|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056549 ID=TCONS_00056549|Name=TCONS_00056549|organism=Clytia hemisphaerica|type=transcript|length=881bp
TTTTACTACCCAAATCAGAGAAGATTTTTTAGGCTCGAAATTGTCAGAAA
AATAAGCACACCCAGGCTCAAATTAAGACGtttaaataaacaaattatgt
aaaagatgtatttttgtaaataaattattacgaataaaataacaattgtt
gaaattataaattatacattattgattgatttaattggAAATTATTAATG
TTGTTGATATAATAGCCAGGTTGATAACAAGCTCTTCCAAAGATTAGCCG
TCCTAGACCCAAATCCAAATGGTAACTCGAGTCCAGTTCCTTTGgtcgtt
tttttataattctgaTAGCAATCACGAAAGTTTCACGCACATCAGTAAAA
TTCGACATAAAGTGGTGCGAGTAGCTCTGGGTACTAGATTGTAATGATTC
CAGCTACATTATTCCTTCAGCTCGAtgtcaaaacaatttttaagttACCA
TTTCCTTTAAATGTCACTATCACTTGAGTTTAAAAAAACCACAGTTATTT
TTTAAtccatttattttgattttgaagtaGCGCCCACGAGTCCTCGTGGT
GTCACGAGTGACAGTTTGAAGTGGCTATTCATAGAGTTTTTCCGGTCCTC
TCTTTCCACTTTTTCATAGAATTGCAATAGTATATTGATTATTCGTCAAA
TATTGATTATTGGTCTAATGCTTTAACTGTGATAGCTGTCTATGAATATC
TTGAATAAAATGCTGTCTCTATTTNATATGGTTATCGTTAATCCAAGTGG
TCTAATGCTTTAACTGTGATAGCTGTCTatgaatattttgaataaaatgc
tGTCTCTATTTGTGACAACGTCAAATCATTTTCATTGAGACGTCTTGAAA
TTCTCTTGCATGAAATTGGGTCTTCAAGAAT Run BLAST on NCBI transcript from alignment at scaffold_276:462552..463432 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056549 ID=TCONS_00056549|Name=TCONS_00056549|organism=Clytia hemisphaerica|type=transcript|length=881bp|location=Sequence derived from alignment at scaffold_276:462552..463432 (Clytia hemisphaerica)
ATTCTTGAAGACCCAATTTCATGCAAGAGAATTTCAAGACGTCTCAATGA
AAATGATTTGACGTTGTCACAAATAGAGACagcattttattcaaaatatt
catAGACAGCTATCACAGTTAAAGCATTAGACCACTTGGATTAACGATAA
CCATATNAAATAGAGACAGCATTTTATTCAAGATATTCATAGACAGCTAT
CACAGTTAAAGCATTAGACCAATAATCAATATTTGACGAATAATCAATAT
ACTATTGCAATTCTATGAAAAAGTGGAAAGAGAGGACCGGAAAAACTCTA
TGAATAGCCACTTCAAACTGTCACTCGTGACACCACGAGGACTCGTGGGC
GCtacttcaaaatcaaaataaatggaTTAAAAAATAACTGTGGTTTTTTT
AAACTCAAGTGATAGTGACATTTAAAGGAAATGGTaacttaaaaattgtt
ttgacaTCGAGCTGAAGGAATAATGTAGCTGGAATCATTACAATCTAGTA
CCCAGAGCTACTCGCACCACTTTATGTCGAATTTTACTGATGTGCGTGAA
ACTTTCGTGATTGCTAtcagaattataaaaaaacgacCAAAGGAACTGGA
CTCGAGTTACCATTTGGATTTGGGTCTAGGACGGCTAATCTTTGGAAGAG
CTTGTTATCAACCTGGCTATTATATCAACAACATTAATAATTTccaatta
aatcaatcaataatgtataatttataatttcaacaattgttattttattc
gtaataatttatttacaaaaatacatcttttacataatttgtttatttaa
aCGTCTTAATTTGAGCCTGGGTGTGCTTATTTTTCTGACAATTTCGAGCC
TAAAAAATCTTCTCTGATTTGGGTAGTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056549-exon-scaffold_276-1491911889:462552..463432 | TCONS_00056549-exon-scaffold_276-1491911889:462552..463432 | Clytia hemisphaerica | exon |
| TCONS_00056549-exon-scaffold_276-1510915933:462552..463432 | TCONS_00056549-exon-scaffold_276-1510915933:462552..463432 | Clytia hemisphaerica | exon |
| TCONS_00056549-exon-scaffold_276-1575043694:462552..463432 | TCONS_00056549-exon-scaffold_276-1575043694:462552..463432 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_276 | supercontig | scaffold_276:462552..463432 . |
Blast
The following BLAST results are available for this feature:
|
