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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056554 ID=TCONS_00056554|Name=TCONS_00056554|organism=Clytia hemisphaerica|type=transcript|length=1192bp
ggtcCATAAATTCTCAGTTATGAAAAGGTTAAATATCGTTGTAAATGTAA
TTTCGAATGGAAAGACTAAGCTTCCTATCTTGGATCTTTAGATAGGAAAA
CTAGTCTCNGAATGGAAAGACTAAGCTTCCAATCTTGGATCTTTAGATAG
GAAAACTAGTCTCACATTTTGCTTTTTGCGTTGTGCTCAAATGCAcgttt
tataagagcaaactctCTAAactaagaacacaaggcttcgatggtcaaaa
tattaagatcaTTCTAGGGCTTTGCAAAatctaaaacatccaatttctta
gggaaatggaccaaaatggtgaaaataagaacaagttaagaacatttcta
ggtTTGAGACTATGAGGCTtcaaaaaggcttcaaaatttttggatcttAC
TTTAAACCGCTTCAAAAATAACGTGTATTCTAATATCTATAACAGTATTC
TCTCCATCAACTCGAGATATTCCCAAAGTTTCTCAAATCTCATATAATCA
GACGATTAAAATATTATCTGTAATTTCCATATATTCTAATTTCAATTATT
CCATAATTATTGTACAAaccaaaaagaatttaaatatgttttgtttattt
ataaAATGAATTACGTTCATACACATAATAGACAACACAAAATAAAATCA
CAATGGTACACAATTTGTTACGctaaatctaaaaatatttttacactcTA
AAATATGATATTCATTCTTAAGgggtaatgtttatttttcagctttttct
aAAGTTCTGGTCTTGGAAATATTGATGTAGTCGTTTTCAGAAAAAGGAAC
ATGAAAGAgcacaaacaataaaaaaagaagtgaAAGTTCCTGTAGAAGTT
TACGCAGTTCCAATAACTCGAACATTACTTCAGACTTATTATATGTCTGG
TTTCTTCGGGAATCTTCCCAACGAAAACGACTTCACTTTTGAATTAGTCC
CATGGGAGGGTAACAGGTTTAAAGAAAACACGAGGGAGCTCACCTGAACA
ATTTTAGCACTGGAAATGGGGTTTAAATTCCTAATGTCTTCGTACTCCGC
CTTTTATACGGACACTAAACAGAATGCTTTAAGGAGGTCATCGACCCATA
TAATATCAGTCTGTCTTTTTTCtggtcaaattttcattttttggttaAAA
CTCAAATATAACCTATTCACAACAACTTCCCAAAGTTTCAGG Run BLAST on NCBI transcript from alignment at scaffold_276:599968..601159 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056554 ID=TCONS_00056554|Name=TCONS_00056554|organism=Clytia hemisphaerica|type=transcript|length=1192bp|location=Sequence derived from alignment at scaffold_276:599968..601159 (Clytia hemisphaerica)
CCTGAAACTTTGGGAAGTTGTTGTGAATAGGTTATATTTGAGTTTtaacc
aaaaaatgaaaatttgaccaGAAAAAAGACAGACTGATATTATATGGGTC
GATGACCTCCTTAAAGCATTCTGTTTAGTGTCCGTATAAAAGGCGGAGTA
CGAAGACATTAGGAATTTAAACCCCATTTCCAGTGCTAAAATTGTTCAGG
TGAGCTCCCTCGTGTTTTCTTTAAACCTGTTACCCTCCCATGGGACTAAT
TCAAAAGTGAAGTCGTTTTCGTTGGGAAGATTCCCGAAGAAACCAGACAT
ATAATAAGTCTGAAGTAATGTTCGAGTTATTGGAACTGCGTAAACTTCTA
CAGGAACTTtcacttctttttttattgtttgtgcTCTTTCATGTTCCTTT
TTCTGAAAACGACTACATCAATATTTCCAAGACCAGAACTTtagaaaaag
ctgaaaaataaacattacccCTTAAGAATGAATATCATATTTTAgagtgt
aaaaatatttttagatttagCGTAACAAATTGTGTACCATTGTGATTTTA
TTTTGTGTTGTCTATTATGTGTATGAACGTAATTCATTttataaataaac
aaaacatatttaaattctttttggtTTGTACAATAATTATGGAATAATTG
AAATTAGAATATATGGAAATTACAGATAATATTTTAATCGTCTGATTATA
TGAGATTTGAGAAACTTTGGGAATATCTCGAGTTGATGGAGAGAATACTG
TTATAGATATTAGAATACACGTTATTTTTGAAGCGGTTTAAAGTaagatc
caaaaattttgaagcctttttgaAGCCTCATAGTCTCAAacctagaaatg
ttcttaacttgttcttattttcaccattttggtccatttccctaagaaat
tggatgttttagatTTTGCAAAGCCCTAGAAtgatcttaatattttgacc
atcgaagccttgtgttcttagtTTAGagagtttgctcttataaaacgTGC
ATTTGAGCACAACGCAAAAAGCAAAATGTGAGACTAGTTTTCCTATCTAA
AGATCCAAGATTGGAAGCTTAGTCTTTCCATTCNGAGACTAGTTTTCCTA
TCTAAAGATCCAAGATAGGAAGCTTAGTCTTTCCATTCGAAATTACATTT
ACAACGATATTTAACCTTTTCATAACTGAGAATTTATGgacc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056554-exon-scaffold_276-1491911889:599968..601159 | TCONS_00056554-exon-scaffold_276-1491911889:599968..601159 | Clytia hemisphaerica | exon |
| TCONS_00056554-exon-scaffold_276-1510915933:599968..601159 | TCONS_00056554-exon-scaffold_276-1510915933:599968..601159 | Clytia hemisphaerica | exon |
| TCONS_00056554-exon-scaffold_276-1575043694:599968..601159 | TCONS_00056554-exon-scaffold_276-1575043694:599968..601159 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_276 | supercontig | scaffold_276:599968..601159 . |
Blast
The following BLAST results are available for this feature:
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