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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056241 ID=TCONS_00056241|Name=TCONS_00056241|organism=Clytia hemisphaerica|type=transcript|length=1325bp
ataacatttatcgctagatttcgaaaaaatgacTGCTCGGAAACAATGAT
ATCACTAAATTCAATCCTTCATTCATTGTCAGCGAAAATTGTTAAGGGAA
CACTTTCTCTTGCCCGGGAAAGATTAAAGATTcacttctagccttcggct
taaATTCAATGTTTTTAGTCTTTTGAGCCTCTGATCCATTTGATAAAAAT
AACGACAAAAATTGTTATCacagaaaaagattttctaagGTGGGTTGGAC
CGCTTGAAACGAAGTTTAGCCCTTTTCTAAGGGGTCTTTATTTTCTCGAA
TGACTTTTAGAAGGGAtgttttaaattcgtttttacCATGTTAATGTTTA
TTCGAGGGTACATTTAGATAAGGGAGGGGTCATAACTCTAGACAATCCAA
GCcggtttcttttgtttatagtTGTGGCTTTTCATTTATTACAAAGGTCC
CTCTGTCTCGTTTCATAACAATGGTAACAATGTCTTCAATAAAATCTAAT
CAAGTTTTGTCCTGTCTAAGCCAATCAGAGTCACCtgtttaaaaattctt
tttgagaaaatttagccAATCGGAACATTTCTTTGATAACTGGCCAACCA
GAgctctttttgattttgtttctattcaaatgaaaatctttctttttgtt
atagAAAGTGACTTTTGTTATCAatacttttcacaaaagaataattttta
aatacgtCTTTTCTGTTTTAAGGTATGTGGAAACCTTCTACACCACACCC
GACTCTTTTATTAATAGCTTTCGATACAGATATATTTCaatagtaaaagt
atatatttttggaaagcttattAAATTCTCTATCGAATGATAGTGACAAA
GGAAAAATGACCATGTCATCTTCAAAGAGTGATAAGTCCCCTTATGTTGG
CAATTTAATAAAGCTTTTTATATGATCATGAtccagaaaaaaagacaaaa
aaaaccTTGCCATGTTTTTTTTCCTAAACGCTTAGTTTTCGAATTAATCg
ataaaacgtcaaaaaacgacaaaaaaacattaaattaatAGCGATTTTTT
GCTTTGAAGGGTCATAACTTTAGTTTAaggcaaaaagaaagaaaaacgtg
GCAATGTTTTTTAGATCTATCTTTCACGAgtacaataaagaaaaaatgaa
gtcagTAGCTCAGAGATAAGGGGACTTATTACTCGTGGAATGACCCTAGG
TATCCCAATTTTCTGTCTTGAGATATCATCGATTTAAGTTTTCCCCTTAA
TCTTTTGTTTGCATAAAGATTAAACAAAACTAttcatcaaacaacaaaag
tTATAAATATGAAGTTTCTGTTCTC Run BLAST on NCBI transcript from alignment at scaffold_269:254458..255782 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056241 ID=TCONS_00056241|Name=TCONS_00056241|organism=Clytia hemisphaerica|type=transcript|length=1325bp|location=Sequence derived from alignment at scaffold_269:254458..255782 (Clytia hemisphaerica)
GAGAACAGAAACTTCATATTTATAacttttgttgtttgatgaaTAGTTTT
GTTTAATCTTTATGCAAACAAAAGATTAAGGGGAAAACTTAAATCGATGA
TATCTCAAGACAGAAAATTGGGATACCTAGGGTCATTCCACGAGTAATAA
GTCCCCTTATCTCTGAGCTActgacttcattttttctttattgtacTCGT
GAAAGATAGATCTAAAAAACATTGCcacgtttttctttctttttgcctTA
AACTAAAGTTATGACCCTTCAAAGCAAAAAATCGCTattaatttaatgtt
tttttgtcgttttttgacgttttatcGATTAATTCGAAAACTAAGCGTTT
AGGAAAAAAAACATGGCAAggttttttttgtctttttttctggaTCATGA
TCATATAAAAAGCTTTATTAAATTGCCAACATAAGGGGACTTATCACTCT
TTGAAGATGACATGGTCATTTTTCCTTTGTCACTATCATTCGATAGAGAA
TTTaataagctttccaaaaatatatacttttactattGAAATATATCTGT
ATCGAAAGCTATTAATAAAAGAGTCGGGTGTGGTGTAGAAGGTTTCCACA
TACCTTAAAACAGAAAAGacgtatttaaaaattattcttttgtgaaaagt
atTGATAACAAAAGTCACTTTctataacaaaaagaaagattttcatttga
atagaaacaaaatcaaaaagagcTCTGGTTGGCCAGTTATCAAAGAAATG
TTCCGATTggctaaattttctcaaaaagaatttttaaacaGGTGACTCTG
ATTGGCTTAGACAGGACAAAACTTGATTAGATTTTATTGAAGACATTGTT
ACCATTGTTATGAAACGAGACAGAGGGACCTTTGTAATAAATGAAAAGCC
ACAactataaacaaaagaaaccgGCTTGGATTGTCTAGAGTTATGACCCC
TCCCTTATCTAAATGTACCCTCGAATAAACATTAACATGgtaaaaacgaa
tttaaaacaTCCCTTCTAAAAGTCATTCGAGAAAATAAAGACCCCTTAGA
AAAGGGCTAAACTTCGTTTCAAGCGGTCCAACCCACcttagaaaatcttt
ttctgtGATAACAATTTTTGTCGTTATTTTTATCAAATGGATCAGAGGCT
CAAAAGACTAAAAACATTGAATttaagccgaaggctagaagtgAATCTTT
AATCTTTCCCGGGCAAGAGAAAGTGTTCCCTTAACAATTTTCGCTGACAA
TGAATGAAGGATTGAATTTAGTGATATCATTGTTTCCGAGCAgtcatttt
ttcgaaatctagcgataaatgttat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056241-exon-scaffold_269-1491911889:254458..255782 | TCONS_00056241-exon-scaffold_269-1491911889:254458..255782 | Clytia hemisphaerica | exon |
| TCONS_00056241-exon-scaffold_269-1510915933:254458..255782 | TCONS_00056241-exon-scaffold_269-1510915933:254458..255782 | Clytia hemisphaerica | exon |
| TCONS_00056241-exon-scaffold_269-1575043694:254458..255782 | TCONS_00056241-exon-scaffold_269-1575043694:254458..255782 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_269 | supercontig | scaffold_269:254458..255782 . |
Blast
The following BLAST results are available for this feature:
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