TCONS_00056653 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00056653
Unique Name	TCONS_00056653
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3611

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_279:34744..49664-

transcript sequence

>TCONS_00056653 ID=TCONS_00056653|Name=TCONS_00056653|organism=Clytia hemisphaerica|type=transcript|length=3611bp
TCAATCAATACATTGTCAATCGGGTGACGGACAGGGATCTGGTTTTATTT
TGAAcgtattttaaaattggttaGAAATTATGTAAATGTATGTTAGAGAC
TTCGATTTGAACGATTTTGAAGGCTTTCCTGTGTGTGCGATCAacgttga
ggatattgattgaattttaagaaacacaccaaaatggctAGCCAATTTGA
GGAAGACCACATTATGAACGAAGAACAAATCGGTGAATATCGAGAagctt
ttgaactttttgataagAATAACGATGGAAATATCAGCATCAAAGAATTA
GAAAAAGTTATGAATAGTCTGGGACAGAACCCATCAGAAGCTGAGCTCCA
AGATATGATCAACGAAGTAGATTCGGACGGTAATGGAACGATTGATTTCC
CAGAATTTTTAAGCATGATGGCGCGCAAGATACGGGATACTGACACCGAA
GAAGAAATCAAAGAGgcGTTTCGAGTGTTCGACAGGGATGGTAATGGTTA
CATCAGTGCATTGGAATTACGACATGTGATGACAAACCTTGGTGAAAAGT
TAACTGAAGATGAAGTGGATGAGATGATTGCAGAAGCGGATCAAGATGGA
GATGGACAAGTTAATTATGAAGAGTTCACCAGACTGATGTTATCAACCCC
AAGATGACGAAAATGCTCATGAGGTCAACACATGGAAATACATCAACAGA
CAAGCTAGGAAGATAGAAAAGAGACTGGGCGATAATCTATATTTCTAGTG
TTGTTTAATGTAAAATTCAAGAATATTGTACACATTATTATAGtgtattt
tttctcttttttagtaaAAGTTTCGGCGGGAAAAATTGTAAATGTATTTA
TAAGAagatattaaaagaaaaatatttaaaatatttacaaacttacaaat
agtataaaacTCCCTCACATTATTAAAAGATTTTCAtcatttgatcaaaa
tttcacacccctgtctcgcagccccggtggagcttctTCTCACGGCGAAA
TTCCAATaaagatagaaattctatttttccctgacacaggggtgtaattt
tGTTACCTTTTTTCGATGTAATCAGTTCAATCGAAATGGCCTCAGTGTCG
ACCCCTGGGATAGGAAACTTAGGCAAATTAGGAAAGAGGTAGTGCGAGAG
ATAAGGTACCTTTTTGCACCAAGTACAAAAAACTTCCCTTTCTAATATAA
GTGTTCCAAAATGACGAAAATCGATTacattacttcgaataaacggtAAC
TTTTTTAGATTGTCCcgtcgaataaacgcccctcattaaaggaaaagttt
tttatatGATGGCTCCCAAAATAAACGCCTCCTCTCTAGAAGGGACGTTT
ATCGGCTGAAATTGTGTCCACGAAGTATAAACTTTGACGTAGAACGCTTT
TCATGCTATCTTCAATCATTAGAACTGCAACTAACTAGCTGTTTTGTTCG
ACATTGCAGTTTTTGAGAGTTCCCTGGAGTTAGATTAAATTTTGGTCATG
CAAAGTTTGAAATTTATCGCTTGAATAGCGCTCTAAATCGAGATTTGAAC
TATATAGACACATTTTTGAACAACTCGGTGTTTAAAACATCAAGATTTAA
GAGAACTctcatattcatgatattcatgacgtaatgttttctacggaaat
acctcggttttagccagtagtggcaaatttaaattagacaaaatttgtat
aaaatttgccactacaaACCgggaaaacattacgtcatgaatatcatgaa
taaaagaaaacttcAGTATTTATTGATTATTGTATCAAAGCAATCAAAGT
GATTTTCATCTACTTCTACGTCTCTAAAAGGATATATTTGTACATTCCCA
CTCGCCCTATCAAAGTGACTTTGGACGCCCTGGGCGTTTATTCGAGCTac
tacgaaaaaaaaaacagcaaaactttctctaagagtcattttattttttg
agattCAATGTCAATTTGATCAAATTCGCCATACTAATACAACCGGCCAA
CAAAACCAAGTAAAAATTCAATGCAAATCTTTCAGATACTTCAAAGTGTT
GGTGTTGCTCAAAAGAAATGTTCGAATCTGATCCACCATCAGCCGTTTGA
GGGTTGTTATAGTCTGAATTTTTAAAACTATATAGTATAACAACTCCCAA
TGAGAAAAATGTCACAAATCCTTGTATTAGAAATTGCCAGAGTCTTTGTC
GACTGTTGGTGTAAATGGAATAAAGCAAATTGAATACTGACATCAAGTTT
ATGACGAGTCCACAAAACATAAAAACCCAACAAAGCATAAGCCATTCAGG
TATCACGATTTCTTTTTCCGACATTACACCACCAAAAAGTTCAGCCGTTT
TAAAACAGCCTAAAATTTTATTAGTTTGAAGTTCTATATCGCAATATTTC
CATATTCCAACATAAAGCCTTTGTTTAACACCATTATTCAAAGTCTGCAT
GTTTTGAATAGACTTTGTGGTGTACATTGGTGTTGTTGTTACATGCGACC
AATGAATATCCACTGACGAATGCATAAGTAAGCAAAAAGTACATGAAGTC
CATACAAAAGCACAAACTGTGTTCTTTCTACAAGTTGACATTTGTTTAAA
AGACATTTTCCACTTAAACCTTCTATAGATCGATTGAATACGGCGTAAAA
AGTGACAATTTTCTCTAGTACTATTCCTCCAAAATTGAATTTGAGGTTTT
TCATTCGATTTTTGTAACATCGTTTGCGGCCAACTTCCACATCTTTATTG
CCTCTCTCTATATAAAATATATATGGAAAATTAAACTTCAACCATATACT
TATAGATATGTtgttttacaaaaaagtaaagtatagatATCAATTATTAT
AGTATATGGAATGTTGGAGAGAATGATCGATAGAATTTTTTATTACTCCA
AACTGTCACAAATCTCCAGAAAGTGAAACTGAAAGTAGACAGCTCTCTCT
GACTGGATAAGCGTCGAGGGGTTTTGTTCAATTTAGATATcgatgtaaaa
gatttcttatattgaatatttctctTGATGCGATGTGACGACGAAGGAGA
AAATTCTAGCATAAAATGATAAGCTCCGgttatcaatattttaaatcATA
TTGTTTGATAATTTGATGTCCTAGCGCCTGTTATATAACAAAGGATACAT
TTTCGTTGATGATGAAGATTTCGGAAGCCGTGGCTTCATTTTGTGTCAAG
TCATGCGCTACTAGGACGAACAAGTGTGTTGATATATGTAGACTATAACA
CAGACTAAAACTTTGGAACTTTGCATTTGCTCAAATTGCATCACCAACCA
ATCTTTGACGATTTTTAACAGGCCCGGTGGGaacggggagactggggaga
cttcaacCAAGGctattgagatttttttctcaaattcctagcgaatttta
tctcattttgagctttCAGCCTCCCCCTCtttaacggttgttccgccggg
ttTGTTTAAAGCCTTCACATCTTCGAATTCACACAAATTATAGCAAGTAA
GAGAAAAATACTGCAATGTGCTTTATTAGAACAATTTCATAACAACAACC
AGGCTCAATAACACCAGATAATAAGAATAATCTAAGAACAAATTTGAGTA
TGGGATAGTCA

Run BLAST on NCBI

transcript from alignment at scaffold_279:34744..49664-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00056653 ID=TCONS_00056653|Name=TCONS_00056653|organism=Clytia hemisphaerica|type=transcript|length=14921bp|location=Sequence derived from alignment at scaffold_279:34744..49664- (Clytia hemisphaerica)
TCAATCAATACATTGTCAATCGGGTGACGGACAGGGATCTGGTTTTATTT
TGAACGTATTTTAAAATTGGTTAGAAATTATGTAAATGTATGTTAGAGAC
TTCGATTTGAACGATTTTGAAGGCTTTCCTGTGTGTGCGATCAACGTTGA
GGATATTGATTGAATTTTAAGAAACACACCAAAATGGCTAGCCAATTTGA
GGTAATGTCAAATTTTTATTGGAGTTTCATTTTAGAATAAAGTATTATCG
TTACTCTACACCTCGAGTGTTTTATTAACAAATATTTTATCTTTCTCAAT
TACCAAAGTTGATTATATATTTTATACTATACTGGGCGAAATAAGAGATT
TCCAATCCTGGAAATATCTTGAAAATATGATAATTCCATATACTTTTGTA
AATATGGAAATATGACTGTTCTATATTTCCAAAGTTGTAGAAATACCATA
TTTCATGATATTTCCAAATCTGAAAAATCATATTTTCAAAATATTTCCAA
CTTTTGCAAATATGATATTTCCAAAATTGGAAATATCTTGAAAGTACCTC
ATTGGAACTAATTTTTGCGGGAATTAATTTTTGAGTTTTTCGCGGTTTTT
CGTCAAAATCGCGAAAATTTTAACCTGCGAAAGATTTTGAGAGTTAAAAA
CCGCGAAAATTAAAACCCGCGAAAATTTCAGAATGAAAGAAACTGCGAAA
ATTAAAACCCACGAAAAGCAATTTTTCGGATATTTTTTTTCGACCGCGAA
AATTAGTTCCAATAAGGTATGTTTGAATGAATTTCAGAATTGGAAATATC
ATGAAATATGATATTTCCACAACTTTGGAAATATAAAAAAGTCATATTTC
CATACTTACAAAAGTATATGAAAATATCATATTTTCAAGATATTTCCAGG
ATTGGAATTCTCTTATTTCGCCCAGTGATATAGATGGGAACCCGTCGAAA
TTTTTATTGATTTTCCACTCATGTGAGCTTAGTGAAATGGGAAAATTAAA
GTCTATTTCAAATTAGCTGGCAGTGGTTTTAGCTTTTCACTCTTTGCTGG
GTTAATTTTTTTTCCATTTACAGATTAAAACACTCTCTAGTTTAACACTT
ATAACAGGGGTTTTTCTAAGCACTTTTTTATGTCCGTATACCAGCCAAAA
TACTCAATCTAAGATTGGGTTTTGGAAAATCAATCCAAAATATAAAATAT
ATTTTCTAGCAAAATTAAACTTGTTTGTTGTTTACAAACAAAAATCTCTA
ATATTACATATTCAAAATATTTTTGGGAGCTTCGCCCTTTGAACACCATA
ACCAAACCCCCAGCTTCATCAATATACAGCTTTACTGAGAAAATTCCCTT
ACAAAGAATGGCCCCAGCTCAAAGTGCTTAGAAAAAATCCCTGTTATTAT
GATTACCAATATCTTTTGATGATCTATATACCATATCTTGATATCGAAAA
CCTCTAAAAGCAGAGTCTCCTTTACAAGATCAGGAGATTTTTTCTGCTGC
GTTCTGCTGCAAACATCTTTAAGAACTTATTGATAGACAGAGTAGGCTTG
TTTATTATTGGTGAAATTGTTTTGTTTTTTTTCCATTTCTTACTTAGTTA
GACTTGGTCATTTCGAAAGGGAACCCAATGAAAAAGAATGCAAATAAATT
GTGCTTTCGCCATGGACTTTGACAACTGTTTATAAGAATCGTGAACCTTA
TATGTTTCTTATATCTAACACACTGGACTTTGGAACGCCCCTTTTTATTG
GATAAAGATATTTTTCTGACAATTTGAATTCTCGACAAGAAATACTTTTG
AGGTAATGTTCCTTGGTGCCACGTTGTTCTAGAGTTGATGTGTAATTTAC
CTGGGAAACGTGATTCGTGTTGTTTTTTCTTTCTCTTTTGGAACTTTTTC
CGCCGTTTTGTTTTTAAATTTGAGCGTAAAATCTCCCTGCGAATGAATCG
ACTGGCGATACAGTTGCAAAAACACTAAATTATGCCACTTCCGTTATGAA
AGTCCTTGTTTTTTGTTTATTTGGTGAGATTCTGGGATGACCGAAAACTC
CAAATCTTTAAATTTTTACTCTGATTTAGATCACAATCCAAAAAAACTTA
AAAATACCGGAAAATACATAAATTACCTTCGTGTTAATTAAGTAGTGATC
ATGTTTTTGCAACAGCACGATCGATGTATAGGCCTTTTCATAAATTATTT
TGAGTGCAACAAGTGCCTCGTTTTAAAGCCATCACCAAGGTGATTAAATC
GGTCGAGTCTCCGGTGTTACTTTTAAAAGTAGAAATTTTTATCATGAACT
CCCCCCTAGTAATCAATTACAATAGCAATATTTTGAAAACGAAGAAAGCG
CGTTGGTCCCGATGTGATTTTATGAAAAGATCTATTGGTATCGAAGTTGT
GCATTTATATATACGGGGTTTGCAAAAGAAACATGGCCAGACAAAAATTG
TGTTACTTGTAGAGCAGTTATTGCCTGAAAATTATATTTCTCTTTTTTTC
ATAACCTTGTTTGTTAGTTGGTACGGAACACATCACCATTCCTTCATCTT
ATTCTTTGTTCTACTCTTTCCCATCCATAGGAAGACCACATTATGAACGA
AGAACAAATCGGTGAATATCGAGAAGCTTTTGAACTTTTTGATAAGAATA
ACGATGGAAATATCAGCATCAAAGAATTAGAAAAAGTTATGAATAGTCTG
GGACAGAACCCATCAGAAGCTGAGGTATGATTTTCCCAGATTTCCCAGCC
TTCCTCGTATCCTCGAACGAAAAGAGGTATATGAATTAAACATAGGCGAA
GCGAGAAACCTTGGAAAATTTCAGAGGGAGTGCAGACTTTTATGATATAT
TCATTATATTTTGATAAAACAAAGACAATAATTACAGTGTCGTTAAAACC
GCTCTCATCCATAAATTTTACAGGATCTCGCTACGCCTATGATTGTAAAC
TAAACTATGCATTAGTTTGATCTTTAATAAATCAAAGAATTCTAGACAGG
TCAAAATAGCACCGAAAAGAACAATATAAAGCAGAATTAATGTACTGAAA
AACTAAAGAGTCACTTTAAAAGTGTGATAAATGATTATTGCCACACTTAC
GAGGAATTACATGTGCATGCATTTCTTCTTGGGCTTGTGCTATCTTGAGC
CTCTCTTCTATGCCTCTTGAGATCGAATCAAACCTCTTAGTCTCTCAGAT
CGCTTTTTTATGGTTCTGATAGTGCTCACCAAAATTGTACCATCGTCCTT
CAGTAAAATCAAAAAGTGGTGAAAGTAAGATCAAACAAGAAAATTTCGAG
TGTATTTTTGATAGCTATTCCTTTTTTTACCAGCTCCAAGATATGATCAA
CGAAGTAGATTCGGACGGTAATGGAACGATTGATTTCCCAGAATTTTTAA
GCATGATGGCGCGCAAGATACGGGATACTGACACCGAAGAAGAAATCAAA
GAGGTAACTCTCATTGACTTTTACATAAAAAAGGAAATCATTTTTGCTGA
AGAAATTTTTCTTCAAAATAAATGAACCAGTTTTCATTTACAAATCCCTA
TTTGCCTTCAAAGAGACGAACAGGTTTACTTTCAAAAATACATGAGCAGA
TTTACTTTCACAAATGCGTGAGAGGATTTTCCTTCACAAATACATCGACA
AATTTTCCTTCAGAGACACAAAACTACTTATCCTGCGAAGACAATGAAAG
ACTTCTTGAATCCTTAAAAAAGTTAATTTAATGCAGTTGATCAAAGCAAG
CACAAAAGTCAGAGGTTTTCCTTGCAAATGAAAAATTTACTTTGGCGAAT
TCTAGATTCTATAAAAGTGAATTCTTAGCAAGTCTAGTGTATTGATTAGG
GCGAATATGTATTTGATGCGGCGAACCGAACTTTTAGACCTGTGAAAAGT
AATTTTTTTCGTGTCTAGGACCAGCAAACTTCGCTGTTCACCAGACTTAA
AAGACGCCTGCATATTCTTTCATTTTTCCAGGCGTTTCGAGTGTTCGACA
GGGATGGTAATGGTTACATCAGTGCATTGGAATTACGACATGTGATGACA
AACCTTGGTGAAAAGTTAACTGAAGATGAAGTGGATGAGATGATTGCAGA
AGCGGATCAAGATGGAGATGGACAAGTTAATTATGAAGGTCTGTTCCTCC
TTTTGTTTCTTTCTTTTATTTCCTAGACTAGAGGATATTTCTAATTATTT
TAATAGAAAGAGACATCTGAGCTAACTGATGCTTAGGTCCCTCTAAGTAT
CAAAAGTTTAATAAATCACCCATTACCATCTAAAGTCTATTCACGATAAG
TGTGCACTCTTTTTTCTTTTACCTATAACTTTTGAAGGAATTCTTCAATC
TTTATAAATTTGGTATCGTTGGAGAGATATTTGTGAGTGGAACAATTTGA
AATAAAAAGATCTTCAAAAGAATTCTAAAAATGAAGATGAAAATGAAGAA
GAAAAAAATGAAGATCTTGTAGAAAAGTGCTATAACTTTCATTTTCACTG
GAGAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCAATACAAAGTTATGATACAAAGTTGATAAGTGATTGACCCCA
AAAAACAGCAGAAAACAGCAGAAAACAGCGTTTTTAGACGTCAATTAGCT
TATAACTTTCTTTGATATCTTTTGACTGAATGATTATTTCTGAGAAATTT
TTTCACAGTGATGACGTTCGATGATTAAGGATTTACTTCAGTAAAAATGA
TAGTTGTAGCACTTTTCTATAAGATCTTCATTTTTTTCTTTTTCATTTTC
ATCTTCATTTTTAGAATTTGNNATCTTTCCAATGATACCAAATTTATAAA
GATTGAAGAATTCCTTCAAAAGTTATAGGTAAATGAAAAAAGAGTGCACA
CTTATCGTGAATAGACTTTAAAAACTTGATTTCATCGTGAACATTGTTGA
AATCAAAGGTTTAACTTTGAAAATTGTGAACGATTATCCTGATGATAGTG
GATCACATTATTTCTCACCAGATTGCTTGTAAAAATTTTCAAATTTGATA
AAGTACTTGTTTCATATTGCAGTAGTTTTGAGATGACTAAAATTTGGGAT
ATTTTGGCTCATTGACTTAAAAAACATCTAAAGTTTGTTCCAAAAGATTG
ACATTGCACTGCATTTGAAATAAAGAATTCAAAAATTTCGAAAATGAAGA
TGAAGAAAATGATGATGAAGAAAATGAAGATTCTTTCTACTTGCTCACAA
ATTTTGAATTCATACTTTTCTGAAACTTTGAACTTGATTGCTGATTTCAA
ATATGTTTTCAGATACTTTATAGGTATCTTTATTAGATAAAAAATTACAG
CCCTCCGAAGTGGTTCCATTTTTAGCCATTTTAAGCCTATTTCGAAGGGC
TTTTAATACCTTAAGGGAACTCATTTTGGCGGAATTAGTTCCCGCCAAAT
TATTATTATTCTACATCCAAATACGCTTCCAAAAATGTATAGTTTGTTAT
GGTTTAGGGGCTGGAACTGGGGCGGAAAAATTAATGCAATTCTGGGACAT
GCATTAAGTTACCCGAGCCAGGGTTCAGGTACCCCCCACCATTTTGTTAC
CCCCAAAATTTTCAGAATTCTAAAGTAGCCCCCTACTTTGAGTTTTTTAT
TAAAAATGCAATAAAGAATTTTCTGCTCTTTTGTCACTCCTAGGAAAATA
CTTCAATGGTGAGCATCCCTTCGTTTTTTAACAAATTCAAGGGTTTCTAG
AGTTTTTAGTTGATCTTTGCTAGTTTTAAAGGATTTCAAGAAGAAGTCTG
TCGACAATAAGAGAAAGGTTGAATTTTCAAATCTCAAGGTTGAATCCTCA
ACTCCCTTAAAATGCATAAAAAACCCCTAAGACGTTTTCTTTAACAAAAT
CAATTTAGGAATACTTCCAGGTCTGGCTTTTTAAACACTTTTTTTTTGAG
GTACCCGCATTTACAAGTACTCTTAGGTGCCAAATAAACGGGGGGGTTGG
AATAAACGGGGGGGTTGGAAAATTTTTGAAATTTCAATAAACGGGGGGGA
CCTAATTGCCGGGGGGGGGTGGAAATTGTACTTATGAAAACCCCAAAATA
AGGGAAATATAGGCTAAAATCAGGCTTTTTGGACCAAAATAAGGGGACTT
CTTTTAGCCAACTGAAAATATTCTTTAAAATTAATAAACGGGGGGGGCCT
AATAAGGTCCGGGGGGTTGGAAAATTTTTGAAATTTCAATAAACGGGGGG
GACCTAATTGCCGGGGGGGGGTGGAAATTGTACTTATGAAAACCCCAAAA
TAAGGGAAATATAGGCTAAAATCAGGCTTTTTGGACCAAAATAAGGGGAC
TTCTTTTAGCCAACTGAAAATATTCTTTAAAATTAATAAACGGGGGGGGC
CTAATAAGGTCCGGGGGGTTGGAAAATTTTTGAAATTTCAATAAACGGGG
GGGACCTAATTGCCGGGGGGGGGTGGAAATTGTACTTATGAAAACCCCAA
AATAAGGGAAATATAGGCTAAAATCAGGCTTTTTGGACCAAAATAAGGGG
ACTTCTTTTAGCCAACTGAAAATATTCTTTAAAATTAATAAACGGGGGGG
TCCTAATAAGGTCCGGGGGGGTTGGAAAATTTTTTCGAAAAATTAACAAG
CGGGGGGACCGTTTATTTGGCACCTAAGAGTACTTCTCTTGGGATTGGCT
TAAAATTTAAACGATTTTTAAAGATTCAAAAAGTAAACAAACAGACTAAT
TTCTTAACGTAAGTTTAAGTAAGAAACAATGGAAAGAAACAAAAGGCTTC
CAAGGCCAGGGTTTCTTATAGGGGCTATGGTATATCTTATTACACAAAAT
CAACTAGACATGGTTTGCACTAAAATGCTACCGTTATAATAGCATTTTAT
AAGTTAACATGCTTAATATTGTACATAATTCCTTGTTTGTTCTGTCTGTA
AAAACTGCACTTTTTTCCCATAAGAAAAATTTTATAAGAACAACGAGGCT
CAAAATCGCCAAAAATAGGAACAATTTAAGCATAATGCTGAGCCTGAAAT
TTAGAGGTTAAAGTAGTAAAAATTGGGTAGAACGCCTTAAATACCTCGAT
TACACCTTGTAAAAAAGTACAGGATAAAGCGATAAAGTGATAACCCAAAG
TTATATGACCGTCTATCAAGAGTTATAAATTTGATTCTTATAAAGTAGAT
GCCTGTAAGAAATATACAAATATGCTCATATTACGCGTCCTCCCTTCTTC
ACTTTGTAAAAACAAAACCACTTTCATTTTCATGAAGAGAAATTCTGTCT
ATTTTAAAGGAATCCCTTTATAAAGTTGAAAGACTCACTTTGCTCAATCC
TTGAAGTACAGATTCCGGTTTTGGCTCATCTCCAGCCATTTTCCAGACAG
AGCACGTTTGATCATCGTTGTTGCGTAATACGGTCAATCGCTGAAAGAAT
TTTAGGTATTTTAGTTTTTTATTTCGATTTGGTTATATCGCTAGCAGATG
ATTTTTTATGAAAGATAGAAAAACAAATTTCTTAACAAAAAATGGAGCAG
TATATAGGAGAAGAGGTATCCGCCAATTAAAATAATTTCTGTCCCAAAGA
AAATGGGAAGATTGTTTATTTTAATGTGTTATTCTTGAAGAAAAGAGTAA
TGTGTCGTTGGAAGATGATTTTAAGTGAATTCAAGGCTAAATTGAAAAAT
TTTCGAAGAAAAGAATCATTGAATGATATGATTTTTAGAAAAATTCTTCA
TTATCTACACATTTCTTCTTTATTTCTAGCTTTCTTAAAAATCAAAATTA
TTCTCCTTGAGAATATCAACGGTATACACGTTGTTTTTTTTATAAGGAAC
ACGTTTATAAGGAACTCGAGGCTGAAAATGGTTCAAAAAATAAGGAATTG
TTAAGGAACTGCTCAGGCTGAGAATAAGTGGATTTGAAAATAATGTACCT
TATTGGGACTAACTTGACCAAATTTTGATCTTTCAAGGGGCAAAAAGTTC
AAAATTTCCTATGTAGTAAGGAACTCGATAAGGAACTTTGAGACTGAAAT
TCTCTGTAAAAATAAGGAACTCCAGGCTCAGAGCAAAGTTAAGGTTCCTT
ATAAAAAAAAAACGTGTATAACTTTTCAATAAAGAATAAATGGTTACTGA
TAAATTGTTAAAAGCTTTGTGTCCTCGTGCTTTTGAGATTAGGATTCGTT
AGGATCGAAAATTAAGTAAATGTACCCAGCATCTTTAAAAAGAACTTACA
TTTTTGAAGTCCTCCATGTAAGTGACATGAGGCCGGCCTTCATGGTGAGG
AACGTCGTAGATCACAATGTTGTTCTTTTTATCCACAGAGATCTTTTCTT
GGTAATTGTGACCATTCTCGGTAAACGCCAAATTGTGTGTTTGACACTGT
TAAAAGATATCAAAAAATAGACCTTTGTATAAATTACGTCACGAGCAACG
CTGACCTCGTTTTCAAGATATTGCTATGGTAATTGATTCCCAAATAACTT
CATAAGAAGATAACTCTATTTCTAAAAGTAACACTTGAATATTCAAGGGA
TTTAATCGCCTTGTTAATGGCTTCAAAACGAGGTAGTGTACAGTTGCGAT
CAATAATAATTTATGAAAAGGCCTATTGACATATCAATCCGATGTTTGCG
AACACGGTGACTTGGAGTGAGCTAAAAATTATGAGACCACTACGTTTAGC
TATTTTAAAGATTCTTTTCTGTCTTTAGCTTTAATTTCAGAAAACATTCT
TGTTTAGCTAATCAATAGTAAACGCGATATGCCAATCCGGGTTGTATTTT
TCTATCTAAGCAGCTTTAAGTCGCACACAGAATAAAGGAAAACATACCTT
GATAGCGACCAGACTTGCTAGCGCCAACACGACAAAGTTCAACAAAATCT
AAGAAGAAAACAAGATACGATATACTCGCAAAGGACTAAAAATATTCCCG
AAAAGGGCTGGTTAGCATACAATACCCATAAAGAGGCCCATCTTATTCTG
GTTAAAATATAGAGATAGTTGTTGAGTAGTTTAAGTCACGCCAACTTAAT
AATTCCAAAGTTTAGAAAAAACAATGTATTTTATATTCGACTTTATCTCT
AGAGTGCTTTACTTACATTCATCTTGAGTTTTCTTCAATGTTTCTTCTTT
TTGAAATTTCTTCCAAAACTTGTTGATGGTGGTAAGAGAAGAAACTGGGT
GTTTTATAGGGATCTGTAAGCACCGGATTGGCAACTAATCTAGAAAAATA
TATTCCCATTCGTCAACTATACTGGAAAATGACTAGTCATTTTTCAAAAA
AACACTTCAAAGTATTGTTTAAACATCTGAACAAATTATTTTTTTCTCTG
AAATGGATAGTGGGTTGAATATTTTTCTGGAAACTTACTCGAGTGAGTTA
CAATCCCGTTGGGAGGGGGTACTCCAGTTGGCAGATGACGGGTACGTGCA
GACGGAACCTTCCAAAACCTACCCTTAGAGAGACTAATTTTTTGCGAAAA
ACTGACCCTTAGAGTAACATTTTTAAAACAATTTCTTCGATTTTCAAATA
GTTTTCTACTCTTAAAGAGATTATTTTGCAATTTCTTCTCTTGAAACTAA
AATATTTCTCTAAATATATAAAATCACAAAAATTACAAGTACTGTGATCT
TGAAGTTTTTACCAGTGATAGTTTGTTCACGAAGGCTGATACGTCTAAAA
AAGAGTCAGTCTACTGTCTCATAAGTATGTTATTTTATCATAACTTTTGG
TCTGACCAGACTTTGAGCTTGCATCGTCATTAAGGAAAGGTTGCTTTACT
ATCTTGTATATTTTTTTCCAATCTAATTTGGGTTTCATCAAAAGTTACAG
CCATCCAATCTTCGCTGCAGATTATGCTGAGACAGATCCAAGGCGATGCT
ATCGTCCGTTAGAGGGTCAGCAAACGAAATTTTTCAATTCTGGAATACAG
TAAAATAGGGGTGGTTTGGGCGCGAAAAGGGCAATTTGGGTCTGTAAAAT
TCACGATATTCTTCAAAAGCTTATCATGAAATTGCGTCACAAAAAAGCTC
GTGGAGATTTTTACACCCCCTTCTCACAGACCCGGTAGGATTTTTTTCAG
CCAGTGGGGTTAAAAATAACGGACCAAAACTTTTAAGGCTGGGGTTTTGA
GTTCCATTGTTTTCAAGCCATAAAATTCAGTAGTTGGAGTGAGGATTCAC
TTACCTTATCACGGAAAAAAGAGTTTTATTTAGTCGGGGTTTTTTTCCTT
CGGGGAAAGATTTCGTCACTTTCCCCCGATCAAAATTTCAAATTCGTCAC
TTTTCCCTGACGAAATTTACAATTTAGTTACTTCAAGTTACTTTAGTTAC
CCAACTAAATTCCTTCACTAGCTCGAAAAAAGGTCTTTTAATTCGACGTT
TAAAGCACTAATTTCGGTTAATAAACGTGTAAAAAATTTAGATTTTAATT
TAGCTTGGGGTTTAAAAAATCGGATAAACGTTTTGGTCAGGGATAAAAAA
ATCGGGTAAAAGTTTTGGTCGGGTGATTAAATATCGGGGAAAAATTCGTC
GGGGGAAAATTTCGTCACGTCCTCAAAATTTTCATCACTTTCCCCCGACA
TTGTTTTCCCCGATAAGGTATCTGATTGTTTTCAGCTGGGACAAAAATTG
GAGTATACTTTTCCACTGAAGACGATAATTTGGCCAATTTTTCCAGTCAA
AAGGGTTCCCATTGGGTCTGTGAGAAGAAGTGTATCTTTTTCGGCGCTGC
ATTTTCAGTTATCGCTTACTTAAGGTCAATATGCTTGGGGATTCAAGTAA
TTGCTTTAAAGTTTTTACCTCGGGAAACAAAAGGTGTAACCAGGATTAAT
TTTTACGATTTGGCCAATTTTTCACCCTGATATTCTTATAGAAGATATTC
TTATACAAAAAAACGTGTATATCGATATGCTCAATTGAAAATGAACCCAA
TTTCGTACCCAGAGCTACTTGTACCACTTTTTGATTTTACTGATGAACGT
GATTTAACACCCCTGTCTCACACCCCCGGTGGAACTTTTTCACTCAATGG
GGGATAAAAACTCCTGTTGAAATCTCAATGGGGATAGAAATTCTATTGTT
TCAAGGTTAAAAATCCAGTGAGGATGGGTTTGGAGTGTAATTTTCAAACA
TTGAATTTCGAATGGGGATGAAATCAAAGTCAATTTCCAAGTGGGGCTGA
TATTTTAGGGTATTTTCCCACCAAAGAGACGAAATTTTTGTCAAATTTTT
CAGTGGGGCTGAGGTCCCAACGGATTTGTGACAGGAACGTGATAGAATTC
ATTAGCGCTATCAGAATCATAAAAAGCGAACTATAAGAATGGGTTCGAGT
TTGGAATGAAGTTAGTTAAATAAAAAAGAATAAGTGCAAGAAGCTGAGAA
AACATATTTGTTTTACGTAGGTTAGAGGACCTCTTGAAATCTCTTTAAGA
TTTTCAGCAAATAAAGATCTTAATGGCCGTATTTTTATGCAACGTATCAG
ATTTTACCAAAGTCAAAATGGCCGAAATTGCGTCGAGCACTATGATGCAA
ATTGTATATTTTATGATTTTTTTCTTTCAAAAAAAGTGTTCTAAATATTG
GATAGAGAAACATTTTTGTGAGATTAAATCAACCTTTTGGTCGTTTGCTT
GACAGATTTTCACTATTCAAATCTCTCGAAAAATCTTTGGCGGGCGCATG
CCCATTTCTCGAGACAGTCAATGTCAACGACATCAAAATGTGGCTATAAT
GTAATAATGTATTTACCACTTTTTATCTACAGAGTTCACCAGACTGATGT
TATCAACCCCAAGATGACGAAAATGCTCATGAGGTCAACACATGGAAATA
CATCAACAGACAAGCTAGGAAGATAGAAAAGAGACTGGGCGATAATCTAT
ATTTCTAGTGTTGTTTAATGTAAAATTCAAGAATATTGTACACATTATTA
TAGTGTATTTTTTCTCTTTTTTAGTAAAAGTTTCGGCGGGAAAAATTGTA
AATGTATTTATAAGAAGATATTAAAAGAAAAATATTTAAAATATTTACAA
ACTTACAAATAGTATAAAACTCCCTCACATTATTAAAAGATTTTCATCAT
TTGATCAAAATTTCACACCCCTGTCTCGCAGCCCCGGTGGAGCTTCTTCT
CACGGCGAAATTCCAATAAAGATAGAAATTCTATTTTTCCCTGACACAGG
GGTGTAATTTTGTTACCTTTTTTCGATGTAATCAGTTCAATCGAAATGGC
CTCAGTGTCGACCCCTGGGATAGGAAACTTAGGCAAATTAGGAAAGAGGT
AGTGCGAGAGATAAGGTACCTTTTTGCACCAAGTACAAAAAACTTCCCTT
TCTAATATAAGTGTTCCAAAATGACGAAAATCGATTACATTACTTCGAAT
AAACGGTAACTTTTTTAGATTGTCCCGTCGAATAAACGCCCCTCATTAAA
GGAAAAGTTTTTTATATGATGGCTCCCAAAATAAACGCCTCCTCTCTAGA
AGGGACGTTTATCGGCTGAAATTGTGTCCACGAAGTATAAACTTTGACGT
AGAACGCTTTTCATGCTATCTTCAATCATTAGAACTGCAACTAACTAGCT
GTTTTGTTCGACATTGCAGTTTTTGAGAGTTCCCTGGAGTTAGATTAAAT
TTTGGTCATGCAAAGTTTGAAATTTATCGCTTGAATAGCGCTCTAAATCG
AGATTTGAACTATATAGACACATTTTTGAACAACTCGGTGTTTAAAACAT
CAAGATTTAAGAGAACTCTCATATTCATGATATTCATGACGTAATGTTTT
CTACGGAAATACCTCGGTTTTAGCCAGTAGTGGCAAATTTAAATTAGACA
AAATTTGTATAAAATTTGCCACTACAAACCGGGAAAACATTACGTCATGA
ATATCATGAATAAAAGAAAACTTCAGTATTTATTGATTATTGTATCAAAG
CAATCAAAGTGATTTTCATCTACTTCTACGTCTCTAAAAGGATATATTTG
TACATTCCCACTCGCCCTATCAAAGTGACTTTGGACGCCCTGGGCGTTTA
TTCGAGCTACTACGAAAAAAAAAACAGCAAAACTTTCTCTAAGAGTCATT
TTATTTTTTGAGATTCAATGTCAATTTGATCAAATTCGCCATACTAATAC
AACCGGCCAACAAAACCAAGTAAAAATTCAATGCAAATCTTTCAGATACT
TCAAAGTGTTGGTGTTGCTCAAAAGAAATGTTCGAATCTGATCCACCATC
AGCCGTTTGAGGGTTGTTATAGTCTGAATTTTTAAAACTATATAGTATAA
CAACTCCCAATGAGAAAAATGTCACAAATCCTTGTATTAGAAATTGCCAG
AGTCTTTGTCGACTGTTGGTGTAAATGGAATAAAGCAAATTGAATACTGA
CATCAAGTTTATGACGAGTCCACAAAACATAAAAACCCAACAAAGCATAA
GCCATTCAGGTATCACGATTTCTTTTTCCGACATTACACCACCAAAAAGT
TCAGCCGTTTTAAAACAGCCTAAAATTTTATTAGTTTGAAGTTCTATATC
GCAATATTTCCATATTCCAACATAAAGCCTTTGTTTAACACCATTATTCA
AAGTCTGCATGTTTTGAATAGACTTTGTGGTGTACATTGGTGTTGTTGTT
ACATGCGACCAATGAATATCCACTGACGAATGCATAAGTAAGCAAAAAGT
ACATGAAGTCCATACAAAAGCACAAACTGTGTTCTTTCTACAAGTTGACA
TTTGTTTAAAAGACATTTTCCACTTAAACCTTCTATAGATCGATTGAATA
CGGCGTAAAAAGTGACAATTTTCTCTAGTACTATTCCTCCAAAATTGAAT
TTGAGGTTTTTCATTCGATTTTTGTAACATCGTTTGCGGCCAACTTCCAC
ATCTTTATTGCCTCTCTCTATATAAAATATATATGGAAAATTAAACTTCA
ACCATATACTTATAGATATGTTGTTTTACAAAAAAGTAAAGTATAGATAT
CAATTATTATAGTATATGGAATGTTGGAGAGAATGATCGATAGAATTTTT
TATTACTCCAAACTGTCACAAATCTCCAGAAAGTGAAACTGAAAGTAGAC
AGCTCTCTCTGACTGGATAAGCGTCGAGGGGTTTTGTTCAATTTAGATAT
CGATGTAAAAGATTTCTTATATTGAATATTTCTCTTGATGCGATGTGACG
ACGAAGGAGAAAATTCTAGCATAAAATGATAAGCTCCGGTTATCAATATT
TTAAATCATATTGTTTGATAATTTGATGTCCTAGCGCCTGTTATATAACA
AAGGATACATTTTCGTTGATGATGAAGATTTCGGAAGCCGTGGCTTCATT
TTGTGTCAAGTCATGCGCTACTAGGACGAACAAGTGTGTTGATATATGTA
GACTATAACACAGACTAAAACTTTGGAACTTTGCATTTGCTCAAATTGCA
TCACCAACCAATCTTTGACGATTTTTAACAGGCCCGGTGGGAACGGGGAG
ACTGGGGAGACTTCAACCAAGGCTATTGAGATTTTTTTCTCAAATTCCTA
GCGAATTTTATCTCATTTTGAGCTTTCAGCCTCCCCCTCTTTAACGGTTG
TTCCGCCGGGTTTGTTTAAAGCCTTCACATCTTCGAATTCACACAAATTA
TAGCAAGTAAGAGAAAAATACTGCAATGTGCTTTATTAGAACAATTTCAT
AACAACAACCAGGCTCAATAACACCAGATAATAAGAATAATCTAAGAACA
AATTTGAGTATGGGATAGTCA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_035681	XLOC_035681	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_279	supercontig	scaffold_279:34744..49664 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0.139915	0	0	0	0	0	0	0	0	2.37281	3.29664	0	0	6.12677	6.94095	1.53302	2.28851	2.74111	3.88146	14.7138	10.2638	0.0668179	0

Blast

[Close]

BLAST of TCONS_00056653 vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 4.823e-71
Identity = 112/144 (77.78%), Postives = 130/144 (90.28%), Query Frame = 1

Query:  214 MNEEQIGEYREAFELFDKNNDGNISIKELEKVMNSLGQNPSEAELQDMINEVDSDGNGTIDFPEFLSMMARKIRDTDTEEEIKEAFRVFDRDGNGYISALELRHVMTNLGEKLTEDEVDEMIAEADQDGDGQVNYEEFTRLMLS 645
            + EEQI E++EAF LFDK+ DG I+ KEL  VM SLGQNP+EAELQDMINEVD+DGNGTIDFPEFL+MMARK++DTD+EEEI+EAFRVFD+DGNGYISA ELRHVMTNLGEKLT++EVDEMI EAD DGDGQVNYEEF ++M +
Sbjct:    5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148

The following BLAST results are available for this feature:

BLAST of TCONS_00056653 vs. Swiss-Prot (Human)

BLAST of TCONS_00056653 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CALM3	4.823e-71	77.78	Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1	[more]

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TCONS_00056653 (transcript) - C. hemisphaerica