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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056739 ID=TCONS_00056739|Name=TCONS_00056739|organism=Clytia hemisphaerica|type=transcript|length=1349bp
gagcctgagattgtttttaaatttctacTGCTCCAAATAATAAAGCCATT
GTTCTGAGGGCCTAAATCTGAGGttggtgttcttataaaattgttcttat
aaatcaaaaagcgtgtaacagatcataaaaaagttttagtCAAACTGAAA
GTTTGTTAGAAAAAGAACATTGTCATTATATGATAGAAAGTATCCAAATT
CGTGACAAAACTGTATCTTTactaaaaaattgaagaagcataAAAAAAGA
GTTAAATAGATATAATGTATGATATCAACAACTAAAATTTCATACAAAAG
AATTATGatacattaaaattttaatttcaaaaatgaatccaattttttcc
attgatAAACAGACCACATCAATCAGTTGGTGGTGAACATATTTTAGAAT
GTCCACTTCTCCAGTGAGTGACCTGGCAATTCCTGGAACAATACAAATTA
ATTCTACAGCGGCCACACTTCTTAAACTTTTTCTCTCGCTCATCTGGTTG
TCTTTTACCGCAAACTGGATTCGAGCAGATAACAGTTTCAAGGACTTTAC
AGGTCTTATTTGTGGTGTTCATATGATGAGTGAACTTGGACAATAAAAGC
TTTTTGTGGTCTGGTAACTCTTCCAGGTTAACCATATGATTGATACAATT
ACTGGCAACCTCAgctttttctttcatatttGAATCAAGTTCAGACCATT
TAGAAAAATCCAACAGCACATCTTGCAGCTTTAATTCATGGCATTTCTTC
ACACATCCTTGATGGTTCTGGCAGATAATTATCAAGCTTAAAAGAATCTC
CTCATAAGTGAAAAATGACACAACTTTCAGTTTAAATTTCAATACTTCTG
CGAGTAAAATGATCAAATCGGATTCATAAATTATAGTAAAAAGGGAATTT
GGACCACCCAACAGTAATGTTTGTAACAAGTGTACAGCAATATCTCTCAG
CAATAAGTAGGCATCAGTGGCAATCTTTGAGAAACGTAGCAACTCAACTA
AAGCTTGTATAAGCATTTTATCTTTCCACAGATATTTTTTGACCACTCGT
ATATCTTTTATACCAACCAAAAGGGCACCTGAAAATAAATGTCTGTCAGT
GATCGGTTTACTTTTTAACATATCAACAACATCTTTAAGCGCCCGCTCAG
CTATGTGCTGGCACAATGTATCATTGAGTGCTGCATCAGGTAATTCATCA
TTGCAAAGGTCTAGTACACGAAAATCatgtttttcaaccaaaaaaagTAC
AAGCTCAGCAGCTTCATTAGGCGACTTCCCTTCAATTAATTTGCTCAGTG
ACTCTCTTTTCTCCTCCTCCTCTGCCATGTTCTTAATTCATTTCTCTat Run BLAST on NCBI transcript from alignment at scaffold_282:246924..249392+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056739 ID=TCONS_00056739|Name=TCONS_00056739|organism=Clytia hemisphaerica|type=transcript|length=2469bp|location=Sequence derived from alignment at scaffold_282:246924..249392+ (Clytia hemisphaerica)
gagcctgagattgtttttaaatttctacTGCTCCAAATAATAAAGCCATT
GTTCTGAGGGCCTAAATCTGAGGttggtgttcttataaaattgttcttat
aaatcaaaaagcgtgtaacagatcataaaaaagttttagtCAAACTGAAA
GTTTGTTAGAAAAAGAACATTGTCATTATATGATAGAAAGTATCCAAATT
CGTGACAAAACTGTATCTTTactaaaaaattgaagaagcataAAAAAAGA
GTTAAATAGATATAATGTATGATATCAACAACTAAAATTTCATACAAAAG
AATTATGatacattaaaattttaatttcaaaaatgaatccaattttttcc
attgatAAACAGACCACATCAATCAGTTGGTGGTGAACATATTTTAGAAT
GTCCACTTCTCCAGTGAGTGACCTGGCAATTCCTGGAACAATACAAATTA
ATTCTACAGCGGCCACACTTCTTAAACTTTTTCTCTCGCTCATCTGGTTG
TCTTTTACCGCAAACTGGATTCGAGCAGATAACAGTTTCAAGGACTTTAC
AGGTCTTATTTGTGGTGTTCATATGATGAGTGAACTTGGACAATAAAAGC
TTTTTGTGGTCTGGTAACTCTTCCAGGTTAACCATATGATTGATACAATT
ACTGGCAACCTCAgctttttctttcatatttGAATCAAGTTCAGACCATT
TAGAAAAATCCAACAGCACATCTTGCAGCTTTAATTCATGGCATTTCTTC
ACACATCCTTGATGGTTCTGGCAGATAATTATCAAGCTTAAAAGAATCTC
CTCATAAGTGAAAAATGACACAACTTTCAGTTTAAATTTCAATACTTCTG
CGAGTAAAATGATCAAATCGGATTCATAAATTATAGTAAAAAGGGAATTT
GGACCACCCAACAGTAATGTTTGTAACAAGTGTACAGCAATATCTCTCAG
CAATAAGTAGGCATCAGTGGCAATCTTTGAGAAACGTAGCAACTCAACTA
AAGCTTGTATAAGCATTTTATCTTTCCACAGATATTTTTTGACCACTCGT
ATATCTTTTATACCAACCAAAAGGGCACCTGAAAATAAATGTCTGTCAGT
GATCGGTTTACTTTTTAACATATCAACAACATCTTTAAGCGCCCGCTCAG
CTATGTGCTGGCACAATGTATCATTGAGTGCTGCATCAGGTAATTCATCA
TTGCAAAGGTCTAGTACACGAAAATCatgtttttcaaccaaaaaaagTAC
AAGCTCAGCAGCTTCATTAGGCGACTTCCCTTCAATTAATTTGCTCAATG
ACTCTCTTTTCTCCTCCTCCTCTGCCATGTTCTTAATTCATTTCTCTatc
aaaaaagtgaaagtaaTTTGCTTTTTTAATGCTTAATAATATAAAAAACC
AACTCAATAAACAATATCATCCGGTCAAAGCCATGAAAActatttatttg
ttttatttttcacatcTAACGTTAGACATGGCGGCTatctaaaatatgtt
ccgttcgcgtcgcccgaccgactcaccttcaaaacataaatcccGAGTCG
GGCAAGTTGGAAAAATGTCGGAAAGTTTTTGATAGCTAAGCACTTCTTTG
AATCATCATTTGCTACgagtttttatttacttaacccacattgagtcccg
tttgagttttttcatgtatccttattgaaattttccagTCGAAATTCGGC
GAcgcggtagggccaatacccCTGAGAGCCGAAAATAtttaaaacaaatt
catacTACAGTGTTTCAAGtgattttatttgctttggtaAATTGTTCCAA
GCCCTGNAGTTCAGACCATTTAGAAAAATCCAACAGCACATCTTGCAGCT
TTAATTCATGGCATTTCTTCACACATCCTTGATGGTTCTGGCAGATAATA
ATCAAGCTTAAAAGAATCTCCTCATAAGTGAAAAATGACACAACTTTCAG
TTTAAATTTCAATACTTCTGCAAGTAAAATGATCAAATCGGATTCATAAA
TTATAGTAAAAAGGGAATTTGGACCACCCAACAGTAATGTTTGTAACAAG
TGTACAGCAATATCTCTCAGCAATAAGTAGGCATCAGTGGCAATCTTTGA
GAAACGTAGCAACTCAACTAAAGCTTGTATAAGCATTTTATCTTTCCACA
GATATTTTTTGACCACTCGTATATCTTTTATACCAACCAAAAGGGCACCT
GAAAATAAATGTCTGTCAGTGATCGGTTTACTTTTTAACATATCAACAAC
ATCTTTAAGCGCCCGCTCAGCTATGTGCTGGCACAATGTATCATTGAGTG
CTGCATCAGGTAATTCATCATTGCAAAGGTCTAGTACACGAAAATCatgt
ttttcaaccaaaaaaagTACAAGCTCAGCAGCTTCATCAGGCGACTTCCC
TTCAATTAATTTGCTCAGTGACTCTCTTTTCTCCTCCTCCTCTGCCATGT
TCTTAATTCATTTCTCTat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056739-exon-scaffold_282-1491911889:246924..248193 | TCONS_00056739-exon-scaffold_282-1491911889:246924..248193 | Clytia hemisphaerica | exon |
| TCONS_00056739-exon-scaffold_282-1510915933:246924..248193 | TCONS_00056739-exon-scaffold_282-1510915933:246924..248193 | Clytia hemisphaerica | exon |
| TCONS_00056739-exon-scaffold_282-1575043694:246924..248193 | TCONS_00056739-exon-scaffold_282-1575043694:246924..248193 | Clytia hemisphaerica | exon |
| TCONS_00056739-exon-scaffold_282-1491911889:249314..249392 | TCONS_00056739-exon-scaffold_282-1491911889:249314..249392 | Clytia hemisphaerica | exon |
| TCONS_00056739-exon-scaffold_282-1510915933:249314..249392 | TCONS_00056739-exon-scaffold_282-1510915933:249314..249392 | Clytia hemisphaerica | exon |
| TCONS_00056739-exon-scaffold_282-1575043694:249314..249392 | TCONS_00056739-exon-scaffold_282-1575043694:249314..249392 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_282 | supercontig | scaffold_282:246924..249392 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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