTCTTCAAATGAAAATAGTA CGTTTCCTTTTCCACTTGAGCCATCTTTATTAATTACATCTGCTGCATCT CCTTTAGAAAGCAAAGCAACTCGGCCAATTAATTCTTTTTCATCGACCCA ACAAGAACAATCCCATCATAGTGCTGCACCTAAA Run BLAST on NCBI protein sequence of TCONS_00056236-protein >TCONS_00056236-protein ID=TCONS_00056236-protein|Name=TCONS_00056236-protein|organism=Clytia hemisphaerica|type=polypeptide|length=170bp
MEKLNLSKDEEQTPYYVAGYLVFSLKQNLRTSTSEPDPLVALLDSWGSRQ NCSLMQPFRKKIRRFQICKLSHLFKRNQPPSIQKVQHLTNQQNQTKLSSP IQKDQTMSEEYMLPFKKKSSSNENSTFPFPLEPSLLITSAASPLESKATR PINSFSSTQQEQSHHSAAPK Run BLAST on NCBI transcript from alignment at scaffold_269:194667..195600 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056236 ID=TCONS_00056236|Name=TCONS_00056236|organism=Clytia hemisphaerica|type=transcript|length=934bp|location=Sequence derived from alignment at scaffold_269:194667..195600 (Clytia hemisphaerica) TTTAGGTGCAGCACTATGATGGGATTGTTCTTGTTGGGTCGATGAAAAAG
AATTAATTGGCCGAGTTGCTTTGCTTTCTAAAGGAGATGCAGCAGATGTA
ATTAATAAAGATGGCTCAAGTGGAAAAGGAAACGTACTATTTTCATTTGA
AGACGATTTCTTCTTAAAAGGTAACATATATTCTTCTGACATTGTTTGAT
CTTTTTGGATAGGAGACGAAagctttgtttgattttgttgattcGTGAGA
TGTTGTACTTTTTGTATTGATGGAGGCTGGTTTCTTTTGAAGAGATGAGA
CAGTTTGCAAATCTGAAAACGACGAATCTTCTTCCGGAAGGGCTGCATCA
AAGAGCAATTTTGTCTTGAGCCCCAGCTATCTAAGAGGGCAACCAATGGG
TCTGGTTCGGAGGTGGAAGTGCGCAAATTTTGCTTCAATGAAAATACAAG
ATAGCCAGCAACATAATACGGTGTTTGTTCCTCGTCCTTGGAAAGATTTA
GTTTCTCCATGTCCAATGACTCAAGTTCTGCTTGTGACCCATAATGGCAA
AGGATTTGAGTCAGGAACGAATCTGCCacaaaattgaacaaaatttttga
atgggGACTCGAACAACCAAGGTTTAACAGTTCATTCCATTTTTGAACTT
CCTCTTTGTCTACCACCAATCGATAAAACTTTGACAGAGACGTTTGGGTA
TCTTTGACGATTATGTCCTTTTTAATCCTTTTTAATGTTCAACATGCTCT
TTTGAAGGTTGTGTAATCAATGAAAATGCAATTATTTTAGCTTAGGAGAA
AGTAAACCAGGTCATGTTTGGGCCTGTTGTATTAGGCCCTCGTATATCCT
CCAAAAAAGATACGGCACCCGGTAAGTAGCGTTTCAAATTTAACGAAATC
TGCTGGAGCGGAACAGAAACAGCTTACACCAAGG Coding sequence (CDS) from alignment at scaffold_269:194667..195600 >TCONS_00056236 ID=TCONS_00056236|Name=TCONS_00056236|organism=Clytia hemisphaerica|type=CDS|length=510bp|location=Sequence derived from alignment at scaffold_269:194667..195600 (Clytia hemisphaerica) TTTAGGTGCAGCACTATGATGGGATTGTTCTTGTTGGGTCGATGAAAAAG AATTAATTGGCCGAGTTGCTTTGCTTTCTAAAGGAGATGCAGCAGATGTA ATTAATAAAGATGGCTCAAGTGGAAAAGGAAACGTACTATTTTCATTTGA AGACGATTTCTTCTTAAAAGGTAACATATATTCTTCTGACATTGTTTGAT CTTTTTGGATAGGAGACGAAagctttgtttgattttgttgattcGTGAGA TGTTGTACTTTTTGTATTGATGGAGGCTGGTTTCTTTTGAAGAGATGAGA CAGTTTGCAAATCTGAAAACGACGAATCTTCTTCCGGAAGGGCTGCATCA AAGAGCAATTTTGTCTTGAGCCCCAGCTATCTAAGAGGGCAACCAATGGG TCTGGTTCGGAGGTGGAAGTGCGCAAATTTTGCTTCAATGAAAATACAAG ATAGCCAGCAACATAATACGGTGTTTGTTCCTCGTCCTTGGAAAGATTTA GTTTCTCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00056236-exon-scaffold_269-1491911889:194667..195600 | TCONS_00056236-exon-scaffold_269-1491911889:194667..195600 | Clytia hemisphaerica | exon |
TCONS_00056236-exon-scaffold_269-1510915933:194667..195600 | TCONS_00056236-exon-scaffold_269-1510915933:194667..195600 | Clytia hemisphaerica | exon |
TCONS_00056236-exon-scaffold_269-1575043694:194667..195600 | TCONS_00056236-exon-scaffold_269-1575043694:194667..195600 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_269 | supercontig | scaffold_269:194667..195600 . |
Blast
The following BLAST results are available for this feature:
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