TCONS_00056506 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056506
Unique NameTCONS_00056506
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1869

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056506 ID=TCONS_00056506|Name=TCONS_00056506|organism=Clytia hemisphaerica|type=transcript|length=1869bp
GCTTTATTAAACATGTACCCATATCACATTGATTCGATGCTTCAATTGAG
TGAAGTTTGTCGACACAATGAAGATGTTCAAATGGCTTCTGAACTTGTCG
AGCGAGCGTTGTACGTTTTTGAATGCAACTTTCACACGCTGTTCAATATT
GCACTTGGAACATGTCGCTTGAACTACAAAAGAGCTGAAAGCAGaccctt
ctttttggcattgTTTCGGCACATCAAATATGTTGGAGACCGAGcgtGCT
ACCGAACTGCGTTGGAATTTTGTAAATTGCTGTTAGGCCTTGATCCGGAA
GAAGATCCACTCTGTACCTTATTGATGATAGATTATTACGCCATCAAGGC
TGAAGAGTATGCGTACTTTATCCAACTTTTCGATGAATACGAAACATTGA
GAAATATCTCCATGCTACCCAACTTTCTATACTCATTTGCACTGGCCAAA
TTCTATCAAGGGAAAACTGAAGAAGCTAACAAAGCGATACGAAAGGCTCT
CATTCGATTTCCGTCACTATTTGTCGAGCTGATGGACAAGTGCGGCGTTT
CCGTTGATGATACTCTCCGTCATTTCCCGCTCTTTGATCCGGTATCTTAC
ATCCAACAATCAAAGCCGCTTAACGCACTATGTGCTCTGTACATCGGCCG
CTCACACGTTCTTTGGAAAGCGCCCGAAGTGATCGATTGGATCGTGAGCG
CTGCTAAACGGATCATGGATGAAAACGATCAACACGCCGGAGACATTAAA
CAAGCGAAAATTATGCGTGAAACGAAGTACAATCGAATCCCTAATAACGT
TTTAAGGCATATTTTAATCTCGGAAATCAAAGAAGCGCTCACCAATTTAT
CAGCCACTATTCGGAACCAAACCATCATGACACATGACCCATTGCCACCT
GAAGATTCTGTGACCGGCTACTCAAGACCTGATAGACCACAAGGAAGTCA
AGACCAAAGGAATTTACTGTCTTTATTTTTCCAATCCATCATGCCGTCTT
TTGATCAGGCAGAGAACGAGCGGTTAGCACGTGGTCAACAAGACGAAGCA
CGTGCCATACCCAATGAAGCTGGTGAAGGAAATGTGTTGAGAGATGGTGC
TGAAGGGTTGATGAATGCCATGAGAGAACTTCTACATACTATGACCTTCA
GAAATGACGGTCAAGAAGGAGACGGTCAAGCAAACCAAGACAACGATGGT
GAAGTCGAACAGCAATGGGAAGAAGATGATCAAGATTGGAATTAAATGAC
GACGAGGAAGATTTTGTGGGTATGTGATAGACTACAATTGTCGTCGTGGT
AGCGTAAGGGTTTATCTTCCAGGTAGTTCGCAGTACGCAGACTTGACTAC
GTTTTATTGTTTACGGTGAGTGAGCTTGGCTTGCAACAGAGCTGAAAAGG
AACCCCTTAGTGACGTCACGAGTTCCTACATCGGAACGAAGATGCAGTAG
TCAAGTAGTGGTACTGTAGTGGTCAATGGTACTAAAATAGCCGATAGCAT
ggatttcttcaaaaaatacaactggcacacaacgacttttttttaaattg
tcgaaTGAGCGCAAAATGGACCAAGGAATTCCTTGGTGGACGTCGTTTTG
GTTTTTTTTGCCATCTTGGATGGAAAATCTTCACTGAGCATGTTCAAGAA
ATGATAAATATTGCACGACAAGACAAACACTTTAAAACTCTGATTACTGT
TGATGTCGTTTAGGTTCCTAACGACGGCACTTTGTAATAATGATTTCATG
CATGTTACAGAAGGGGTTGTTTATCGGAATGGTGAATAAtggagaaaagt
ttttttattattgtttttttttcaagcactttATTTTTCACTGCAAAAAG
CACGATTTTTTCATTTGAG
Run BLAST on NCBI

transcript from alignment at scaffold_276:463552..472897-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056506 ID=TCONS_00056506|Name=TCONS_00056506|organism=Clytia hemisphaerica|type=transcript|length=9346bp|location=Sequence derived from alignment at scaffold_276:463552..472897- (Clytia hemisphaerica)
GCTTTATTAAACATGTACCCATATCACATTGATTCGATGCTTCAATTGAG
TGAAGTTTGTCGACACAATGAAGATGTTCAAATGGCTTCTGAACTTGTCG
GTATGTTTGTAGGCTTCTGATTATCCTGTAGCGAAGAGAGTTTCTATCTA
TATAGGAAGCAGATCTTTAGAGATTTGTGATCTAAACTAGTATTTTTGTT
TTAATTTTTTTTTGCAACTGTCGACCATACGCAACTGGTACTGCTTAAAA
TTAGAAGGTTAAAAGGTTAAACGAAAAAGCGTTAGAAACGATTAAGGGGG
AATTTCTTAGGACCAGTGGACACTATTTCCGGAGTGGAATTTTTGGGGGC
CCAAGGAAACCAATGTTCAACGATATCATCATAATCAAACACTTGCCAAC
ACGTTCTTGGATATGTATTGGACTATTTTTTTTTCCTTAAATTTACGCAG
TCTCCTCATGACAGCGAGGCTTTCTTCAATCGATAACTGGTCTTTTGACA
AGAAAAGTCTTATGATTATAATTTCCCACTCATAAATATCTTTTCAACGA
GGACAAAATTTGTATGAAGTTCTGAAGCTCGTTAAAGCTACAGTCTTTTC
TTTCGATTTGTTGGATGAATTCGAGATGGGATTTAGAGTAAGCTCCTTGA
TTACATACCGAGTATTAAACTACCTATATGTTACGTTCATCATTTCTACA
GAGCGAGCGTTGTACGTTTTTGAATGCAACTTTCACACGCTGTTCAATAT
TGCACTTGGAACATGTCGCTTGAACTACAAAAGAGCTGAAAGCAGGTATG
ATAACGGATTGTTTTTCTATACAGTGTGTCCAGGAAAAAAGTGGAGTAGA
CTATGAATAAAGTAAAGTCCTGAAAACTTACTGGATTTATCAATCAATCA
ATAGATATTCAGTTTCCGAATAAAAACCTTAAAGCCAAATTAATGGTATC
TGAGAGGAGGTCGGAATCACTACAAGAGTTATGCTGAGCTTGTAAAAACA
TTGCTGGCTGAAATGATAATCAAAACAAAACAGCGAACGCCACGTCATTT
GGAATGCTTCTTTGAAATTGAAATTGCCAGATAAAGATTTAAACGAATGG
TATTTGATGGTCCAAGTAAATAATTTGTATTGCTTTTGCAAGCTAGCAAG
CAGCTTCATATAATGTATAGATTAGATTTAAACATTAGGGGTTTTTAATA
CCAATTAATGACAAAGGAAGGGTTCATAATTTTGAATTACTGAAACACCG
ACGGAAAATAATGGCTAATACAGTCACACCGTCAAACCCATACGCTCCTC
CTTGTAATCTGGTTCATGTTCTTGTGTGACGTTCATTTTCCCTTTGAAAA
TAAAACTGTTTGCTTTGACCACTGNCCCTTATAATCTGGCCTATGTTCTT
GTTTCCTTGTTTGGCGTCCATTTTCCCTTTGAAAATAAAACTGTTTGTTT
TGGCCGCTGATAAATTTTTTTCTTCTTTTATTTTAGACCCTTCTTTTTGG
CATTGTTTCGGCACATCAAATATGTTGGAGACCGAGGTATTCTAGATTTG
GTTTTGCAGAGATAAAATGTATCAGCGGGTGTTGAGGATATTGGTTATAC
GAGGTGTATAATCGTCTAAAGGGCTGGATATCCTGATGGTTTGAGTTTGG
TTAAGTTTGGTTTAAAACGATATAGAAGATTTGATCTAAGATTGAATTAC
TTTTTAATTTTTAGCGTGCTACCGAACTGCGTTGGAATTTTGTAAATTGC
TGTTAGGGTAAGAAATTTAACCTTCTCCTAACCTTCTGGTCCTTCGTCTG
ATATTAGGGAAACCTAATTTAACCTAATTAAACATATTTTATATTTCATG
TTAATGAAATAGAGAGTGCTCCATAAGCGCGCACTGCCATCGCGGCAATT
ACCGGTAATAACACTGTTTTCTTTGCGGCTACCACTTAAAAAAAACTCCT
ATCAAAGACGGCGGATATAACTTGTTCCAGGGTATATAGGTCAGTAGGTA
TAAATACACCTTTTCGACCGTAGTCGCGCGGTCAGGTGCGTGTACTTTAT
TATTCAATTATCCAACTAAACTCGATCCAATCCTTTTTTGACACCTTTTT
CTATTGTCTATAGGTGCGAAAAAAAGACTGGGACGGTTTAAGAGTGGCAA
AACGAACAAAAAAATGCCCGCGCGGCTATTGGCGGCTACGGTCGAAAAGG
TGTATGTTCTTTATTTGTGTTTCACGAGAAAACTTAAGGCTTCACTTTTT
TTTGTTTGAGAAAATTTGAAAATTCCTCTCTAGCCCCTTCGGGCCTCAAA
CTATATGTATATTATTTGTCTTTCCACTAGCCTTGATCCGGAAGAAGATC
CACTCTGTACCTTATTGATGATAGATTATTACGCCATCAAGGCTGAAGAG
TATGCGTACTTTATCCAACTTTTCGATGAATACGAAACATTGAGAAATAT
CTCCATGCTACCCAACTTTCTATACTCATTTGCACTGGCCAAATTCTATC
AAGGGAAAACTGAAGAAGCTAACAAAGCGGTAAGCATTTATCTTTGAAAT
ACGTTTATGCGGACATAAGCTGTAGTCTTTCAAAGACCTTACATATATTG
CAGAGAAAATTTTAGCCAAAAATCTATCTTTATGGTGTATATTTTTGGAA
TTTTTTGACTGATTTTCCGAAATCTTAATTTAAGAATTTGTTATACGAAC
GTTGGTTATACCTAGCCCCGAGCAATACTTTGTAAACCAAAAGACCTATT
GTATTTGACTCACATTGAGTGCACTCCCTCTTCCACGGGCTAAATTCAAA
AGACGATACAGCTGATGCTCTCTAATTCCATTTTAAAGGAGAATTGGGTT
TCCATTGAACAATTTAAGGGCAGTTGGAATAATAAAGCGTCGTTTCTTGT
TGACGGTGACTTTCAACATAATCGAATAATGGATCGTATCGAATACCTTA
AGAGAACTAATTTTGGCGGAAACTAATTTTGGCGGATTTGGCGAATTTAG
ACGAAATTCGCCAAAATTAGTTCCCGCCAAAATTAGTTCCCGCCAAAATT
TAAAAATTTCGCCATTCGCCAAAATAAGTTCCCACCAAAATTAATTTCTT
TTAGGATTTTTGCTGCCCGTCAAAATTAGTCACCGCCAAAATAAGTTCCC
TTAAGGTAGTAGAACGTCGAATTAGAAAGTGTCAACTGCAACTATTTCTA
ATTTCATTCTCGTTCGTATATGAGTATATCAATTGAGGTTGATCAAATTC
AAGATTTACTCTGGGAGAAAAGAAATATCTAAGAGGAGTCGAACATTTTG
TTTTTTTTTAATGTGAGAATTCTTTTCATTTTTGTGTTTCAGATACGAAA
GGCTCTCATTCGATTTCCGTCACTATTTGTCGAGCTGATGGACAAGTGCG
GCGTTTCCGTTGATGATACTCTCCGTCATTTCCCGCTCTTTGATCCGGTA
TCTTACATCCAACAATCAAAGCCGCTTAACGCACTATGTGCTCTGTACAT
CGGCCGCTCACACGTTCTTTGGAAAGCGCCCGAAGTGATCGATTGGATCG
TGAGCGCTGCTAAACGGATCATGGATGAAAACGATCAACACGCCGGAGAC
ATTAAACAAGCGAAAATTATGTGAGCTATTTGTTTTTTTTTATGGACTAG
TGTTCGTTTTCTATCGACAAGCCTAAACTTTATTCTGTGTCTTTCTGTTT
CCCAAACTTATAGTGCGAATGAGTGATCTTCAAACTTTCTCAAGCAAAAA
TAAGTGAAGTATTCATATTTTCCTCGCATTTTAGTAGGACCCGTGACATC
TTTTATGCGACGAAACCAAACCCGGTCCATTTCAAAGAATGAAGTATCTA
ATAGTAGGGGGAAATTTGTTCGTTTTTTTTTAGGACGCTCGATTGTTTTG
GTCAAAGCACTTGTTATACATTTTTGGAAAGCTAAGGGGTAGGGGAATCA
AAATTACTTAGGTTCCAATTTTTTTTCGGACAATTTGGTGTGACTTTCGG
ACAAATACGACGGTCTTAGGCAAAAATCATAGGGTGAAAAATTAATGAAA
ATTTTAGCTGGAGAAAACGGAGACATGTTGTATATTTTTGGAAAGCTCTC
AAAAATTTAAGATTAGAGATATATTGCAAGTATAGGTGATTTCTGTACTT
AACTCGAGATATTAACCTTTAAAAAACAGTGTTTTTCAGCTAGAAACAGC
TGTTTTGTCCAGTTTTTGCGCTTTTTGAAGCTCAAAAAATTGGAACCTAA
GTAATTTTGATTCTCCTACCCCTTAGCTTTCCAAAAATGTATGACAAGTG
CTTTGACCAAAACAATAAAGCGATTTTACAAAATGCCCTCTACTAATAAA
GACTTTTTCGCGAGGGGTTTTTTTGCTAAGGCCTAGGAAATTTTTTTAGG
ACTCAAAAACTGACGCCACAGGCTAAACCTGTTGACCTCTAATATTTGAT
GAAATTTAAAAGTGAATAAAACTCAAAACCACTTATACCAATCGAAAGCT
CTCAAAAAACGATATAGAGGACTTTAAAGTGGATGTAGTCGATTCCGGTC
GATTTACTCGAGTTACTATTTAGAATGACGTGTTGAATCTAGCACGTGAG
TCATATAATCCAGATGGGAAATAATTGGTTTCATTTCCCATGTAAGAGTT
TCATCTCTAGCCTTTTCGGGAGTTTAAACTCGATGTACTGAGAATAGGTT
CGAATTATAGAAAAGTTTCGAATAAGTGAGAGTCGACTGTATGTGAGTAC
CTTAACGATTCTTATTTTTGATTTCTCTTTGCAGGCGTGAAACGAAGTAC
AATCGAATCCCTAATAACGTTTTAAGGCATATTTTAATCTCGGAAATCAA
AGAAGCGCTCACCAATTTATCAGCCGTGAGTGTGAATTTATTATTAAGGA
TGCTTGACTTGCCATTGAGTTAGTTTTCCAGCGATTGGATCTAATTCATT
CGATTTACAGAGGGAATCTACAAGGGGTTCACCTTGATTGGGAAGGGGAA
TTAGTTTTTAAAACAGAAATGTTCCAGTAATATGAGCTGGAATTAGCAAG
AATCTATAGGGCGAGACCAATTTAATCTGTTGTTCTACGGGCAGATCATT
AGAAAAATATGGGTCGGTCGGTCGGTAAAATAAGAATAAATTTTTCATTT
ATCAGGGTTGGTAAGTTACCGAAAATATTTTCCAAAAATATCTGGATCAA
AAATTCACTTTTTTTATCTTCGATCCAGATCAAAATAAAATTTTAGTGCA
TGAAATGCTTGATTTTTCTAAATTTTTCAATTTCTTGAATTAACTTTCAG
CTTTATTCAAGTTTAATTCTTACAAATAACTAGTGTGTAAAATATATTGT
AGTGGAAATTCGACATTATTATTTTTTTGATTTTAGCAAAAATAGGGTCG
GTCGGGCCCGTAGAACAACATATTAAATTGGTCTCGCCTAGTACAGGATT
TAAAAAGAATTTCGAATTTTTTATTTTTCACATCTTCAGACTATTCGGAA
CCAAACCATCATGACACATGACCCATTGCCACCTGAAGATTCTGTGACCG
GCTACTCAAGACCTGATAGGTTTGCTTTTTTAAGATAATACATAAATATC
AGCTATTAAGGGCGATGGATACCGTAGTTCGGATCATATTAGTACCCTGC
CTAGGGAAAACTGGTATCTTACGAACCAACATTGAGTATAGCTACCAAAG
GGGTACCAGATTCTTTCAATTTCAATGTCCAGGGATTATTGATTGTTCCT
TCCTTATTTTAGACCACAAGGAAGTCAAGACCAAAGGAATTTACTGTCTT
TATTTTTCCAATCCATCATGCCGTCTTTTGATCAGGTAAGCGCCGCTGCT
TAATTAGAAATCGCCATTATCAATTCCATTTGCATTTGAAGAGGTGGTAG
ACAAGTTTAGGAGACAATATTAAATCTGTCGTCGATGTGGTTATGTAGTG
TTGTCTGGACATGTGTTATATAGAAGTGTGGCGATATTAGAGTAACTTTT
ACAGGAAAATTTGATATACACAAAGTCGGCAAATGACAGAGGCCTCTTAG
CAGCTTAAAAGTGAAGGTACTCGACATGCCTAACATGAAAGATTTGAATG
TACATCACCATGGCAATATTCATGCAGCCGGCCTGTGTCTCAAATTGGGA
TTTTTCAGAAAAGATTTTTACCCCCACTGTTGAGGATATTGAGGTATCGA
CCCCCCCTGGATCTACTTTATTAGTAAAGACCCCCTGGATATCCACTCTT
AAAAATATGCTCAACCCCCTGGATATCCTCTTTTATAAAGATGCTTACCC
CTGGATATGGTATTTTTTACTTGAAAAGACACTTTACCCCTGGATATCTG
CTCCCTTGTAAATATTTAACCCCATGGATATCCACTTCTGAACAAAAATC
TGAATATCCCATATCCTCAACAGGGGGGGGCGGACTATTTCTGGAAAAGC
CCATTGGTAGCTGACAAAGTGTTTTTCAGTTTCACTAAGTTACGTGACTT
TGCCAAAACCCAAGATAGGTCTATAGTATGTAGAAGAGGCTGGTGATCAC
AAAAAAGGCTTTTAACACTAACACTCAACATAGAATTTTCATTAAAATTT
TAGTGTTGTTATACAGTGGAGTCTTCATAAATCAAACATGCAGGAAATCT
CGAGCTAAGGAGTAAGGTTTATAAGGCATTGTTAAAGGGACCATAAAACT
TGTTCGAGTTAAGGAGACATTAGAGTTGAAGAGAGTCTACTGTGATGTTA
ACCCAGCTGGCACACAACGTTTATCTAACGTTATATGGACGTTGTGAATG
TTAGAAAAACGTTGAAACAAGGTTGTGTGCCAGCTGGAAACTTTGTTTGT
ATTTTTAGGCAGAGAACGAGCGGTTAGCACGTGGTCAACAAGACGAAGCA
CGTGCCATACCCAATGAAGCTGGTGAAGGAAATGTGTTGAGAGATGGTGC
TGAAGGGTTGATGAATGCCATGAGAGAACTTCTACATACTATGACCTTCA
GGTAGGATTGAGGAATTGTTTTGTTTTTTTCGGCTGTCCGAAATTCTCTG
GAAAGCTTTAATCAAATTGATTTTCGACATTTTGAGAATTAGTCTGTTAG
CCTAGTTAACTAAGCCCGTATTCACTTGGCTAAGTAAGACACACAATATA
GTGTTTTTCGGTGATTTTAAGATAATTCTATACTTTTGAAGATACTTATC
TACCTATCAACTCAGGCTGTAAAAAACGCTAGACTGACGCCCATCCGTCA
TTCCTAACATCAAAATTACCGTTAAACGATATACACTTTTTTATAAGAAC
AAACTATGAGAACTGATGAGAACATAAGGTTTCGATGGCCAAAATGTTAA
GAACAAATTAAGAACATTTAAGGCTTTGTGGACTCAAAAACACCCAATTT
CTTAGAAAAATGGAAAAAAATACTCTAAAAATGGCGAAAATGAATGGCGA
AAATAAGAGCATGTTAAGAACATTTTTAGGCATAAAACTCAAAAAAGTTA
AGAACATCTGAAGGCTTCAAACTAGTTTTCGGCTCATCATCCAACAAAAA
GGGTTTCTTATATAGGAGTCTTGTATCAGAAGCGAACCAGACTTTCAAAA
AATGTTGTGTGTCAGCTTCTCTAATGCCATCTCTTTCTTTTCTCTTATCC
TATCTTTCCTTCGTACAATACGTCAAAATAACATAATTTGTTCGAAGATT
CGTCTGCAAAAATTATTCGTCGGTAAAAAGTGATGAATGTCGTACAGTGG
AGTTTCCATAACTCGAACGCGCACACAAATTATTCGAGTTATGGAGTAAG
GTTTGTCAGCCATGGTTAGCTAAAATGACCATAAAACTTTTTCGAGTTAA
GGAGATATTCGAGTTTTAAGAGTTCGAGTTTCAGAGACTCTACTGTATTA
GCAGGTGGCAAAAATCTTTACAGACCAATTCGTCACCGAAAAGGTATTCC
AGCCCCATCTACGTTCTACCATCGATTCACTCCCATTATTCGATAATATT
AAGTCACCGCCAACAGGAAGTTGTCGTAAACGACACTCTATTATTCGATG
AAAATCAATTCCCCGGTAATGTATTCTCCCCATCTCTTTCATCTCCAGAA
ATGACGGTCAAGAAGGAGACGGTCAAGCAAACCAAGACAACGATGGTGAA
GTCGAACAGCAATGGGAAGAAGATGATCAAGATTGGAATTAAATGACGAC
GAGGAAGATTTTGTGGGTATGTGATAGGTTTGTTATCTTGTCATTTTGTT
TCATACGGGTATCTTACGGTTGCAATCCTATGTCTGTCTTATTGCGGATT
TTTCATTTCCAAAGTTACATTGTTATTATATTTACTGTCTTTTCCGCGGT
ACAGTTCGTTTTCTCTGCTTTTCTAAATTTAGATCCTAAACTAGGCATGA
TAATTTTTTCTGTCTTTAAACCAATGAAAACGTTACGATAACTTCCAAAA
TGAGTTCTAAATACTAAAGATAAATTGCTACGAAAAGTAGACTGAGTGAA
AGCTGTCTTATCATAAAGATAGAGAGAAATCAAACACGGTGTGCAAGTTT
GAGGGTACAACCCGCAACCGGGTGGGGCCAAAGAGCCCAGCTTTTATACC
TAATGCTCAGCAACTAAAGAAACGTTGATGAGACGGAGTAGCAAGCTCCT
CTAATTTCAGGAAGACAAAAATATGAATAGTGGGCCTTCGGGTCGCCCTC
GACTGCTGTCGCAAAACCTCACTGACTTAGACTGAATTATTTTTTCTTAC
GCTAAAGACTACAATTGTCGTCGTGGTAGCGTAAGGGTTTATCTTCCAGG
TAGTTCGCAGTACGCAGACTTGACTACGTTTTATTGTTTACGGTGAGTGA
GCTTGGCTTGCAACAGAGCTGAAAAGGAACCCCTTAGTGACGTCACGAGT
TCCTACATCGGAACGAAGATGCAGTAGTCAAGTAGTGGTACTGTAGTGGT
CAATGGTACTAAAATAGCCGATAGCATGGATTTCTTCAAAAAATACAACT
GGCACACAACGACTTTTTTTTAAATTGTCGAATGAGCGCAAAATGGACCA
AGGAATTCCTTGGTGGACGTCGTTTTGGTTTTTTTTGCCATCTTGGATGG
AAAATCTTCACTGAGCATGTTCAAGAAATGATAAATATTGCACGACAAGA
CAAACACTTTAAAACTCTGATTACTGTTGATGTCGTTTAGGTTCCTAACG
ACGGCACTTTGTAATAATGATTTCATGCATGTTACAGAAGGGGTTGTTTA
TCGGAATGGTGAATAATGGAGAAAAGTTTTTTTATTATTGTTTTTTTTTC
AAGCACTTTATTTTTCACTGCAAAAAGCACGATTTTTTCATTTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035594XLOC_035594Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056506-exon-scaffold_276-1575043694:472798..472897TCONS_00056506-exon-scaffold_276-1575043694:472798..472897Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1575043694:472103..472196TCONS_00056506-exon-scaffold_276-1575043694:472103..472196Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1575043694:471362..471411TCONS_00056506-exon-scaffold_276-1575043694:471362..471411Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1575043694:471141..471183TCONS_00056506-exon-scaffold_276-1575043694:471141..471183Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1575043694:470369..470567TCONS_00056506-exon-scaffold_276-1575043694:470369..470567Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1575043694:469278..469555TCONS_00056506-exon-scaffold_276-1575043694:469278..469555Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1575043694:468023..468113TCONS_00056506-exon-scaffold_276-1575043694:468023..468113Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1575043694:467329..467408TCONS_00056506-exon-scaffold_276-1575043694:467329..467408Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1575043694:467063..467135TCONS_00056506-exon-scaffold_276-1575043694:467063..467135Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1575043694:465897..466039TCONS_00056506-exon-scaffold_276-1575043694:465897..466039Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1575043694:464671..464799TCONS_00056506-exon-scaffold_276-1575043694:464671..464799Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1575043694:463552..464140TCONS_00056506-exon-scaffold_276-1575043694:463552..464140Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1510915933:472798..472897TCONS_00056506-exon-scaffold_276-1510915933:472798..472897Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1510915933:472103..472196TCONS_00056506-exon-scaffold_276-1510915933:472103..472196Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1510915933:471362..471411TCONS_00056506-exon-scaffold_276-1510915933:471362..471411Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1510915933:471141..471183TCONS_00056506-exon-scaffold_276-1510915933:471141..471183Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1510915933:470369..470567TCONS_00056506-exon-scaffold_276-1510915933:470369..470567Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1510915933:469278..469555TCONS_00056506-exon-scaffold_276-1510915933:469278..469555Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1510915933:468023..468113TCONS_00056506-exon-scaffold_276-1510915933:468023..468113Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1510915933:467329..467408TCONS_00056506-exon-scaffold_276-1510915933:467329..467408Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1510915933:467063..467135TCONS_00056506-exon-scaffold_276-1510915933:467063..467135Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1510915933:465897..466039TCONS_00056506-exon-scaffold_276-1510915933:465897..466039Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1510915933:464671..464799TCONS_00056506-exon-scaffold_276-1510915933:464671..464799Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1510915933:463552..464140TCONS_00056506-exon-scaffold_276-1510915933:463552..464140Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1491911889:472798..472897TCONS_00056506-exon-scaffold_276-1491911889:472798..472897Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1491911889:472103..472196TCONS_00056506-exon-scaffold_276-1491911889:472103..472196Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1491911889:471362..471411TCONS_00056506-exon-scaffold_276-1491911889:471362..471411Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1491911889:471141..471183TCONS_00056506-exon-scaffold_276-1491911889:471141..471183Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1491911889:470369..470567TCONS_00056506-exon-scaffold_276-1491911889:470369..470567Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1491911889:469278..469555TCONS_00056506-exon-scaffold_276-1491911889:469278..469555Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1491911889:468023..468113TCONS_00056506-exon-scaffold_276-1491911889:468023..468113Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1491911889:467329..467408TCONS_00056506-exon-scaffold_276-1491911889:467329..467408Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1491911889:467063..467135TCONS_00056506-exon-scaffold_276-1491911889:467063..467135Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1491911889:465897..466039TCONS_00056506-exon-scaffold_276-1491911889:465897..466039Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1491911889:464671..464799TCONS_00056506-exon-scaffold_276-1491911889:464671..464799Clytia hemisphaericaexon
TCONS_00056506-exon-scaffold_276-1491911889:463552..464140TCONS_00056506-exon-scaffold_276-1491911889:463552..464140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_276supercontigscaffold_276:463552..472897 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.43373	6.13937	6.58417	4.86294	1.00594	0.446323	2.65999	1.96126	1.24247	2.3262	1.87579	1.10834	2.27548	3.61645	1.69723	3.20877	1.27778	2.75955	4.33992	3.15018	0.906452	1.6277	1.67287	2.06695	1.38225	2.11341	0	0	1.02779	0.922504
Blast
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BLAST of TCONS_00056506 vs. Swiss-Prot (Human)
Match: TCF25 (Transcription factor 25 OS=Homo sapiens GN=TCF25 PE=1 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 3.604e-86
Identity = 160/411 (38.93%), Postives = 237/411 (57.66%), Query Frame = 1 
Query:    4 LLNMYPYHIDSMLQLSEVCRHNEDVQMASELVERALYVFECNFHTLFNIALGTCRLNYKRAESRPFFLALFRHIKYVGDRACYRTALEFCKXXXXXXXXXXXXCTLLMIDYYAIKAEEYAYFIQLFDEYETLRNISMLPNFLYSFALAKFY------------QGKTEEANKAIRKALIRFPSLFVELMDKCGVSVDDTLRHFPLFDPVSYIQQSKPLNALCALYIGRSHVLWKAPEVIDWIVSAAKRIMDENDQHAGDIKQAKIMRETKYNRIPNNVLRHILISEIKEALTNLSATIRNQTIMTHDPLPPEDSVTGYSRPDRPQGSQDQRNLLSLFFQSIMPSFDQAENERLARGQQDEARAIPNEAGEGNVLRD-GAEGLMNAMRELLHTMTFRN------DGQEGDGQ 1179
            LL   PYH+DS+LQLS+ CR  ED +MA +LVERALY  EC FH LF++  G CRL+Y+R E+R F+LAL++ + ++  R C RTALE+CKL+L L+P+EDPLC LL+ID+ A++A  Y Y I+LF E+E  RN+S LPNF +S  LA F                 ++A+  I++AL  FP + + L++ C V  D ++     F P + I Q   L+ L  LY+GRSH LWK P  + W+      ++   D     ++  +  R+  Y R P N+ RH+++SEIKEA+  L   +  Q++M  DPLPP D++  Y RP+R        N ++LFF+S++P++   E ER            P E   G + R+ G   LM A+R+++      +      D  EG+G+
Sbjct:  278 LLQTSPYHVDSLLQLSDACRFQEDQEMARDLVERALYSMECAFHPLFSLTSGACRLDYRRPENRSFYLALYKQMSFLEKRGCPRTALEYCKLILSLEPDEDPLCMLLLIDHLALRARNYEYLIRLFQEWEAHRNLSQLPNFAFSVPLAYFLLSQQTDLPECEQSSARQKASLLIQQALTMFPGVLLPLLESCSVRPDASVSSHRFFGPNAEISQPPALSQLVNLYLGRSHFLWKEPATMSWLEENVHEVLQAVDAGDPAVEACENRRKVLYQRAPRNIHRHVILSEIKEAVAALPPDVTTQSVMGFDPLPPSDTIYSYVRPER-LSPISHGNTIALFFRSLLPNY-TMEGER------------PEEGVAGGLNRNQGLNRLMLAVRDMMANFHLNDLEAPHEDDAEGEGE 674
The following BLAST results are available for this feature:
BLAST of TCONS_00056506 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TCF253.604e-8638.93Transcription factor 25 OS=Homo sapiens GN=TCF25 P... [more]
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