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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056361 ID=TCONS_00056361|Name=TCONS_00056361|organism=Clytia hemisphaerica|type=transcript|length=290bp
ACAAAATGATCAAAGAGCAAGCTAAGAAGAGATTGTAACCAGTTTAATCC
TGCCACTGAAGATCTGAAAAGCTACTGGGACGGACGTTATCATTCTGGAG
TTGGTGTAATTTCTATGAAACTTCAATTCCAGTACAGaatCATACCAATT
GGATTGAATCGACTGCATACCGTCCTCTGGTGATTCTTCAGATTCGTCAA
TCCTTATGCTGTTGCCAATCCTTGATGGACAACTGCCACTTTCATTCAAT
TTAAGATTATATACCTGAATTCGTGCGAAAATTAGTACCT Run BLAST on NCBI transcript from alignment at scaffold_273:187405..188517- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056361 ID=TCONS_00056361|Name=TCONS_00056361|organism=Clytia hemisphaerica|type=transcript|length=1113bp|location=Sequence derived from alignment at scaffold_273:187405..188517- (Clytia hemisphaerica)
ACAAAATGATCAAAGAGCAAGCTAAGAAGAGATTGTAACCAGTTTAATCC
TGCCACTGAAGGTTAGTTTCCTATTTTCGGTCAGTTGCAGAAGTCACCCC
AAGTTCATTCAATCAACTGATTGGAAGTATGAAAAAGAAAAAAATTGCAT
TGCAGAATGAATATTTTAATTTTCACCACATTCTTGTATTCAGCGAATCT
CCCCAAGACCATTTTTTAGACAAGTTGGTATTGATACCACAATTAGGGGG
TTGACCCCACTTTTGATAATTAAGTAAGCTTAGGTTTGAATATTGTATAT
GGGGTAGGTTCCCTGTTGTTAAATATTTTATTAAATTTCAAGTTGGTATA
TACCTGACATAAGATTTTGCATAACCACGTGTAATAAAGAATATGCTGAG
AACTCAAGCATTTTATTAAAAAATAATATATATTTTGATCAGAGGATTTT
GAAATTGAACAACAACAGGCTCAAATACATATGCTTCATTATATTTTGCA
AATTATGCAGCTGTGTCCCAGGTGTTTGGATGAATATTTCAAATTACAAT
GCGTTATTACAAATGATCTTTTGTTTTTAGATCTGAAAAGCTACTGGGAC
GGACGTTATCATTCTGGAGTTGGTGTAATTTCTATGAAACTTCAATTCCA
GTACAGGTAAGATGATACTTAAATTAGAATCTAGATTTCAGGATTGCTGA
TAAATTTTACGATTTTATTTCAGGTTAGTGCTGACTCCATAGGCTCTATG
ACAGGGCTGTATTACAATCTTCTCATCCTTCCATCGCCACTAAAACCTCT
GCGATCCTGAAAACATTTCAGTGGTATCACTTTAGGGAAAGAGCGTGATA
TTTAAGCAAAAGAAATGTAGACATGCTGTGAAATTTCATTTTGTTTTTAG
AATCATACCAATTGGATTNTAGAAACGTAGACATGCTGTGAAATTTCATT
TTGTTTTTAGAATCATACCAATTGGATTGAATCGACTGCATACCGTCCTC
TGGTGATTCTTCAGATTCGTCAATCCTTATGCTGTTGCCAATCCTTGATG
GACAACTGCCACTTTCATTCAATTTAAGATTATATACCTGAATTCGTGCG
AAAATTAGTACCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056361-exon-scaffold_273-1575043694:188457..188517 | TCONS_00056361-exon-scaffold_273-1575043694:188457..188517 | Clytia hemisphaerica | exon |
| TCONS_00056361-exon-scaffold_273-1575043694:187862..187937 | TCONS_00056361-exon-scaffold_273-1575043694:187862..187937 | Clytia hemisphaerica | exon |
| TCONS_00056361-exon-scaffold_273-1575043694:187405..187557 | TCONS_00056361-exon-scaffold_273-1575043694:187405..187557 | Clytia hemisphaerica | exon |
| TCONS_00056361-exon-scaffold_273-1510915933:188457..188517 | TCONS_00056361-exon-scaffold_273-1510915933:188457..188517 | Clytia hemisphaerica | exon |
| TCONS_00056361-exon-scaffold_273-1510915933:187862..187937 | TCONS_00056361-exon-scaffold_273-1510915933:187862..187937 | Clytia hemisphaerica | exon |
| TCONS_00056361-exon-scaffold_273-1510915933:187405..187557 | TCONS_00056361-exon-scaffold_273-1510915933:187405..187557 | Clytia hemisphaerica | exon |
| TCONS_00056361-exon-scaffold_273-1491911889:188457..188517 | TCONS_00056361-exon-scaffold_273-1491911889:188457..188517 | Clytia hemisphaerica | exon |
| TCONS_00056361-exon-scaffold_273-1491911889:187862..187937 | TCONS_00056361-exon-scaffold_273-1491911889:187862..187937 | Clytia hemisphaerica | exon |
| TCONS_00056361-exon-scaffold_273-1491911889:187405..187557 | TCONS_00056361-exon-scaffold_273-1491911889:187405..187557 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_273 | supercontig | scaffold_273:187405..188517 - |
Blast
The following BLAST results are available for this feature:
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