TCONS_00056624 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056624
Unique NameTCONS_00056624
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length771

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056624 ID=TCONS_00056624|Name=TCONS_00056624|organism=Clytia hemisphaerica|type=transcript|length=771bp
CAAAcctttaaaattataaaaaaagatcTGGGAACTATATGGCTTTTGCC
TTTTctttaaatttcgaaaaacttaGGCAATCGACGACAAAAACCAAAGA
GATAGAGAAGAGCACGCAAAAGACTGAAGAAATCTGCGAAACCATCAACA
AAATAAGCGACTATTTTCGAGAAGTCGAACATGAAGAAAGTaacattttt
cattcaaattttggtGGTAATTGGCTCAACATGTTCGACCAGCCAAGTAG
GAAATAAAGAAGCATCTTTAGACACGAAAAGCAGTCAAAAAAAAACCCTC
GCTCATTCACCTGCTTCCACTTGTCGAGCGGGTCGAGACGGTCGTGATGG
CTTGAACGGGCTACCTGGACGAGATGGGGAAGATGGATGCCCGGGACAAG
ACGGCAGAGACGGACTACCAGGTGTCAGAGGGCCAGAAGGTGTTAAAGGT
ATACAAGGCCGTCCTGGATCAAATGGAACGAAGGGAGACCAAGGTGTTCC
AGGAAAAGATGGCAAAGACGGTATCAATGGAGTTCCTGGGGTAAATGGAA
CAAAAGGCGAGCAAGGCCCTCCTGGAAAAGatGGTTCAATTGGTGGCAGT
TACTTTAAAGAATGTGCCTGGAGATTTACATCTGATAAAGAAACTGGCTT
GCTTAAGGTATGGCTTTTATCAATGTTAAAAAATTTGATGTATTGATAAT
AACCATAGCAGAACATTTACTGGTATATCATATTAGTGTTGCGAATCCTA
TGAAAATACCAAGCTTCAAAG
Run BLAST on NCBI

transcript from alignment at scaffold_277:412503..427984-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056624 ID=TCONS_00056624|Name=TCONS_00056624|organism=Clytia hemisphaerica|type=transcript|length=15482bp|location=Sequence derived from alignment at scaffold_277:412503..427984- (Clytia hemisphaerica)
CAAACCTTTAAAATTATAAAAAAAGATCTGGGAACTATATGGCTTTTGCC
TTTTCTTTAAATTTCGAAAAACTTAGGCAATCGACGACAAAAACCAAAGA
GATAGAGAAGAGCACGCAAAAGACTGAAGAAATCTGCGAAACCATCAACA
AAATAAGCGACTATTTTCGAGAAGTCGAACATGAAGAAAGTAACATTTTT
CATTCAAATTTTGGTGGTAATTGGCTCAACATGTTCGACCAGCCAAGTAG
GAAATAAAGAAGCATCTTTAGACACGAAAAGCAGTCAAAAAGTAAGTTCT
ATAGTTTTACCATTCTCTTAACACGAGCTTGGAAAACGACCTCTGAGAAA
ACTCTTACGGCGATCTGCCAAATTAAATTCTCGCCTAAATTCATGCTTTA
AGGAAAAATATTTTGAATGGATTACTTCGACGTTGTTCTCAGAGACTAGT
GAGCCGCCGCTGGCTCTGTCGAGTACATGCACGTACACTGAAATTTAATG
ACTTTCGTACCCACATCCACAAAATATCAATAGATCGTCAAAAGGAGCAA
AGATATTTTTATTGTGTCTAAGAACACACTAAAACACATATCAATCTTTC
ATAGCAATGTTCTATTCTTTTTCATTAGAAAACCCTCGCTCATTCACCTG
CTTCCACTTGTCGAGCGGGTCGAGACGGTCGTGATGGCTTGAACGGGCTA
CCTGGACGAGATGGGGAAGATGGATGCCCGGGACAAGACGGCAGAGACGG
ACTACCAGGTGTCAGAGGGCCAGAAGGTGTTAAAGGTATACAAGGCCGTC
CTGGATCAAATGGAACGAAGGGAGACCAAGGTGTTCCAGGAAAAGGTAAA
TGTAAAAGATTCAAGTGCAAAAGAATATATGTATGTAATTAATTTTAAAG
AGATCATTAAAAAGTAAGGTGCGCGCATCCTCTCGGATATGATTGGATAT
GTACGTACTTTTTGAATGGTCCCAAACTCAAAAACGGGGTGGGGGGGGCA
AACTATCGAACGGGAATTTTACATACGTTATTAAAACATATTAGAGGATA
TCTTTTTGACTTATTCGTACTCTTTTTATAACACATAGAGGATTCCGTTA
TACTGAAAGTAATCAAATAAATTTCATTATAAGATGGCAAAGACGGTATC
AATGGAGTTCCTGGGGTAAATGGAACAAAAGGCGAGCAAGGCCCTCCTGG
AAAAGGTTAGTAAAAATTTCCTTTAATTTCTGTTACATGTAAAGCATTTA
TAAGCAAAAAAAGTTCTTGATCAGATATCAAAACACTTAAAAATAATAAA
TCTTTCTTATGTATATAGCCTGACAAAGTAGAAGACAAAACTAGAGGATA
CTATCGATACCGTTGGATGGATAGTAAACGAAGGAAAATATGCATGCGTC
TAGTAAACGCTCATTACGGCGTTTTACAGAAAAAAAACGGCAGTAAAGTT
TAGCCCTGTGTAAATGACAGGATTGTCTAAGTTTAAACGAGCATAGACTT
TCGCAAATCGTAAAACCCATGAAAATGAAATATTAACGCTAATCAGCATA
AAAAGTGACAAACAACTTCTATTATAAAACCCCCATTGGTTGGAGGGTTT
TCGCGGCGCTTTATTGCATGAATTTTTGAAAAATATGGCGTAATGGCGTG
CAAATCATAGCAGCGTGGTCATGTAATGAAGATCTTTAAGGTGTTAATTC
TGAGGCCAATAGCTGTTTCTTTTTTTTTTATTTCAGATGGGTCAATTAGT
GGCAGACACTTTAAAGAATGCGCCTGGAGATTATCAACACATACAGATAC
TGGCTTGCTTAAGGTATGGCTTTTATCAATGTTAAAAAAATGATGTATTG
ATAATAACCATAACAGAGCATTTACTGGTATATCATATTAGTGTTTTGAA
TCCTATGAAAATACCCAGCTTCGAGGAATAGAGTGCAGCTTGCAGCTGAT
AGATTAAGGGCTCTGAGCACAGTCAAAAATTAGATTTTAGTATTTGAACA
TGAAAGTTATGTTTTAGGTTCTTTAACACTTTTAACAATTAATTGCCGTT
ATAAATTGCTTTTTAGTGAAATTCCTTTTAAGAGTAATTGAGAATATAAT
TGCAAAAATGACGCCATGAACTTTAAAAAGAGGTTAGAAATATGTTGCAT
TACCCTCTTTTATAAAAAGTGATAAGTTTTAATGGGTAATTAACCTTTTT
GTTTCGAAGTTTTTCCAAACTGTCCACAAAGTATTGAACAGTTTTTAAAA
TTAATGCATCAAAAGTTATTAGCTGTTTTTTTCTATCNAAAATTTTTCTA
AATTAATGCATCAAAAGTTATTACCTATTTTTTCTATCAAAAAAAAAGTT
TGAATGAAAAATTGGTCAAAAAGCACTATTTACAAGGTTTTGTGACAAAT
AAGCTTTACGAAAAATGTTCCAAAAATATATTTTAAGATCAGTAAAATAT
ACATCAACTACCTGAAAAATAATGTTTCTTTGCCGAAAATAAGTTGTTCA
AAATTGAAATACTCTTCCTCGCAAAAGTCTTCATTTTCTTCTTCATCAAA
CTTTTTCACTGCGATTTTTCAATTTTCAAACTCAAGGATAATTGACCTAA
CAGAAAATGTAAAACATGCAACAGTTTTGTGGGGTACATCAAGTAGGAAT
TTATATTTTGTACGTGGAAAATATAAATTCACTATGGTCAGAGCCCTTAA
GGCCCTCCTTAAGCATATTATTATAGTGGGATCAAAAAAGAAGAATATTT
TTTTGGAAAGAAATTATTGTCTGTATTTTGAAGGGATATTTACTGTATGA
CTTTTTATTCAATCTTTCAAATGAATAGGATTGCAAGTTCAATAAATCAA
AGACCGACTCATACTTAATGGTTTCAATTTCGTCTAATATATTTCAAGCA
ACGGGTGGCGCCTGCAGTCGATGGTTTGTCACCTTTGATGGAAATGAATG
TTCTCCTTACCCAATAGAACATGCGTACTACAGTAACATTGCGAATACTG
ACCACATCCCGTTCACACTGAAAGGTATTTGCAAAATCAACAAATCAGGT
GTTGTGAGCGTTGGATTCAACGTTGGGAAATGTAATGGTGGTAATTCGCT
CGGTGATGCTTACACAGGATGGGATCAAGTGACACGCATTGTTATTGAAG
AGCTCTAAACACAAATTATTTAATTCAATTTCTCAAATTAGGGAGGTATA
ATGTATAATGTAGGAAATTGATAAAATAATATTTTTACTTTGTATGAATC
TTCATTACAGTGTGAGTGAAAATACCAGTTTAATTCATCAGAGAACTAGT
ACCTGTATTATGGTTGTTAAATTGAATTGTATTAAGGGTAGATGGTGAAA
CCCCAGGGAGAAAGATAGTAGAGGATATTTTGTAAAATCGCTCGACTGTT
TTAGACCAATTGGTATGGATAAAATGCCGTTATAAACTTAACGTTTGCAC
ACAAATAGGTGTGTGGTTTGGTTGTCAATCAGTTTTTTGGCATTCTCATA
CGCGTAAGTCAAGATTATATCATTTTTCCTATCGGAAACACCCGAAAGGT
TTAGAAGGAGCTTGACCTCTGTTTTCTATTTTTAGTAATACACAGGGGTC
AAATTCCAGTTTTTTTCGGGTGTTTCCGATAGGAAAAATGACGTAATCTT
GACTTATGCATATAAATAACTGTTTGACAACTGGTGGGTCACATCAAAGG
AACCCGGTTTGAGGGCTGAGGTATATTGGAGTGAATTGACAAAGCCCACC
CTGGTTGGGTGGAGAAAGTTTTTGAATTTTGAAGGGTTCAAAGTGCTATT
TCAATCCAATTTGAAAAATAATTCATGTAAAAATAATGGAAATTTTTTAA
TAGTTTTTGGTAAAAACATGTGGGGTCATGCCCTCTGTCTCCTAACGGAG
ACTTGTTGTATATTTTTGGAAAGTCTCAAAAATTAAGATTAGTGAAATAT
AGCCTGGGAATCCAAGCTCATAATCTTATAAAAAACAAAAAATACCTCAC
CTCACAAGATTATAGAGCGTGGTGCAGGTAGATTAGTCTGATAGTTATAA
ACAGTCTCTGTGTAAACCCTTGTTGACAGACTTTCTGAACTTTGGAAACC
CAGGCATACCATAAAAATTCTTTAACAAGCTCTAAAGACTTTCAAAACTA
CTAAAAACCACATCAAAACATCAGCCACGTGTATTTAGACTTCCAGGCCA
ACAGCCATTTTGTTTCTAAATGAATCCGGCTAGTACGAAACGCAGGTCCA
GGTTCAGGTTTCAGGGCCAGGGTTCAGGTTTCAGGGTTTATGTTAAAATT
GTCTACAATACAGACTCGCTTTTTAAAATTACTGACCTCTTTACTTTTTA
CTTTTCTTTTTGACCAGGTTGTCTGGAGAAATCAAACAAAAAAGCGACGG
ATGAATAGAATGCATTCACACCTGACCTGTCGTTATTGACAAGTGTTTAC
AGTTAGTGTTTGGCTTGAATAATAAAACATACGTTTTTTTTTTAAAAGCT
AAATTGTTCTTTGAACACAAATTCAACGAAAAGAAAAAAGATTTTCGTCG
TTTTTTATTTCAGCCAATTGATGATTAATTTCTTAAATTTTCAGTCTCAT
GGATGATTGGCCTAACAGAAAATGTATAACATGTCAAACTTTTGTCCGCT
ACATCAGGGAGAAATTCGTATTTTTGTAAGTGGCAAATATTAAGAATTCA
CTATGGTCACAGCCCTTGATTTGGCGGATAGCTAGATAAATTAAATTTGA
CGGGAATTTAATTTCGCGGTTGTAGGATATTTTTGGCCAAAAGCGTTATC
ATATAAGAAAAAAAATCTGTTTTAAGGCTTCAAAAAGCTCAAATTTGGGA
AATGTGTGAAATAAATTAAATTTGGCGGGAATTAGATTTGGCGGATGGAG
GATAAAATAAATTTTGGCGGGAACTTAATTGGGCGGATTTTTGCTAAATC
CGCCAAATCCGCCGAATTTTCTTTCCACCAAAATGTCTTCCTTTAAGGTA
ATTGTTCAAACATGACCATGGAAATTAAGCATACATTGAGCTTAAGACAG
TATTCTTATGCAAACATAACCATGGGATTAGTTTGCATTAGAATTTTACA
AATTCGTAGAATTTTACAACTTCGGTACTTGTTCAAACATGACCATGGGA
ATTAAGCATACATTGAGCTTCTCCCAAATGTCGTTGTTTACCATTTCGAA
TCGACACGTAAGTTAACCAACCTTAACAATAGCTTTTGTTTCAACGATGC
GAAGACAGATTTTAGGGCGTTGAAAAACATTGTTCTACCAATAAATTTTT
TTTCGTTAGCCATATTTGGAATTAGACTTATTATCATGCAAACGAGGAGC
ATTATTCCTCTCTTGCATAGAATTTTCATTATAAATACTGAATTTTAATT
CNAGATCTACCTTTAAATTTTTTTTCGTTAGCCATATTTGGAATTCGACT
TATTATCATGCAAATGAGGAGCATTATTCCTCTCTTGTATAGAATTTTCA
TTATAATTACTGAATTTTAATTTAAAAGTAGTTATAACTCTCTAGCAAGC
ATCGTATTTGGTATGTAAACTTTGTTATTTTAAAGTCTTGAAGATATAGA
AAAAGCTGTTTTATTTACTGTTTGAGCTTCGTTTTGGATCGCATAAGAGG
TTTTGAAACCTAGGATTTAAAGTTAAGATAAGTTAAGTTATCGGTTATCT
CAAAAATACTGACTCGCGACAACGTTGACAATTTGAGAGCAACTTTAGTT
CCAATTCAACCTCAAAAATTACAAAAAGGATCTGGGAACTATATTATTTT
CTTTAAATTCTGAAAATTTTAGGCAATCGACGACACAAACGAAAGAGATA
GAGAAGAGCATGCAAAAGACTGAAGAAAGCTGCGAAACCATCAACAAAAT
AAGCGACTATTTTCAAGAAGTCAAGCATGAAGAAAGTAATATTTTTCATT
CAAATTTTGCTGGTACTTAGCTCAACCAGTTCGACCAGCGAAGTAGCAAA
TGAAGCACCATTTTCGGACACGACAAGCAATCCACAAGTAAGTTCTTGAG
TTTTACCACTTCCATTGTGTCTTTAACCCTTTAACTGGGGTTGATCTAAA
AAGCAGGGTAGCTAATTTGGATAGGTTGTGGGGTAGCTGTGTATTTCACA
GACCAGAGTAAAAAGATAAAAAATTTTTAGAATATAATCCTCATTGGAGC
CAGGAGGTAAAACTTTGAAAAAAATATCTATACATTTATAGCCGTAGTCT
GTATGTCTGTTTTTTGTTTTCAGTGTGACACTTTCATTTTCACAAGCAAT
GTTTTTTTTCTCGATAAGTTTGTTTTGATTGATAGATTGGATAGAGCCTG
GTTTAGACTTTACTCAGTCTTTGTTTTGAAATCTAAGGCCCATCTACATT
TAGGAGGCCCCCCCCAGCGGTTGGCGTGATGGCGTGATGGAGGGTTTTTC
GTGGCGTGATGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGATCG
TGAAATCGAGTTTTTTTAGGCGTGATGGCGTGAAATTTGCAGTTCAGCGT
GATCGTGAAAATTATATTTATTAGTTGAATCGTAATTCTATGTCCATTTT
AGCCAATTTAGAGGGTTTAAATGCAAACAGTTTTATTCATCCGCCATTTA
TCCTTGGTAGTATCCAATTGTCTTTAGCAGTTGCTAGCTAGTCTTTAAAA
TAAAGTCGAATGCTATGAGGGTCGAAAACTGAAAATTTCTCCGGTTGGCG
CAAACCATGGTTGCGCTTCGCTTCCTCTGTAACATTTTCCTCTCTTTCTT
AGATACATCAAAGACATCAATCAGGTCCTTTATTTCAGGAAAATTTATAT
AGCAAAGCCAAGTTTATTATGAGGTGTAATTTTGAGCAGATTGGAATTGA
TCAAAGGATAGGAATCCTGTAATGTTTAAACCATATTTTGGAAAAAAGAG
AGTAAATGAGGGCGATTTTAGCCGTACTAAATTGAAAATTTCTCCCGTCG
GCGCAAACCATGGTTGCGCTTCCTCGTTCCCCTTCTGAAAAATTTTCACG
CTAATTCACAATTAATACCCATGGGTCCCGTCCATGGAGGACCAGGGGCA
TGTCCCCTCATGTTTTTACCAAAAAAGCTGTTTGTACTTTTAAAAGATTT
CCATTATTTTTACATGAATTGAAATGGGTATTAAAATAGTACTTTGAACC
CTTCAAAATTCAAAAATTTTCTCCGTTGCCCAACCATGGTGGGCTTTGTC
AAGATTACGTCATTTTTCCTATCGGAAACACCCAAAAACTGGAATTTGAA
CCCTGTGTATTACTAAAAATAGAAAAACAAAGGTCAAATTCCTTTCAGAT
TTTTCGGATGTTTCCAATAGGAAAAATAATATAAACTTGACTTACAGTAC
GTGTATGAGAATGCCAAAAAACTGATTGACGACCAAACACACACACACAC
ACCAATTTATGGGCAAAGATTTGGTTTATATAACGGCATTTTATCCATAC
CAATGGGTCTAAACATGGTCTAAAACTGAGTTTATCCAGAGAATAAGAGC
GTGAAAACTAAATTTTCTAGGCGTAATGGCGTGAAATCAAAAGAAATTGG
CGTGATCGTGAAAATCAAATTTTTTTGGCGTGATGGCGTGAAATCGAAAA
AAATTTGGCGTGATGGCGTGAATTTTGGGTCCGCTGGGGGGCCTCATTTA
GTAATTTTAATTTCTGTCTGCCTAGGGCTGCCCATCCCTTTGTTTTTCTC
TTTTTTTTATTTGAAATGTTTTCGAATGTATTTAACGATCGTATTTATTA
ATGGCATTTAAATTTTTTTCAAAACAAAGCAAGTTTCTTTTATAGAAAGA
ACATTTCAAATGTAAATCAAAACAAAAAGTTTGTCAAACAACATCAGCAT
TCAAAGGGCGATAAAAAGCAAAAGGAAAATTAGTCCACCTCTTTCTTCAT
ATAAAAACATTCAATTTTGTAATTTTTCTGCACACTTTTTTTAATTTCGA
GCTGCGCAGTTTTGTAATTACACCCTTTCGCACTTTTGAAATTTCAGAAA
AAAATCGACCATCTTTTATACAATATTTTTTCCGGATTCATCCTTGACCT
TTGTCAAGGATCGTTAAAAAGCTTTCTAATTAAAAGTTACTTTACTTTAT
TTTCATATGATTCATTGATCACAGTACTGATTTGTTAATTTGGCTTCCTA
GCACTGGCTGAAGTGTTAAATTTAGTTGAGAAATCTAATAATAAAACCCG
AAAACGTAATGCCGAGTTATAACTCTTATAAGTCGGAATTTTGAAATGAA
TTATTTTAAGGGCTCTGACCAGAGTGAATTTTGATATTTGTCATGTACAA
AATATAAATTTCTGCCTGATGTAGCTAACAGAACTTTGATATGTTATACA
TTTTCTGTTAGGCCAATTATCCTTGAGTCTGAAAATTTAAGAATCGCAAA
GAAAAAATTTGATGAAAAAAAACATGAAGACTTTTGCGAAATACTCTTTT
CAACTTTGAAGAGCTTATTTTCGGCGAAGAAAAACATTTTGAAAATCTTT
TTGCAGTACTGGTGTATCTTTTACCAAACCAAAAAAGATTTTCGGAAAGT
TTTTCTAAAAGCTTACTTGTCTCAAAATCTTAAAAATAGTGCTCATCTCA
ATTTTTCATAGTAAAACAACCATAACTTTTGATGCATTCATTAATTTAGA
AAAATTTCCCGAAAAATTTTAAACAGTTCAATTCTTTGCAGACAGTTTGA
AAAAACTTCGAAACAAAAAGGTTAATTACCCATCAAAACTTAGCACTTTT
TATAAAAAAGGGTGATGCAACATATCATTAACGTCTTTTTAAAGTTCATA
ACGTCATTTTTGCAATTAAATTCCTAATTACCTTTAAGGGATTTGATCAA
AAGGCAATTCTTTCTAAAAGTGTAAAGGAACCTGAAACATAACTTTTATG
CCCAAATGACCAAAATCAATTTTTTGACTATGGTCAGAGCACTTAAATTG
TCACACATAACGTATACTTTGCAAAAAGTTAATTCATTTTGTAAAACAGA
CCGTTATAACTAATTATGCCACATTTCCAAACTTAAAACTCGGATTAACT
CCGTTACAAGAAATCGTTAAGGTTTTTATCTATTATTTCAAGGGAAAATT
TGGTCGATTTTTTTGTCAAAATTACAAAAGTGCGCAGCCACTTGATTACA
AAACTGCGCAGAAATTACGAAACTACGTAAAAATTACAAAACTGCGCATA
ACAATTGACTTTTTTTTTTTTCAATCTGTACTATTCTTTGTCGCTTCCTC
GCTTTTTCCTGAAGACTTGTCATTTCTACATTTCACTCCTCTTTACCATG
GCATACAATTTTTTCAAATTATCGAGAACTGGACGGCGTATTTAATGCCA
GCGAAGTGAGAAAAAGATCTCCGGGGAAGGATAGAGTCACACTTTGAAGA
TATTTTTTTTTCATTTGATCGTTTTTCAAGCCAGCTTCAACATCCAAACG
ACTTTTAGTGCGTTCAGTTACAGTTTAACCGGCGTGCGAAGCCGGGTACC
GGCTAGTTCTAATTATTCATTTATAAAGCAGAAGATATTCAAAGATTTAA
CTTAACACATTATCAGAGCTTGTTTCCTCTACTATTTGAACCTTCTGATA
ATATAATTATCAAGTGTGATTTCCTTGTCACAAGGAGTGGATCCCTAAGT
TTCCATAAGTGTAAGGTAAATATCCTTTGTTATGAGATTGTCCATTGTTC
TGATTTTCATTTTGAGTCTCTGTTAGAAAGTTGGGATTCCATAACCTGAG
GATTGAGAATATTTCAACCTCGGAAGACCAATAATAGAAGTTTTATCGCG
CATGTGTCAATCTAATCACTGTAGAAAAAATCAAAGATGAAGAGCAAATA
TTACCATATTAATGTCTAGCAGTCACATTATGCGAGCTCTAGCATTCCAT
ATTATGGTGCGGTCATAATGCGGTTATATCAGTAGAATAACAACTAGGAA
ATTCTGAGCAAGAAGATGTAGGTACCTTTTCGTATAGTAGAGGTGTACCC
AAAATATAGGCCCTAAAAGTTTGCGCATAATCAGGCTTGAACCAAAAGAA
TTTTGTCACAACACGCTAATTATGCAAATTTCTTATAGCGACAACAAAAG
AAACCCTATTTACTCGACATAAACTCCCTTAAGGGCAAAAGACCTGGTAT
ATGACGAGCCGTTTTTCCATTGTTTTCAAGAAGCTGTTTTTCCATCTCTT
TACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNGATGAGCTCAACCGCGAAATTCAATCCCCGCGAA
AATTTATCCCGCCATTAAAGTAAGCGCCCCTCCCTGGAATAAAATCATCA
TCCAACAGCTCGAATTTGTTGTCATCTTTATACATTTTTCTTATATTTTT
CCTCCTTTGATTTTGGTCGAACGGCTATCTTCAGTATCTTCAAAATATTT
GTGTTTGTTTTTAAAAAAATCGAATGTTGTCAAAAATAATCAAATGTTTT
GGAAATTCGAACACTACTCAGCGTGTGGAATTATGTTAGGAGAAAATGGT
TTTGATCAAAAATATTACTTCTAAAAATGAAGTAAATAATCTTAATTTCT
CCTGAATGGTTCAACAGTTTTGTTGTTTCCGTATCAAGCGGGGTATTACT
AACCTAAATAAAATCAGTCATATAATCACAGTAATTACTAAACTATTAGT
ACTAGTAATCGTATGGTTTGGAGTGCAATTAACGATTAATCACGAGTAAC
AAAGGAGAAAATAGTAATTTGCACGAGTCCGAAGGACGAGTGCAAATTAC
GGTATTTTCTCCTTTGTTACGAGTTACGAGTTCATTAATNTTAACCGCCG
TTCGTGTTTTTAAGGGTTCGACCTATTTGCCAGATGTCGGCACATCCCGA
CATGAGCGACCACAGAGTTAAACATCGCATTTAACTTTATTTTCTGAAAA
ATATCAGAAATATAAGTGATATGTGTTAACTTTGAGTTGAAAAATGTATA
ATTATGAAAACCATTTTTGAGATATATTTTAATTATTCAACAGTTCTAAT
TAATGAAATCTAGTTCAAAATCGAACAATCAATAAACTATAAAAAAAACC
TCTGGCAAATAGGTTGAGACCTGGTTAAAAAATCGAAAATATACTCTTGT
CGGCACATGTCGACAGCGGCACGGAAAGGCATTCGATGTTACATTAAACA
AAGGATGAAATTTTGGCGGAAAGAAAATTTGACTGATTTCATGGAATTTT
CCTGCCAAATCAATTTATTTTATGTATTTTCCTAATTCGTGTCCTGTCAT
TTCATCATTTTGCTTATTTGATAAAAGTCTTTTTCCAAAAATATCCTGCA
ATGGGAAAATTTATTTTTTCAAATATTCGCCAAATGGAATTTCCCTCTAA
GAAATCTTTTTCGGCGATCCGCAAAATTAAATTCCCGCCTAAATTTACTT
TTTAAGAAAAAATATTTCAATGGATTACTTCGAGGTTGTTTTCGAAGACT
TCTGAATTGCCTGCTCTGTGTGCTGGATATGCACTTACACTAAACTTTAA
TGACTTTCATACTAAAATCCGCAAAATATCAATAGATGATCATCAAAAGG
AGCAAAGATATTTCTATTTGATCTAGGAAGTTCCTGCTGCACCTACACNA
TATCTTTTTGACTTACTCGTACTCTTTGTATAACACATATAAGATTCCGT
TATACTGAAAGTAATCAAGTTAATTTCGTTATTAGATGGCAAAGACGGTA
TCAATGGAGTTCCTGGGGTAAATGGAAGACCAGGCCCTCAAGGCCGACCT
GGAAAAGGTTAGTAAAGATTTTCTTTATTTCCTTGTTCCATGTATAGAAT
TTATAAGCAAAAAAAGCTCTTCATCAGATATCAAAACACTTAGAAATAAA
ATATGTCTTATGTATATAGCTTGATAAAGTAGAAAACTAAACTAAAGTCT
GTCTCGAAATAATTTGCAGCTGGAGAAAAAAATGGCTGTAACTTTTGATA
GAATTCGAATCAAGTTGCGGTTTTGTGCTCGTTAAAAAGATATTCGTGAA
TGGAATATTATCAAGTAAAAAAATTGAGAAAAAAAAGGAAAATGAAAATG
AAAAATAAAATGAAGAAGAAAAAAATTAACTTCTTGTAGAAATGTGGTAT
AATTATCATTTTCACAGGAGTGACTCTTCAATCTTTATTCATCATCACTG
TGAAAAAAATTTTCAAAAATATTCATTCAATCAAAAGATATCAAACAAAG
TTTATTGCTGGTTTTTTTTGTCGTTTTTTTTGTCGTTTTTTAGTACTTTA
TAGAGTCAACCAGCACTAAATTTTGTTTGATATCTTTTGATTGAATGAAT
ATTTTTGAAAAATTTTTTAACAGTGATGATGATCTAAGATTGAAAAATCA
CTCCTGTGAAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNACCGTAACTTGATTCGAATTCTATCAAAAGTTA
CAGCTATTTATTTCTCCAGCTGCAAATTATTTCGAGACAGACTTTAGACG
ATACTATCGATACCGTTGGATGGATAAAGTAAACGCAGGGACATATGTAT
ACGTCTAGTTAACACTCATTAGGGTGGTTTACGGCTTACGGGGAAAAAAG
CGGCAGTAAAGTTTAGCCCTGTGTTAAAGACAGGATTGTCTAAGTTTAAA
CAAGCATAGACTTTCGCAAATCGTGGTACCCATAAAAATGAAATATAAAA
AGAGACAAACTTTTTCTAACTCTATTAAGAAGGCCCCTTCCGTTGGAGGG
TTTTCGTGGCGTGTTATTGCATGAAATTTAAAAAAATATTGCGTAATGGC
GTGAAAATCAAATAACGGCGTGGTCGTGTAATACAGATTTTTAAGGTGTT
AATTCTGAGGCCAATAACTGTTTCTGTTTTTGTGATTTTAGATGGTTCAA
TTGGTGGCAGTTACTTTAAAGAATGTGCCTGGAGATTTACATCTGATAAA
GAAACTGGCTTGCTTAAGGTATGGCTTTTATCAATGTTAAAAAATTTGAT
GTATTGATAATAACCATAGCAGAACATTTACTGGTATATCATATTAGTGT
TGCGAATCCTATGAAAATACCAAGCTTCAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035658XLOC_035658Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056624-exon-scaffold_277-1575043694:427694..427984TCONS_00056624-exon-scaffold_277-1575043694:427694..427984Clytia hemisphaericaexon
TCONS_00056624-exon-scaffold_277-1575043694:427140..427356TCONS_00056624-exon-scaffold_277-1575043694:427140..427356Clytia hemisphaericaexon
TCONS_00056624-exon-scaffold_277-1575043694:426780..426851TCONS_00056624-exon-scaffold_277-1575043694:426780..426851Clytia hemisphaericaexon
TCONS_00056624-exon-scaffold_277-1575043694:412503..412693TCONS_00056624-exon-scaffold_277-1575043694:412503..412693Clytia hemisphaericaexon
TCONS_00056624-exon-scaffold_277-1510915933:427694..427984TCONS_00056624-exon-scaffold_277-1510915933:427694..427984Clytia hemisphaericaexon
TCONS_00056624-exon-scaffold_277-1510915933:427140..427356TCONS_00056624-exon-scaffold_277-1510915933:427140..427356Clytia hemisphaericaexon
TCONS_00056624-exon-scaffold_277-1510915933:426780..426851TCONS_00056624-exon-scaffold_277-1510915933:426780..426851Clytia hemisphaericaexon
TCONS_00056624-exon-scaffold_277-1510915933:412503..412693TCONS_00056624-exon-scaffold_277-1510915933:412503..412693Clytia hemisphaericaexon
TCONS_00056624-exon-scaffold_277-1491911889:427694..427984TCONS_00056624-exon-scaffold_277-1491911889:427694..427984Clytia hemisphaericaexon
TCONS_00056624-exon-scaffold_277-1491911889:427140..427356TCONS_00056624-exon-scaffold_277-1491911889:427140..427356Clytia hemisphaericaexon
TCONS_00056624-exon-scaffold_277-1491911889:426780..426851TCONS_00056624-exon-scaffold_277-1491911889:426780..426851Clytia hemisphaericaexon
TCONS_00056624-exon-scaffold_277-1491911889:412503..412693TCONS_00056624-exon-scaffold_277-1491911889:412503..412693Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_277supercontigscaffold_277:412503..427984 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.165221	0	0	0	0	0	0.108088	0	0.471089	0.576506	1.05557	1.51604	0.623613	0.258943	0.66285	0.407009	0	0	0.879678	0.425252	0	0.862196	0	0.107729	1.33688	2.44734
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056624 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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