TCONS_00056654 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00056654
Unique Name	TCONS_00056654
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3566

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_279:34744..50715-

transcript sequence

>TCONS_00056654 ID=TCONS_00056654|Name=TCONS_00056654|organism=Clytia hemisphaerica|type=transcript|length=3566bp
CTACCACTCACTCGGTCGTTTCAAAGCGTTCTTGCAATACCACCACAGCG
ATCCTTCAAATATAGGAAGTCAATTTGAAAAACAAGATCTACACCATTTA
CATTATTCCATCGAGAAGTTGAAGACTATTAATATTATCATCGCACAACA
GGCATGGAAGACCACATTATGAACGAAGAACAAATCGGTGAATATCGAGA
agcttttgaactttttgataagAATAACGATGGAAATATCAGCATCAAAG
AATTAGAAAAAGTTATGAATAGTCTGGGACAGAACCCATCAGAAGCTGAG
CTCCAAGATATGATCAACGAAGTAGATTCGGACGGTAATGGAACGATTGA
TTTCCCAGAATTTTTAAGCATGATGGCGCGCAAGATACGGGATACTGACA
CCGAAGAAGAAATCAAAGAGgcGTTTCGAGTGTTCGACAGGGATGGTAAT
GGTTACATCAGTGCATTGGAATTACGACATGTGATGACAAACCTTGGTGA
AAAGTTAACTGAAGATGAAGTGGATGAGATGATTGCAGAAGCGGATCAAG
ATGGAGATGGACAAGTTAATTATGAAGAGTTCACCAGACTGATGTTATCA
ACCCCAAGATGACGAAAATGCTCATGAGGTCAACACATGGAAATACATCA
ACAGACAAGCTAGGAAGATAGAAAAGAGACTGGGCGATAATCTATATTTC
TAGTGTTGTTTAATGTAAAATTCAAGAATATTGTACACATTATTATAGtg
tattttttctcttttttagtaaAAGTTTCGGCGGGAAAAATTGTAAATGT
ATTTATAAGAagatattaaaagaaaaatatttaaaatatttacaaactta
caaatagtataaaacTCCCTCACATTATTAAAAGATTTTCAtcatttgat
caaaatttcacacccctgtctcgcagccccggtggagcttctTCTCACGG
CGAAATTCCAATaaagatagaaattctatttttccctgacacaggggtgt
aattttGTTACCTTTTTTCGATGTAATCAGTTCAATCGAAATGGCCTCAG
TGTCGACCCCTGGGATAGGAAACTTAGGCAAATTAGGAAAGAGGTAGTGC
GAGAGATAAGGTACCTTTTTGCACCAAGTACAAAAAACTTCCCTTTCTAA
TATAAGTGTTCCAAAATGACGAAAATCGATTacattacttcgaataaacg
gtAACTTTTTTAGATTGTCCcgtcgaataaacgcccctcattaaaggaaa
agttttttatatGATGGCTCCCAAAATAAACGCCTCCTCTCTAGAAGGGA
CGTTTATCGGCTGAAATTGTGTCCACGAAGTATAAACTTTGACGTAGAAC
GCTTTTCATGCTATCTTCAATCATTAGAACTGCAACTAACTAGCTGTTTT
GTTCGACATTGCAGTTTTTGAGAGTTCCCTGGAGTTAGATTAAATTTTGG
TCATGCAAAGTTTGAAATTTATCGCTTGAATAGCGCTCTAAATCGAGATT
TGAACTATATAGACACATTTTTGAACAACTCGGTGTTTAAAACATCAAGA
TTTAAGAGAACTctcatattcatgatattcatgacgtaatgttttctacg
gaaatacctcggttttagccagtagtggcaaatttaaattagacaaaatt
tgtataaaatttgccactacaaACCgggaaaacattacgtcatgaatatc
atgaataaaagaaaacttcAGTATTTATTGATTATTGTATCAAAGCAATC
AAAGTGATTTTCATCTACTTCTACGTCTCTAAAAGGATATATTTGTACAT
TCCCACTCGCCCTATCAAAGTGACTTTGGACGCCCTGGGCGTTTATTCGA
GCTactacgaaaaaaaaaacagcaaaactttctctaagagtcattttatt
ttttgagattCAATGTCAATTTGATCAAATTCGCCATACTAATACAACCG
GCCAACAAAACCAAGTAAAAATTCAATGCAAATCTTTCAGATACTTCAAA
GTGTTGGTGTTGCTCAAAAGAAATGTTCGAATCTGATCCACCATCAGCCG
TTTGAGGGTTGTTATAGTCTGAATTTTTAAAACTATATAGTATAACAACT
CCCAATGAGAAAAATGTCACAAATCCTTGTATTAGAAATTGCCAGAGTCT
TTGTCGACTGTTGGTGTAAATGGAATAAAGCAAATTGAATACTGACATCA
AGTTTATGACGAGTCCACAAAACATAAAAACCCAACAAAGCATAAGCCAT
TCAGGTATCACGATTTCTTTTTCCGACATTACACCACCAAAAAGTTCAGC
CGTTTTAAAACAGCCTAAAATTTTATTAGTTTGAAGTTCTATATCGCAAT
ATTTCCATATTCCAACATAAAGCCTTTGTTTAACACCATTATTCAAAGTC
TGCATGTTTTGAATAGACTTTGTGGTGTACATTGGTGTTGTTGTTACATG
CGACCAATGAATATCCACTGACGAATGCATAAGTAAGCAAAAAGTACATG
AAGTCCATACAAAAGCACAAACTGTGTTCTTTCTACAAGTTGACATTTGT
TTAAAAGACATTTTCCACTTAAACCTTCTATAGATCGATTGAATACGGCG
TAAAAAGTGACAATTTTCTCTAGTACTATTCCTCCAAAATTGAATTTGAG
GTTTTTCATTCGATTTTTGTAACATCGTTTGCGGCCAACTTCCACATCTT
TATTGCCTCTCTCTATATAAAATATATATGGAAAATTAAACTTCAACCAT
ATACTTATAGATATGTtgttttacaaaaaagtaaagtatagatATCAATT
ATTATAGTATATGGAATGTTGGAGAGAATGATCGATAGAATTTTTTATTA
CTCCAAACTGTCACAAATCTCCAGAAAGTGAAACTGAAAGTAGACAGCTC
TCTCTGACTGGATAAGCGTCGAGGGGTTTTGTTCAATTTAGATATcgatg
taaaagatttcttatattgaatatttctctTGATGCGATGTGACGACGAA
GGAGAAAATTCTAGCATAAAATGATAAGCTCCGgttatcaatattttaaa
tcATATTGTTTGATAATTTGATGTCCTAGCGCCTGTTATATAACAAAGGA
TACATTTTCGTTGATGATGAAGATTTCGGAAGCCGTGGCTTCATTTTGTG
TCAAGTCATGCGCTACTAGGACGAACAAGTGTGTTGATATATGTAGACTA
TAACACAGACTAAAACTTTGGAACTTTGCATTTGCTCAAATTGCATCACC
AACCAATCTTTGACGATTTTTAACAGGCCCGGTGGGaacggggagactgg
ggagacttcaacCAAGGctattgagatttttttctcaaattcctagcgaa
ttttatctcattttgagctttCAGCCTCCCCCTCtttaacggttgttccg
ccgggttTGTTTAAAGCCTTCACATCTTCGAATTCACACAAATTATAGCA
AGTAAGAGAAAAATACTGCAATGTGCTTTATTAGAACAATTTCATAACAA
CAACCAGGCTCAATAACACCAGATAATAAGAATAATCTAAGAACAAATTT
GAGTATGGGATAGTCA

Run BLAST on NCBI

transcript from alignment at scaffold_279:34744..50715-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00056654 ID=TCONS_00056654|Name=TCONS_00056654|organism=Clytia hemisphaerica|type=transcript|length=15972bp|location=Sequence derived from alignment at scaffold_279:34744..50715- (Clytia hemisphaerica)
CTACCACTCACTCGGTCGTTTCAAAGCGTTCTTGCAGTAAGTTGGATTTT
TTTATATATAATTTGTATCTTTCTGAAATACTTATTATTAGATGATCCGA
AGTCAAAATTGTATCATTTTGCTCTTGACTATTATTTATTGAGGGTAATG
TAACGACTTCAAAGTGAGAAGTATTACACAATTTTTTGATGAGGCTCGGC
TGTACTCTTTTCTTCTGGCACTTTTGTGTCTTTGTCTGCGAAATTGTTCT
TATGTTGTTCTCTTTTCTAGGGCAAAACTGAGTTTTTAGGTTTATTACCC
CATCTTTACAAAAATAATACTTTAGAGGCTCTTCGAATTCAGCCATTCCA
AATCAAGCATTGTTCTTAAAGTGTTCTCATTTTTGGCCTTTTTGAGCATC
ATTGTTCTTATGAAAATGAGAGTGTACTGGTCGACTTCACTTCCTCTTTC
CTCTAAAACTTTGTTTTCCCTCCTCCTATTTTGCTGAAGATACCACCACA
GCGATCCTTCAAATATAGGAAGTCAATTTGAAAAACAAGGTACGCTACTG
TACATAGGAAGTTATAAAGCATTGATTTTATATTTGACTGTTTTGAGATT
AAGGTCACGTTATTTTTATTCAACCCATGCTGAAAAGTTCAACTACAGCA
AACTATCCAGTTGTATGTTTTTTAGTCGATCCAAACGATAACAATTAATT
TCCTAAGGTCAGCTCAAAGTTGTGTGGCTTTTCTAAGATAGTATAAAAAA
TCCTTCTTGCTTATTTCAAATCTTTGTAACATTATAAGCGATCTAACCGC
GTCACTTTTTAAAATGATATTCATCTAACAGTAAGATTAACAATTTAAAT
GTCACTTTATGTTACAGATCTACACCATTTACATTATTCCATCGAGAAGT
TGAAGACTATTAATATTATCATCGCACAACAGGCATGGTGAGGTTATTTT
CAATCTACCATGTCTCGTTCAACTGGAAAAGCGTTTTATAAACATACTTG
ATTTTTGAGAGAGATGTGTGTCTGCTATACATGTTATGACAGTGTATAGG
TTCAATCAATACATTGTCAATCGGGTGACGGACAGGGATCTGGTTTTATT
TTGAACGTATTTTAAAATTGGTTAGAAATTATGTAAATGTATGTTAGAGA
CTTCGATTTGAACGATTTTGAAGGCTTTCCTGTGTGTGCGATCAACGTTG
AGGATATTGATTGAATTTTAAGAAACACACCAAAATGGCTAGCCAATTTG
AGGTAATGTCAAATTTTTATTGGAGTTTCATTTTAGAATAAAGTATTATC
GTTACTCTACACCTCGAGTGTTTTATTAACAAATATTTTATCTTTCTCAA
TTACCAAAGTTGATTATATATTTTATACTATACTGGGCGAAATAAGAGAT
TTCCAATCCTGGAAATATCTTGAAAATATGATAATTCCATATACTTTTGT
AAATATGGAAATATGACTGTTCTATATTTCCAAAGTTGTAGAAATACCAT
ATTTCATGATATTTCCAAATCTGAAAAATCATATTTTCAAAATATTTCCA
ACTTTTGCAAATATGATATTTCCAAAATTGGAAATATCTTGAAAGTACCT
CATTGGAACTAATTTTTGCGGGAATTAATTTTTGAGTTTTTCGCGGTTTT
TCGTCAAAATCGCGAAAATTTTAACCTGCGAAAGATTTTGAGAGTTAAAA
ACCGCGAAAATTAAAACCCGCGAAAATTTCAGAATGAAAGAAACTGCGAA
AATTAAAACCCACGAAAAGCAATTTTTCGGATATTTTTTTTCGACCGCGA
AAATTAGTTCCAATAAGGTATGTTTGAATGAATTTCAGAATTGGAAATAT
CATGAAATATGATATTTCCACAACTTTGGAAATATAAAAAAGTCATATTT
CCATACTTACAAAAGTATATGAAAATATCATATTTTCAAGATATTTCCAG
GATTGGAATTCTCTTATTTCGCCCAGTGATATAGATGGGAACCCGTCGAA
ATTTTTATTGATTTTCCACTCATGTGAGCTTAGTGAAATGGGAAAATTAA
AGTCTATTTCAAATTAGCTGGCAGTGGTTTTAGCTTTTCACTCTTTGCTG
GGTTAATTTTTTTTCCATTTACAGATTAAAACACTCTCTAGTTTAACACT
TATAACAGGGGTTTTTCTAAGCACTTTTTTATGTCCGTATACCAGCCAAA
ATACTCAATCTAAGATTGGGTTTTGGAAAATCAATCCAAAATATAAAATA
TATTTTCTAGCAAAATTAAACTTGTTTGTTGTTTACAAACAAAAATCTCT
AATATTACATATTCAAAATATTTTTGGGAGCTTCGCCCTTTGAACACCAT
AACCAAACCCCCAGCTTCATCAATATACAGCTTTACTGAGAAAATTCCCT
TACAAAGAATGGCCCCAGCTCAAAGTGCTTAGAAAAAATCCCTGTTATTA
TGATTACCAATATCTTTTGATGATCTATATACCATATCTTGATATCGAAA
ACCTCTAAAAGCAGAGTCTCCTTTACAAGATCAGGAGATTTTTTCTGCTG
CGTTCTGCTGCAAACATCTTTAAGAACTTATTGATAGACAGAGTAGGCTT
GTTTATTATTGGTGAAATTGTTTTGTTTTTTTTCCATTTCTTACTTAGTT
AGACTTGGTCATTTCGAAAGGGAACCCAATGAAAAAGAATGCAAATAAAT
TGTGCTTTCGCCATGGACTTTGACAACTGTTTATAAGAATCGTGAACCTT
ATATGTTTCTTATATCTAACACACTGGACTTTGGAACGCCCCTTTTTATT
GGATAAAGATATTTTTCTGACAATTTGAATTCTCGACAAGAAATACTTTT
GAGGTAATGTTCCTTGGTGCCACGTTGTTCTAGAGTTGATGTGTAATTTA
CCTGGGAAACGTGATTCGTGTTGTTTTTTCTTTCTCTTTTGGAACTTTTT
CCGCCGTTTTGTTTTTAAATTTGAGCGTAAAATCTCCCTGCGAATGAATC
GACTGGCGATACAGTTGCAAAAACACTAAATTATGCCACTTCCGTTATGA
AAGTCCTTGTTTTTTGTTTATTTGGTGAGATTCTGGGATGACCGAAAACT
CCAAATCTTTAAATTTTTACTCTGATTTAGATCACAATCCAAAAAAACTT
AAAAATACCGGAAAATACATAAATTACCTTCGTGTTAATTAAGTAGTGAT
CATGTTTTTGCAACAGCACGATCGATGTATAGGCCTTTTCATAAATTATT
TTGAGTGCAACAAGTGCCTCGTTTTAAAGCCATCACCAAGGTGATTAAAT
CGGTCGAGTCTCCGGTGTTACTTTTAAAAGTAGAAATTTTTATCATGAAC
TCCCCCCTAGTAATCAATTACAATAGCAATATTTTGAAAACGAAGAAAGC
GCGTTGGTCCCGATGTGATTTTATGAAAAGATCTATTGGTATCGAAGTTG
TGCATTTATATATACGGGGTTTGCAAAAGAAACATGGCCAGACAAAAATT
GTGTTACTTGTAGAGCAGTTATTGCCTGAAAATTATATTTCTCTTTTTTT
CATAACCTTGTTTGTTAGTTGGTACGGAACACATCACCATTCCTTCATCT
TATTCTTTGTTCTACTCTTTCCCATCCATAGGAAGACCACATTATGAACG
AAGAACAAATCGGTGAATATCGAGAAGCTTTTGAACTTTTTGATAAGAAT
AACGATGGAAATATCAGCATCAAAGAATTAGAAAAAGTTATGAATAGTCT
GGGACAGAACCCATCAGAAGCTGAGGTATGATTTTCCCAGATTTCCCAGC
CTTCCTCGTATCCTCGAACGAAAAGAGGTATATGAATTAAACATAGGCGA
AGCGAGAAACCTTGGAAAATTTCAGAGGGAGTGCAGACTTTTATGATATA
TTCATTATATTTTGATAAAACAAAGACAATAATTACAGTGTCGTTAAAAC
CGCTCTCATCCATAAATTTTACAGGATCTCGCTACGCCTATGATTGTAAA
CTAAACTATGCATTAGTTTGATCTTTAATAAATCAAAGAATTCTAGACAG
GTCAAAATAGCACCGAAAAGAACAATATAAAGCAGAATTAATGTACTGAA
AAACTAAAGAGTCACTTTAAAAGTGTGATAAATGATTATTGCCACACTTA
CGAGGAATTACATGTGCATGCATTTCTTCTTGGGCTTGTGCTATCTTGAG
CCTCTCTTCTATGCCTCTTGAGATCGAATCAAACCTCTTAGTCTCTCAGA
TCGCTTTTTTATGGTTCTGATAGTGCTCACCAAAATTGTACCATCGTCCT
TCAGTAAAATCAAAAAGTGGTGAAAGTAAGATCAAACAAGAAAATTTCGA
GTGTATTTTTGATAGCTATTCCTTTTTTTACCAGCTCCAAGATATGATCA
ACGAAGTAGATTCGGACGGTAATGGAACGATTGATTTCCCAGAATTTTTA
AGCATGATGGCGCGCAAGATACGGGATACTGACACCGAAGAAGAAATCAA
AGAGGTAACTCTCATTGACTTTTACATAAAAAAGGAAATCATTTTTGCTG
AAGAAATTTTTCTTCAAAATAAATGAACCAGTTTTCATTTACAAATCCCT
ATTTGCCTTCAAAGAGACGAACAGGTTTACTTTCAAAAATACATGAGCAG
ATTTACTTTCACAAATGCGTGAGAGGATTTTCCTTCACAAATACATCGAC
AAATTTTCCTTCAGAGACACAAAACTACTTATCCTGCGAAGACAATGAAA
GACTTCTTGAATCCTTAAAAAAGTTAATTTAATGCAGTTGATCAAAGCAA
GCACAAAAGTCAGAGGTTTTCCTTGCAAATGAAAAATTTACTTTGGCGAA
TTCTAGATTCTATAAAAGTGAATTCTTAGCAAGTCTAGTGTATTGATTAG
GGCGAATATGTATTTGATGCGGCGAACCGAACTTTTAGACCTGTGAAAAG
TAATTTTTTTCGTGTCTAGGACCAGCAAACTTCGCTGTTCACCAGACTTA
AAAGACGCCTGCATATTCTTTCATTTTTCCAGGCGTTTCGAGTGTTCGAC
AGGGATGGTAATGGTTACATCAGTGCATTGGAATTACGACATGTGATGAC
AAACCTTGGTGAAAAGTTAACTGAAGATGAAGTGGATGAGATGATTGCAG
AAGCGGATCAAGATGGAGATGGACAAGTTAATTATGAAGGTCTGTTCCTC
CTTTTGTTTCTTTCTTTTATTTCCTAGACTAGAGGATATTTCTAATTATT
TTAATAGAAAGAGACATCTGAGCTAACTGATGCTTAGGTCCCTCTAAGTA
TCAAAAGTTTAATAAATCACCCATTACCATCTAAAGTCTATTCACGATAA
GTGTGCACTCTTTTTTCTTTTACCTATAACTTTTGAAGGAATTCTTCAAT
CTTTATAAATTTGGTATCGTTGGAGAGATATTTGTGAGTGGAACAATTTG
AAATAAAAAGATCTTCAAAAGAATTCTAAAAATGAAGATGAAAATGAAGA
AGAAAAAAATGAAGATCTTGTAGAAAAGTGCTATAACTTTCATTTTCACT
GGAGAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCAATACAAAGTTATGATACAAAGTTGATAAGTGATTGACCCC
AAAAAACAGCAGAAAACAGCAGAAAACAGCGTTTTTAGACGTCAATTAGC
TTATAACTTTCTTTGATATCTTTTGACTGAATGATTATTTCTGAGAAATT
TTTTCACAGTGATGACGTTCGATGATTAAGGATTTACTTCAGTAAAAATG
ATAGTTGTAGCACTTTTCTATAAGATCTTCATTTTTTTCTTTTTCATTTT
CATCTTCATTTTTAGAATTTGNNATCTTTCCAATGATACCAAATTTATAA
AGATTGAAGAATTCCTTCAAAAGTTATAGGTAAATGAAAAAAGAGTGCAC
ACTTATCGTGAATAGACTTTAAAAACTTGATTTCATCGTGAACATTGTTG
AAATCAAAGGTTTAACTTTGAAAATTGTGAACGATTATCCTGATGATAGT
GGATCACATTATTTCTCACCAGATTGCTTGTAAAAATTTTCAAATTTGAT
AAAGTACTTGTTTCATATTGCAGTAGTTTTGAGATGACTAAAATTTGGGA
TATTTTGGCTCATTGACTTAAAAAACATCTAAAGTTTGTTCCAAAAGATT
GACATTGCACTGCATTTGAAATAAAGAATTCAAAAATTTCGAAAATGAAG
ATGAAGAAAATGATGATGAAGAAAATGAAGATTCTTTCTACTTGCTCACA
AATTTTGAATTCATACTTTTCTGAAACTTTGAACTTGATTGCTGATTTCA
AATATGTTTTCAGATACTTTATAGGTATCTTTATTAGATAAAAAATTACA
GCCCTCCGAAGTGGTTCCATTTTTAGCCATTTTAAGCCTATTTCGAAGGG
CTTTTAATACCTTAAGGGAACTCATTTTGGCGGAATTAGTTCCCGCCAAA
TTATTATTATTCTACATCCAAATACGCTTCCAAAAATGTATAGTTTGTTA
TGGTTTAGGGGCTGGAACTGGGGCGGAAAAATTAATGCAATTCTGGGACA
TGCATTAAGTTACCCGAGCCAGGGTTCAGGTACCCCCCACCATTTTGTTA
CCCCCAAAATTTTCAGAATTCTAAAGTAGCCCCCTACTTTGAGTTTTTTA
TTAAAAATGCAATAAAGAATTTTCTGCTCTTTTGTCACTCCTAGGAAAAT
ACTTCAATGGTGAGCATCCCTTCGTTTTTTAACAAATTCAAGGGTTTCTA
GAGTTTTTAGTTGATCTTTGCTAGTTTTAAAGGATTTCAAGAAGAAGTCT
GTCGACAATAAGAGAAAGGTTGAATTTTCAAATCTCAAGGTTGAATCCTC
AACTCCCTTAAAATGCATAAAAAACCCCTAAGACGTTTTCTTTAACAAAA
TCAATTTAGGAATACTTCCAGGTCTGGCTTTTTAAACACTTTTTTTTTGA
GGTACCCGCATTTACAAGTACTCTTAGGTGCCAAATAAACGGGGGGGTTG
GAATAAACGGGGGGGTTGGAAAATTTTTGAAATTTCAATAAACGGGGGGG
ACCTAATTGCCGGGGGGGGGTGGAAATTGTACTTATGAAAACCCCAAAAT
AAGGGAAATATAGGCTAAAATCAGGCTTTTTGGACCAAAATAAGGGGACT
TCTTTTAGCCAACTGAAAATATTCTTTAAAATTAATAAACGGGGGGGGCC
TAATAAGGTCCGGGGGGTTGGAAAATTTTTGAAATTTCAATAAACGGGGG
GGACCTAATTGCCGGGGGGGGGTGGAAATTGTACTTATGAAAACCCCAAA
ATAAGGGAAATATAGGCTAAAATCAGGCTTTTTGGACCAAAATAAGGGGA
CTTCTTTTAGCCAACTGAAAATATTCTTTAAAATTAATAAACGGGGGGGG
CCTAATAAGGTCCGGGGGGTTGGAAAATTTTTGAAATTTCAATAAACGGG
GGGGACCTAATTGCCGGGGGGGGGTGGAAATTGTACTTATGAAAACCCCA
AAATAAGGGAAATATAGGCTAAAATCAGGCTTTTTGGACCAAAATAAGGG
GACTTCTTTTAGCCAACTGAAAATATTCTTTAAAATTAATAAACGGGGGG
GTCCTAATAAGGTCCGGGGGGGTTGGAAAATTTTTTCGAAAAATTAACAA
GCGGGGGGACCGTTTATTTGGCACCTAAGAGTACTTCTCTTGGGATTGGC
TTAAAATTTAAACGATTTTTAAAGATTCAAAAAGTAAACAAACAGACTAA
TTTCTTAACGTAAGTTTAAGTAAGAAACAATGGAAAGAAACAAAAGGCTT
CCAAGGCCAGGGTTTCTTATAGGGGCTATGGTATATCTTATTACACAAAA
TCAACTAGACATGGTTTGCACTAAAATGCTACCGTTATAATAGCATTTTA
TAAGTTAACATGCTTAATATTGTACATAATTCCTTGTTTGTTCTGTCTGT
AAAAACTGCACTTTTTTCCCATAAGAAAAATTTTATAAGAACAACGAGGC
TCAAAATCGCCAAAAATAGGAACAATTTAAGCATAATGCTGAGCCTGAAA
TTTAGAGGTTAAAGTAGTAAAAATTGGGTAGAACGCCTTAAATACCTCGA
TTACACCTTGTAAAAAAGTACAGGATAAAGCGATAAAGTGATAACCCAAA
GTTATATGACCGTCTATCAAGAGTTATAAATTTGATTCTTATAAAGTAGA
TGCCTGTAAGAAATATACAAATATGCTCATATTACGCGTCCTCCCTTCTT
CACTTTGTAAAAACAAAACCACTTTCATTTTCATGAAGAGAAATTCTGTC
TATTTTAAAGGAATCCCTTTATAAAGTTGAAAGACTCACTTTGCTCAATC
CTTGAAGTACAGATTCCGGTTTTGGCTCATCTCCAGCCATTTTCCAGACA
GAGCACGTTTGATCATCGTTGTTGCGTAATACGGTCAATCGCTGAAAGAA
TTTTAGGTATTTTAGTTTTTTATTTCGATTTGGTTATATCGCTAGCAGAT
GATTTTTTATGAAAGATAGAAAAACAAATTTCTTAACAAAAAATGGAGCA
GTATATAGGAGAAGAGGTATCCGCCAATTAAAATAATTTCTGTCCCAAAG
AAAATGGGAAGATTGTTTATTTTAATGTGTTATTCTTGAAGAAAAGAGTA
ATGTGTCGTTGGAAGATGATTTTAAGTGAATTCAAGGCTAAATTGAAAAA
TTTTCGAAGAAAAGAATCATTGAATGATATGATTTTTAGAAAAATTCTTC
ATTATCTACACATTTCTTCTTTATTTCTAGCTTTCTTAAAAATCAAAATT
ATTCTCCTTGAGAATATCAACGGTATACACGTTGTTTTTTTTATAAGGAA
CACGTTTATAAGGAACTCGAGGCTGAAAATGGTTCAAAAAATAAGGAATT
GTTAAGGAACTGCTCAGGCTGAGAATAAGTGGATTTGAAAATAATGTACC
TTATTGGGACTAACTTGACCAAATTTTGATCTTTCAAGGGGCAAAAAGTT
CAAAATTTCCTATGTAGTAAGGAACTCGATAAGGAACTTTGAGACTGAAA
TTCTCTGTAAAAATAAGGAACTCCAGGCTCAGAGCAAAGTTAAGGTTCCT
TATAAAAAAAAAACGTGTATAACTTTTCAATAAAGAATAAATGGTTACTG
ATAAATTGTTAAAAGCTTTGTGTCCTCGTGCTTTTGAGATTAGGATTCGT
TAGGATCGAAAATTAAGTAAATGTACCCAGCATCTTTAAAAAGAACTTAC
ATTTTTGAAGTCCTCCATGTAAGTGACATGAGGCCGGCCTTCATGGTGAG
GAACGTCGTAGATCACAATGTTGTTCTTTTTATCCACAGAGATCTTTTCT
TGGTAATTGTGACCATTCTCGGTAAACGCCAAATTGTGTGTTTGACACTG
TTAAAAGATATCAAAAAATAGACCTTTGTATAAATTACGTCACGAGCAAC
GCTGACCTCGTTTTCAAGATATTGCTATGGTAATTGATTCCCAAATAACT
TCATAAGAAGATAACTCTATTTCTAAAAGTAACACTTGAATATTCAAGGG
ATTTAATCGCCTTGTTAATGGCTTCAAAACGAGGTAGTGTACAGTTGCGA
TCAATAATAATTTATGAAAAGGCCTATTGACATATCAATCCGATGTTTGC
GAACACGGTGACTTGGAGTGAGCTAAAAATTATGAGACCACTACGTTTAG
CTATTTTAAAGATTCTTTTCTGTCTTTAGCTTTAATTTCAGAAAACATTC
TTGTTTAGCTAATCAATAGTAAACGCGATATGCCAATCCGGGTTGTATTT
TTCTATCTAAGCAGCTTTAAGTCGCACACAGAATAAAGGAAAACATACCT
TGATAGCGACCAGACTTGCTAGCGCCAACACGACAAAGTTCAACAAAATC
TAAGAAGAAAACAAGATACGATATACTCGCAAAGGACTAAAAATATTCCC
GAAAAGGGCTGGTTAGCATACAATACCCATAAAGAGGCCCATCTTATTCT
GGTTAAAATATAGAGATAGTTGTTGAGTAGTTTAAGTCACGCCAACTTAA
TAATTCCAAAGTTTAGAAAAAACAATGTATTTTATATTCGACTTTATCTC
TAGAGTGCTTTACTTACATTCATCTTGAGTTTTCTTCAATGTTTCTTCTT
TTTGAAATTTCTTCCAAAACTTGTTGATGGTGGTAAGAGAAGAAACTGGG
TGTTTTATAGGGATCTGTAAGCACCGGATTGGCAACTAATCTAGAAAAAT
ATATTCCCATTCGTCAACTATACTGGAAAATGACTAGTCATTTTTCAAAA
AAACACTTCAAAGTATTGTTTAAACATCTGAACAAATTATTTTTTTCTCT
GAAATGGATAGTGGGTTGAATATTTTTCTGGAAACTTACTCGAGTGAGTT
ACAATCCCGTTGGGAGGGGGTACTCCAGTTGGCAGATGACGGGTACGTGC
AGACGGAACCTTCCAAAACCTACCCTTAGAGAGACTAATTTTTTGCGAAA
AACTGACCCTTAGAGTAACATTTTTAAAACAATTTCTTCGATTTTCAAAT
AGTTTTCTACTCTTAAAGAGATTATTTTGCAATTTCTTCTCTTGAAACTA
AAATATTTCTCTAAATATATAAAATCACAAAAATTACAAGTACTGTGATC
TTGAAGTTTTTACCAGTGATAGTTTGTTCACGAAGGCTGATACGTCTAAA
AAAGAGTCAGTCTACTGTCTCATAAGTATGTTATTTTATCATAACTTTTG
GTCTGACCAGACTTTGAGCTTGCATCGTCATTAAGGAAAGGTTGCTTTAC
TATCTTGTATATTTTTTTCCAATCTAATTTGGGTTTCATCAAAAGTTACA
GCCATCCAATCTTCGCTGCAGATTATGCTGAGACAGATCCAAGGCGATGC
TATCGTCCGTTAGAGGGTCAGCAAACGAAATTTTTCAATTCTGGAATACA
GTAAAATAGGGGTGGTTTGGGCGCGAAAAGGGCAATTTGGGTCTGTAAAA
TTCACGATATTCTTCAAAAGCTTATCATGAAATTGCGTCACAAAAAAGCT
CGTGGAGATTTTTACACCCCCTTCTCACAGACCCGGTAGGATTTTTTTCA
GCCAGTGGGGTTAAAAATAACGGACCAAAACTTTTAAGGCTGGGGTTTTG
AGTTCCATTGTTTTCAAGCCATAAAATTCAGTAGTTGGAGTGAGGATTCA
CTTACCTTATCACGGAAAAAAGAGTTTTATTTAGTCGGGGTTTTTTTCCT
TCGGGGAAAGATTTCGTCACTTTCCCCCGATCAAAATTTCAAATTCGTCA
CTTTTCCCTGACGAAATTTACAATTTAGTTACTTCAAGTTACTTTAGTTA
CCCAACTAAATTCCTTCACTAGCTCGAAAAAAGGTCTTTTAATTCGACGT
TTAAAGCACTAATTTCGGTTAATAAACGTGTAAAAAATTTAGATTTTAAT
TTAGCTTGGGGTTTAAAAAATCGGATAAACGTTTTGGTCAGGGATAAAAA
AATCGGGTAAAAGTTTTGGTCGGGTGATTAAATATCGGGGAAAAATTCGT
CGGGGGAAAATTTCGTCACGTCCTCAAAATTTTCATCACTTTCCCCCGAC
ATTGTTTTCCCCGATAAGGTATCTGATTGTTTTCAGCTGGGACAAAAATT
GGAGTATACTTTTCCACTGAAGACGATAATTTGGCCAATTTTTCCAGTCA
AAAGGGTTCCCATTGGGTCTGTGAGAAGAAGTGTATCTTTTTCGGCGCTG
CATTTTCAGTTATCGCTTACTTAAGGTCAATATGCTTGGGGATTCAAGTA
ATTGCTTTAAAGTTTTTACCTCGGGAAACAAAAGGTGTAACCAGGATTAA
TTTTTACGATTTGGCCAATTTTTCACCCTGATATTCTTATAGAAGATATT
CTTATACAAAAAAACGTGTATATCGATATGCTCAATTGAAAATGAACCCA
ATTTCGTACCCAGAGCTACTTGTACCACTTTTTGATTTTACTGATGAACG
TGATTTAACACCCCTGTCTCACACCCCCGGTGGAACTTTTTCACTCAATG
GGGGATAAAAACTCCTGTTGAAATCTCAATGGGGATAGAAATTCTATTGT
TTCAAGGTTAAAAATCCAGTGAGGATGGGTTTGGAGTGTAATTTTCAAAC
ATTGAATTTCGAATGGGGATGAAATCAAAGTCAATTTCCAAGTGGGGCTG
ATATTTTAGGGTATTTTCCCACCAAAGAGACGAAATTTTTGTCAAATTTT
TCAGTGGGGCTGAGGTCCCAACGGATTTGTGACAGGAACGTGATAGAATT
CATTAGCGCTATCAGAATCATAAAAAGCGAACTATAAGAATGGGTTCGAG
TTTGGAATGAAGTTAGTTAAATAAAAAAGAATAAGTGCAAGAAGCTGAGA
AAACATATTTGTTTTACGTAGGTTAGAGGACCTCTTGAAATCTCTTTAAG
ATTTTCAGCAAATAAAGATCTTAATGGCCGTATTTTTATGCAACGTATCA
GATTTTACCAAAGTCAAAATGGCCGAAATTGCGTCGAGCACTATGATGCA
AATTGTATATTTTATGATTTTTTTCTTTCAAAAAAAGTGTTCTAAATATT
GGATAGAGAAACATTTTTGTGAGATTAAATCAACCTTTTGGTCGTTTGCT
TGACAGATTTTCACTATTCAAATCTCTCGAAAAATCTTTGGCGGGCGCAT
GCCCATTTCTCGAGACAGTCAATGTCAACGACATCAAAATGTGGCTATAA
TGTAATAATGTATTTACCACTTTTTATCTACAGAGTTCACCAGACTGATG
TTATCAACCCCAAGATGACGAAAATGCTCATGAGGTCAACACATGGAAAT
ACATCAACAGACAAGCTAGGAAGATAGAAAAGAGACTGGGCGATAATCTA
TATTTCTAGTGTTGTTTAATGTAAAATTCAAGAATATTGTACACATTATT
ATAGTGTATTTTTTCTCTTTTTTAGTAAAAGTTTCGGCGGGAAAAATTGT
AAATGTATTTATAAGAAGATATTAAAAGAAAAATATTTAAAATATTTACA
AACTTACAAATAGTATAAAACTCCCTCACATTATTAAAAGATTTTCATCA
TTTGATCAAAATTTCACACCCCTGTCTCGCAGCCCCGGTGGAGCTTCTTC
TCACGGCGAAATTCCAATAAAGATAGAAATTCTATTTTTCCCTGACACAG
GGGTGTAATTTTGTTACCTTTTTTCGATGTAATCAGTTCAATCGAAATGG
CCTCAGTGTCGACCCCTGGGATAGGAAACTTAGGCAAATTAGGAAAGAGG
TAGTGCGAGAGATAAGGTACCTTTTTGCACCAAGTACAAAAAACTTCCCT
TTCTAATATAAGTGTTCCAAAATGACGAAAATCGATTACATTACTTCGAA
TAAACGGTAACTTTTTTAGATTGTCCCGTCGAATAAACGCCCCTCATTAA
AGGAAAAGTTTTTTATATGATGGCTCCCAAAATAAACGCCTCCTCTCTAG
AAGGGACGTTTATCGGCTGAAATTGTGTCCACGAAGTATAAACTTTGACG
TAGAACGCTTTTCATGCTATCTTCAATCATTAGAACTGCAACTAACTAGC
TGTTTTGTTCGACATTGCAGTTTTTGAGAGTTCCCTGGAGTTAGATTAAA
TTTTGGTCATGCAAAGTTTGAAATTTATCGCTTGAATAGCGCTCTAAATC
GAGATTTGAACTATATAGACACATTTTTGAACAACTCGGTGTTTAAAACA
TCAAGATTTAAGAGAACTCTCATATTCATGATATTCATGACGTAATGTTT
TCTACGGAAATACCTCGGTTTTAGCCAGTAGTGGCAAATTTAAATTAGAC
AAAATTTGTATAAAATTTGCCACTACAAACCGGGAAAACATTACGTCATG
AATATCATGAATAAAAGAAAACTTCAGTATTTATTGATTATTGTATCAAA
GCAATCAAAGTGATTTTCATCTACTTCTACGTCTCTAAAAGGATATATTT
GTACATTCCCACTCGCCCTATCAAAGTGACTTTGGACGCCCTGGGCGTTT
ATTCGAGCTACTACGAAAAAAAAAACAGCAAAACTTTCTCTAAGAGTCAT
TTTATTTTTTGAGATTCAATGTCAATTTGATCAAATTCGCCATACTAATA
CAACCGGCCAACAAAACCAAGTAAAAATTCAATGCAAATCTTTCAGATAC
TTCAAAGTGTTGGTGTTGCTCAAAAGAAATGTTCGAATCTGATCCACCAT
CAGCCGTTTGAGGGTTGTTATAGTCTGAATTTTTAAAACTATATAGTATA
ACAACTCCCAATGAGAAAAATGTCACAAATCCTTGTATTAGAAATTGCCA
GAGTCTTTGTCGACTGTTGGTGTAAATGGAATAAAGCAAATTGAATACTG
ACATCAAGTTTATGACGAGTCCACAAAACATAAAAACCCAACAAAGCATA
AGCCATTCAGGTATCACGATTTCTTTTTCCGACATTACACCACCAAAAAG
TTCAGCCGTTTTAAAACAGCCTAAAATTTTATTAGTTTGAAGTTCTATAT
CGCAATATTTCCATATTCCAACATAAAGCCTTTGTTTAACACCATTATTC
AAAGTCTGCATGTTTTGAATAGACTTTGTGGTGTACATTGGTGTTGTTGT
TACATGCGACCAATGAATATCCACTGACGAATGCATAAGTAAGCAAAAAG
TACATGAAGTCCATACAAAAGCACAAACTGTGTTCTTTCTACAAGTTGAC
ATTTGTTTAAAAGACATTTTCCACTTAAACCTTCTATAGATCGATTGAAT
ACGGCGTAAAAAGTGACAATTTTCTCTAGTACTATTCCTCCAAAATTGAA
TTTGAGGTTTTTCATTCGATTTTTGTAACATCGTTTGCGGCCAACTTCCA
CATCTTTATTGCCTCTCTCTATATAAAATATATATGGAAAATTAAACTTC
AACCATATACTTATAGATATGTTGTTTTACAAAAAAGTAAAGTATAGATA
TCAATTATTATAGTATATGGAATGTTGGAGAGAATGATCGATAGAATTTT
TTATTACTCCAAACTGTCACAAATCTCCAGAAAGTGAAACTGAAAGTAGA
CAGCTCTCTCTGACTGGATAAGCGTCGAGGGGTTTTGTTCAATTTAGATA
TCGATGTAAAAGATTTCTTATATTGAATATTTCTCTTGATGCGATGTGAC
GACGAAGGAGAAAATTCTAGCATAAAATGATAAGCTCCGGTTATCAATAT
TTTAAATCATATTGTTTGATAATTTGATGTCCTAGCGCCTGTTATATAAC
AAAGGATACATTTTCGTTGATGATGAAGATTTCGGAAGCCGTGGCTTCAT
TTTGTGTCAAGTCATGCGCTACTAGGACGAACAAGTGTGTTGATATATGT
AGACTATAACACAGACTAAAACTTTGGAACTTTGCATTTGCTCAAATTGC
ATCACCAACCAATCTTTGACGATTTTTAACAGGCCCGGTGGGAACGGGGA
GACTGGGGAGACTTCAACCAAGGCTATTGAGATTTTTTTCTCAAATTCCT
AGCGAATTTTATCTCATTTTGAGCTTTCAGCCTCCCCCTCTTTAACGGTT
GTTCCGCCGGGTTTGTTTAAAGCCTTCACATCTTCGAATTCACACAAATT
ATAGCAAGTAAGAGAAAAATACTGCAATGTGCTTTATTAGAACAATTTCA
TAACAACAACCAGGCTCAATAACACCAGATAATAAGAATAATCTAAGAAC
AAATTTGAGTATGGGATAGTCA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_035681	XLOC_035681	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_279	supercontig	scaffold_279:34744..50715 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0.0681434	0	0	0	0	2.33955	3.86014	0.111799	0	8.41077	6.34695	0.290858	0.417032	0	0	1.97209	2.1411	0	0

Blast

[Close]

BLAST of TCONS_00056654 vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 4.349e-71
Identity = 112/144 (77.78%), Postives = 130/144 (90.28%), Query Frame = 1

Query:  169 MNEEQIGEYREAFELFDKNNDGNISIKELEKVMNSLGQNPSEAELQDMINEVDSDGNGTIDFPEFLSMMARKIRDTDTEEEIKEAFRVFDRDGNGYISALELRHVMTNLGEKLTEDEVDEMIAEADQDGDGQVNYEEFTRLMLS 600
            + EEQI E++EAF LFDK+ DG I+ KEL  VM SLGQNP+EAELQDMINEVD+DGNGTIDFPEFL+MMARK++DTD+EEEI+EAFRVFD+DGNGYISA ELRHVMTNLGEKLT++EVDEMI EAD DGDGQVNYEEF ++M +
Sbjct:    5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148

The following BLAST results are available for this feature:

BLAST of TCONS_00056654 vs. Swiss-Prot (Human)

BLAST of TCONS_00056654 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CALM3	4.349e-71	77.78	Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1	[more]

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TCONS_00056654 (transcript) - C. hemisphaerica