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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056667 ID=TCONS_00056667|Name=TCONS_00056667|organism=Clytia hemisphaerica|type=transcript|length=1414bp
NNAACAGAAGTGACTATCTTCTAAATCTATTATTTGGGTTGAAGGTCCAA
AggccaaagaaaaagaaaaggaaggaAAGGGCTCACTGAAATATTAATAA
GAGGGGAGACCGAACAACAAATTAGCAGTTCCTTATTTTGGGTAAAAATG
CTTCATCCTATTAGTTACATTGCCAAAAACAACTAAGTCTGGTTAAAATC
AAAAGGTTAACATTGAGGACTACCCATGAACCACTTGGCCACTTAATCCA
TGCCATCCCGTCTGTGAAAGGGGTTTTAAATGGACTCAGGGGTAACACCA
AAGTTGCTAAGAAGGTGGTGCCTCCACCTATTGAAGCTCTGGGCCCTTGT
AAAGCTGCCGATAAAGCTGGAAATCAGAATCTTCCCTCGGGCACTGAAAA
AAAAGGGGTGATTGTAACCAGGGGTGAGATGCAGATAACTTGCATTAAAG
CACAGGTTGCTGGGTAGTCGAATGGGGGTTCACTTGCAGGAGGGACAGTT
TGCAAAGATTAATCATGCAGACCATGACCATTGCCTCAAATAGGGAAATT
TCTGTTGGCTGGTAATTAAGGAGCATAAGGAGAATTATTGGAGAGGGGAA
TTTGTTCAAATCTGAAATAATTAGATTAGCTAAACgcccattttgaaaaa
aaagaaatgactaTAAGTAACAGGGTaactaaacaaataaaaaggAACCA
GCGAAATGAATTAAAATCATTAAATAAGTTTGGGGAGAAACCAACACGCC
TAAAACCCTCAAATTTTAGCCTGACAGGTGGAAAACTAAGTGTTACAGAA
TGACCAGTAGTTGTCTGCAACCAGCTGCTACCCGCAGCACTGatgattga
aattgaatatcatcAGTATATACAAAGATGCAGCAACtcgacaaaagttg
tataattgGCAAAATACAGTGGAACACCATCAAAGACCTGACGAGAGCGA
CAGACCAGGAAGAAAGGTGTGTACGTATTTATTTGAACAGAGAGTAAAGA
GGAAGTTCAGGAAGGTGGAATTAGAGGCAAacctaaaagaaaaagacata
AGATCAACTACAGAGGAACCCTTGATTGAAGCAGCATGATGATTCGACTT
GGGAGAGTCAAATTGAATAAGGTAGCTGAAGCTGAGACTAAAAAACAAGA
GAAGGTCTAGTAAACACGTCACCAGAGCCGAGAACATGTAGCAAGCAAAG
GAAAGGTAAGAACGAAAGGTAAGAGAGAAAGAAGAGTAGCCAAATGAGAG
CCTTAGGAAAATTGACACAAAACTGTTTTGTAGTGGATTATCTGTGCACG
TTGACTCGAGGAAGCTTTAAGAGAAGCGTGAACAGCAAAAGCTTTGAATA
CTGGATTGTGAGTAAGATCAGCTTAGTCAAAGGACCTACCGGAGATGGGC
CCATTGACCTTCTA Run BLAST on NCBI transcript from alignment at scaffold_280:10529..11942 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056667 ID=TCONS_00056667|Name=TCONS_00056667|organism=Clytia hemisphaerica|type=transcript|length=1414bp|location=Sequence derived from alignment at scaffold_280:10529..11942 (Clytia hemisphaerica)
TAGAAGGTCAATGGGCCCATCTCCGGTAGGTCCTTTGACTAAGCTGATCT
TACTCACAATCCAGTATTCAAAGCTTTTGCTGTTCACGCTTCTCTTAAAG
CTTCCTCGAGTCAACGTGCACAGATAATCCACTACAAAACAGTTTTGTGT
CAATTTTCCTAAGGCTCTCATTTGGCTACTCTTCTTTCTCTCTTACCTTT
CGTTCTTACCTTTCCTTTGCTTGCTACATGTTCTCGGCTCTGGTGACGTG
TTTACTAGACCTTCTCTTGTTTTTTAGTCTCAGCTTCAGCTACCTTATTC
AATTTGACTCTCCCAAGTCGAATCATCATGCTGCTTCAATCAAGGGTTCC
TCTGTAGTTGATCTtatgtctttttcttttaggtTTGCCTCTAATTCCAC
CTTCCTGAACTTCCTCTTTACTCTCTGTTCAAATAAATACGTACACACCT
TTCTTCCTGGTCTGTCGCTCTCGTCAGGTCTTTGATGGTGTTCCACTGTA
TTTTGCcaattatacaacttttgtcgaGTTGCTGCATCTTTGTATATACT
gatgatattcaatttcaatcatCAGTGCTGCGGGTAGCAGCTGGTTGCAG
ACAACTACTGGTCATTCTGTAACACTTAGTTTTCCACCTGTCAGGCTAAA
ATTTGAGGGTTTTAGGCGTGTTGGTTTCTCCCCAAACTTATTTAATGATT
TTAATTCATTTCGCTGGTTcctttttatttgtttagttACCCTGTTACTT
AtagtcatttcttttttttcaaaatgggcGTTTAGCTAATCTAATTATTT
CAGATTTGAACAAATTCCCCTCTCCAATAATTCTCCTTATGCTCCTTAAT
TACCAGCCAACAGAAATTTCCCTATTTGAGGCAATGGTCATGGTCTGCAT
GATTAATCTTTGCAAACTGTCCCTCCTGCAAGTGAACCCCCATTCGACTA
CCCAGCAACCTGTGCTTTAATGCAAGTTATCTGCATCTCACCCCTGGTTA
CAATCACCCCTTTTTTTTCAGTGCCCGAGGGAAGATTCTGATTTCCAGCT
TTATCGGCAGCTTTACAAGGGCCCAGAGCTTCAATAGGTGGAGGCACCAC
CTTCTTAGCAACTTTGGTGTTACCCCTGAGTCCATTTAAAACCCCTTTCA
CAGACGGGATGGCATGGATTAAGTGGCCAAGTGGTTCATGGGTAGTCCTC
AATGTTAACCTTTTGATTTTAACCAGACTTAGTTGTTTTTGGCAATGTAA
CTAATAGGATGAAGCATTTTTACCCAAAATAAGGAACTGCTAATTTGTTG
TTCGGTCTCCCCTCTTATTAATATTTCAGTGAGCCCTTtccttccttttc
tttttctttggccTTTGGACCTTCAACCCAAATAATAGATTTAGAAGATA
GTCACTTCTGTTNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056667-exon-scaffold_280-1491911889:10529..11942 | TCONS_00056667-exon-scaffold_280-1491911889:10529..11942 | Clytia hemisphaerica | exon |
| TCONS_00056667-exon-scaffold_280-1510915933:10529..11942 | TCONS_00056667-exon-scaffold_280-1510915933:10529..11942 | Clytia hemisphaerica | exon |
| TCONS_00056667-exon-scaffold_280-1575043694:10529..11942 | TCONS_00056667-exon-scaffold_280-1575043694:10529..11942 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_280 | supercontig | scaffold_280:10529..11942 . |
Blast
The following BLAST results are available for this feature:
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