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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056600 ID=TCONS_00056600|Name=TCONS_00056600|organism=Clytia hemisphaerica|type=transcript|length=271bp
tttcaggCAAAACGGTGCACAATAAGAAGAACTTTCAAGGTCTACGCTCT
ACATCACAAAAAGACATTAAAATGGGAAAGAAACTATTTGCCAGTAAAGG
CAAACCAACGGAAAGGTCGAACGCTTTGCGCAGAATCAAGAGCAAAAACC
AGAAAAGCAGAcaacaaaaacaatcaaaagcacaaaagaaaaatgaaaaa
tcgaagAAGAAATAAtttcagCGAGTAGCAATTTTTACAAAGTTCCTCCA
AACGCCACTACTTTCACATTA Run BLAST on NCBI transcript from alignment at scaffold_277:14582..16607- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056600 ID=TCONS_00056600|Name=TCONS_00056600|organism=Clytia hemisphaerica|type=transcript|length=2026bp|location=Sequence derived from alignment at scaffold_277:14582..16607- (Clytia hemisphaerica)
TTTCAGGCAAAACGGTGCACAATAAGAAGAACTTTCAAGGTCTACGCTCT
ACATCACAAAAAGACATTAAAATGGGAAAGAAACTATTTGCCAGTAAAGG
CAAACCAACGGAAAGGTCGAACGCTTTGCGCAGAATCAAGAGCAAAAACC
AGAAAAGCAGACAACAAAAACAATCAAAAGCACAAAAGAAAAATGAAAAA
TCGAAGAAGAAATAAGTAAATTATGAAGTCAACTTTATGGATTGTTGCTT
TTTCTTTTATGTGTGGATTAGATCTTTGATATATGGCCCACCCGGTATGG
TCAGATTACAGGCTGAATGGTGACTGAACTAGAAATGCATGTTACTGTTG
ATCTATGGAAAAATGGGTTATTTCTTGGAAATACTGCAATATACTTATTA
ACCTTAACGCCACCAGTGGATTAAGTTCGAGTTAACGATTCTAGAGCTAC
GTCAAATATCTGTCTCTGGGAGAATGTCGGTGTAATTACACCATGCGGTT
GACGCCATCTAACCCTGGTAAACTCGAGCCTTATTCCCGGCTTTTCATTC
AGACACCCTTGTCTCACAGCCCCATTGGAACTTTATTCCTCAGTGGGGAA
AAAAACTCCTATTGAAATCCCAATGGGGATAGAAATTTTATCGTTCAAAG
GTTAAAAAATCCAGTGGGGATGGGTTTGGATTGCAATTTTCAAAAATTGA
TTTTCGAATGTGACGAAATCAAAGTCAATTTACCAGTTGGGCTGAAATTT
CAGGGTATTTTCCCACCGGGGACGAAATTTTTGCCAATTTTCCAGTGGGA
CTGGGGTCCCAGTGGGTCTGTGACACAGGGGTGTATTTAGAATTACCATT
TATACGAAGAGACTGATGGGTGTGTCCTTTAGAAAATGGGACACGGCTGA
TACGATTATGTTTTGTGAGGGAGTTACTGATCATTACTTTATTTTATATA
CGAAAGAATTTTTTAAGTCGAGATTTTGTAACCGAGATAACTTAGTTGAT
CTGAAACGAACCCTGTATGATTTTTTTTAACTAGAAAAAATGCTTCGATT
TTGTATATCTAAGAACCAAAAAAAGTCTGTAATATACAACAGTTCTTTCT
CTACACCCTAATTACGAAAGATTTAGGCTTTTATAATGAAAAGTGCAAAT
TTTAAAACTCTTTCATTGAAAATTTCTCATATTTTTGAGACCCATAGCAA
TTAAGAGGTAGAAATGAGAATTTTTTTTACTTTTGAACGTTAATGACAAT
GTTTTAAGTAAATAATTTTAGAGGTTAGCTTTCTTGGCTCGCTGGAAGTA
CTTTTATCGAAACCCATTCAGAATTGTGTTCTTTCATTGAAACTAGCTTA
TTTTAAGGAGCGCATGTTAAAGCTGAAAAGACAAGTGGATATTTCGGAAT
GATACGTTTTATTCTTGCGTTGTTCTCGATTTTAGTTGGCATACAGAAAG
GTATAAATTTTATGTTTACCACCAAGGAAACACCCAAAAGCTTCTCAAAG
AAGTAAAATAAATGTGTGTTCCCCTTAAGATTGCTACTGGTTCTATATTC
ATACAGTCCTTAGGTATTATCGACAAAAGTTCCACAGGAGACCGTACTTA
GACAATGATGGGAGTTTGGTATGTGTATGATAACACTTTAGGTGCCTCTA
CAAAACCAAACAAAATTAGTCCCTTACAGAATTTTACATTATTTACACCC
CTGTCTCACAGCCCCGGTGGAACTTTTTTCTCAGTGGGGATAAAAAATCC
TATTGAAATCCGGATGGGGGTAGAAATTCTTTTGTTCCAAGGCTTAAAAA
TCCAGTGGGGATGGTTTTGGAGTGCAATTTTTAAACATGGAATTTCGAAT
GGGGACAAAATCAAAGTCAATATCCCAGTGGGGCTGAAATCACATGGCTT
TTTCCCACCGGGGACGAAATTTTTGCCAAACTTTCCAACTGCAACTGCGT
TTTAATTCTTTATTTTTCAGTTTCAGCGAGTAGCAATTTTTACAAAGTTC
CTCCAAACGCCACTACTTTCACATTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056600-exon-scaffold_277-1575043694:16393..16607 | TCONS_00056600-exon-scaffold_277-1575043694:16393..16607 | Clytia hemisphaerica | exon |
| TCONS_00056600-exon-scaffold_277-1575043694:14582..14637 | TCONS_00056600-exon-scaffold_277-1575043694:14582..14637 | Clytia hemisphaerica | exon |
| TCONS_00056600-exon-scaffold_277-1510915933:16393..16607 | TCONS_00056600-exon-scaffold_277-1510915933:16393..16607 | Clytia hemisphaerica | exon |
| TCONS_00056600-exon-scaffold_277-1510915933:14582..14637 | TCONS_00056600-exon-scaffold_277-1510915933:14582..14637 | Clytia hemisphaerica | exon |
| TCONS_00056600-exon-scaffold_277-1491911889:16393..16607 | TCONS_00056600-exon-scaffold_277-1491911889:16393..16607 | Clytia hemisphaerica | exon |
| TCONS_00056600-exon-scaffold_277-1491911889:14582..14637 | TCONS_00056600-exon-scaffold_277-1491911889:14582..14637 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_277 | supercontig | scaffold_277:14582..16607 - |
Blast
The following BLAST results are available for this feature:
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