Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056618 ID=TCONS_00056618|Name=TCONS_00056618|organism=Clytia hemisphaerica|type=transcript|length=1039bp Gtccttttgattttattttaataaacatttttcttcgaaataaatatttt cgaaaatatctttttttgcattataaaaaaataaaaacacaaaatctgCA TAAATCTGCATAAATCTTCTATAATTGCTTCTTCTTCTCTTTTCCATCGA AAGAGTGAACCAAATCCAGAATGGTTACTAATGGTTAcacaaaaccaaaa caaaagaaaacagaacATAACAAAATGGTAGCCAccaccatagatttata aagcccaaagggctagatggagtgctttaagctcttccaagcaaaaaaaa atgaatatcgcaaaaaatattgctgctattgttttcgaaaacccgcgaag cttctgattggtcaagcactgAAATTCTAATGTAATGTCACATGACTTTT TTTGACGTGacaattttcagcaaaagcacaaTATCTAGCCCTCCAGGCTT TACAAATCTTTGGCCACCACTAGCAGGCTTTCTGCACCTTTCTATAAAAA CTTGATATATCTATATCCGTCTATTTCCATGCTTTTAATGGTAATAGTGT AGTCATAGTTTTGGTGCTCAGAGTTTGGATACCGTTAAAATACATTCCAG CAATTCCAATCTGTCCATGCAGATAGATACAATGGTACATGGCAATGACA ACACCAATTCAAAAATCCTAAAACCATCATCTTGATTAAAGTGTTAGTAT CTGAGCGTATACAAAGGTCTATGTGGATAAATCCATGGAGTCAAATCATT GGTGAGCAtacattttcttataaacaaaTATCAACATTTGAGTATGTGAT GACACCGCTCCCAATCACATACTGAATCATCATTTGGATCATTCTCTCAC AAATGACAGcatttttcgtttttgtttACAACCCTCAAATAATACTACTT TTATCAACTTTGAAAGAGACTTCTACACCAGTCTTGATGTTGAGGAGTTT CAATGTGGAAATATACAGCTCTTGGATGTTGACAAACCACTTGGCAGAGA GGACATTCAACTGTCGTTTGAAATGGAATCAATGAActg Run BLAST on NCBI transcript from alignment at scaffold_277:384985..386242- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056618 ID=TCONS_00056618|Name=TCONS_00056618|organism=Clytia hemisphaerica|type=transcript|length=1258bp|location=Sequence derived from alignment at scaffold_277:384985..386242- (Clytia hemisphaerica) GTCCTTTTGATTTTATTTTAATAAACATTTTTCTTCGAAATAAATATTTT
CGAAAATATCTTTTTTTGCATTATAAAAAAATAAAAACACAAAATCTGCA
TAAATCTGCATAAATCTTCTATAATTGCTTCTTCTTCTCTTTTCCATCGA
AAGAGTGAACCAAATCCAGAATGGTTACTAATGGTTACACAAAACCAAAA
CAAAAGAAAACAGAACATAACAAAATGGTAGCCACCACCATAGATTTATA
AAGCCCAAAGGGCTAGATGGAGTGCTTTAAGCTCTTCCAAGCAAAAAAAA
ATGAATATCGCAAAAAATATTGCTGCTATTGTTTTCGAAAACCCGCGAAG
CTTCTGATTGGTCAAGCACTGAAATTCTAATGTAATGTCACATGACTTTT
TTTGACGTGACAATTTTCAGCAAAAGCACAATATCTAGCCCTCCAGGCTT
TACAAATCTTTGGCCACCACTAGCAGGCTTTCTGCACCTTTCTATAAAAA
CTTGATATATCTATATCCGTCTATTTCCATGCTTTTAATGGTAATAGTGT
AGTCATAGTTTTGGTGCTCAGAGTTTGGATACCGTTAAAATACATTCCAG
CAATTCCAATCTGTCCATGCAGATAGATACAATGGTACATGGCAATGACA
ACACCAATTCAAAAATCCTAAAACCATCATCTTGGTTAAAGTGTTAGNAT
GACAACACGAATTCAAAAATCCTAAAACCATCATCTAGATTAAAGTGTTA
GTATCTGAGCGTATACAAAGGTCTATGTGGATAAATCCATGGAGTCAAAT
CATTGGTGAGCATACATTTTCTTATAAACAAATATCAACATTAGAGTATG
ACACCGCTTCCAATCTAGACAACACGAAAAATCCTAAAACCAGCATCGTT
GAAGTATTAGTTTCTGAGCGTATAAATCCAAATGTTAATGTGGATAACTC
CATTTAAAGTCAAATCATTGGTGAACCCATATTCTCTTATAGACAAATAT
TAACATTTGAGTATGTGATGACACCGCTCCCAATCACATACTGAATCATC
ATTTGGATCATTCTCTCACAAATGACAGCATTTTTCGTTTTTGTTTACAA
CCCTCAAATAATACTACTTTTATCAACTTTGAAAGAGACTTCTACACCAG
TCTTGATGTTGAGGAGTTTCAATGTGGAAATATACAGCTCTTGGATGTTG
ACAAACCACTTGGCAGAGAGGACATTCAACTGTCGTTTGAAATGGAATCA
ATGAACTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00056618-exon-scaffold_277-1575043694:385559..386242 | TCONS_00056618-exon-scaffold_277-1575043694:385559..386242 | Clytia hemisphaerica | exon |
TCONS_00056618-exon-scaffold_277-1575043694:385404..385504 | TCONS_00056618-exon-scaffold_277-1575043694:385404..385504 | Clytia hemisphaerica | exon |
TCONS_00056618-exon-scaffold_277-1575043694:384985..385238 | TCONS_00056618-exon-scaffold_277-1575043694:384985..385238 | Clytia hemisphaerica | exon |
TCONS_00056618-exon-scaffold_277-1510915933:385559..386242 | TCONS_00056618-exon-scaffold_277-1510915933:385559..386242 | Clytia hemisphaerica | exon |
TCONS_00056618-exon-scaffold_277-1510915933:385404..385504 | TCONS_00056618-exon-scaffold_277-1510915933:385404..385504 | Clytia hemisphaerica | exon |
TCONS_00056618-exon-scaffold_277-1510915933:384985..385238 | TCONS_00056618-exon-scaffold_277-1510915933:384985..385238 | Clytia hemisphaerica | exon |
TCONS_00056618-exon-scaffold_277-1491911889:385559..386242 | TCONS_00056618-exon-scaffold_277-1491911889:385559..386242 | Clytia hemisphaerica | exon |
TCONS_00056618-exon-scaffold_277-1491911889:385404..385504 | TCONS_00056618-exon-scaffold_277-1491911889:385404..385504 | Clytia hemisphaerica | exon |
TCONS_00056618-exon-scaffold_277-1491911889:384985..385238 | TCONS_00056618-exon-scaffold_277-1491911889:384985..385238 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_277 | supercontig | scaffold_277:384985..386242 - |
Blast
The following BLAST results are available for this feature:
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