TCONS_00056652 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00056652
Unique Name	TCONS_00056652
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3459

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_279:34744..47911-

transcript sequence

>TCONS_00056652 ID=TCONS_00056652|Name=TCONS_00056652|organism=Clytia hemisphaerica|type=transcript|length=3459bp
aaagatatttttctgaCAATTTGAATTCTCGACAAGAAATACTTTTGAGG
AAGACCACATTATGAACGAAGAACAAATCGGTGAATATCGAGAagctttt
gaactttttgataagAATAACGATGGAAATATCAGCATCAAAGAATTAGA
AAAAGTTATGAATAGTCTGGGACAGAACCCATCAGAAGCTGAGCTCCAAG
ATATGATCAACGAAGTAGATTCGGACGGTAATGGAACGATTGATTTCCCA
GAATTTTTAAGCATGATGGCGCGCAAGATACGGGATACTGACACCGAAGA
AGAAATCAAAGAGgcGTTTCGAGTGTTCGACAGGGATGGTAATGGTTACA
TCAGTGCATTGGAATTACGACATGTGATGACAAACCTTGGTGAAAAGTTA
ACTGAAGATGAAGTGGATGAGATGATTGCAGAAGCGGATCAAGATGGAGA
TGGACAAGTTAATTATGAAGAGTTCACCAGACTGATGTTATCAACCCCAA
GATGACGAAAATGCTCATGAGGTCAACACATGGAAATACATCAACAGACA
AGCTAGGAAGATAGAAAAGAGACTGGGCGATAATCTATATTTCTAGTGTT
GTTTAATGTAAAATTCAAGAATATTGTACACATTATTATAGtgtattttt
tctcttttttagtaaAAGTTTCGGCGGGAAAAATTGTAAATGTATTTATA
AGAagatattaaaagaaaaatatttaaaatatttacaaacttacaaatag
tataaaacTCCCTCACATTATTAAAAGATTTTCAtcatttgatcaaaatt
tcacacccctgtctcgcagccccggtggagcttctTCTCACGGCGAAATT
CCAATaaagatagaaattctatttttccctgacacaggggtgtaattttG
TTACCTTTTTTCGATGTAATCAGTTCAATCGAAATGGCCTCAGTGTCGAC
CCCTGGGATAGGAAACTTAGGCAAATTAGGAAAGAGGTAGTGCGAGAGAT
AAGGTACCTTTTTGCACCAAGTACAAAAAACTTCCCTTTCTAATATAAGT
GTTCCAAAATGACGAAAATCGATTacattacttcgaataaacggtAACTT
TTTTAGATTGTCCcgtcgaataaacgcccctcattaaaggaaaagttttt
tatatGATGGCTCCCAAAATAAACGCCTCCTCTCTAGAAGGGACGTTTAT
CGGCTGAAATTGTGTCCACGAAGTATAAACTTTGACGTAGAACGCTTTTC
ATGCTATCTTCAATCATTAGAACTGCAACTAACTAGCTGTTTTGTTCGAC
ATTGCAGTTTTTGAGAGTTCCCTGGAGTTAGATTAAATTTTGGTCATGCA
AAGTTTGAAATTTATCGCTTGAATAGCGCTCTAAATCGAGATTTGAACTA
TATAGACACATTTTTGAACAACTCGGTGTTTAAAACATCAAGATTTAAGA
GAACTctcatattcatgatattcatgacgtaatgttttctacggaaatac
ctcggttttagccagtagtggcaaatttaaattagacaaaatttgtataa
aatttgccactacaaACCgggaaaacattacgtcatgaatatcatgaata
aaagaaaacttcAGTATTTATTGATTATTGTATCAAAGCAATCAAAGTGA
TTTTCATCTACTTCTACGTCTCTAAAAGGATATATTTGTACATTCCCACT
CGCCCTATCAAAGTGACTTTGGACGCCCTGGGCGTTTATTCGAGCTacta
cgaaaaaaaaaacagcaaaactttctctaagagtcattttattttttgag
attCAATGTCAATTTGATCAAATTCGCCATACTAATACAACCGGCCAACA
AAACCAAGTAAAAATTCAATGCAAATCTTTCAGATACTTCAAAGTGTTGG
TGTTGCTCAAAAGAAATGTTCGAATCTGATCCACCATCAGCCGTTTGAGG
GTTGTTATAGTCTGAATTTTTAAAACTATATAGTATAACAACTCCCAATG
AGAAAAATGTCACAAATCCTTGTATTAGAAATTGCCAGAGTCTTTGTCGA
CTGTTGGTGTAAATGGAATAAAGCAAATTGAATACTGACATCAAGTTTAT
GACGAGTCCACAAAACATAAAAACCCAACAAAGCATAAGCCATTCAGGTA
TCACGATTTCTTTTTCCGACATTACACCACCAAAAAGTTCAGCCGTTTTA
AAACAGCCTAAAATTTTATTAGTTTGAAGTTCTATATCGCAATATTTCCA
TATTCCAACATAAAGCCTTTGTTTAACACCATTATTCAAAGTCTGCATGT
TTTGAATAGACTTTGTGGTGTACATTGGTGTTGTTGTTACATGCGACCAA
TGAATATCCACTGACGAATGCATAAGTAAGCAAAAAGTACATGAAGTCCA
TACAAAAGCACAAACTGTGTTCTTTCTACAAGTTGACATTTGTTTAAAAG
ACATTTTCCACTTAAACCTTCTATAGATCGATTGAATACGGCGTAAAAAG
TGACAATTTTCTCTAGTACTATTCCTCCAAAATTGAATTTGAGGTTTTTC
ATTCGATTTTTGTAACATCGTTTGCGGCCAACTTCCACATCTTTATTGCC
TCTCTCTATATAAAATATATATGGAAAATTAAACTTCAACCATATACTTA
TAGATATGTtgttttacaaaaaagtaaagtatagatATCAATTATTATAG
TATATGGAATGTTGGAGAGAATGATCGATAGAATTTTTTATTACTCCAAA
CTGTCACAAATCTCCAGAAAGTGAAACTGAAAGTAGACAGCTCTCTCTGA
CTGGATAAGCGTCGAGGGGTTTTGTTCAATTTAGATATcgatgtaaaaga
tttcttatattgaatatttctctTGATGCGATGTGACGACGAAGGAGAAA
ATTCTAGCATAAAATGATAAGCTCCGgttatcaatattttaaatcATATT
GTTTGATAATTTGATGTCCTAGCGCCTGTTATATAACAAAGGATACATTT
TCGTTGATGATGAAGATTTCGGAAGCCGTGGCTTCATTTTGTGTCAAGTC
ATGCGCTACTAGGACGAACAAGTGTGTTGATATATGTAGACTATAACACA
GACTAAAACTTTGGAACTTTGCATTTGCTCAAATTGCATCACCAACCAAT
CTTTGACGATTTTTAACAGGCCCGGTGGGaacggggagactggggagact
tcaacCAAGGctattgagatttttttctcaaattcctagcgaattttatc
tcattttgagctttCAGCCTCCCCCTCtttaacggttgttccgccgggtt
TGTTTAAAGCCTTCACATCTTCGAATTCACACAAATTATAGCAAGTAAGA
GAAAAATACTGCAATGTGCTTTATTAGAACAATTTCATAACAACAACCAG
GCTCAATAACACCAGATAATAAGAATAATCTAAGAACAAATTTGAGTATG
GGATAGTCA

Run BLAST on NCBI

transcript from alignment at scaffold_279:34744..47911-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00056652 ID=TCONS_00056652|Name=TCONS_00056652|organism=Clytia hemisphaerica|type=transcript|length=13168bp|location=Sequence derived from alignment at scaffold_279:34744..47911- (Clytia hemisphaerica)
AAAGATATTTTTCTGACAATTTGAATTCTCGACAAGAAATACTTTTGAGG
TAATGTTCCTTGGTGCCACGTTGTTCTAGAGTTGATGTGTAATTTACCTG
GGAAACGTGATTCGTGTTGTTTTTTCTTTCTCTTTTGGAACTTTTTCCGC
CGTTTTGTTTTTAAATTTGAGCGTAAAATCTCCCTGCGAATGAATCGACT
GGCGATACAGTTGCAAAAACACTAAATTATGCCACTTCCGTTATGAAAGT
CCTTGTTTTTTGTTTATTTGGTGAGATTCTGGGATGACCGAAAACTCCAA
ATCTTTAAATTTTTACTCTGATTTAGATCACAATCCAAAAAAACTTAAAA
ATACCGGAAAATACATAAATTACCTTCGTGTTAATTAAGTAGTGATCATG
TTTTTGCAACAGCACGATCGATGTATAGGCCTTTTCATAAATTATTTTGA
GTGCAACAAGTGCCTCGTTTTAAAGCCATCACCAAGGTGATTAAATCGGT
CGAGTCTCCGGTGTTACTTTTAAAAGTAGAAATTTTTATCATGAACTCCC
CCCTAGTAATCAATTACAATAGCAATATTTTGAAAACGAAGAAAGCGCGT
TGGTCCCGATGTGATTTTATGAAAAGATCTATTGGTATCGAAGTTGTGCA
TTTATATATACGGGGTTTGCAAAAGAAACATGGCCAGACAAAAATTGTGT
TACTTGTAGAGCAGTTATTGCCTGAAAATTATATTTCTCTTTTTTTCATA
ACCTTGTTTGTTAGTTGGTACGGAACACATCACCATTCCTTCATCTTATT
CTTTGTTCTACTCTTTCCCATCCATAGGAAGACCACATTATGAACGAAGA
ACAAATCGGTGAATATCGAGAAGCTTTTGAACTTTTTGATAAGAATAACG
ATGGAAATATCAGCATCAAAGAATTAGAAAAAGTTATGAATAGTCTGGGA
CAGAACCCATCAGAAGCTGAGGTATGATTTTCCCAGATTTCCCAGCCTTC
CTCGTATCCTCGAACGAAAAGAGGTATATGAATTAAACATAGGCGAAGCG
AGAAACCTTGGAAAATTTCAGAGGGAGTGCAGACTTTTATGATATATTCA
TTATATTTTGATAAAACAAAGACAATAATTACAGTGTCGTTAAAACCGCT
CTCATCCATAAATTTTACAGGATCTCGCTACGCCTATGATTGTAAACTAA
ACTATGCATTAGTTTGATCTTTAATAAATCAAAGAATTCTAGACAGGTCA
AAATAGCACCGAAAAGAACAATATAAAGCAGAATTAATGTACTGAAAAAC
TAAAGAGTCACTTTAAAAGTGTGATAAATGATTATTGCCACACTTACGAG
GAATTACATGTGCATGCATTTCTTCTTGGGCTTGTGCTATCTTGAGCCTC
TCTTCTATGCCTCTTGAGATCGAATCAAACCTCTTAGTCTCTCAGATCGC
TTTTTTATGGTTCTGATAGTGCTCACCAAAATTGTACCATCGTCCTTCAG
TAAAATCAAAAAGTGGTGAAAGTAAGATCAAACAAGAAAATTTCGAGTGT
ATTTTTGATAGCTATTCCTTTTTTTACCAGCTCCAAGATATGATCAACGA
AGTAGATTCGGACGGTAATGGAACGATTGATTTCCCAGAATTTTTAAGCA
TGATGGCGCGCAAGATACGGGATACTGACACCGAAGAAGAAATCAAAGAG
GTAACTCTCATTGACTTTTACATAAAAAAGGAAATCATTTTTGCTGAAGA
AATTTTTCTTCAAAATAAATGAACCAGTTTTCATTTACAAATCCCTATTT
GCCTTCAAAGAGACGAACAGGTTTACTTTCAAAAATACATGAGCAGATTT
ACTTTCACAAATGCGTGAGAGGATTTTCCTTCACAAATACATCGACAAAT
TTTCCTTCAGAGACACAAAACTACTTATCCTGCGAAGACAATGAAAGACT
TCTTGAATCCTTAAAAAAGTTAATTTAATGCAGTTGATCAAAGCAAGCAC
AAAAGTCAGAGGTTTTCCTTGCAAATGAAAAATTTACTTTGGCGAATTCT
AGATTCTATAAAAGTGAATTCTTAGCAAGTCTAGTGTATTGATTAGGGCG
AATATGTATTTGATGCGGCGAACCGAACTTTTAGACCTGTGAAAAGTAAT
TTTTTTCGTGTCTAGGACCAGCAAACTTCGCTGTTCACCAGACTTAAAAG
ACGCCTGCATATTCTTTCATTTTTCCAGGCGTTTCGAGTGTTCGACAGGG
ATGGTAATGGTTACATCAGTGCATTGGAATTACGACATGTGATGACAAAC
CTTGGTGAAAAGTTAACTGAAGATGAAGTGGATGAGATGATTGCAGAAGC
GGATCAAGATGGAGATGGACAAGTTAATTATGAAGGTCTGTTCCTCCTTT
TGTTTCTTTCTTTTATTTCCTAGACTAGAGGATATTTCTAATTATTTTAA
TAGAAAGAGACATCTGAGCTAACTGATGCTTAGGTCCCTCTAAGTATCAA
AAGTTTAATAAATCACCCATTACCATCTAAAGTCTATTCACGATAAGTGT
GCACTCTTTTTTCTTTTACCTATAACTTTTGAAGGAATTCTTCAATCTTT
ATAAATTTGGTATCGTTGGAGAGATATTTGTGAGTGGAACAATTTGAAAT
AAAAAGATCTTCAAAAGAATTCTAAAAATGAAGATGAAAATGAAGAAGAA
AAAAATGAAGATCTTGTAGAAAAGTGCTATAACTTTCATTTTCACTGGAG
AGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCAATACAAAGTTATGATACAAAGTTGATAAGTGATTGACCCCAAAA
AACAGCAGAAAACAGCAGAAAACAGCGTTTTTAGACGTCAATTAGCTTAT
AACTTTCTTTGATATCTTTTGACTGAATGATTATTTCTGAGAAATTTTTT
CACAGTGATGACGTTCGATGATTAAGGATTTACTTCAGTAAAAATGATAG
TTGTAGCACTTTTCTATAAGATCTTCATTTTTTTCTTTTTCATTTTCATC
TTCATTTTTAGAATTTGNNATCTTTCCAATGATACCAAATTTATAAAGAT
TGAAGAATTCCTTCAAAAGTTATAGGTAAATGAAAAAAGAGTGCACACTT
ATCGTGAATAGACTTTAAAAACTTGATTTCATCGTGAACATTGTTGAAAT
CAAAGGTTTAACTTTGAAAATTGTGAACGATTATCCTGATGATAGTGGAT
CACATTATTTCTCACCAGATTGCTTGTAAAAATTTTCAAATTTGATAAAG
TACTTGTTTCATATTGCAGTAGTTTTGAGATGACTAAAATTTGGGATATT
TTGGCTCATTGACTTAAAAAACATCTAAAGTTTGTTCCAAAAGATTGACA
TTGCACTGCATTTGAAATAAAGAATTCAAAAATTTCGAAAATGAAGATGA
AGAAAATGATGATGAAGAAAATGAAGATTCTTTCTACTTGCTCACAAATT
TTGAATTCATACTTTTCTGAAACTTTGAACTTGATTGCTGATTTCAAATA
TGTTTTCAGATACTTTATAGGTATCTTTATTAGATAAAAAATTACAGCCC
TCCGAAGTGGTTCCATTTTTAGCCATTTTAAGCCTATTTCGAAGGGCTTT
TAATACCTTAAGGGAACTCATTTTGGCGGAATTAGTTCCCGCCAAATTAT
TATTATTCTACATCCAAATACGCTTCCAAAAATGTATAGTTTGTTATGGT
TTAGGGGCTGGAACTGGGGCGGAAAAATTAATGCAATTCTGGGACATGCA
TTAAGTTACCCGAGCCAGGGTTCAGGTACCCCCCACCATTTTGTTACCCC
CAAAATTTTCAGAATTCTAAAGTAGCCCCCTACTTTGAGTTTTTTATTAA
AAATGCAATAAAGAATTTTCTGCTCTTTTGTCACTCCTAGGAAAATACTT
CAATGGTGAGCATCCCTTCGTTTTTTAACAAATTCAAGGGTTTCTAGAGT
TTTTAGTTGATCTTTGCTAGTTTTAAAGGATTTCAAGAAGAAGTCTGTCG
ACAATAAGAGAAAGGTTGAATTTTCAAATCTCAAGGTTGAATCCTCAACT
CCCTTAAAATGCATAAAAAACCCCTAAGACGTTTTCTTTAACAAAATCAA
TTTAGGAATACTTCCAGGTCTGGCTTTTTAAACACTTTTTTTTTGAGGTA
CCCGCATTTACAAGTACTCTTAGGTGCCAAATAAACGGGGGGGTTGGAAT
AAACGGGGGGGTTGGAAAATTTTTGAAATTTCAATAAACGGGGGGGACCT
AATTGCCGGGGGGGGGTGGAAATTGTACTTATGAAAACCCCAAAATAAGG
GAAATATAGGCTAAAATCAGGCTTTTTGGACCAAAATAAGGGGACTTCTT
TTAGCCAACTGAAAATATTCTTTAAAATTAATAAACGGGGGGGGCCTAAT
AAGGTCCGGGGGGTTGGAAAATTTTTGAAATTTCAATAAACGGGGGGGAC
CTAATTGCCGGGGGGGGGTGGAAATTGTACTTATGAAAACCCCAAAATAA
GGGAAATATAGGCTAAAATCAGGCTTTTTGGACCAAAATAAGGGGACTTC
TTTTAGCCAACTGAAAATATTCTTTAAAATTAATAAACGGGGGGGGCCTA
ATAAGGTCCGGGGGGTTGGAAAATTTTTGAAATTTCAATAAACGGGGGGG
ACCTAATTGCCGGGGGGGGGTGGAAATTGTACTTATGAAAACCCCAAAAT
AAGGGAAATATAGGCTAAAATCAGGCTTTTTGGACCAAAATAAGGGGACT
TCTTTTAGCCAACTGAAAATATTCTTTAAAATTAATAAACGGGGGGGTCC
TAATAAGGTCCGGGGGGGTTGGAAAATTTTTTCGAAAAATTAACAAGCGG
GGGGACCGTTTATTTGGCACCTAAGAGTACTTCTCTTGGGATTGGCTTAA
AATTTAAACGATTTTTAAAGATTCAAAAAGTAAACAAACAGACTAATTTC
TTAACGTAAGTTTAAGTAAGAAACAATGGAAAGAAACAAAAGGCTTCCAA
GGCCAGGGTTTCTTATAGGGGCTATGGTATATCTTATTACACAAAATCAA
CTAGACATGGTTTGCACTAAAATGCTACCGTTATAATAGCATTTTATAAG
TTAACATGCTTAATATTGTACATAATTCCTTGTTTGTTCTGTCTGTAAAA
ACTGCACTTTTTTCCCATAAGAAAAATTTTATAAGAACAACGAGGCTCAA
AATCGCCAAAAATAGGAACAATTTAAGCATAATGCTGAGCCTGAAATTTA
GAGGTTAAAGTAGTAAAAATTGGGTAGAACGCCTTAAATACCTCGATTAC
ACCTTGTAAAAAAGTACAGGATAAAGCGATAAAGTGATAACCCAAAGTTA
TATGACCGTCTATCAAGAGTTATAAATTTGATTCTTATAAAGTAGATGCC
TGTAAGAAATATACAAATATGCTCATATTACGCGTCCTCCCTTCTTCACT
TTGTAAAAACAAAACCACTTTCATTTTCATGAAGAGAAATTCTGTCTATT
TTAAAGGAATCCCTTTATAAAGTTGAAAGACTCACTTTGCTCAATCCTTG
AAGTACAGATTCCGGTTTTGGCTCATCTCCAGCCATTTTCCAGACAGAGC
ACGTTTGATCATCGTTGTTGCGTAATACGGTCAATCGCTGAAAGAATTTT
AGGTATTTTAGTTTTTTATTTCGATTTGGTTATATCGCTAGCAGATGATT
TTTTATGAAAGATAGAAAAACAAATTTCTTAACAAAAAATGGAGCAGTAT
ATAGGAGAAGAGGTATCCGCCAATTAAAATAATTTCTGTCCCAAAGAAAA
TGGGAAGATTGTTTATTTTAATGTGTTATTCTTGAAGAAAAGAGTAATGT
GTCGTTGGAAGATGATTTTAAGTGAATTCAAGGCTAAATTGAAAAATTTT
CGAAGAAAAGAATCATTGAATGATATGATTTTTAGAAAAATTCTTCATTA
TCTACACATTTCTTCTTTATTTCTAGCTTTCTTAAAAATCAAAATTATTC
TCCTTGAGAATATCAACGGTATACACGTTGTTTTTTTTATAAGGAACACG
TTTATAAGGAACTCGAGGCTGAAAATGGTTCAAAAAATAAGGAATTGTTA
AGGAACTGCTCAGGCTGAGAATAAGTGGATTTGAAAATAATGTACCTTAT
TGGGACTAACTTGACCAAATTTTGATCTTTCAAGGGGCAAAAAGTTCAAA
ATTTCCTATGTAGTAAGGAACTCGATAAGGAACTTTGAGACTGAAATTCT
CTGTAAAAATAAGGAACTCCAGGCTCAGAGCAAAGTTAAGGTTCCTTATA
AAAAAAAAACGTGTATAACTTTTCAATAAAGAATAAATGGTTACTGATAA
ATTGTTAAAAGCTTTGTGTCCTCGTGCTTTTGAGATTAGGATTCGTTAGG
ATCGAAAATTAAGTAAATGTACCCAGCATCTTTAAAAAGAACTTACATTT
TTGAAGTCCTCCATGTAAGTGACATGAGGCCGGCCTTCATGGTGAGGAAC
GTCGTAGATCACAATGTTGTTCTTTTTATCCACAGAGATCTTTTCTTGGT
AATTGTGACCATTCTCGGTAAACGCCAAATTGTGTGTTTGACACTGTTAA
AAGATATCAAAAAATAGACCTTTGTATAAATTACGTCACGAGCAACGCTG
ACCTCGTTTTCAAGATATTGCTATGGTAATTGATTCCCAAATAACTTCAT
AAGAAGATAACTCTATTTCTAAAAGTAACACTTGAATATTCAAGGGATTT
AATCGCCTTGTTAATGGCTTCAAAACGAGGTAGTGTACAGTTGCGATCAA
TAATAATTTATGAAAAGGCCTATTGACATATCAATCCGATGTTTGCGAAC
ACGGTGACTTGGAGTGAGCTAAAAATTATGAGACCACTACGTTTAGCTAT
TTTAAAGATTCTTTTCTGTCTTTAGCTTTAATTTCAGAAAACATTCTTGT
TTAGCTAATCAATAGTAAACGCGATATGCCAATCCGGGTTGTATTTTTCT
ATCTAAGCAGCTTTAAGTCGCACACAGAATAAAGGAAAACATACCTTGAT
AGCGACCAGACTTGCTAGCGCCAACACGACAAAGTTCAACAAAATCTAAG
AAGAAAACAAGATACGATATACTCGCAAAGGACTAAAAATATTCCCGAAA
AGGGCTGGTTAGCATACAATACCCATAAAGAGGCCCATCTTATTCTGGTT
AAAATATAGAGATAGTTGTTGAGTAGTTTAAGTCACGCCAACTTAATAAT
TCCAAAGTTTAGAAAAAACAATGTATTTTATATTCGACTTTATCTCTAGA
GTGCTTTACTTACATTCATCTTGAGTTTTCTTCAATGTTTCTTCTTTTTG
AAATTTCTTCCAAAACTTGTTGATGGTGGTAAGAGAAGAAACTGGGTGTT
TTATAGGGATCTGTAAGCACCGGATTGGCAACTAATCTAGAAAAATATAT
TCCCATTCGTCAACTATACTGGAAAATGACTAGTCATTTTTCAAAAAAAC
ACTTCAAAGTATTGTTTAAACATCTGAACAAATTATTTTTTTCTCTGAAA
TGGATAGTGGGTTGAATATTTTTCTGGAAACTTACTCGAGTGAGTTACAA
TCCCGTTGGGAGGGGGTACTCCAGTTGGCAGATGACGGGTACGTGCAGAC
GGAACCTTCCAAAACCTACCCTTAGAGAGACTAATTTTTTGCGAAAAACT
GACCCTTAGAGTAACATTTTTAAAACAATTTCTTCGATTTTCAAATAGTT
TTCTACTCTTAAAGAGATTATTTTGCAATTTCTTCTCTTGAAACTAAAAT
ATTTCTCTAAATATATAAAATCACAAAAATTACAAGTACTGTGATCTTGA
AGTTTTTACCAGTGATAGTTTGTTCACGAAGGCTGATACGTCTAAAAAAG
AGTCAGTCTACTGTCTCATAAGTATGTTATTTTATCATAACTTTTGGTCT
GACCAGACTTTGAGCTTGCATCGTCATTAAGGAAAGGTTGCTTTACTATC
TTGTATATTTTTTTCCAATCTAATTTGGGTTTCATCAAAAGTTACAGCCA
TCCAATCTTCGCTGCAGATTATGCTGAGACAGATCCAAGGCGATGCTATC
GTCCGTTAGAGGGTCAGCAAACGAAATTTTTCAATTCTGGAATACAGTAA
AATAGGGGTGGTTTGGGCGCGAAAAGGGCAATTTGGGTCTGTAAAATTCA
CGATATTCTTCAAAAGCTTATCATGAAATTGCGTCACAAAAAAGCTCGTG
GAGATTTTTACACCCCCTTCTCACAGACCCGGTAGGATTTTTTTCAGCCA
GTGGGGTTAAAAATAACGGACCAAAACTTTTAAGGCTGGGGTTTTGAGTT
CCATTGTTTTCAAGCCATAAAATTCAGTAGTTGGAGTGAGGATTCACTTA
CCTTATCACGGAAAAAAGAGTTTTATTTAGTCGGGGTTTTTTTCCTTCGG
GGAAAGATTTCGTCACTTTCCCCCGATCAAAATTTCAAATTCGTCACTTT
TCCCTGACGAAATTTACAATTTAGTTACTTCAAGTTACTTTAGTTACCCA
ACTAAATTCCTTCACTAGCTCGAAAAAAGGTCTTTTAATTCGACGTTTAA
AGCACTAATTTCGGTTAATAAACGTGTAAAAAATTTAGATTTTAATTTAG
CTTGGGGTTTAAAAAATCGGATAAACGTTTTGGTCAGGGATAAAAAAATC
GGGTAAAAGTTTTGGTCGGGTGATTAAATATCGGGGAAAAATTCGTCGGG
GGAAAATTTCGTCACGTCCTCAAAATTTTCATCACTTTCCCCCGACATTG
TTTTCCCCGATAAGGTATCTGATTGTTTTCAGCTGGGACAAAAATTGGAG
TATACTTTTCCACTGAAGACGATAATTTGGCCAATTTTTCCAGTCAAAAG
GGTTCCCATTGGGTCTGTGAGAAGAAGTGTATCTTTTTCGGCGCTGCATT
TTCAGTTATCGCTTACTTAAGGTCAATATGCTTGGGGATTCAAGTAATTG
CTTTAAAGTTTTTACCTCGGGAAACAAAAGGTGTAACCAGGATTAATTTT
TACGATTTGGCCAATTTTTCACCCTGATATTCTTATAGAAGATATTCTTA
TACAAAAAAACGTGTATATCGATATGCTCAATTGAAAATGAACCCAATTT
CGTACCCAGAGCTACTTGTACCACTTTTTGATTTTACTGATGAACGTGAT
TTAACACCCCTGTCTCACACCCCCGGTGGAACTTTTTCACTCAATGGGGG
ATAAAAACTCCTGTTGAAATCTCAATGGGGATAGAAATTCTATTGTTTCA
AGGTTAAAAATCCAGTGAGGATGGGTTTGGAGTGTAATTTTCAAACATTG
AATTTCGAATGGGGATGAAATCAAAGTCAATTTCCAAGTGGGGCTGATAT
TTTAGGGTATTTTCCCACCAAAGAGACGAAATTTTTGTCAAATTTTTCAG
TGGGGCTGAGGTCCCAACGGATTTGTGACAGGAACGTGATAGAATTCATT
AGCGCTATCAGAATCATAAAAAGCGAACTATAAGAATGGGTTCGAGTTTG
GAATGAAGTTAGTTAAATAAAAAAGAATAAGTGCAAGAAGCTGAGAAAAC
ATATTTGTTTTACGTAGGTTAGAGGACCTCTTGAAATCTCTTTAAGATTT
TCAGCAAATAAAGATCTTAATGGCCGTATTTTTATGCAACGTATCAGATT
TTACCAAAGTCAAAATGGCCGAAATTGCGTCGAGCACTATGATGCAAATT
GTATATTTTATGATTTTTTTCTTTCAAAAAAAGTGTTCTAAATATTGGAT
AGAGAAACATTTTTGTGAGATTAAATCAACCTTTTGGTCGTTTGCTTGAC
AGATTTTCACTATTCAAATCTCTCGAAAAATCTTTGGCGGGCGCATGCCC
ATTTCTCGAGACAGTCAATGTCAACGACATCAAAATGTGGCTATAATGTA
ATAATGTATTTACCACTTTTTATCTACAGAGTTCACCAGACTGATGTTAT
CAACCCCAAGATGACGAAAATGCTCATGAGGTCAACACATGGAAATACAT
CAACAGACAAGCTAGGAAGATAGAAAAGAGACTGGGCGATAATCTATATT
TCTAGTGTTGTTTAATGTAAAATTCAAGAATATTGTACACATTATTATAG
TGTATTTTTTCTCTTTTTTAGTAAAAGTTTCGGCGGGAAAAATTGTAAAT
GTATTTATAAGAAGATATTAAAAGAAAAATATTTAAAATATTTACAAACT
TACAAATAGTATAAAACTCCCTCACATTATTAAAAGATTTTCATCATTTG
ATCAAAATTTCACACCCCTGTCTCGCAGCCCCGGTGGAGCTTCTTCTCAC
GGCGAAATTCCAATAAAGATAGAAATTCTATTTTTCCCTGACACAGGGGT
GTAATTTTGTTACCTTTTTTCGATGTAATCAGTTCAATCGAAATGGCCTC
AGTGTCGACCCCTGGGATAGGAAACTTAGGCAAATTAGGAAAGAGGTAGT
GCGAGAGATAAGGTACCTTTTTGCACCAAGTACAAAAAACTTCCCTTTCT
AATATAAGTGTTCCAAAATGACGAAAATCGATTACATTACTTCGAATAAA
CGGTAACTTTTTTAGATTGTCCCGTCGAATAAACGCCCCTCATTAAAGGA
AAAGTTTTTTATATGATGGCTCCCAAAATAAACGCCTCCTCTCTAGAAGG
GACGTTTATCGGCTGAAATTGTGTCCACGAAGTATAAACTTTGACGTAGA
ACGCTTTTCATGCTATCTTCAATCATTAGAACTGCAACTAACTAGCTGTT
TTGTTCGACATTGCAGTTTTTGAGAGTTCCCTGGAGTTAGATTAAATTTT
GGTCATGCAAAGTTTGAAATTTATCGCTTGAATAGCGCTCTAAATCGAGA
TTTGAACTATATAGACACATTTTTGAACAACTCGGTGTTTAAAACATCAA
GATTTAAGAGAACTCTCATATTCATGATATTCATGACGTAATGTTTTCTA
CGGAAATACCTCGGTTTTAGCCAGTAGTGGCAAATTTAAATTAGACAAAA
TTTGTATAAAATTTGCCACTACAAACCGGGAAAACATTACGTCATGAATA
TCATGAATAAAAGAAAACTTCAGTATTTATTGATTATTGTATCAAAGCAA
TCAAAGTGATTTTCATCTACTTCTACGTCTCTAAAAGGATATATTTGTAC
ATTCCCACTCGCCCTATCAAAGTGACTTTGGACGCCCTGGGCGTTTATTC
GAGCTACTACGAAAAAAAAAACAGCAAAACTTTCTCTAAGAGTCATTTTA
TTTTTTGAGATTCAATGTCAATTTGATCAAATTCGCCATACTAATACAAC
CGGCCAACAAAACCAAGTAAAAATTCAATGCAAATCTTTCAGATACTTCA
AAGTGTTGGTGTTGCTCAAAAGAAATGTTCGAATCTGATCCACCATCAGC
CGTTTGAGGGTTGTTATAGTCTGAATTTTTAAAACTATATAGTATAACAA
CTCCCAATGAGAAAAATGTCACAAATCCTTGTATTAGAAATTGCCAGAGT
CTTTGTCGACTGTTGGTGTAAATGGAATAAAGCAAATTGAATACTGACAT
CAAGTTTATGACGAGTCCACAAAACATAAAAACCCAACAAAGCATAAGCC
ATTCAGGTATCACGATTTCTTTTTCCGACATTACACCACCAAAAAGTTCA
GCCGTTTTAAAACAGCCTAAAATTTTATTAGTTTGAAGTTCTATATCGCA
ATATTTCCATATTCCAACATAAAGCCTTTGTTTAACACCATTATTCAAAG
TCTGCATGTTTTGAATAGACTTTGTGGTGTACATTGGTGTTGTTGTTACA
TGCGACCAATGAATATCCACTGACGAATGCATAAGTAAGCAAAAAGTACA
TGAAGTCCATACAAAAGCACAAACTGTGTTCTTTCTACAAGTTGACATTT
GTTTAAAAGACATTTTCCACTTAAACCTTCTATAGATCGATTGAATACGG
CGTAAAAAGTGACAATTTTCTCTAGTACTATTCCTCCAAAATTGAATTTG
AGGTTTTTCATTCGATTTTTGTAACATCGTTTGCGGCCAACTTCCACATC
TTTATTGCCTCTCTCTATATAAAATATATATGGAAAATTAAACTTCAACC
ATATACTTATAGATATGTTGTTTTACAAAAAAGTAAAGTATAGATATCAA
TTATTATAGTATATGGAATGTTGGAGAGAATGATCGATAGAATTTTTTAT
TACTCCAAACTGTCACAAATCTCCAGAAAGTGAAACTGAAAGTAGACAGC
TCTCTCTGACTGGATAAGCGTCGAGGGGTTTTGTTCAATTTAGATATCGA
TGTAAAAGATTTCTTATATTGAATATTTCTCTTGATGCGATGTGACGACG
AAGGAGAAAATTCTAGCATAAAATGATAAGCTCCGGTTATCAATATTTTA
AATCATATTGTTTGATAATTTGATGTCCTAGCGCCTGTTATATAACAAAG
GATACATTTTCGTTGATGATGAAGATTTCGGAAGCCGTGGCTTCATTTTG
TGTCAAGTCATGCGCTACTAGGACGAACAAGTGTGTTGATATATGTAGAC
TATAACACAGACTAAAACTTTGGAACTTTGCATTTGCTCAAATTGCATCA
CCAACCAATCTTTGACGATTTTTAACAGGCCCGGTGGGAACGGGGAGACT
GGGGAGACTTCAACCAAGGCTATTGAGATTTTTTTCTCAAATTCCTAGCG
AATTTTATCTCATTTTGAGCTTTCAGCCTCCCCCTCTTTAACGGTTGTTC
CGCCGGGTTTGTTTAAAGCCTTCACATCTTCGAATTCACACAAATTATAG
CAAGTAAGAGAAAAATACTGCAATGTGCTTTATTAGAACAATTTCATAAC
AACAACCAGGCTCAATAACACCAGATAATAAGAATAATCTAAGAACAAAT
TTGAGTATGGGATAGTCA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_035681	XLOC_035681	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_279	supercontig	scaffold_279:34744..47911 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0.170174	0.137395	0.177189	0	0.13745	0.63932	0	0	0	0.161744	0	0	0.192241	0.130159	0	0.265863	0	0	1.13936	0	0	0.177739

Blast

[Close]

BLAST of TCONS_00056652 vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 3.319e-71
Identity = 112/144 (77.78%), Postives = 130/144 (90.28%), Query Frame = 2

Query:   62 MNEEQIGEYREAFELFDKNNDGNISIKELEKVMNSLGQNPSEAELQDMINEVDSDGNGTIDFPEFLSMMARKIRDTDTEEEIKEAFRVFDRDGNGYISALELRHVMTNLGEKLTEDEVDEMIAEADQDGDGQVNYEEFTRLMLS 493
            + EEQI E++EAF LFDK+ DG I+ KEL  VM SLGQNP+EAELQDMINEVD+DGNGTIDFPEFL+MMARK++DTD+EEEI+EAFRVFD+DGNGYISA ELRHVMTNLGEKLT++EVDEMI EAD DGDGQVNYEEF ++M +
Sbjct:    5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148

The following BLAST results are available for this feature:

BLAST of TCONS_00056652 vs. Swiss-Prot (Human)

BLAST of TCONS_00056652 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CALM3	3.319e-71	77.78	Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1	[more]

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TCONS_00056652 (transcript) - C. hemisphaerica