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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056482 ID=TCONS_00056482|Name=TCONS_00056482|organism=Clytia hemisphaerica|type=transcript|length=1063bp
TTTGTGGTTTAGGACCGAGTCAAAAATTTAGTATAAAAAGAGCAAAAAGT
TTCCTAGTGAATCATTCACAAAGAAACTAGAATCAAAGAAATCGCAACAA
ACAATATCCAACCATCAAAACAATGGCTTCCGCAGGCGCActtcttttaa
atcaaaaagtcCCATTCATCATGGAGCTAGACGCTGAAGTTAACGGAATC
AGATTCGCAGTCCGTGGCAAGGGAACAGGGGACGCGACAACTGGCACCAT
CGACACCAAATTCGTTTGCACCACTGGTGAATTGCCAGTACCTTGGGCTT
CAATCTTGAGCACGATGTCATATGGAGCTTTATGTTTCGCCAAATATCCA
GACAGcgttaaagattttttcaaatcagCAATGCCAGATGGTTATATCCA
AGAAAGGACCATCAGCTTCGAAAATGATGGCGCATACAAAGTTCGTGGTG
TAGTTACTTACGAACATGGTTCCATTTACAATCGCGTCACACTTAAAGGA
GAAGGTTTCAAAAAAGACGGACTTATCCTTCAAAAACAATACGAATTTTG
TTGTCCGAATAATNTAATCGCGTCACACTTAAAGGAGATGGATTCAAAAA
AGACGGACTCATTCTTCAAAAGCAATACGAGTTTTGCTGTCCGAATAATG
CAGTTTACGTTTTGCCGGACAAAGAAAACAACGGACTCAGAGTTGTTTAT
AATAAGATCTACAAATTGAAAGATGGAGGACATCATTTGGCTGCACACGA
ACAAAAGAATATTCCACTTGGCGGAGGAGTTGTTGATATTCCAAATTATC
ATCATCTTCATATTGGAAACATCTTTTCGAAAGATCTCGAAGAAACACGA
GACCATATGTGTTTGGTTGAAACTGTCAGAGCTGTAAATCTTGAAACATA
TAACTAAAACATTTTATTATTCATTATGCTATTATAGAATTTATCTAGCA
GTCTCGTCATAGTTATTTAGTTAATCTTTCACTCATATGTAACACTTTTT
GGATTTACTGATGGGTTTAATACAGTTTTGAGTGTCATACactctatttt
tcttatttccaaA Run BLAST on NCBI transcript from alignment at scaffold_276:201338..203534- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056482 ID=TCONS_00056482|Name=TCONS_00056482|organism=Clytia hemisphaerica|type=transcript|length=2197bp|location=Sequence derived from alignment at scaffold_276:201338..203534- (Clytia hemisphaerica)
TTTGTGGTTTAGGACCGAGTCAAAAATTTAGTATAAAAAGAGCAAAAAGT
TTCCTAGTGAATCATTCACAAAGAAACTAGAATCAAAGAAATCGCAACAA
ACAATATCCAACCATCAAAACAATGGCTTCCGCAGGCGCACTTCTTTTAA
ATCAAAAAGTCCCATTCATCATGGAGCTAGACGCTGAAGTTAACGGAATC
AGATTCGCAGTCCGTGGCAAGGGAACAGGGGACGCGACAACTGGCACCAT
CGACACCAAATTCGTTTGCACCACTGGTGAATTGCCAGTACCTTGGGCTT
CAATCTTGAGCACGATGTCATATGGAGCTTTGTAAGTAATGCTGTTTTTG
ACAGAATAGCAAGAGGAAGAGCGGTGACCGATTTGTCTAAAGCACTACAA
ACAAAAGTTTTCAGTTCTTTATTCTCGTTCAATTCATAGATAACCAACCC
TGTTGATCGTAGATCTTATGACATCACGATCGAAAACTCTAAAATCTAAA
AATCTCACAATCATGGACAAAAAGTTTGTAGACTTCTGCAATATTTGCAA
AATACTTCAATATCGATCAAAAACAAGTTCCCAAGAGGTTCTGGGTGCTT
TCCAAACCCATCAAATGCTGTCTGTCTATTTCTCATCAATTTTCACTGAA
ATTTCATTTATCTACAACCTTTTGTCCAGCATTGCATATGTAATAAAATA
TCTATCTATCTATCAGTAGCTGTTCATTCGAGTAAGTTATCGAGTAATGT
CACCAATACCATACGGATTTATTGTTTTGTAAGCCTGGCGAGCGCTATGA
TTCCCCTAACCTGGGTAATTATCCCGAGATCCATAACATTGGCATCGAGG
GATGGGGGAAGCTATTCTTCCTTTACAGTTCTATTAACCTATTTCTCCGT
AACTACAGTGATCATCTTTAAAATCAAATTGAGAAGGAAACAGCATGTAA
CAAATGCACGAATCCTATGAAATAGGCGGATTTCTTACTCAATAAGAATT
GTCTTGTGGCCCTTCGTGGAAACAATTTCTCCAGCTGCCTAAAAGCTTTT
GAATTTTCCGATTTTGTTTCACATTTAGATGTTTCGCCAAATATCCAGAC
AGCGTTAAAGATTTTTTCAAATCAGCAATGCCAGATGGTTATATCCAAGA
AAGGACCATCAGCTTCGAAAATGATGGCGCATACAAAGTTCGTGGTGTAG
TTACTTACGAACATGGTTCCATTTACAATCGCGTCACACTTAAAGGAGAA
GGTTTCAAAAAAGACGGACTTATCCTTCAAAAACAATACGAATTTTGTTG
TCCGAATAATNTAATCGCGTCACACTTAAAGGAGATGGATTCAAAAAAGA
CGGACTCATTCTTCAAAAGCAATACGAGTTTTGCTGTCCGAATAATGCAG
TTTACGTTTTGCCGGACAAAGAAAACAACGGACTCAGAGTTGTTTATAAT
AAGGTAAGTTCTTCTAGGAGATATATGTTTTATTGTTTTTGTCGATATTG
AATTCAACAAATAATTCTTGATAGCTTCGAACTATACCCGGACCACTGCC
CTACAGGAAAATTGGACTAAAATTTCATCCACGGGGAAAACATGATTTTG
ATTGAAACTTTTATCCCCACCTGTGGGAAAGATTTCCATCGTGGCCATGA
GACAGGTGTGTACGTATTCCAAAGACAAACCTTTCAGAAATCTACTGTAT
GTAAATTTTTCTCATGTCCTCATGGTGTTTTAGCGGATTCCAGCTTGCAC
CAGTTTTTTCAGTCTTAATCCTTTCCAAATTTTTATGTTCTTTCTTTTCT
GTCGTTCTTATTTATTTTGAATCTTTATCTTTGTTCACAGATCTACAAAT
TGAAAGATGGAGGACATCATTTGGCTGCACACGAACAAAAGAATATTCCA
CTTGGCGGAGGAGTTGTTGATATTCCAAATTATCATCATCTTCATATTGG
AAACATCTTTTCGAAAGATCTCGAAGAAACACGAGACCATATGTGTTTGG
TTGAAACTGTCAGAGCTGTAAATCTTGAAACATATAACTAAAACATTTTA
TTATTCATTATGCTATTATAGAATTTATCTAGCAGTCTCGTCATAGTTAT
TTAGTTAATCTTTCACTCATATGTAACACTTTTTGGATTTACTGATGGGT
TTAATACAGTTTTGAGTGTCATACACTCTATTTTTCTTATTTCCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056482-exon-scaffold_276-1575043694:203204..203534 | TCONS_00056482-exon-scaffold_276-1575043694:203204..203534 | Clytia hemisphaerica | exon |
| TCONS_00056482-exon-scaffold_276-1575043694:202082..202456 | TCONS_00056482-exon-scaffold_276-1575043694:202082..202456 | Clytia hemisphaerica | exon |
| TCONS_00056482-exon-scaffold_276-1575043694:201338..201694 | TCONS_00056482-exon-scaffold_276-1575043694:201338..201694 | Clytia hemisphaerica | exon |
| TCONS_00056482-exon-scaffold_276-1510915933:203204..203534 | TCONS_00056482-exon-scaffold_276-1510915933:203204..203534 | Clytia hemisphaerica | exon |
| TCONS_00056482-exon-scaffold_276-1510915933:202082..202456 | TCONS_00056482-exon-scaffold_276-1510915933:202082..202456 | Clytia hemisphaerica | exon |
| TCONS_00056482-exon-scaffold_276-1510915933:201338..201694 | TCONS_00056482-exon-scaffold_276-1510915933:201338..201694 | Clytia hemisphaerica | exon |
| TCONS_00056482-exon-scaffold_276-1491911889:203204..203534 | TCONS_00056482-exon-scaffold_276-1491911889:203204..203534 | Clytia hemisphaerica | exon |
| TCONS_00056482-exon-scaffold_276-1491911889:202082..202456 | TCONS_00056482-exon-scaffold_276-1491911889:202082..202456 | Clytia hemisphaerica | exon |
| TCONS_00056482-exon-scaffold_276-1491911889:201338..201694 | TCONS_00056482-exon-scaffold_276-1491911889:201338..201694 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_276 | supercontig | scaffold_276:201338..203534 - |
Blast
The following BLAST results are available for this feature:
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