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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056393 ID=TCONS_00056393|Name=TCONS_00056393|organism=Clytia hemisphaerica|type=transcript|length=3207bp cctttttatgGCTGATCAGTACAGGGTCAGAAGAGCAGAAATAAATAAAG TATTTGTATAtatatttcaactttgatttgatgtcatttttgtaaaaaaa acctTGGCAATttcaaaagtcagaaaataaagCGCTGTTCCATTCCTTTT TTTCCTATGTTATTctacattattttttcaaaccaGTTGTCATTAATGAA CCGTTActttttttcagttaaaaaaaaagcaaacatgCTTCCAAGAAGAT CATTGACATCAGTGTTCAATCAAAAAACATTGTCTACGATGGTTCGGAGA TGTCTTTCTTCATACAAGATGCTTGATATTGAAACAACCGATAAAGAATA CTACATTATGAATTTGAACCGCAAACCTGTCAATAGCATGAACTATGAAC TACTCAAAGAGATGAATCAAGCCATTAAAGAATTAGAAGCCGATAAAAAG TGTCGTGGAGTTGTTATTTCCTCAAAGCTACCCGTCTTCAGTGCTGGTTT AGATTTGTTTGAAATGTATGACCCCAACGTGGAACGAATGACTGCCTTCT GGCGTGAGTTGCAGGATATGAAAATAAACTATTTTGGATCTCCCCTAGTA ATGGTTGGTGCTATCAATGGGGCATGTCCCGCTGGCGGATGTGCCATAGC GTTCAGCTGTGATTACCGCATAATGGCAGATGGGAAACATACTATTGGGT TAAATGAGACCAAAATAGGTCTCGCTGCCCCATACTGGTTAGCAGAGTCA ATGAAATTGTTGACTGGTCACCGTGAAGCAGAGCGTTTGCTTGCCTTGTC TATTCTAATGAAGCCTGGAGAAGCTTTGGAAAAAGGGGTGGTTGATGAAG TGTTACCTCTTGAAAATGTTTTGGAGCGTGGTAAAGAAGTCATGGAGGAA TGGCTTCAAATTCCAGATGTTGGACGAGCACAAACCAAAAAACAGTTCAG GAAATATTTTCTTGAAGAGCTAGAAGAAAGACGTGATGAAGATTTGGAAC GTTTCATTAAAGGGGTGACGTCACCACAGCTCCAAAAATTACTTGGTTTT TATATCCAGCAgttgaaaaaaaagtgaatttaggTTGAAATTTGTATGGA CTTTTCTTTTCACCTTACCTTATAAATggatatttgagaaaatagggaac acgttttatttttacttattaGTTTTCTATAGAATTTTAAGTGGTTAATc tttataaaaatttctaattataATTATGCATTAATTCATTCAAAGATAAC ATTCTGCAATATGCTGTACAAAAGTTTTCACCATTAAGCTTGTTACGtac attattattattgatGAAATATGTACCTTTTTGGTACCTGATTAGCCCTA ATGGTGCATCTCATATTTGCGGCTAGATATAATTTattgaatcaaaataa aattaaaataaaactctttttattctttcagtgaacaaaaaaattaagaa ttggAAGAGATTAAAAATATAATGTCAGTGAATTATGCAGCTGGTTTGAG CAATTTTCCACATATTCACAAAGGAAGAGTTGGTTTACCTGAGATCTTTG ACGAGCCGGATGTTTTAGACGAAAAAATCACTGAACTAGTTAACTTGATC AAAACGTCCGAATACATTGTCTTCCATACTGGAGCAGGGATTTCTACCAC AGCAGGAATTCCAGATTTTCGAGGTCCAAAAGGTGTGTGGACACTGGAAT CTAAAGGCCTATCACCACAAGTAAATATagattttgacgAGGCGATTCCT ACTAAAACACATCGTGCGATTCTAGCATTACAAAAACTCGGCATTGTAAA GTACGTTGTCAGTCAAAACATCGATGGATTGCATTTACGTTCAGGCTACC CAAGATGTCAACTGTCCGAATTACACGGCAATATGTTTGTCGAGAAGTGT GAGAAATGCGGACATGAGTATTACCGGAGAAGCCCTGTCTCTACCATGAC ACAAAAGAGGACAGGCAACCTTTGTTTACAGAAAGGAAAACGCGGCTTAA CTAATTGCAGAGGAAAGCTGAGAGATACAATATTGGATTGGGAAGACAGT CTACCTTATGGTGATTTGGAAAACGCAGAGAAACATTCAAAAAAGGCTGA TTTATCAATATGTTTGGGGACCACATTACAAATCGTGCCAAGTGGGAAAC TCCCTTTGTTCACGTTGAAAAACAAAGGAGGAAAAATGGTTATCGTCAAT TTACAGAAAACTAAATACGATAAAAAGGCGGACATTCTGATTCATTCGTA TGTAGATGACGTCATGGTAGGTGTAATGAAAGGACTGGGACTAGAAATCC CTGAATACAATAAAGAACTTTATTTGAGTATCACCACAAGATTCCctgat gaaaaattgaaaattgaaccgaAAGAAGAACAAAAGGGAATGACAGAAAC GGAAGAACGTATTGGCCAATTAGATTCGAGTATAAAAACTGAACAAAAAT CAGATTTGATTAATGAAACAACAGAAGAAATTTTAAACCGCTCAAATTTA GGTCATATTTCCATTCACCAGTTATCAGAAAACGGTGTTAAAAAGTTGAA CGGAAACTCATCGAATTCGAAAAGAACTTTACCTGATGAAAAGTTAAATG AAGGACTGACAAAGCACGTCAAGTTAGAGGAGAAagatttctaatatttt ttaaaatattttcatatcactTTCTATAATCTTCATTTCATTTTACGcat ttttaaaggattttactGTAGTATTATATATCATCATATATATCGTTATT TATTTCTTAGGTTATACAACAAAATTATTCATATTTTGCTAGACAAGCAT GGATAAATTTCAAGACCCCAAACAATCTTTATGGACACTGATATATTAGA ACTGACGGTCAAGATAGGATCAACCAGTTGACTGGGTATACCATGCATAA AAAGTCTCAAacttttacttatttatttacaaTAGAAATTTCTATGTTAC AAAAAACCTTCTCGTATGAATAAGCCCAATTTTAGGTCCATATTACGTCA TCAAGGGCCCTCGTTAAAAGCTCTCCAATTTTAAAATGTTGGCATGGTGT AGATTTTGCACGCCTTGTGTTGCAGTTTTGGCACTTTCTTCTATTAGTTT CTTCTACAggaaaaaagtaaatatttatTATGATAGCATATTTTTAGtgt agaaatatttttggatcACGGTTTTCATTctgttttcaagaattttagaA ATTAACT Run BLAST on NCBI protein sequence of TCONS_00056393-protein >TCONS_00056393-protein ID=TCONS_00056393-protein|Name=TCONS_00056393-protein|organism=Clytia hemisphaerica|type=polypeptide|length=390bp
MSVNYAAGLSNFPHIHKGRVGLPEIFDEPDVLDEKITELVNLIKTSEYIV FHTGAGISTTAGIPDFRGPKGVWTLESKGLSPQVNIDFDEAIPTKTHRAI LALQKLGIVKYVVSQNIDGLHLRSGYPRCQLSELHGNMFVEKCEKCGHEY YRRSPVSTMTQKRTGNLCLQKGKRGLTNCRGKLRDTILDWEDSLPYGDLE NAEKHSKKADLSICLGTTLQIVPSGKLPLFTLKNKGGKMVIVNLQKTKYD KKADILIHSYVDDVMVGVMKGLGLEIPEYNKELYLSITTRFPDEKLKIEP KEEQKGMTETEERIGQLDSSIKTEQKSDLINETTEEILNRSNLGHISIHQ LSENGVKKLNGNSSNSKRTLPDEKLNEGLTKHVKLEEKDF Run BLAST on NCBI transcript from alignment at scaffold_275:85775..92759- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056393 ID=TCONS_00056393|Name=TCONS_00056393|organism=Clytia hemisphaerica|type=transcript|length=6985bp|location=Sequence derived from alignment at scaffold_275:85775..92759- (Clytia hemisphaerica) CCTTTTTATGGCTGATCAGTACAGGGTCAGAAGAGCAGAAATAAATAAAG
TATTTGTATATATATTTCAACTTTGATTTGATGTCATTTTTGTAAAAAAA
ACCTTGGCAATTTCAAAAGTCAGAAAATAAAGCGCTGTTCCATTCCTTTT
TTTCCTATGTTATTCTACATTATTTTTTCAAACCAGTTGTCATTAATGAA
CCGTTACTTTTTTTCAGTTAAAAAAAAAGCAAACATGCTTCCAAGAAGAT
CATTGACATCAGTGTTCAATCAAAAAACATTGTCTACGATGGTTCGGAGA
TGTCTTTCTTCATACAAGATGCTTGATATTGAAACAACCGATAAAGAATA
CTACATTATGAATTTGAACCGCAAACCTGTCAATAGCATGAACTATGAAC
TACTCAAAGAGATGAATCAAGCCATTAAAGAATTAGAAGCCGATAAAAAG
TGTCGTGGAGTTGTTATTTCCTCAAAGCTACCCGTCTTCAGTGCTGGTTT
AGATTTGTTTGAAATGTATGACCCCAACGTGGAACGAATGACTGCCTTCT
GGCGTGAGTTGCAGGATATGAAAATAAACTATTTTGGATCTCCCCTAGTA
ATGGTTGGTGCTATCAATGGGGCATGTCCCGCTGGCGGATGTGCCATAGC
GTTCAGCTGTGATTACCGCATAATGGCAGATGGGAAACATACTATTGGGT
TAAATGAGACCAAAATAGGTCTCGCTGCCCCATACTGGTTAGCAGAGTCA
ATGAAATTGTTGACTGGTCACCGTGAAGCAGAGCGTTTGCTTGCCTTGTC
TATTCTAATGAAGCCTGGAGAAGCTTTGGAAAAAGGGGTGGTTGATGAAG
TGTTACCTCTTGAAAATGTTTTGGAGCGTGGTAAAGAAGTCATGGAGGAA
TGGCTTCAAATTCCAGATGTTGGACGAGCACAAACCAAAAAACAGTTCAG
GAAATATTTTCTTGAAGAGCTAGAAGAAAGACGTGATGAAGATTTGGAAC
GTTTCATTAAAGGGGTGACGTCACCACAGCTCCAAAAATTACTTGGTTTT
TATATCCAGCAGTTGAAAAAAAAGTGAATTTAGGTTGAAATTTGTATGGA
CTTTTCTTTTCACCTTACCTTATAAATGGATATTTGAGAAAATAGGGAAC
ACGTTTTATTTTTACTTATTAGTTTTCTATAGAATTTTAAGTGGTTAATC
TTTATAAAAATTTCTAATTATAATTATGCATTAATTCATTCAAAGATAAC
ATTCTGCAATATGCTGTACAAAAGTTTTCACCATTAAGCTTGTTACGTAC
ATTATTATTATTGATGAAATATGTACCTTTTTGGTACCTGATTAGCCCTA
ATGGTGCATCTCATATTTGCGGCTAGATATAATTTATTGAATCAAAATAA
AATTAAAATAAAACTCTTTTTATTCTTTCAGTGAACAAAAAAATTAAGAA
TTGGAAGAGATTAAAAATATAATGTCAGTGAATTATGCAGCTGGTTTGAG
CAATTTTCCACATATTCACAAAGGAAGAGTTGGTTTACCTGAGGTAAGTA
GCCTATTTTTTTGTTGATTGAGGCCAGGGATTTGATTTAATGGTTAGTAG
GAAAAGACGACATATTAATGTGAATTCGATGACCCAATAATATTTTTAAT
TATTAATACCATGATATTTCGGTCCTAAAAAAATTAGTCAAGACAAGGCG
TACTTCTCAAGACCCTTAGGCAGAGATCACTGCACAGGCAGAAAGATTAG
TTACTCAAGTGCATATCCTGATAATCTTGATAATCCTGAATATCCTTGAA
ATATAAAACACGTGAATGTTTCATTGGCTCACATCGTCTCTTAGATTAGT
CTGACACCCAAAAACTTTAAATAATAATTTTATAATTCATATCTCCATTT
ACATTATTTTCGTAGATCTTTGACGAGCCGGATGTTTTAGACGAAAAAAT
CACTGAACTAGTTAACTTGATCAAAACGTCCGAATACATTGTCTTCCATA
CTGGAGCAGGGATTTCTACCACAGCAGGAATTCCAGATTTTCGAGGTCCA
AAAGGTGTGTGGACACTGGAATCTAAAGGCCTATCACCACAAGTAAATAT
AGGTATTTTGTTTTGTTTATATCATATTTTCTTCTAATAATGGATCTTTT
CTTATGAATTGGTTACACGCAACTCCAATTTTGGGGTCAGTGCTGGGGTT
GCTAATCATTCTAGACCATTTTCTGGAAAATTTGCTTTGACTACCTCTGA
TATACAATAGCGAGTTTATGTATTTGCACTTTTGAGGACGGTAAAGTGAC
TGAAGCGATTTGGAAAAACCCGCACTTCTGTCCCGCAAAATCGAAGATGG
TAAAAGTGCTGATTTACCGTCGTCCTCAGTTGGTCATGATCTAGTCAAAT
TAGAACCTTACCGTCTCCGTCCCTGAAAAGCACACATACATAAGCTTGGT
AATATTTATACTTCTCGGGTCAAGAGCTACCGTCTTCCATGGTTTGATTA
TCTAGTATAGGTTTTACTTTACCAGATAGTGAAAAATAGGCTACTTCGAG
GACTCGAACCTTAGCAACCTGCATCGATACTTTTGTAAGAGAACTTTTAC
CTAAATGATGTTTTGAGTACGAAATGTTGTAATAAAAACAAAACTCATTT
CGTTGTCTTTCATATATTGAGAAGTTAAAATAAACCTTTCCGGACTTTCT
TTCATACATATTAATAGTTACCAACCTGGCTACCTTGTTTTTTTCGTTAG
CCACTTAGTGATCTTGAAATCATTTATTTTTCCAAAAGCAACATCATTAT
AGAGATTCGCTGTACAAAACGAAGTCCATTCTGAAAAGATTTCGGCTCCT
ATTATGAATCCTTTCTGGTAAAGTTTAACTGGTTGTACCGTATTCTTACT
GTTAGATTATTGTCATTGATCGCCATTAAATTACCTTAAGCTATGGGTAA
CTTTCATCACCTCCAATCAGCAGACTTTCTGCTAGAACTAAAACGAGTCA
TGCTGTGACTTATTTACCTTAATAATAAATTGAGGACCAGAAAATGTTGT
GGTCTGGAGGTGATTAAAGTTACCCCTAGTTAATGACGGTAACCCCCATT
GACGGTATCAAAAAAAACATTAAAGAATTTTCAATTGACTATATTTACCT
TAATTTTTATCTTGCCCATTTTCAGATTTTGACGAGGCGATTCCTACTAA
AACACATCGTGCGATTCTAGCATTACAAAAACTCGGCATTGTAAAGTACG
TTGTCAGTCAAAACATCGATGGATTGCATTTACGTTCAGGCTACCCAAGG
TAATTTTAGAAGTCGACTATTTTTTTATTTCTCTTGATTCTGCAGCTGCA
AAAGATGTGAGAAAACGATATTCTTAAAATGCACAAGATAATTGCTATCA
AAATATTGTTGCCAATATACTGCAACGCCGTCAGATATATCTTAAGAAGT
GTGAGGAATGAAAAGCGTGTATCGGTGTTGATTTTAGTCAGAAATCCCTT
ACTTTTTTTGCTAAGATTTAATAAGTTCAAACTTAAGTCATAGTCTCCAA
AACAAAGAATCTTCAATTTCGTTTTTAGATGTCAACTGTCCGAATTACAC
GGCAATATGTTTGTCGAGAAGTGTGAGAAATGCGGACATGAGTATTACCG
GAGAAGCCCTGTCTCTACCATGACACAAAAGAGGACAGGCAACCTTTGTT
TACAGAAAGGAAAACGCGGCTTAACTAATTGCAGGTACATTTCTTTTTTA
GCCTGCACCAAACTCTTCCTCGCAGCGGGAAGATTTTTTCAATTTACGAA
AAATTACACTACTTGGGGGCCCCGGTACAAGCTATTTCTTTAGTAGAATG
TCTTTTGGACCTACTCCGGTGGAGGTGCTATAAATTAACCGTCGTTCGTT
CGTTCGTTCGTCTGTTACCGACTTTTCTCAGGATTGGATCATAGAAATCT
TTTGATTTTCGCTACAACGGTGCAAAATGGTAGTGGCCAAATGTGACGAA
ACCCGATTTTCGAAAAAAAAAATTTTTTGGGCAAATTTCAGCCAAGACGG
TTAAAGAAAGGACTTTGTGAAAAATTTGGTCATTAAATCTTTCTGATTTT
TTGCATTAAAGTTGGGTAACATCATTGGTAAAAGATGGCTGAAGCAGATT
TTCATAAAAATATTTTTTCGGTTCAAAAAACGAATCTTTATCTACAAGAA
TCGCTATTTATAAGCATAGATCAATATTCTTAGCGATATTATTTTTATTA
GTTTTTTTTAAGATGAAAATGTCACAGTGGAGGGCAATGGTTTGAGTTTT
CTAGAAACATATCTTTTTTTTTTGCCTGAAAAACGAATCTTTTTCTATAA
GAATCACTAGGTCAAAGTTCTTAGCCAAATAATTATTTTCATTATAATTT
TTTCTAATAGAAGAAAATGTCAAAGTAGAGTGCAATGGTTTTAGTTTTCT
AAAAACCTTATTTATTAAGATGTGCATTTTTCTGATAGTGGATTTTATAA
AAAAAAGCGTTGAATAGCTTTTTTATTTCTTTTTCAAAAGTCTTTTTCAA
TAGTGTTGATAGTTTCCCCCAATAGATATGCTTGCCAAATTTTTTGAACA
GTTATGTCTTTTGAGTTTCATTGTTTCAATGTTCATTGATTAGTTTTGAT
AACCAGTTAGGTCCATCAAAGTATCACTTGTTTACTTGTAAATTCAATAT
ATACAGAGATTGTACTCAAAATAAGCCTATTTTTGATTACAGGAAATTTG
CCCCTTACGCCCATTAATTTTGACCGGATACCAGTTACCAGCTTTCATTC
AAGCTTCTAATATTTTCCTATTTATAGAGGAAAGCTGAGAGATACAATAT
TGGATTGGGAAGACAGTCTACCTTATGGTGATTTGGAAAACGCAGAGAAA
CATTCAAAGTAAGTCATGTTTAAAGGGATAGTCAAATTGTTTGGGATATT
TGACGAGTGGATTTTTACTATCGCACTGAGCAAGACCTCCAAATATTCTT
GCCTAACTATTCTCAAAAGTCGAGATATTCAAGCCACAAGTCTTGACTGT
TATTAAGAAAACAAAAGAATTTCAACGCAAGAAACGTGTAAGGGCTCAAT
TTTAGAAATTTCAAGTTGTGATATCTTGACTTTGGAAAAAAGTTAGACAC
AAAAATAATTGGGGTGTTACTCAGTATGACATGAGGTTTCGGCAGCCCTA
ATATCTCAAAATATTTGACTATCCCTTTCAAGTTAACCATTTCTCTTATC
ATTGCGAGTTGGTGTGTCACATACAAAGGATTGACACACGGGCAAATCTT
CGTTACGTTGATTGAATTTTTTTTCAATTTCACCGTACAAAAACAAAAGC
CAAAGGATAAAAATTAAAAACATTCTGTTCATTTTTCACATTTAGAAAGG
CTGATTTATCAATATGTTTGGGGACCACATTACAAATCGTGCCAAGTGGG
AAACTCCCTTTGTTCACGTTGAAAAACAAAGGAGGAAAAATGGTTATCGT
CAATTTACAGAAAACTAAATACGTAGGTTGAATGTTTATAACATTATCTT
TTAAGTGAAGGAAATGGAAGTTTATGGGTCATTTGTTGGATCCTCTCTCA
GTATAACCATATCACTTGTCTGTACACAAACCCAGTATCTGTGGCTTATT
TCAAAATTCATTGCCGTAGATGGTCTGTTGTCATTGTCTTTTCTCATTTT
TCAAACCAAAAGTCTAACTTCATCCCAGAGGTCTCCGTACGGGAATTTTT
TCACCCAAACAGACAATGCGCACAGAGTGTACTACGAAGCGAGAAACGTG
AGATACATTCTGGTACCATATCACGGGTATCACGGGCGTCTTTAGCGTTT
TTTAAGTCGTGCTGTTCTCCCCCCCCCCTCCTCGATTTTTCCCCGGCATT
TCTCGTAGTTAGCACAAGCTAACGCACCTCGTCTGGGTTTAATGTTTAAT
AGATTAAAAAGAAGCAAGTTAAAGAAAAATAACAATTCATTTTCAGGATA
AAAAGGCGGACATTCTGATTCATTCGTATGTAGATGACGTCATGGTAGGT
GTAATGAAAGGACTGGGACTAGAAATCCCTGAATACAATAAAGAACTTTA
TTTGAGTATCACCACAAGATTCCCTGATGAAAAATTGAAAATTGAACCGA
AAGAAGAACAAAAGGGAATGACAGAAACGGAAGAACGTATTGGCCAATTA
GATTCGAGTATAAAAACTGAACAAAAATCAGATTTGATTAATGAAACAAC
AGAAGAAATTTTAAACCGCTCAAATTTAGGTCATATTTCCATTCACCAGT
TATCAGAAAACGGTGTTAAAAAGTTGAACGGAAACTCATCGAATTCGAAA
AGAACTTTACCTGATGAAAAGTTAAATGAAGGACTGACAAAGCACGTCAA
GTTAGAGGAGAAAGATTTCTAATATTTTTTAAAATATTTTCATATCACTT
TCTATAATCTTCATTTCATTTTACGCATTTTTAAAGGATTTTACTGTAGT
ATTATATATCATCATATATATCGTTATTTATTTCTTAGGTTATACAACAA
AATTATTCATATTTTGCTAGACAAGCATGGATAAATTTCAAGACCCCAAA
CAATCTTTATGGACACTGATATATTAGAACTGACGGTCAAGATAGGATCA
ACCAGTTGACTGGGTATACCATGCATAAAAAGTCTCAAACTTTTACTTAT
TTATTTACAATAGAAATTTCTATGTTACAAAAAACCTTCTCGTATGAATA
AGCCCAATTTTAGGTCCATATTACGTCATCAAGGGCCCTCGTTAAAAGCT
CTCCAATTTTAAAATGTTGGCATGGTGTAGATTTTGCACGCCTTGTGTTG
CAGTTTTGGCACTTTCTTCTATTAGTTTCTTCTACAGGAAAAAAGTAAAT
ATTTATTATGATAGCATATTTTTAGTGTAGAAATATTTTTGGATCACGGT
TTTCATTCTGTTTTCAAGAATTTTAGAAATTAACT Coding sequence (CDS) from alignment at scaffold_275:85775..92759- >TCONS_00056393 ID=TCONS_00056393|Name=TCONS_00056393|organism=Clytia hemisphaerica|type=CDS|length=8211bp|location=Sequence derived from alignment at scaffold_275:85775..92759- (Clytia hemisphaerica) GATAAAAAGGCGGACATTCTGATTCATTCGTATGTAGATGACGTCATGGT AGGTGTAATGAAAGGACTGGGACTAGAAATCCCTGAATACAATAAAGAAC TTTATTTGAGTATCACCACAAGATTCCCTGATGAAAAATTGAAAATTGAA CCGAAAGAAGAACAAAAGGGAATGACAGAAACGGAAGAACGTATTGGCCA ATTAGATTCGAGTATAAAAACTGAACAAAAATCAGATTTGATTAATGAAA CAACAGAAGAAATTTTAAACCGCTCAAATTTAGGTCATATTTCCATTCAC CAGTTATCAGAAAACGGTGTTAAAAAGTTGAACGGAAACTCATCGAATTC GAAAAGAACTTTACCTGATGAAAAGTTAAATGAAGGACTGACAAAGCACG TCAAGTTAGAGGAGAAAGATTTCTAAAAAGGCTGATTTATCAATATGTTT GGGGACCACATTACAAATCGTGCCAAGTGGGAAACTCCCTTTGTTCACGT TGAAAAACAAAGGAGGAAAAATGGTTATCGTCAATTTACAGAAAACTAAA TACAGGAAAGCTGAGAGATACAATATTGGATTGGGAAGACAGTCTACCTT ATGGTGATTTGGAAAACGCAGAGAAACATTCAAAATGTCAACTGTCCGAA TTACACGGCAATATGTTTGTCGAGAAGTGTGAGAAATGCGGACATGAGTA TTACCGGAGAAGCCCTGTCTCTACCATGACACAAAAGAGGACAGGCAACC TTTGTTTACAGAAAGGAAAACGCGGCTTAACTAATTGCAGATTTTGACGA GGCGATTCCTACTAAAACACATCGTGCGATTCTAGCATTACAAAAACTCG GCATTGTAAAGTACGTTGTCAGTCAAAACATCGATGGATTGCATTTACGT TCAGGCTACCCAAGATCTTTGACGAGCCGGATGTTTTAGACGAAAAAATC ACTGAACTAGTTAACTTGATCAAAACGTCCGAATACATTGTCTTCCATAC TGGAGCAGGGATTTCTACCACAGCAGGAATTCCAGATTTTCGAGGTCCAA AAGGTGTGTGGACACTGGAATCTAAAGGCCTATCACCACAAGTAAATATA GATGTCAGTGAATTATGCAGCTGGTTTGAGCAATTTTCCACATATTCACA AAGGAAGAGTTGGTTTACCTGAGGATAAAAAGGCGGACATTCTGATTCAT TCGTATGTAGATGACGTCATGGTAGGTGTAATGAAAGGACTGGGACTAGA AATCCCTGAATACAATAAAGAACTTTATTTGAGTATCACCACAAGATTCC CTGATGAAAAATTGAAAATTGAACCGAAAGAAGAACAAAAGGGAATGACA GAAACGGAAGAACGTATTGGCCAATTAGATTCGAGTATAAAAACTGAACA AAAATCAGATTTGATTAATGAAACAACAGAAGAAATTTTAAACCGCTCAA ATTTAGGTCATATTTCCATTCACCAGTTATCAGAAAACGGTGTTAAAAAG TTGAACGGAAACTCATCGAATTCGAAAAGAACTTTACCTGATGAAAAGTT AAATGAAGGACTGACAAAGCACGTCAAGTTAGAGGAGAAAGATTTCTAAA AAGGCTGATTTATCAATATGTTTGGGGACCACATTACAAATCGTGCCAAG TGGGAAACTCCCTTTGTTCACGTTGAAAAACAAAGGAGGAAAAATGGTTA TCGTCAATTTACAGAAAACTAAATACAGGAAAGCTGAGAGATACAATATT GGATTGGGAAGACAGTCTACCTTATGGTGATTTGGAAAACGCAGAGAAAC ATTCAAAATGTCAACTGTCCGAATTACACGGCAATATGTTTGTCGAGAAG TGTGAGAAATGCGGACATGAGTATTACCGGAGAAGCCCTGTCTCTACCAT GACACAAAAGAGGACAGGCAACCTTTGTTTACAGAAAGGAAAACGCGGCT TAACTAATTGCAGATTTTGACGAGGCGATTCCTACTAAAACACATCGTGC GATTCTAGCATTACAAAAACTCGGCATTGTAAAGTACGTTGTCAGTCAAA ACATCGATGGATTGCATTTACGTTCAGGCTACCCAAGATCTTTGACGAGC CGGATGTTTTAGACGAAAAAATCACTGAACTAGTTAACTTGATCAAAACG TCCGAATACATTGTCTTCCATACTGGAGCAGGGATTTCTACCACAGCAGG AATTCCAGATTTTCGAGGTCCAAAAGGTGTGTGGACACTGGAATCTAAAG GCCTATCACCACAAGTAAATATAGATGTCAGTGAATTATGCAGCTGGTTT GAGCAATTTTCCACATATTCACAAAGGAAGAGTTGGTTTACCTGAGGATA AAAAGGCGGACATTCTGATTCATTCGTATGTAGATGACGTCATGGTAGGT GTAATGAAAGGACTGGGACTAGAAATCCCTGAATACAATAAAGAACTTTA TTTGAGTATCACCACAAGATTCCCTGATGAAAAATTGAAAATTGAACCGA AAGAAGAACAAAAGGGAATGACAGAAACGGAAGAACGTATTGGCCAATTA GATTCGAGTATAAAAACTGAACAAAAATCAGATTTGATTAATGAAACAAC AGAAGAAATTTTAAACCGCTCAAATTTAGGTCATATTTCCATTCACCAGT TATCAGAAAACGGTGTTAAAAAGTTGAACGGAAACTCATCGAATTCGAAA AGAACTTTACCTGATGAAAAGTTAAATGAAGGACTGACAAAGCACGTCAA GTTAGAGGAGAAAGATTTCTAAAAAGGCTGATTTATCAATATGTTTGGGG ACCACATTACAAATCGTGCCAAGTGGGAAACTCCCTTTGTTCACGTTGAA AAACAAAGGAGGAAAAATGGTTATCGTCAATTTACAGAAAACTAAATACA GGAAAGCTGAGAGATACAATATTGGATTGGGAAGACAGTCTACCTTATGG TGATTTGGAAAACGCAGAGAAACATTCAAAATGTCAACTGTCCGAATTAC ACGGCAATATGTTTGTCGAGAAGTGTGAGAAATGCGGACATGAGTATTAC CGGAGAAGCCCTGTCTCTACCATGACACAAAAGAGGACAGGCAACCTTTG TTTACAGAAAGGAAAACGCGGCTTAACTAATTGCAGATTTTGACGAGGCG ATTCCTACTAAAACACATCGTGCGATTCTAGCATTACAAAAACTCGGCAT TGTAAAGTACGTTGTCAGTCAAAACATCGATGGATTGCATTTACGTTCAG GCTACCCAAGATCTTTGACGAGCCGGATGTTTTAGACGAAAAAATCACTG AACTAGTTAACTTGATCAAAACGTCCGAATACATTGTCTTCCATACTGGA GCAGGGATTTCTACCACAGCAGGAATTCCAGATTTTCGAGGTCCAAAAGG TGTGTGGACACTGGAATCTAAAGGCCTATCACCACAAGTAAATATAGATG TCAGTGAATTATGCAGCTGGTTTGAGCAATTTTCCACATATTCACAAAGG AAGAGTTGGTTTACCTGAGGATAAAAAGGCGGACATTCTGATTCATTCGT ATGTAGATGACGTCATGGTAGGTGTAATGAAAGGACTGGGACTAGAAATC CCTGAATACAATAAAGAACTTTATTTGAGTATCACCACAAGATTCCCTGA TGAAAAATTGAAAATTGAACCGAAAGAAGAACAAAAGGGAATGACAGAAA CGGAAGAACGTATTGGCCAATTAGATTCGAGTATAAAAACTGAACAAAAA TCAGATTTGATTAATGAAACAACAGAAGAAATTTTAAACCGCTCAAATTT AGGTCATATTTCCATTCACCAGTTATCAGAAAACGGTGTTAAAAAGTTGA ACGGAAACTCATCGAATTCGAAAAGAACTTTACCTGATGAAAAGTTAAAT GAAGGACTGACAAAGCACGTCAAGTTAGAGGAGAAAGATTTCTAAAAAGG CTGATTTATCAATATGTTTGGGGACCACATTACAAATCGTGCCAAGTGGG AAACTCCCTTTGTTCACGTTGAAAAACAAAGGAGGAAAAATGGTTATCGT CAATTTACAGAAAACTAAATACAGGAAAGCTGAGAGATACAATATTGGAT TGGGAAGACAGTCTACCTTATGGTGATTTGGAAAACGCAGAGAAACATTC AAAATGTCAACTGTCCGAATTACACGGCAATATGTTTGTCGAGAAGTGTG AGAAATGCGGACATGAGTATTACCGGAGAAGCCCTGTCTCTACCATGACA CAAAAGAGGACAGGCAACCTTTGTTTACAGAAAGGAAAACGCGGCTTAAC TAATTGCAGATTTTGACGAGGCGATTCCTACTAAAACACATCGTGCGATT CTAGCATTACAAAAACTCGGCATTGTAAAGTACGTTGTCAGTCAAAACAT CGATGGATTGCATTTACGTTCAGGCTACCCAAGATCTTTGACGAGCCGGA TGTTTTAGACGAAAAAATCACTGAACTAGTTAACTTGATCAAAACGTCCG AATACATTGTCTTCCATACTGGAGCAGGGATTTCTACCACAGCAGGAATT CCAGATTTTCGAGGTCCAAAAGGTGTGTGGACACTGGAATCTAAAGGCCT ATCACCACAAGTAAATATAGATGTCAGTGAATTATGCAGCTGGTTTGAGC AATTTTCCACATATTCACAAAGGAAGAGTTGGTTTACCTGAGGATAAAAA GGCGGACATTCTGATTCATTCGTATGTAGATGACGTCATGGTAGGTGTAA TGAAAGGACTGGGACTAGAAATCCCTGAATACAATAAAGAACTTTATTTG AGTATCACCACAAGATTCCCTGATGAAAAATTGAAAATTGAACCGAAAGA AGAACAAAAGGGAATGACAGAAACGGAAGAACGTATTGGCCAATTAGATT CGAGTATAAAAACTGAACAAAAATCAGATTTGATTAATGAAACAACAGAA GAAATTTTAAACCGCTCAAATTTAGGTCATATTTCCATTCACCAGTTATC AGAAAACGGTGTTAAAAAGTTGAACGGAAACTCATCGAATTCGAAAAGAA CTTTACCTGATGAAAAGTTAAATGAAGGACTGACAAAGCACGTCAAGTTA GAGGAGAAAGATTTCTAAAAAGGCTGATTTATCAATATGTTTGGGGACCA CATTACAAATCGTGCCAAGTGGGAAACTCCCTTTGTTCACGTTGAAAAAC AAAGGAGGAAAAATGGTTATCGTCAATTTACAGAAAACTAAATACAGGAA AGCTGAGAGATACAATATTGGATTGGGAAGACAGTCTACCTTATGGTGAT TTGGAAAACGCAGAGAAACATTCAAAATGTCAACTGTCCGAATTACACGG CAATATGTTTGTCGAGAAGTGTGAGAAATGCGGACATGAGTATTACCGGA GAAGCCCTGTCTCTACCATGACACAAAAGAGGACAGGCAACCTTTGTTTA CAGAAAGGAAAACGCGGCTTAACTAATTGCAGATTTTGACGAGGCGATTC CTACTAAAACACATCGTGCGATTCTAGCATTACAAAAACTCGGCATTGTA AAGTACGTTGTCAGTCAAAACATCGATGGATTGCATTTACGTTCAGGCTA CCCAAGATCTTTGACGAGCCGGATGTTTTAGACGAAAAAATCACTGAACT AGTTAACTTGATCAAAACGTCCGAATACATTGTCTTCCATACTGGAGCAG GGATTTCTACCACAGCAGGAATTCCAGATTTTCGAGGTCCAAAAGGTGTG TGGACACTGGAATCTAAAGGCCTATCACCACAAGTAAATATAGATGTCAG TGAATTATGCAGCTGGTTTGAGCAATTTTCCACATATTCACAAAGGAAGA GTTGGTTTACCTGAGGATAAAAAGGCGGACATTCTGATTCATTCGTATGT AGATGACGTCATGGTAGGTGTAATGAAAGGACTGGGACTAGAAATCCCTG AATACAATAAAGAACTTTATTTGAGTATCACCACAAGATTCCCTGATGAA AAATTGAAAATTGAACCGAAAGAAGAACAAAAGGGAATGACAGAAACGGA AGAACGTATTGGCCAATTAGATTCGAGTATAAAAACTGAACAAAAATCAG ATTTGATTAATGAAACAACAGAAGAAATTTTAAACCGCTCAAATTTAGGT CATATTTCCATTCACCAGTTATCAGAAAACGGTGTTAAAAAGTTGAACGG AAACTCATCGAATTCGAAAAGAACTTTACCTGATGAAAAGTTAAATGAAG GACTGACAAAGCACGTCAAGTTAGAGGAGAAAGATTTCTAAAAAGGCTGA TTTATCAATATGTTTGGGGACCACATTACAAATCGTGCCAAGTGGGAAAC TCCCTTTGTTCACGTTGAAAAACAAAGGAGGAAAAATGGTTATCGTCAAT TTACAGAAAACTAAATACAGGAAAGCTGAGAGATACAATATTGGATTGGG AAGACAGTCTACCTTATGGTGATTTGGAAAACGCAGAGAAACATTCAAAA TGTCAACTGTCCGAATTACACGGCAATATGTTTGTCGAGAAGTGTGAGAA ATGCGGACATGAGTATTACCGGAGAAGCCCTGTCTCTACCATGACACAAA AGAGGACAGGCAACCTTTGTTTACAGAAAGGAAAACGCGGCTTAACTAAT TGCAGATTTTGACGAGGCGATTCCTACTAAAACACATCGTGCGATTCTAG CATTACAAAAACTCGGCATTGTAAAGTACGTTGTCAGTCAAAACATCGAT GGATTGCATTTACGTTCAGGCTACCCAAGATCTTTGACGAGCCGGATGTT TTAGACGAAAAAATCACTGAACTAGTTAACTTGATCAAAACGTCCGAATA CATTGTCTTCCATACTGGAGCAGGGATTTCTACCACAGCAGGAATTCCAG ATTTTCGAGGTCCAAAAGGTGTGTGGACACTGGAATCTAAAGGCCTATCA CCACAAGTAAATATAGATGTCAGTGAATTATGCAGCTGGTTTGAGCAATT TTCCACATATTCACAAAGGAAGAGTTGGTTTACCTGAGGATAAAAAGGCG GACATTCTGATTCATTCGTATGTAGATGACGTCATGGTAGGTGTAATGAA AGGACTGGGACTAGAAATCCCTGAATACAATAAAGAACTTTATTTGAGTA TCACCACAAGATTCCCTGATGAAAAATTGAAAATTGAACCGAAAGAAGAA CAAAAGGGAATGACAGAAACGGAAGAACGTATTGGCCAATTAGATTCGAG TATAAAAACTGAACAAAAATCAGATTTGATTAATGAAACAACAGAAGAAA TTTTAAACCGCTCAAATTTAGGTCATATTTCCATTCACCAGTTATCAGAA AACGGTGTTAAAAAGTTGAACGGAAACTCATCGAATTCGAAAAGAACTTT ACCTGATGAAAAGTTAAATGAAGGACTGACAAAGCACGTCAAGTTAGAGG AGAAAGATTTCTAAAAAGGCTGATTTATCAATATGTTTGGGGACCACATT ACAAATCGTGCCAAGTGGGAAACTCCCTTTGTTCACGTTGAAAAACAAAG GAGGAAAAATGGTTATCGTCAATTTACAGAAAACTAAATACAGGAAAGCT GAGAGATACAATATTGGATTGGGAAGACAGTCTACCTTATGGTGATTTGG AAAACGCAGAGAAACATTCAAAATGTCAACTGTCCGAATTACACGGCAAT ATGTTTGTCGAGAAGTGTGAGAAATGCGGACATGAGTATTACCGGAGAAG CCCTGTCTCTACCATGACACAAAAGAGGACAGGCAACCTTTGTTTACAGA AAGGAAAACGCGGCTTAACTAATTGCAGATTTTGACGAGGCGATTCCTAC TAAAACACATCGTGCGATTCTAGCATTACAAAAACTCGGCATTGTAAAGT ACGTTGTCAGTCAAAACATCGATGGATTGCATTTACGTTCAGGCTACCCA AGATCTTTGACGAGCCGGATGTTTTAGACGAAAAAATCACTGAACTAGTT AACTTGATCAAAACGTCCGAATACATTGTCTTCCATACTGGAGCAGGGAT TTCTACCACAGCAGGAATTCCAGATTTTCGAGGTCCAAAAGGTGTGTGGA CACTGGAATCTAAAGGCCTATCACCACAAGTAAATATAGATGTCAGTGAA TTATGCAGCTGGTTTGAGCAATTTTCCACATATTCACAAAGGAAGAGTTG GTTTACCTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00056393-exon-scaffold_275-1575043694:91217..92759 | TCONS_00056393-exon-scaffold_275-1575043694:91217..92759 | Clytia hemisphaerica | exon |
TCONS_00056393-exon-scaffold_275-1575043694:90658..90844 | TCONS_00056393-exon-scaffold_275-1575043694:90658..90844 | Clytia hemisphaerica | exon |
TCONS_00056393-exon-scaffold_275-1575043694:89461..89584 | TCONS_00056393-exon-scaffold_275-1575043694:89461..89584 | Clytia hemisphaerica | exon |
TCONS_00056393-exon-scaffold_275-1575043694:89026..89181 | TCONS_00056393-exon-scaffold_275-1575043694:89026..89181 | Clytia hemisphaerica | exon |
TCONS_00056393-exon-scaffold_275-1575043694:87852..87932 | TCONS_00056393-exon-scaffold_275-1575043694:87852..87932 | Clytia hemisphaerica | exon |
TCONS_00056393-exon-scaffold_275-1575043694:87238..87364 | TCONS_00056393-exon-scaffold_275-1575043694:87238..87364 | Clytia hemisphaerica | exon |
TCONS_00056393-exon-scaffold_275-1575043694:85775..86763 | TCONS_00056393-exon-scaffold_275-1575043694:85775..86763 | Clytia hemisphaerica | exon |
TCONS_00056393-exon-scaffold_275-1510915933:91217..92759 | TCONS_00056393-exon-scaffold_275-1510915933:91217..92759 | Clytia hemisphaerica | exon |
TCONS_00056393-exon-scaffold_275-1510915933:90658..90844 | TCONS_00056393-exon-scaffold_275-1510915933:90658..90844 | Clytia hemisphaerica | exon |
TCONS_00056393-exon-scaffold_275-1510915933:89461..89584 | TCONS_00056393-exon-scaffold_275-1510915933:89461..89584 | Clytia hemisphaerica | exon |
TCONS_00056393-exon-scaffold_275-1510915933:89026..89181 | TCONS_00056393-exon-scaffold_275-1510915933:89026..89181 | Clytia hemisphaerica | exon |
TCONS_00056393-exon-scaffold_275-1510915933:87852..87932 | TCONS_00056393-exon-scaffold_275-1510915933:87852..87932 | Clytia hemisphaerica | exon |
TCONS_00056393-exon-scaffold_275-1510915933:87238..87364 | TCONS_00056393-exon-scaffold_275-1510915933:87238..87364 | Clytia hemisphaerica | exon |
TCONS_00056393-exon-scaffold_275-1510915933:85775..86763 | TCONS_00056393-exon-scaffold_275-1510915933:85775..86763 | Clytia hemisphaerica | exon |
TCONS_00056393-exon-scaffold_275-1491911889:91217..92759 | TCONS_00056393-exon-scaffold_275-1491911889:91217..92759 | Clytia hemisphaerica | exon |
TCONS_00056393-exon-scaffold_275-1491911889:90658..90844 | TCONS_00056393-exon-scaffold_275-1491911889:90658..90844 | Clytia hemisphaerica | exon |
TCONS_00056393-exon-scaffold_275-1491911889:89461..89584 | TCONS_00056393-exon-scaffold_275-1491911889:89461..89584 | Clytia hemisphaerica | exon |
TCONS_00056393-exon-scaffold_275-1491911889:89026..89181 | TCONS_00056393-exon-scaffold_275-1491911889:89026..89181 | Clytia hemisphaerica | exon |
TCONS_00056393-exon-scaffold_275-1491911889:87852..87932 | TCONS_00056393-exon-scaffold_275-1491911889:87852..87932 | Clytia hemisphaerica | exon |
TCONS_00056393-exon-scaffold_275-1491911889:87238..87364 | TCONS_00056393-exon-scaffold_275-1491911889:87238..87364 | Clytia hemisphaerica | exon |
TCONS_00056393-exon-scaffold_275-1491911889:85775..86763 | TCONS_00056393-exon-scaffold_275-1491911889:85775..86763 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_275 | supercontig | scaffold_275:85775..92759 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0070403 | NAD+ binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
molecular_function |
GO:0070403 |
NAD+ binding |
Blast
BLAST of TCONS_00056393 vs. Swiss-Prot (Human)
Match: SIR6 (NAD-dependent protein deacetylase sirtuin-6 OS=Homo sapiens GN=SIRT6 PE=1 SV=2) HSP 1 Score: 356.681 bits (914), Expect = 1.163e-112 Identity = 175/305 (57.38%), Postives = 227/305 (74.43%), Query Frame = 2
Query: 1472 MSVNYAAGLSNFPHIHKGRVGLPEIFDEPDVLDEKITELVNLIKTSEYIVFHTGAGISTTAGIPDFRGPKGVWTLESKGLSPQVNIDFDEAIPTKTHRAILALQKLGIVKYVVSQNIDGLHLRSGYPRCQLSELHGNMFVEKCEKCGHEYYRRSPVSTMTQKRTGNLCLQKGKRGLTNCRGKLRDTILDWEDSLPYGDLENAEKHSKKADLSICLGTTLQIVPSGKLPLFTLKNKGGKMVIVNLQKTKYDKKADILIHSYVDDVMVGVMKGLGLEIPEYN--KELYLSITTRFPDEKLKIEPKEE 2380
MSVNYAAGLS P+ KG+ GLPEIFD P+ L+ K+ EL L+ S +VFHTGAGIST +GIPDFRGP GVWT+E +GL+P+ + F+ A PT+TH A++ L+++G+++++VSQN+DGLH+RSG+PR +L+ELHGNMFVE+C KC +Y R + V TM K TG LC RGL CRG+LRDTILDWEDSLP DL A++ S+ ADLSI LGT+LQI PSG LPL T K +GG++VIVNLQ TK+D+ AD+ IH YVD+VM +MK LGLEIP ++ + L ++ K+EPKEE
Sbjct: 1 MSVNYAAGLS--PYADKGKCGLPEIFDPPEELERKVWELARLVWQSSSVVFHTGAGISTASGIPDFRGPHGVWTMEERGLAPKFDTTFESARPTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGLKATGRLCTVAKARGLRACRGELRDTILDWEDSLPDRDLALADEASRNADLSITLGTSLQIRPSGNLPLAT-KRRGGRLVIVNLQPTKHDRHADLRIHGYVDEVMTRLMKHLGLEIPAWDGPRVLERALPPLPRPPTPKLEPKEE 302
The following BLAST results are available for this feature:
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