Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056664 ID=TCONS_00056664|Name=TCONS_00056664|organism=Clytia hemisphaerica|type=transcript|length=1228bp atttAGAGCTAAATTTTAGCTCATGTTAATTCCGCAATCAGCAAGTCAAA CGCCCGGCATCATATGGCGGGCTAAAACTGCACGCTCACTCCTACTCGTC CCAGTCCCACGGACTCCGACTTGTAGCGTTTAAGTTCAGTCATTCAGTTC ACCTCATCCTCTCATGCATTCAAcacaaatatttttgctttcttggTTAA TCAGAAATAAATTGCTCTCATCTTCAACTTCCAACACGACGACGTCAACT GCATCTTCAATTATCAATTCTGCGTTATCTCTCCTATCGAACCCCACACA CCAACACTCAAAAAAAGTANTCAATTATCAATTCTGCGTTTCTCCTATCG AACCCCACACACCAACACTCAAAAAAGTATGTCCACCACCGTGACCCACC GTTGTTCCAGTTACGACCTCATCCGACATCCTGTTGAGTCAGCATTATTA CGATCCAAAATGGTATCTCTAACTGTGGTATTCCTTTTTCATCACAACGT CTGGACCTGAACGACTGTAAAATTTATATCTAACTCCACCCAAGATTATC CAGCAAATCCGCCTGGGTGAGtctgttgttttttattattttactgCCTG CACACTTGGGGAAGGCCCATTCGTCGCCAGATTCGTTAATTTTCGATGGG GACATCAACCAATTGCCATAAAGACACTGATCCCAGCATTCTCTCCCCAA TTTCAACTTGGCCTTGAGAATTACATGTCCCCTCCCCTTGATGATGGGGT GTCCTTTCTTCTGAACCTCTATTAGGTCTCCGCCACACTTAGCCAAAAAA AATGTCTGATTATTACCAGAtagttttgattttctaatttgtATACATAG CATGGGGGCAAGGCACAGTATAAGACAAGGCATGTCATTTAGGAGAACGT ACATTTGGACTGGTTTTAGTTAAAGTATCCCTCTTGTAAGTTGGTCACCA AACGTCACCAAATCCTCCCCTCTCTGACAATGGTGTGTCATACATCTCTT TAATAAATCCAATCAAGCCTCCCCCATCATATTGAGCCAACGAAATGCCT GATTATTATTAGATTATTTGTCCTTTCTCCTTCTTGTACACATCGCAAAG GCGTACTTCGGGCTGGTTTTATTTAACATTCGTCCTTGTAATATGGTCCT CAAATATCAACCCACTTAGCCGTATCTCCATTTAGCGGTTTTTGTTTATC TTCCTGCCTTTGTCAACCTGCATTGCTC Run BLAST on NCBI transcript from alignment at scaffold_280:8769..10030+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056664 ID=TCONS_00056664|Name=TCONS_00056664|organism=Clytia hemisphaerica|type=transcript|length=1262bp|location=Sequence derived from alignment at scaffold_280:8769..10030+ (Clytia hemisphaerica) atttAGAGCTAAATTTTAGCTCATGTTAATTCCGCAATCAGCAAGTCAAA
CGCCCGGCATCATATGGCGGGCTAAAACTGCACGCTCACTCCTACTCGTC
CCAGTCCCACGGACTCCGACTTGTAGCGTTTAAGTTCAGTCATTCAGTTC
ACCTCATCCTCTCATGCATTCAAcacaaatatttttgctttcttggTTAA
TCAGAAATAAATTGCTCTCATCTTCAACTTCCAACACGACGACGTCAACT
GCATCTTCAATTATCAATTCTGCGTTATCTCTCCTATCGAACCCCACACA
CCAACACTCAAAAAAAGTANTCAATTATCAATTCTGCGTTTCTCCTATCG
AACCCCACACACCAACACTCAAAAAAGTATGTCCACCACCGTGACCCACC
GTTGTTCCAGTTACGACCTCATCCGACATCCTGTTGAGTCAGCATTATTA
CGATCCAAAATGGTATCTCTAACTGTGGTATTCCTTTTTCATCACAACGT
CTGGACCTGAACGACTGTAAAATTTATATCTAACTCCACCCAAGATTATC
CAGCAAATCCGCCTGGGTGAGtctgttgttttttattattttactgCCTG
CACACTTGGGGAAGGCCCATTCGTCGCCAGATTCGTTAATTTTCGATGGG
GACATCAACCAATTGCCATAAAGACACTGATCCCAGCATTCTCTCCCCAA
TTTCAACTTGGCCTTGAGAATTACATGTCCCCTCCCCTTGATGATGGGGT
GTCCTTTCTTCTGAACCTCTATTAGGTCTCCGCCACACTTAGCCAAAAAA
AATGTCTGATTATTACCAGAtagttttgattttctaatttgtATACATAG
CATGGGGGCAAGGCACAGTATAAGACAAGGCATGTCATTTAGGAGAACGT
ACATTTGGACTGGTTTTAGTTAAAGTATCCCTCTTGTAAGTTGGTCACCA
AACGTCACCAAATCCTCCCCTCTCTGACAATGGTGTGTCATACATCTCTT
TAATAAATCCAATCAAGCCTCCCCCATCATATTGAGCCAACGAAATGCCT
GATTATTATTAGATTATTTGTCCTTTCTCCTTCTTGTACACATCGCAAAG
CACAGTATAACACTAGGCGTGTCATTCTAAGAGGGCGTACTTCGGGCTGG
TTTTATTTAACATTCGTCCTTGTAATATGGTCCTCAAATATCAACCCACT
TAGCCGTATCTCCATTTAGCGGTTTTTGTTTATCTTCCTGCCTTTGTCAA
CCTGCATTGCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00056664-exon-scaffold_280-1491911889:8769..9867 | TCONS_00056664-exon-scaffold_280-1491911889:8769..9867 | Clytia hemisphaerica | exon |
TCONS_00056664-exon-scaffold_280-1510915933:8769..9867 | TCONS_00056664-exon-scaffold_280-1510915933:8769..9867 | Clytia hemisphaerica | exon |
TCONS_00056664-exon-scaffold_280-1575043694:8769..9867 | TCONS_00056664-exon-scaffold_280-1575043694:8769..9867 | Clytia hemisphaerica | exon |
TCONS_00056664-exon-scaffold_280-1491911889:9902..10030 | TCONS_00056664-exon-scaffold_280-1491911889:9902..10030 | Clytia hemisphaerica | exon |
TCONS_00056664-exon-scaffold_280-1510915933:9902..10030 | TCONS_00056664-exon-scaffold_280-1510915933:9902..10030 | Clytia hemisphaerica | exon |
TCONS_00056664-exon-scaffold_280-1575043694:9902..10030 | TCONS_00056664-exon-scaffold_280-1575043694:9902..10030 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_280 | supercontig | scaffold_280:8769..10030 + |
Blast
The following BLAST results are available for this feature:
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